Rroxscaffold_5G00373090

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000168
Physical Location & Seq
Reverse (-)
54351827 .. 54354071
2245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00373090.1

Sequence Viewer

Length: 1509 bp
ATGGATTTCTTGAATTGTATAATAGGTCTTTGTTTTGCCTGGATCACCAGCCAAGCGTTCTATCGTTTTGCAAGAAGAAGCAAAGCTGTACCCAGAAAGCTTCTTCCACCAGGACCAAAGCCATTTCCACTTGTCGGGAATCTGTTTGAGCTTGGAGACAAACCCCACCTCTCACTTACTAATCTTTCCCAACGCTATGGCCCCATCATAAGTTTGCAACTCGGCCGATTAACCACAGTAGTCATCTCTTCACCTACTCTGGCCAAAGAAATCCTCCGAACCCATGACCAAGTCTTCTGCAACCGACCCATCCGAGATGGAATCCACGCCTGCAAACACAGCGAGTACAGCATGGCCTGGATTCCTGTGTCAGCAAGATGGAGAAATCTTCGCAAAATATGCAACTTGCAATTGTTTTCCCCCAAAGTTCTTGATGCCAACCAAGCCAACCGACGCGTAAAGGTGCAAAAGCTCATCGATAATGTCAATGAAAGCATGAGGGCTGGTGAGGCAGTAGATATCGGAAGGGCTGCATTTACAACCGCGCTCAATTTGTTGTCGCAGACAATCTTCTCTGTGGATTTAGCTGACCCCAGTAGTGAGACAGCTAGGGAGTTCAAGGAGACTGTTTGGGGTATGTTTGAAGAGACAGGGAAACCAAACTTGGCGGACTATTTTCCTTTTCTTAGGAAACTAGACCCCCAAGGTATAAAGTGGCGCTTGACCTATCACTACCAGAAAATGCTAGAGATCTTTGATCGAATGATCCATCAAAGGCTGGAATCAAGAAAAGGGGACAGTTATATCACAGCCAATGATATGTTGGATACACTTTTGAACATCAGTAAAGAGAAAATGGAGGACATGGACATGCTCGAAACACAACATTTGTTCCTGGATTTATTTGCTGCAGGCACGGACACAAGTTCAGCCACATTGGAATGGGCAATGGCCGAGCTACTACGCAACCCCAAAATTCTTTCAGAAGCTCAAGCGGAACTTCAGCAAGTGATTGGAAAGGGGAAAGTAGTTGAGGAATCAGACATTGCTCGACTCCCTTACTTACAAGCAATAATCAAAGAAACATTTCGGGTGCACCCAACAGTTCCATTGCTACTTCCCCGGAAAGCAGAAGCAAACATAGAAATTGGCGGGTATGTAATCCCGAAGGGTGCTCAAGTTCTAATAAATGTTTGGGCCATAGGTAGAGACCCCATCACTTGGGAAAACCCAAATCTGTTTAAGCCGGAGAGGTTCTTGGGATTAGAAAATCAAATTGATGTTATGGGAAAAAACTTCGAGCTTACTCCGTTTGGTGGTGGGAGAAGAATATGTCCCGGACTTCCATTGGCAATAAGAATGTTACACTTGATGCTGGGTTCACTAATTAACTGCTTTGATTGGAACCTTGAAGATGGAGTTGTACCCGAGACTATGAACATGGCAGAGAAGTTTGGCCTTACCCTACAAATGGCACAACCACTAAGAGCTGTGCCCAAGAAGTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

502

Amino Acids

56.93

Weight (kDa)

8.81

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 487 8e-104 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1221
AccII CGCG 2 cut(s) 456, 545
AciI CCGC 4 cut(s) 543, 668, 995, 1152
AclWI GGATC 2 cut(s) 50, 760
AcoI YGGCCR 3 cut(s) 223, 261, 951
AcsI RAATTY 1 cut(s) 975
AcuI CTGAAG 1 cut(s) 986
AfaI GTAC 3 cut(s) 90, 347, 1425
AfiI CCNNNNNNNGG 4 cut(s) 134, 1221, 1316, 1471
AflIII ACRYGT 1 cut(s) 454
AgsI TTSAA 5 cut(s) 13, 619, 644, 838, 1412
AjnI CCWGG 4 cut(s) 38, 109, 356, 894
AjuI GAANNNNNNNTTGG 2 cut(s) 647, 679
Alw21I GWGCWC 2 cut(s) 1098, 1177
Alw26I GTCTC 6 cut(s) 150, 596, 617, 641, 1203, 1424
Alw44I GTGCAC 1 cut(s) 1094
AlwI GGATC 2 cut(s) 50, 760
Ama87I CYCGRG 1 cut(s) 1427
AoxI GGCC 7 cut(s) 199, 223, 261, 354, 951, 1197, 1456
ApaLI GTGCAC 1 cut(s) 1094
ApeKI GCWGC 2 cut(s) 530, 908
ApoI RAATTY 1 cut(s) 975
Asp700I GAANNNNTTC 1 cut(s) 1086
AspLEI GCGC 2 cut(s) 547, 720
AspS9I GGNCC 3 cut(s) 113, 200, 1197
AsuC2I CCSGG 2 cut(s) 1123, 1338
AsuHPI GGTGA 3 cut(s) 37, 243, 518
AvaI CYCGRG 1 cut(s) 1427
AvaII GGWCC 1 cut(s) 113
BaeGI GKGCMC 2 cut(s) 1098, 1497
BalI TGGCCA 1 cut(s) 263
BbsI GAAGAC 1 cut(s) 286
Bbv12I GWGCWC 2 cut(s) 1098, 1177
BbvI GCAGC 2 cut(s) 517, 895
BccI CCATC 7 cut(s) 212, 311, 317, 372, 777, 1223, 1409
BciT130I CCWGG 4 cut(s) 40, 111, 358, 896
BciVI GTATCC 1 cut(s) 820
BcnI CCSGG 2 cut(s) 1123, 1338
BcoDI GTCTC 6 cut(s) 150, 596, 617, 641, 1203, 1424
BfaI CTAG 3 cut(s) 609, 695, 746
BfmI CTRYAG 1 cut(s) 909
BfoI RGCGCY 1 cut(s) 721
BfuI GTATCC 1 cut(s) 820
BglII AGATCT 1 cut(s) 750
BisI GCNGC 2 cut(s) 531, 909
BlsI GCNGC 2 cut(s) 532, 910
Bme1390I CCNGG 6 cut(s) 40, 111, 358, 896, 1123, 1338
Bme18I GGWCC 1 cut(s) 113
BmeT110I CYCGRG 1 cut(s) 1427
BmgT120I GGNCC 3 cut(s) 113, 200, 1197
BmiI GGNNCC 2 cut(s) 202, 1406
BmrFI CCNGG 6 cut(s) 40, 111, 358, 896, 1123, 1338
BmrI ACTGGG 1 cut(s) 588
BmsI GCATC 2 cut(s) 424, 1362
BmuI ACTGGG 1 cut(s) 588
BpiI GAAGAC 1 cut(s) 286
BpuEI CTTGAG 2 cut(s) 975, 1161
BpuMI CCSGG 2 cut(s) 1123, 1338
Bsa29I ATCGAT 1 cut(s) 477
BsaI GGTCTC 1 cut(s) 1203
BsaJI CCNNGG 2 cut(s) 703, 1121
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 1221, 1316, 1471
Bse1I ACTGG 1 cut(s) 594
Bse3DI GCAATG 3 cut(s) 954, 1044, 1109
BseBI CCWGG 4 cut(s) 40, 111, 358, 896
BseCI ATCGAT 1 cut(s) 477
BseDI CCNNGG 2 cut(s) 703, 1121
BseGI GGATG 1 cut(s) 309
BseLI CCNNNNNNNGG 4 cut(s) 134, 1221, 1316, 1471
BseMI GCAATG 3 cut(s) 954, 1044, 1109
BseNI ACTGG 1 cut(s) 594
BseSI GKGCMC 2 cut(s) 1098, 1497
BseX3I CGGCCG 1 cut(s) 223
BseXI GCAGC 2 cut(s) 517, 895
BseYI CCCAGC 1 cut(s) 1375
Bsh1236I CGCG 2 cut(s) 456, 545
Bsh1285I CGRYCG 1 cut(s) 226
BshFI GGCC 7 cut(s) 201, 225, 263, 356, 953, 1199, 1458
BshVI ATCGAT 1 cut(s) 477
BsiEI CGRYCG 1 cut(s) 226
BsiHKAI GWGCWC 2 cut(s) 1098, 1177
BsiHKCI CYCGRG 1 cut(s) 1427
BsiSI CCGG 3 cut(s) 1123, 1247, 1338
BslFI GGGAC 2 cut(s) 809, 1320
BslI CCNNNNNNNGG 4 cut(s) 134, 1221, 1316, 1471
BsmAI GTCTC 6 cut(s) 150, 596, 617, 641, 1203, 1424
BsmFI GGGAC 2 cut(s) 809, 1320
BsnI GGCC 7 cut(s) 201, 225, 263, 356, 953, 1199, 1458
Bso31I GGTCTC 1 cut(s) 1203
BsoBI CYCGRG 1 cut(s) 1427
Bsp1286I GDGCHC 3 cut(s) 1098, 1177, 1497
Bsp143I GATC 4 cut(s) 42, 750, 757, 765
BspACI CCGC 4 cut(s) 543, 668, 995, 1152
BspANI GGCC 7 cut(s) 201, 225, 263, 356, 953, 1199, 1458
BspDI ATCGAT 1 cut(s) 477
BspFNI CGCG 2 cut(s) 456, 545
BspLI GGNNCC 2 cut(s) 202, 1406
BspMAI CTGCAG 1 cut(s) 913
BspPI GGATC 2 cut(s) 50, 760
BspTNI GGTCTC 1 cut(s) 1203
BsrDI GCAATG 3 cut(s) 954, 1044, 1109
BsrI ACTGG 1 cut(s) 594
BssECI CCNNGG 2 cut(s) 703, 1121
BssMI GATC 4 cut(s) 42, 750, 757, 765
BssT1I CCWWGG 1 cut(s) 703
Bst2UI CCWGG 4 cut(s) 40, 111, 358, 896
Bst4CI ACNGT 4 cut(s) 238, 628, 800, 1105
Bst6I CTCTTC 2 cut(s) 253, 639
BstAPI GCANNNNNTGC 1 cut(s) 399
BstC8I GCNNGC 2 cut(s) 331, 913
BstDEI CTNAG 2 cut(s) 686, 1484
BstF5I GGATG 1 cut(s) 309
BstFNI CGCG 2 cut(s) 456, 545
BstH2I RGCGCY 1 cut(s) 721
BstHHI GCGC 2 cut(s) 547, 720
BstKTI GATC 4 cut(s) 45, 753, 760, 768
BstMAI GTCTC 6 cut(s) 150, 596, 617, 641, 1203, 1424
BstMBI GATC 4 cut(s) 42, 750, 757, 765
BstMCI CGRYCG 1 cut(s) 226
BstMWI GCNNNNNNNGC 5 cut(s) 339, 348, 399, 443, 509
BstNI CCWGG 4 cut(s) 40, 111, 358, 896
BstNSI RCATGY 1 cut(s) 874
BstSCI CCNGG 6 cut(s) 38, 109, 356, 894, 1121, 1336
BstSFI CTRYAG 1 cut(s) 909
BstSLI GKGCMC 2 cut(s) 1098, 1497
BstUI CGCG 2 cut(s) 456, 545
BstV1I GCAGC 2 cut(s) 517, 895
BstV2I GAAGAC 1 cut(s) 286
BstX2I RGATCY 1 cut(s) 750
BstXI CCANNNNNNTGG 1 cut(s) 197
BstYI RGATCY 1 cut(s) 750
BstZI CGGCCG 1 cut(s) 223
Bsu15I ATCGAT 1 cut(s) 477
BsuI GTATCC 1 cut(s) 820
BsuRI GGCC 7 cut(s) 201, 225, 263, 356, 953, 1199, 1458
BsuTUI ATCGAT 1 cut(s) 477
BtsCI GGATG 1 cut(s) 309
Cac8I GCNNGC 2 cut(s) 331, 913
CfoI GCGC 2 cut(s) 547, 720
Cfr13I GGNCC 3 cut(s) 113, 200, 1197
ClaI ATCGAT 1 cut(s) 477
CseI GACGC 1 cut(s) 462
Csp6I GTAC 3 cut(s) 89, 346, 1424
CviAII CATG 6 cut(s) 284, 352, 496, 865, 871, 1441
CviQI GTAC 3 cut(s) 89, 346, 1424
DdeI CTNAG 2 cut(s) 686, 1484
DpnI GATC 4 cut(s) 44, 752, 759, 767
DpnII GATC 4 cut(s) 42, 750, 757, 765
EaeI YGGCCR 3 cut(s) 223, 261, 951
EagI CGGCCG 1 cut(s) 223
Eam1104I CTCTTC 2 cut(s) 253, 639
EarI CTCTTC 2 cut(s) 253, 639
EciI GGCGGA 1 cut(s) 683
EclXI CGGCCG 1 cut(s) 223
Eco130I CCWWGG 1 cut(s) 703
Eco31I GGTCTC 1 cut(s) 1203
Eco32I GATATC 1 cut(s) 520
Eco47I GGWCC 1 cut(s) 113
Eco52I CGGCCG 1 cut(s) 223
Eco57I CTGAAG 1 cut(s) 986
Eco88I CYCGRG 1 cut(s) 1427
EcoRII CCWGG 4 cut(s) 38, 109, 356, 894
EcoRV GATATC 1 cut(s) 520
EcoT14I CCWWGG 1 cut(s) 703
ErhI CCWWGG 1 cut(s) 703
FaeI CATG 6 cut(s) 287, 355, 499, 868, 874, 1444
FalI AAGNNNNNCTT 4 cut(s) 704, 736, 984, 1016
FaqI GGGAC 2 cut(s) 809, 1320
FatI CATG 6 cut(s) 283, 351, 495, 864, 870, 1440
FauI CCCGC 1 cut(s) 1145
Fnu4HI GCNGC 2 cut(s) 531, 909
FokI GGATG 1 cut(s) 296
Fsp4HI GCNGC 2 cut(s) 531, 909
FspBI CTAG 3 cut(s) 609, 695, 746
GlaI GCGC 2 cut(s) 546, 719
GluI GCNGC 2 cut(s) 531, 909
GsaI CCCAGC 1 cut(s) 1379
HaeII RGCGCY 1 cut(s) 721
HaeIII GGCC 7 cut(s) 201, 225, 263, 356, 953, 1199, 1458
HapII CCGG 3 cut(s) 1123, 1247, 1338
HgaI GACGC 1 cut(s) 462
HhaI GCGC 2 cut(s) 547, 720
Hin1II CATG 6 cut(s) 287, 355, 499, 868, 874, 1444
Hin6I GCGC 2 cut(s) 545, 718
HinP1I GCGC 2 cut(s) 545, 718
HindIII AAGCTT 1 cut(s) 98
HinfI GANTC 6 cut(s) 139, 321, 361, 782, 1037, 1053
HpaII CCGG 3 cut(s) 1123, 1247, 1338
HphI GGTGA 3 cut(s) 37, 243, 518
Hpy166II GTNNAC 2 cut(s) 1096, 1382
Hpy188I TCNGA 5 cut(s) 278, 314, 524, 985, 1042
Hpy188III TCNNGA 5 cut(s) 10, 136, 431, 786, 1165
Hpy8I GTNNAC 2 cut(s) 1096, 1382
Hpy99I CGWCG 1 cut(s) 456
HpyAV CCTTC 2 cut(s) 519, 1162
HpyCH4III ACNGT 4 cut(s) 238, 628, 800, 1105
HpyF10VI GCNNNNNNNGC 5 cut(s) 339, 348, 399, 443, 509
HpyF3I CTNAG 2 cut(s) 686, 1484
Hsp92II CATG 6 cut(s) 287, 355, 499, 868, 874, 1444
HspAI GCGC 2 cut(s) 545, 718
Kzo9I GATC 4 cut(s) 42, 750, 757, 765
Lsp1109I GCAGC 2 cut(s) 517, 895
LweI GCATC 2 cut(s) 424, 1362
MaeI CTAG 3 cut(s) 609, 695, 746
MaeIII GTNAC 1 cut(s) 1362
MalI GATC 4 cut(s) 44, 752, 759, 767
MboI GATC 4 cut(s) 42, 750, 757, 765
MboII GAAGA 9 cut(s) 87, 95, 240, 286, 380, 562, 656, 1338, 1424
MfeI CAATTG 1 cut(s) 410
MflI RGATCY 1 cut(s) 750
MhlI GDGCHC 3 cut(s) 1098, 1177, 1497
MlsI TGGCCA 1 cut(s) 263
MluCI AATT 7 cut(s) 13, 410, 550, 975, 1146, 1275, 1386
MluI ACGCGT 1 cut(s) 454
MluNI TGGCCA 1 cut(s) 263
MlyI GAGTC 1 cut(s) 1047
MmeI TCCRAC 1 cut(s) 804
MnlI CCTC 7 cut(s) 179, 284, 492, 502, 853, 1027, 1245
Mox20I TGGCCA 1 cut(s) 263
MroXI GAANNNNTTC 1 cut(s) 1086
MscI TGGCCA 1 cut(s) 263
MseI TTAA 3 cut(s) 230, 1242, 1389
MslI CAYNNNNRTG 2 cut(s) 869, 940
Msp20I TGGCCA 1 cut(s) 263
MspI CCGG 3 cut(s) 1123, 1247, 1338
MspR9I CCNGG 6 cut(s) 40, 111, 358, 896, 1123, 1338
MunI CAATTG 1 cut(s) 410
MvaI CCWGG 4 cut(s) 40, 111, 358, 896
MvnI CGCG 2 cut(s) 456, 545
MwoI GCNNNNNNNGC 5 cut(s) 339, 348, 399, 443, 509
NciI CCSGG 2 cut(s) 1123, 1338
NdeII GATC 4 cut(s) 42, 750, 757, 765
NlaIII CATG 6 cut(s) 287, 355, 499, 868, 874, 1444
NlaIV GGNNCC 2 cut(s) 202, 1406
NmeAIII GCCGAG 2 cut(s) 201, 979
NspI RCATGY 1 cut(s) 874
PdmI GAANNNNTTC 1 cut(s) 1086
PfeI GAWTC 5 cut(s) 139, 321, 361, 782, 1037
PflFI GACNNNGTC 1 cut(s) 290
PflMI CCANNNNNTGG 1 cut(s) 1221
PfoI TCCNGGA 2 cut(s) 894, 1336
PkrI GCNGC 2 cut(s) 532, 910
PleI GAGTC 1 cut(s) 1047
PpsI GAGTC 1 cut(s) 1047
Psp6I CCWGG 4 cut(s) 38, 109, 356, 894
PspFI CCCAGC 1 cut(s) 1375
PspGI CCWGG 4 cut(s) 38, 109, 356, 894
PspN4I GGNNCC 2 cut(s) 202, 1406
PspPI GGNCC 3 cut(s) 113, 200, 1197
PstI CTGCAG 1 cut(s) 913
PsuI RGATCY 1 cut(s) 750
PsyI GACNNNGTC 1 cut(s) 290
RsaI GTAC 3 cut(s) 90, 347, 1425
RsaNI GTAC 3 cut(s) 89, 346, 1424
RseI CAYNNNNRTG 2 cut(s) 869, 940
SaqAI TTAA 3 cut(s) 230, 1242, 1389
SatI GCNGC 2 cut(s) 531, 909
Sau3AI GATC 4 cut(s) 42, 750, 757, 765
Sau96I GGNCC 3 cut(s) 113, 200, 1197
SchI GAGTC 1 cut(s) 1047
ScrFI CCNGG 6 cut(s) 40, 111, 358, 896, 1123, 1338
SduI GDGCHC 3 cut(s) 1098, 1177, 1497
SfaNI GCATC 2 cut(s) 424, 1362
SfcI CTRYAG 1 cut(s) 909
SinI GGWCC 1 cut(s) 113
SmiMI CAYNNNNRTG 2 cut(s) 869, 940
SmlI CTYRAG 2 cut(s) 990, 1176
SmoI CTYRAG 2 cut(s) 990, 1176
Sse9I AATT 7 cut(s) 13, 410, 550, 975, 1146, 1275, 1386
SsiI CCGC 4 cut(s) 543, 668, 995, 1152
SspMI CTAG 3 cut(s) 609, 695, 746
StyD4I CCNGG 6 cut(s) 38, 109, 356, 894, 1121, 1336
StyI CCWWGG 1 cut(s) 703
TaaI ACNGT 4 cut(s) 238, 628, 800, 1105
TaqI TCGA 5 cut(s) 477, 760, 876, 1051, 1299
TasI AATT 7 cut(s) 13, 410, 550, 975, 1146, 1275, 1386
TatI WGTACW 1 cut(s) 345
TfiI GAWTC 5 cut(s) 139, 321, 361, 782, 1037
Tru1I TTAA 3 cut(s) 230, 1242, 1389
Tru9I TTAA 3 cut(s) 230, 1242, 1389
TseI GCWGC 2 cut(s) 530, 908
TspDTI ATGAA 2 cut(s) 504, 1451
TspGWI ACGGA 2 cut(s) 932, 1299
Tth111I GACNNNGTC 1 cut(s) 290
Van91I CCANNNNNTGG 1 cut(s) 1221
VneI GTGCAC 1 cut(s) 1094
VpaK11BI GGWCC 1 cut(s) 113
XapI RAATTY 1 cut(s) 975
XceI RCATGY 1 cut(s) 874
XcmI CCANNNNNNNNNTGG 1 cut(s) 820
XmnI GAANNNNTTC 1 cut(s) 1086
XspI CTAG 3 cut(s) 609, 695, 746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.