Rw4G026220

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000168
Physical Location & Seq
Forward (+)
52371936 .. 52373614
1679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G026220.1

Sequence Viewer

Length: 1500 bp
ATGGATTACTTGTCTAGTATACTGTTGTGTCTCTGCTTTATCTCCTGTTTCTTAATCCAAGCCCTCCATAGAAGAACCAGAGTTAGACTTCCACCAGGACCAAAGCCATTTCCATTGATTGGAAATCTGTTTGAGCTTGGAGACAAACCTCATCTCTCTTTGACCAAGCTTTCACAACACTATGGCCCCATAATGTTTTTGAAACTAGGCTGGATAACCACTATTGTAGTTTCTTCATCAACCATGGCCAAAGAAATCCTCCAGACCAATGACCAACTCTTTTGCAACCGAACAATCCCAGATGCATTGCGAGACATAGGAGACTACAGCTTGCCTTGGATACCAGTATCAACAAGGTGGAGAAATCTTCGAAAAATATGCACCTCCCACCTCTTCAACACCAAAGTACTTGATGCCAACCAAGAAAACCGGCGAGTGAAAGTGCACGAGCTCATAGCTAGTGTCAATGACAGCATGGTAAAGGGTTTGTCAGTAGATATTGGAAAGGCTGCTTTCAAAACTGCACTCAATTTGCTGTCGAGAACTATTTTCTCTGTGGATTTGGCTGATGACTCGAGTAGTAGTAGTGAGATGACTAGAGAGTTCAAGAAGATTGTTAATGGTATGTTGGAAGAGGCTGGGAAGCCGAATTTGGGGGACTATTTTCCTGTGCTTAAGAATATTGATCCCCAAGGCATAAGGCGACGCTTTACGAATTACTACAAAAAGATGTTAGGCTTGATTGAATCAGTGATCAGTCAACGGTTGGAATGTAGAAAAGGGGATGATTATGTGACAAGTAATGATATGTTGGATACTCTTATAAACCTCAGTGAAGAGAAAAATGAGGAGGATTTGAAGAACTCCGAAGTAGTTGAAAATTTGTTTGTGGCTCTATTTGCTGCGGGGACAGATACAACTTCAGCCACATTGGAATGGGCAATGGCGGAGCTACTACACAACCCAGAGAGCCTTTCTAAAGCTCAAGAAGAGCTAGATCAAATGGTTGGAAAAGGAAAACCAATCGAGGAATCCGACATTGCTAGACTCCCTTACTTACAAGCAATAATCATGGAAACCTTCCGGTTGCACCCAGTGGCTCCATTGCTACTGCCACGAAAAGCTGAAACAGATGTAGAAATAGGGGGCTACATTGTCCCGAAGGGTGCACAAGTTCTAGTTAATGTTTGGGCCATAGGCCGAGACGCCGGCATTTGGGACAGTCCAAACTCTTTTATGCCGGAGAGGTTCTTAGGATTACCCAACCAAATTGATGTTATGGGAAAAAACTTTGGGCTTATTCCATTTGGTGGTGGAAGGAGAATCTGTCCAGGTTTGCCATTGGCAATGAGAATGTTGCACTTGATGTTGGGTTCGCTCATCAACTGCTTCGATTGGAAGCTTGAAGATGGGGTTGTACCTGAGACTATGAACATGGAAGACAAGTTTGGCCTCACTATACAAATGGCTCAGCCTCTCAAAGCTGTTCCCTACTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

499

Amino Acids

56.01

Weight (kDa)

6.14

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 31 - 487 5.5e-101 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 824
AccB7I CCANNNNNTGG 2 cut(s) 119, 1310
AccI GTMKAC 1 cut(s) 19
AciI CCGC 2 cut(s) 905, 947
AclWI GGATC 1 cut(s) 680
AcoI YGGCCR 1 cut(s) 246
AcsI RAATTY 2 cut(s) 649, 880
AcuI CTGAAG 1 cut(s) 906
AcyI GRCGYC 1 cut(s) 1206
AdeI CACNNNGTG 1 cut(s) 1096
AfaI GTAC 2 cut(s) 408, 1419
AfiI CCNNNNNNNGG 4 cut(s) 119, 653, 1215, 1310
AflII CTTAAG 1 cut(s) 674
AgsI TTSAA 8 cut(s) 202, 397, 517, 607, 746, 859, 878, 1406
AjnI CCWGG 2 cut(s) 94, 1330
AjuI GAANNNNNNNTTGG 4 cut(s) 635, 667, 1431, 1463
Alw21I GWGCWC 3 cut(s) 447, 453, 1171
Alw26I GTCTC 6 cut(s) 35, 135, 306, 315, 1197, 1418
Alw44I GTGCAC 2 cut(s) 443, 1167
AlwI GGATC 1 cut(s) 680
Ama87I CYCGRG 1 cut(s) 574
AoxI GGCC 5 cut(s) 184, 246, 1191, 1198, 1450
ApaLI GTGCAC 2 cut(s) 443, 1167
ApeKI GCWGC 2 cut(s) 509, 902
ApoI RAATTY 2 cut(s) 649, 880
AspS9I GGNCC 3 cut(s) 98, 185, 1191
AsuII TTCGAA 1 cut(s) 370
AvaI CYCGRG 1 cut(s) 574
AvaII GGWCC 1 cut(s) 98
BaeGI GKGCMC 2 cut(s) 447, 1171
BalI TGGCCA 1 cut(s) 248
BanII GRGCYC 1 cut(s) 453
BauI CACGAG 1 cut(s) 446
BbsI GAAGAC 1 cut(s) 1446
Bbv12I GWGCWC 3 cut(s) 447, 453, 1171
BbvI GCAGC 2 cut(s) 496, 889
BccI CCATC 1 cut(s) 1403
BcgI CGANNNNNNTGC 2 cut(s) 360, 394
BciT130I CCWGG 2 cut(s) 96, 1332
BciVI GTATCC 2 cut(s) 333, 808
BclI TGATCA 1 cut(s) 753
BcoDI GTCTC 6 cut(s) 35, 135, 306, 315, 1197, 1418
BfaI CTAG 7 cut(s) 15, 206, 459, 597, 995, 1044, 1178
BfmI CTRYAG 1 cut(s) 325
BfrI CTTAAG 1 cut(s) 674
BfuI GTATCC 2 cut(s) 333, 808
BisI GCNGC 2 cut(s) 510, 903
BlpI GCTNAGC 1 cut(s) 1470
BlsI GCNGC 2 cut(s) 511, 904
BmcAI AGTACT 1 cut(s) 408
Bme1390I CCNGG 2 cut(s) 96, 1332
Bme18I GGWCC 1 cut(s) 98
BmeT110I CYCGRG 1 cut(s) 574
BmgT120I GGNCC 3 cut(s) 98, 185, 1191
BmiI GGNNCC 2 cut(s) 187, 1101
BmrFI CCNGG 2 cut(s) 96, 1332
BmrI ACTGGG 1 cut(s) 1088
BmsI GCATC 2 cut(s) 292, 403
BmuI ACTGGG 1 cut(s) 1088
BpiI GAAGAC 1 cut(s) 1446
BpmI CTGGAG 1 cut(s) 245
Bpu1102I GCTNAGC 1 cut(s) 1470
Bpu14I TTCGAA 1 cut(s) 370
BpuEI CTTGAG 1 cut(s) 969
BsaHI GRCGYC 1 cut(s) 1206
BsaJI CCNNGG 3 cut(s) 243, 335, 691
BsaWI WCCGGW 1 cut(s) 1083
BsaXI ACNNNNNCTCC 2 cut(s) 1312, 1342
Bsc4I CCNNNNNNNGG 4 cut(s) 119, 653, 1215, 1310
Bse118I RCCGGY 2 cut(s) 429, 1208
Bse1I ACTGG 2 cut(s) 344, 1094
Bse3DI GCAATG 5 cut(s) 305, 948, 1038, 1103, 1353
BseBI CCWGG 2 cut(s) 96, 1332
BseDI CCNNGG 3 cut(s) 243, 335, 691
BseGI GGATG 1 cut(s) 790
BseLI CCNNNNNNNGG 4 cut(s) 119, 653, 1215, 1310
BseMI GCAATG 5 cut(s) 305, 948, 1038, 1103, 1353
BseMII CTCAG 3 cut(s) 844, 1413, 1484
BseNI ACTGG 2 cut(s) 344, 1094
BseRI GAGGAG 1 cut(s) 863
BseSI GKGCMC 2 cut(s) 447, 1171
BseXI GCAGC 2 cut(s) 496, 889
BseYI CCCAGC 1 cut(s) 638
BsgI GTGCAG 1 cut(s) 507
BshFI GGCC 5 cut(s) 186, 248, 1193, 1200, 1452
BsiHKAI GWGCWC 3 cut(s) 447, 453, 1171
BsiHKCI CYCGRG 1 cut(s) 574
BsiSI CCGG 4 cut(s) 430, 1084, 1209, 1241
BslFI GGGAC 4 cut(s) 671, 922, 1142, 1232
BslI CCNNNNNNNGG 4 cut(s) 119, 653, 1215, 1310
BsmAI GTCTC 6 cut(s) 35, 135, 306, 315, 1197, 1418
BsmBI CGTCTC 1 cut(s) 1197
BsmFI GGGAC 4 cut(s) 671, 922, 1142, 1232
BsnI GGCC 5 cut(s) 186, 248, 1193, 1200, 1452
BsoBI CYCGRG 1 cut(s) 574
Bsp119I TTCGAA 1 cut(s) 370
Bsp1286I GDGCHC 3 cut(s) 447, 453, 1171
Bsp143I GATC 3 cut(s) 685, 753, 997
Bsp1720I GCTNAGC 1 cut(s) 1470
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 2 cut(s) 905, 947
BspANI GGCC 5 cut(s) 186, 248, 1193, 1200, 1452
BspCNI CTCAG 3 cut(s) 843, 1414, 1483
BspLI GGNNCC 2 cut(s) 187, 1101
BspPI GGATC 1 cut(s) 680
BspQI GCTCTTC 1 cut(s) 984
BspT104I TTCGAA 1 cut(s) 370
BspTI CTTAAG 1 cut(s) 674
BsrDI GCAATG 5 cut(s) 305, 948, 1038, 1103, 1353
BsrFI RCCGGY 2 cut(s) 429, 1208
BsrI ACTGG 2 cut(s) 344, 1094
BssAI RCCGGY 2 cut(s) 429, 1208
BssECI CCNNGG 3 cut(s) 243, 335, 691
BssMI GATC 3 cut(s) 685, 753, 997
BssNAI GTATAC 1 cut(s) 20
BssNI GRCGYC 1 cut(s) 1206
BssSI CACGAG 1 cut(s) 446
BssT1I CCWWGG 3 cut(s) 243, 335, 691
Bst1107I GTATAC 1 cut(s) 20
Bst2BI CACGAG 1 cut(s) 446
Bst2UI CCWGG 2 cut(s) 96, 1332
Bst4CI ACNGT 3 cut(s) 24, 765, 1223
Bst6I CTCTTC 4 cut(s) 398, 627, 831, 984
BstACI GRCGYC 1 cut(s) 1206
BstAFI CTTAAG 1 cut(s) 674
BstBI TTCGAA 1 cut(s) 370
BstC8I GCNNGC 2 cut(s) 332, 1210
BstDEI CTNAG 4 cut(s) 830, 1252, 1422, 1470
BstDSI CCRYGG 1 cut(s) 243
BstF5I GGATG 1 cut(s) 790
BstKTI GATC 3 cut(s) 688, 756, 1000
BstMAI GTCTC 6 cut(s) 35, 135, 306, 315, 1197, 1418
BstMBI GATC 3 cut(s) 685, 753, 997
BstMWI GCNNNNNNNGC 1 cut(s) 899
BstNI CCWGG 2 cut(s) 96, 1332
BstSCI CCNGG 2 cut(s) 94, 1330
BstSFI CTRYAG 1 cut(s) 325
BstSLI GKGCMC 2 cut(s) 447, 1171
BstV1I GCAGC 2 cut(s) 496, 889
BstV2I GAAGAC 1 cut(s) 1446
BstZ17I GTATAC 1 cut(s) 20
BsuI GTATCC 2 cut(s) 333, 808
BsuRI GGCC 5 cut(s) 186, 248, 1193, 1200, 1452
BtgI CCRYGG 1 cut(s) 243
BtsCI GGATG 1 cut(s) 790
BtsIMutI CAGTG 3 cut(s) 756, 838, 1101
Cac8I GCNNGC 2 cut(s) 332, 1210
Cfr10I RCCGGY 2 cut(s) 429, 1208
Cfr13I GGNCC 3 cut(s) 98, 185, 1191
CseI GACGC 2 cut(s) 714, 1214
Csp6I GTAC 2 cut(s) 407, 1418
CviAII CATG 4 cut(s) 244, 475, 1072, 1435
CviQI GTAC 2 cut(s) 407, 1418
DdeI CTNAG 4 cut(s) 830, 1252, 1422, 1470
DpnI GATC 3 cut(s) 687, 755, 999
DpnII GATC 3 cut(s) 685, 753, 997
DraIII CACNNNGTG 1 cut(s) 1096
EaeI YGGCCR 1 cut(s) 246
Eam1104I CTCTTC 4 cut(s) 398, 627, 831, 984
EarI CTCTTC 4 cut(s) 398, 627, 831, 984
EciI GGCGGA 1 cut(s) 962
Ecl136II GAGCTC 1 cut(s) 451
Eco130I CCWWGG 3 cut(s) 243, 335, 691
Eco24I GRGCYC 1 cut(s) 453
Eco47I GGWCC 1 cut(s) 98
Eco53kI GAGCTC 1 cut(s) 451
Eco57I CTGAAG 1 cut(s) 906
Eco88I CYCGRG 1 cut(s) 574
EcoICRI GAGCTC 1 cut(s) 451
EcoRII CCWGG 2 cut(s) 94, 1330
EcoT14I CCWWGG 3 cut(s) 243, 335, 691
EcoT22I ATGCAT 1 cut(s) 307
EcoT38I GRGCYC 1 cut(s) 453
ErhI CCWWGG 3 cut(s) 243, 335, 691
Esp3I CGTCTC 1 cut(s) 1197
FaeI CATG 4 cut(s) 247, 478, 1075, 1438
FaqI GGGAC 4 cut(s) 671, 922, 1142, 1232
FatI CATG 4 cut(s) 243, 474, 1071, 1434
FauI CCCGC 1 cut(s) 898
FbaI TGATCA 1 cut(s) 753
FblI GTMKAC 1 cut(s) 19
Fnu4HI GCNGC 2 cut(s) 510, 903
FokI GGATG 1 cut(s) 797
FriOI GRGCYC 1 cut(s) 453
Fsp4HI GCNGC 2 cut(s) 510, 903
FspBI CTAG 7 cut(s) 15, 206, 459, 597, 995, 1044, 1178
GluI GCNGC 2 cut(s) 510, 903
GsaI CCCAGC 1 cut(s) 642
GsuI CTGGAG 1 cut(s) 245
HaeIII GGCC 5 cut(s) 186, 248, 1193, 1200, 1452
HapII CCGG 4 cut(s) 430, 1084, 1209, 1241
HgaI GACGC 2 cut(s) 714, 1214
Hin1I GRCGYC 1 cut(s) 1206
Hin1II CATG 4 cut(s) 247, 478, 1075, 1438
HincII GTYRAC 1 cut(s) 761
HindII GTYRAC 1 cut(s) 761
HindIII AAGCTT 2 cut(s) 167, 1400
HinfI GANTC 5 cut(s) 572, 746, 1031, 1047, 1323
HpaII CCGG 4 cut(s) 430, 1084, 1209, 1241
Hpy166II GTNNAC 4 cut(s) 20, 445, 761, 1169
Hpy188I TCNGA 2 cut(s) 868, 1036
Hpy188III TCNNGA 5 cut(s) 262, 540, 607, 986, 1159
Hpy8I GTNNAC 4 cut(s) 20, 445, 761, 1169
Hpy99I CGWCG 1 cut(s) 708
HpyAV CCTTC 3 cut(s) 1090, 1156, 1311
HpyCH4III ACNGT 3 cut(s) 24, 765, 1223
HpyCH4V TGCA 8 cut(s) 285, 305, 381, 445, 524, 1090, 1169, 1360
HpyF10VI GCNNNNNNNGC 1 cut(s) 899
HpyF3I CTNAG 4 cut(s) 830, 1252, 1422, 1470
Hsp92I GRCGYC 1 cut(s) 1206
Hsp92II CATG 4 cut(s) 247, 478, 1075, 1438
KroI GCCGGC 1 cut(s) 1208
KroNI GCCGGC 1 cut(s) 1210
Ksp22I TGATCA 1 cut(s) 753
Kzo9I GATC 3 cut(s) 685, 753, 997
LguI GCTCTTC 1 cut(s) 984
LmnI GCTCC 2 cut(s) 949, 1105
Lsp1109I GCAGC 2 cut(s) 496, 889
LweI GCATC 2 cut(s) 292, 403
MaeI CTAG 7 cut(s) 15, 206, 459, 597, 995, 1044, 1178
MaeIII GTNAC 1 cut(s) 793
MalI GATC 3 cut(s) 687, 755, 999
MboI GATC 3 cut(s) 685, 753, 997
MhlI GDGCHC 3 cut(s) 447, 453, 1171
MlsI TGGCCA 1 cut(s) 248
MluCI AATT 5 cut(s) 529, 649, 715, 880, 1269
MluNI TGGCCA 1 cut(s) 248
MlyI GAGTC 2 cut(s) 566, 1041
MmeI TCCRAC 5 cut(s) 609, 747, 792, 988, 1059
Mox20I TGGCCA 1 cut(s) 248
Mph1103I ATGCAT 1 cut(s) 307
MroNI GCCGGC 1 cut(s) 1208
MscI TGGCCA 1 cut(s) 248
MseI TTAA 4 cut(s) 53, 618, 675, 1182
MslI CAYNNNNRTG 1 cut(s) 934
Msp20I TGGCCA 1 cut(s) 248
MspCI CTTAAG 1 cut(s) 674
MspI CCGG 4 cut(s) 430, 1084, 1209, 1241
MspR9I CCNGG 2 cut(s) 96, 1332
MvaI CCWGG 2 cut(s) 96, 1332
MwoI GCNNNNNNNGC 1 cut(s) 899
NaeI GCCGGC 1 cut(s) 1210
NcoI CCATGG 1 cut(s) 243
NdeII GATC 3 cut(s) 685, 753, 997
NgoMIV GCCGGC 1 cut(s) 1208
NlaIII CATG 4 cut(s) 247, 478, 1075, 1438
NlaIV GGNNCC 2 cut(s) 187, 1101
NmeAIII GCCGAG 1 cut(s) 1226
NmuCI GTSAC 1 cut(s) 793
NsiI ATGCAT 1 cut(s) 307
NspV TTCGAA 1 cut(s) 370
PaeR7I CTCGAG 1 cut(s) 574
PciSI GCTCTTC 1 cut(s) 984
PcsI WCGNNNNNNNCGW 1 cut(s) 1032
PdiI GCCGGC 1 cut(s) 1210
PfeI GAWTC 3 cut(s) 746, 1031, 1323
PflMI CCANNNNNTGG 2 cut(s) 119, 1310
PkrI GCNGC 2 cut(s) 511, 904
PleI GAGTC 2 cut(s) 566, 1041
PpsI GAGTC 2 cut(s) 566, 1041
PsiI TTATAA 1 cut(s) 824
Psp124BI GAGCTC 1 cut(s) 453
Psp6I CCWGG 2 cut(s) 94, 1330
PspFI CCCAGC 1 cut(s) 638
PspGI CCWGG 2 cut(s) 94, 1330
PspN4I GGNNCC 2 cut(s) 187, 1101
PspPI GGNCC 3 cut(s) 98, 185, 1191
PspXI VCTCGAGB 1 cut(s) 574
RsaI GTAC 2 cut(s) 408, 1419
RsaNI GTAC 2 cut(s) 407, 1418
RseI CAYNNNNRTG 1 cut(s) 934
SacI GAGCTC 1 cut(s) 453
SapI GCTCTTC 1 cut(s) 984
SaqAI TTAA 4 cut(s) 53, 618, 675, 1182
SatI GCNGC 2 cut(s) 510, 903
Sau3AI GATC 3 cut(s) 685, 753, 997
Sau96I GGNCC 3 cut(s) 98, 185, 1191
ScaI AGTACT 1 cut(s) 408
SchI GAGTC 2 cut(s) 566, 1041
ScrFI CCNGG 2 cut(s) 96, 1332
SduI GDGCHC 3 cut(s) 447, 453, 1171
SfaNI GCATC 2 cut(s) 292, 403
SfcI CTRYAG 1 cut(s) 325
Sfr274I CTCGAG 1 cut(s) 574
SfuI TTCGAA 1 cut(s) 370
SinI GGWCC 1 cut(s) 98
SlaI CTCGAG 1 cut(s) 574
SmiMI CAYNNNNRTG 1 cut(s) 934
SmlI CTYRAG 3 cut(s) 574, 674, 984
SmoI CTYRAG 3 cut(s) 574, 674, 984
Sse9I AATT 5 cut(s) 529, 649, 715, 880, 1269
SsiI CCGC 2 cut(s) 905, 947
SspI AATATT 1 cut(s) 682
SspMI CTAG 7 cut(s) 15, 206, 459, 597, 995, 1044, 1178
SstI GAGCTC 1 cut(s) 453
StyD4I CCNGG 2 cut(s) 94, 1330
StyI CCWWGG 3 cut(s) 243, 335, 691
TaaI ACNGT 3 cut(s) 24, 765, 1223
TaqI TCGA 5 cut(s) 370, 539, 575, 1026, 1392
TasI AATT 5 cut(s) 529, 649, 715, 880, 1269
TatI WGTACW 1 cut(s) 406
TfiI GAWTC 3 cut(s) 746, 1031, 1323
Tru1I TTAA 4 cut(s) 53, 618, 675, 1182
Tru9I TTAA 4 cut(s) 53, 618, 675, 1182
TscAI CASTG 3 cut(s) 756, 838, 1101
TseFI GTSAC 1 cut(s) 793
TseI GCWGC 2 cut(s) 509, 902
Tsp45I GTSAC 1 cut(s) 793
TspDTI ATGAA 2 cut(s) 225, 1445
TspRI CASTG 3 cut(s) 756, 838, 1101
Van91I CCANNNNNTGG 2 cut(s) 119, 1310
Vha464I CTTAAG 1 cut(s) 674
VneI GTGCAC 2 cut(s) 443, 1167
VpaK11BI GGWCC 1 cut(s) 98
XapI RAATTY 2 cut(s) 649, 880
XhoI CTCGAG 1 cut(s) 574
XmiI GTMKAC 1 cut(s) 19
XspI CTAG 7 cut(s) 15, 206, 459, 597, 995, 1044, 1178
ZrmI AGTACT 1 cut(s) 408
Zsp2I ATGCAT 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.