pycom16g09920

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0000168
Physical Location & Seq
Reverse (-)
6731094 .. 6733573
2480 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g09920.2

Sequence Viewer

Length: 1518 bp
ATGGACTTTTTGAGTTGCATGGTATTGTTCCTCGTAGTCATCTGGATCTCGGTTCATGCCATCTATTACTCGTTTGCAGGAAGAAGATATAGTCCCACTAGGCTTCCACCAGGACCAAACCCACTTCCCTTCATTGGCAATCTTTTGGAGCTTGGTAGCAAACCCCACATCTCTCTCACTAACCTTTCACAACGCCATGGCCCCATTTTGTCTTTACGACTTGGACATGTTACGACGGTTGTAGTTTCTTCATCAATCGTAGCTAAAGAAGTCCTCCGGACCCGTGATCAGTTCTTTTGTAACCGAACCATCCCAGATGCCATCCAGGCCTGTGACCATGTTAAGTACGGCATGCCCTGGATACCGGTTTCAGCGGCATGGAGAAACCTTCGAAAAATATGCAACTCGCATTTGTTTGCCACCAAAGTTCTCGACGCCAACCAAGCCAACCGTCACCTAAAAGTTCAGGAGCTCATATCCGAGGTCAACGAAAGCGTTTTAAAAGGTGAAGCGGTTGATATAGGAAGTGCTGCTTTCAAAACTACGCTCAACTTGATGTCGCGTACCGTATTCTCTGTGGATTTGGCGGACCCGAATAGTGAGACGGCTAGAGAGTATAAGGAGTTGGTGTGGGGTATTATGGAAGAGATTGGGAAGCCAAACTTGGCTGACTATTTTCCTGTACTTAAGAAGATCGATCCCATGGGAATACGGCGTCGTCTGGCCAATCACTTCCAGAAGATGATCGCCCTCTTTGACCGCATGATCACTCAAAGGTTGGAGTCAAGAAAATCACGTGATTATGTCACAACTAAAGATATGTTGGATACACTTATAAACTTCTGTGAAGAGAAAAGCGAGGACTTGAACATGGCTGAAACTGAGCATTTGTTTCTGGATCTGTTTAGTGCAGCCACGGACACAACTTCAGGCACATTGGAATGGGCAATGGCTGAGCTGCTCCGCAACCCGGAAAAACTATCACAAGTACAAGCAGAGCTGAAGCAAATCATCGGCAAAGGAAAGCCAGTTGAGGAGTCACACATTGCTCGACTCCCTTACTTACAAGCCATAATCAAAGAAACCTTCAGATTGCACCCAGTCGTTCCATTTTTACTTCCCCGAAAAGCCGAAGTAGATGTTGAAATCTGCGGGTATATTGTACCAAAAGGTGCACAGGTATTGATCAATGCATGGGCCATAGGGAGAGACCCCAACATTTGGGACGATCCAAACTCGTTTATGCCGGAGAGGTTTTTGGATTCGGAAATTGATGTTTTAGGAGGAAACTTTGAGCTTATTCCGTTTGGTGGTGGGAGGAGAATATGTCCTGGATTGCCATTGGCAATGAGAATGTTGAATTTGATGTTGGGCTCACTTATTAACTCGTTTGACGATTGGAAGCTTGAAGATGGAGTTGTACCAGAGACCTTGAACATGGAAGAGAAGTTTGGCATCACCTTAGCGAAAGCTCAGCCTCTCATAGCTGTGCCCGTGCTACACAAAAACCTAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

506

Amino Acids

56.9

Weight (kDa)

6.48

Isoelectric Point (pI)

38.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 836
AccB7I CCANNNNNTGG 1 cut(s) 1221
AccII CGCG 1 cut(s) 562
AccIII TCCGGA 1 cut(s) 276
AciI CCGC 6 cut(s) 374, 512, 587, 760, 964, 1152
AclWI GGATC 4 cut(s) 53, 692, 906, 1223
AcoI YGGCCR 1 cut(s) 723
AcsI RAATTY 1 cut(s) 1360
AcuI CTGAAG 3 cut(s) 912, 1022, 1072
AcvI CACGTG 1 cut(s) 797
AcyI GRCGYC 2 cut(s) 435, 715
AfaI GTAC 6 cut(s) 347, 565, 684, 990, 1164, 1422
AfiI CCNNNNNNNGG 4 cut(s) 134, 970, 1221, 1310
AflII CTTAAG 1 cut(s) 686
AflIII ACRYGT 1 cut(s) 226
AgeI ACCGGT 1 cut(s) 364
AgsI TTSAA 6 cut(s) 538, 868, 1145, 1360, 1409, 1435
AjnI CCWGG 4 cut(s) 109, 324, 356, 1330
AjuI GAANNNNNNNTTGG 6 cut(s) 647, 679, 1352, 1384, 1434, 1466
AluBI AGCT 9 cut(s) 151, 263, 472, 958, 1000, 1297, 1405, 1472, 1487
AluI AGCT 9 cut(s) 151, 263, 472, 958, 1000, 1297, 1405, 1472, 1487
Alw21I GWGCWC 2 cut(s) 474, 1177
Alw26I GTCTC 3 cut(s) 596, 1203, 1421
Alw44I GTGCAC 1 cut(s) 1173
AlwI GGATC 4 cut(s) 53, 692, 906, 1223
Aor13HI TCCGGA 1 cut(s) 276
AoxI GGCC 4 cut(s) 199, 327, 723, 1197
ApaLI GTGCAC 1 cut(s) 1173
ApeKI GCWGC 3 cut(s) 530, 911, 958
ApoI RAATTY 1 cut(s) 1360
AsiGI ACCGGT 1 cut(s) 364
AspS9I GGNCC 5 cut(s) 113, 200, 279, 589, 1197
AsuC2I CCSGG 1 cut(s) 971
AsuHPI GGTGA 3 cut(s) 446, 518, 1450
AsuII TTCGAA 1 cut(s) 391
AvaII GGWCC 3 cut(s) 113, 279, 589
BaeGI GKGCMC 2 cut(s) 1177, 1494
BalI TGGCCA 1 cut(s) 725
BanII GRGCYC 2 cut(s) 474, 1376
BbrPI CACGTG 1 cut(s) 797
Bbv12I GWGCWC 2 cut(s) 474, 1177
BbvI GCAGC 3 cut(s) 517, 923, 945
BccI CCATC 4 cut(s) 68, 317, 329, 1406
BceAI ACGGC 3 cut(s) 364, 621, 728
BcgI CGANNNNNNTGC 2 cut(s) 381, 415
BciT130I CCWGG 4 cut(s) 111, 326, 358, 1332
BciVI GTATCC 2 cut(s) 354, 820
BclI TGATCA 3 cut(s) 286, 765, 1185
BcnI CCSGG 1 cut(s) 971
BcoDI GTCTC 3 cut(s) 596, 1203, 1421
BfaI CTAG 3 cut(s) 99, 609, 1511
BfrI CTTAAG 1 cut(s) 686
BfuI GTATCC 2 cut(s) 354, 820
BglI GCCNNNNNGGC 1 cut(s) 326
BisI GCNGC 4 cut(s) 375, 531, 912, 959
BlpI GCTNAGC 2 cut(s) 954, 1473
BlsI GCNGC 4 cut(s) 376, 532, 913, 960
Bme1390I CCNGG 5 cut(s) 111, 326, 358, 971, 1332
Bme18I GGWCC 3 cut(s) 113, 279, 589
BmgT120I GGNCC 5 cut(s) 113, 200, 279, 589, 1197
BmiI GGNNCC 3 cut(s) 202, 281, 591
BmrFI CCNGG 5 cut(s) 111, 326, 358, 971, 1332
BmrI ACTGGG 1 cut(s) 1094
BmsI GCATC 2 cut(s) 307, 1464
BmuI ACTGGG 1 cut(s) 1094
Bpu10I CCTNAGC 1 cut(s) 1462
Bpu1102I GCTNAGC 2 cut(s) 954, 1473
Bpu14I TTCGAA 1 cut(s) 391
BpuMI CCSGG 1 cut(s) 971
Bsa29I ATCGAT 1 cut(s) 696
BsaAI YACGTR 1 cut(s) 797
BsaHI GRCGYC 2 cut(s) 435, 715
BsaI GGTCTC 2 cut(s) 1203, 1421
BsaJI CCNNGG 5 cut(s) 196, 356, 480, 702, 915
BsaWI WCCGGW 2 cut(s) 276, 364
BsaXI ACNNNNNCTCC 4 cut(s) 614, 644, 1312, 1342
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 970, 1221, 1310
Bse118I RCCGGY 1 cut(s) 364
Bse1I ACTGG 2 cut(s) 1028, 1100
Bse3DI GCAATG 3 cut(s) 954, 1044, 1353
BseAI TCCGGA 1 cut(s) 276
BseBI CCWGG 4 cut(s) 111, 326, 358, 1332
BseCI ATCGAT 1 cut(s) 696
BseDI CCNNGG 5 cut(s) 196, 356, 480, 702, 915
BseGI GGATG 2 cut(s) 309, 321
BseLI CCNNNNNNNGG 4 cut(s) 134, 970, 1221, 1310
BseMI GCAATG 3 cut(s) 954, 1044, 1353
BseMII CTCAG 3 cut(s) 873, 945, 1487
BseNI ACTGG 2 cut(s) 1028, 1100
BseRI GAGGAG 2 cut(s) 1049, 1333
BseSI GKGCMC 2 cut(s) 1177, 1494
BseXI GCAGC 3 cut(s) 517, 923, 945
BsgI GTGCAG 1 cut(s) 930
Bsh1236I CGCG 1 cut(s) 562
BshFI GGCC 4 cut(s) 201, 329, 725, 1199
BshTI ACCGGT 1 cut(s) 364
BshVI ATCGAT 1 cut(s) 696
BsiHKAI GWGCWC 2 cut(s) 474, 1177
BsiSI CCGG 4 cut(s) 277, 365, 971, 1247
BslFI GGGAC 2 cut(s) 78, 1238
BslI CCNNNNNNNGG 4 cut(s) 134, 970, 1221, 1310
BsmAI GTCTC 3 cut(s) 596, 1203, 1421
BsmBI CGTCTC 1 cut(s) 596
BsmFI GGGAC 2 cut(s) 78, 1238
BsnI GGCC 4 cut(s) 201, 329, 725, 1199
Bso31I GGTCTC 2 cut(s) 1203, 1421
Bsp119I TTCGAA 1 cut(s) 391
Bsp1286I GDGCHC 4 cut(s) 474, 1177, 1376, 1494
Bsp13I TCCGGA 1 cut(s) 276
Bsp143I GATC 9 cut(s) 45, 286, 693, 697, 744, 765, 898, 1185, 1228
Bsp1720I GCTNAGC 2 cut(s) 954, 1473
Bsp19I CCATGG 2 cut(s) 196, 702
BspACI CCGC 6 cut(s) 374, 512, 587, 760, 964, 1152
BspANI GGCC 4 cut(s) 201, 329, 725, 1199
BspCNI CTCAG 3 cut(s) 874, 946, 1486
BspDI ATCGAT 1 cut(s) 696
BspEI TCCGGA 1 cut(s) 276
BspFNI CGCG 1 cut(s) 562
BspLI GGNNCC 3 cut(s) 202, 281, 591
BspPI GGATC 4 cut(s) 53, 692, 906, 1223
BspT104I TTCGAA 1 cut(s) 391
BspTI CTTAAG 1 cut(s) 686
BspTNI GGTCTC 2 cut(s) 1203, 1421
BsrDI GCAATG 3 cut(s) 954, 1044, 1353
BsrFI RCCGGY 1 cut(s) 364
BsrI ACTGG 2 cut(s) 1028, 1100
BssAI RCCGGY 1 cut(s) 364
BssECI CCNNGG 5 cut(s) 196, 356, 480, 702, 915
BssMI GATC 9 cut(s) 45, 286, 693, 697, 744, 765, 898, 1185, 1228
BssNI GRCGYC 2 cut(s) 435, 715
BssT1I CCWWGG 2 cut(s) 196, 702
Bst2UI CCWGG 4 cut(s) 111, 326, 358, 1332
Bst4CI ACNGT 3 cut(s) 238, 452, 568
Bst6I CTCTTC 3 cut(s) 639, 843, 1437
BstACI GRCGYC 2 cut(s) 435, 715
BstAFI CTTAAG 1 cut(s) 686
BstBAI YACGTR 1 cut(s) 797
BstBI TTCGAA 1 cut(s) 391
BstC8I GCNNGC 1 cut(s) 353
BstDEI CTNAG 4 cut(s) 882, 954, 1462, 1473
BstDSI CCRYGG 3 cut(s) 196, 702, 915
BstF5I GGATG 2 cut(s) 309, 321
BstFNI CGCG 1 cut(s) 562
BstKTI GATC 9 cut(s) 48, 289, 696, 700, 747, 768, 901, 1188, 1231
BstMAI GTCTC 3 cut(s) 596, 1203, 1421
BstMBI GATC 9 cut(s) 45, 286, 693, 697, 744, 765, 898, 1185, 1228
BstMWI GCNNNNNNNGC 2 cut(s) 326, 443
BstNI CCWGG 4 cut(s) 111, 326, 358, 1332
BstNSI RCATGY 2 cut(s) 230, 355
BstSCI CCNGG 5 cut(s) 109, 324, 356, 969, 1330
BstSLI GKGCMC 2 cut(s) 1177, 1494
BstUI CGCG 1 cut(s) 562
BstV1I GCAGC 3 cut(s) 517, 923, 945
BstX2I RGATCY 2 cut(s) 45, 898
BstYI RGATCY 2 cut(s) 45, 898
Bsu15I ATCGAT 1 cut(s) 696
BsuI GTATCC 2 cut(s) 354, 820
BsuRI GGCC 4 cut(s) 201, 329, 725, 1199
BsuTUI ATCGAT 1 cut(s) 696
BtgI CCRYGG 3 cut(s) 196, 702, 915
BtsCI GGATG 2 cut(s) 309, 321
Cac8I GCNNGC 1 cut(s) 353
Cfr10I RCCGGY 1 cut(s) 364
Cfr13I GGNCC 5 cut(s) 113, 200, 279, 589, 1197
ClaI ATCGAT 1 cut(s) 696
CseI GACGC 2 cut(s) 443, 704
Csp6I GTAC 6 cut(s) 346, 564, 683, 989, 1163, 1421
CspAI ACCGGT 1 cut(s) 364
CviQI GTAC 6 cut(s) 346, 564, 683, 989, 1163, 1421
DdeI CTNAG 4 cut(s) 882, 954, 1462, 1473
DpnI GATC 9 cut(s) 47, 288, 695, 699, 746, 767, 900, 1187, 1230
DpnII GATC 9 cut(s) 45, 286, 693, 697, 744, 765, 898, 1185, 1228
DraI TTTAAA 1 cut(s) 501
EaeI YGGCCR 1 cut(s) 723
Eam1104I CTCTTC 3 cut(s) 639, 843, 1437
EarI CTCTTC 3 cut(s) 639, 843, 1437
EciI GGCGGA 1 cut(s) 602
Ecl136II GAGCTC 1 cut(s) 472
Eco130I CCWWGG 2 cut(s) 196, 702
Eco147I AGGCCT 1 cut(s) 329
Eco24I GRGCYC 2 cut(s) 474, 1376
Eco31I GGTCTC 2 cut(s) 1203, 1421
Eco47I GGWCC 3 cut(s) 113, 279, 589
Eco53kI GAGCTC 1 cut(s) 472
Eco57I CTGAAG 3 cut(s) 912, 1022, 1072
Eco72I CACGTG 1 cut(s) 797
EcoICRI GAGCTC 1 cut(s) 472
EcoRII CCWGG 4 cut(s) 109, 324, 356, 1330
EcoT14I CCWWGG 2 cut(s) 196, 702
EcoT22I ATGCAT 1 cut(s) 1195
EcoT38I GRGCYC 2 cut(s) 474, 1376
ErhI CCWWGG 2 cut(s) 196, 702
Esp3I CGTCTC 1 cut(s) 596
FalI AAGNNNNNCTT 4 cut(s) 517, 549, 647, 679
FaqI GGGAC 2 cut(s) 78, 1238
FauI CCCGC 1 cut(s) 1145
FbaI TGATCA 3 cut(s) 286, 765, 1185
Fnu4HI GCNGC 4 cut(s) 375, 531, 912, 959
FokI GGATG 2 cut(s) 296, 308
FriOI GRGCYC 2 cut(s) 474, 1376
Fsp4HI GCNGC 4 cut(s) 375, 531, 912, 959
FspBI CTAG 3 cut(s) 99, 609, 1511
GluI GCNGC 4 cut(s) 375, 531, 912, 959
HaeIII GGCC 4 cut(s) 201, 329, 725, 1199
HapII CCGG 4 cut(s) 277, 365, 971, 1247
HgaI GACGC 2 cut(s) 443, 704
Hin1I GRCGYC 2 cut(s) 435, 715
HincII GTYRAC 1 cut(s) 487
HindII GTYRAC 1 cut(s) 487
HindIII AAGCTT 1 cut(s) 1403
HinfI GANTC 4 cut(s) 782, 1037, 1053, 1262
HpaII CCGG 4 cut(s) 277, 365, 971, 1247
HphI GGTGA 3 cut(s) 446, 518, 1450
Hpy166II GTNNAC 2 cut(s) 487, 1175
Hpy188I TCNGA 3 cut(s) 481, 1091, 1267
Hpy188III TCNNGA 7 cut(s) 43, 277, 431, 467, 736, 786, 896
Hpy8I GTNNAC 2 cut(s) 487, 1175
Hpy99I CGWCG 3 cut(s) 238, 437, 720
HpyAV CCTTC 3 cut(s) 139, 398, 1096
HpyCH4III ACNGT 3 cut(s) 238, 452, 568
HpyCH4IV ACGT 1 cut(s) 796
HpyCH4V TGCA 7 cut(s) 18, 77, 402, 911, 1096, 1175, 1193
HpyF10VI GCNNNNNNNGC 2 cut(s) 326, 443
HpyF3I CTNAG 4 cut(s) 882, 954, 1462, 1473
HpySE526I ACGT 1 cut(s) 796
Hsp92I GRCGYC 2 cut(s) 435, 715
Kpn2I TCCGGA 1 cut(s) 276
Ksp22I TGATCA 3 cut(s) 286, 765, 1185
Kzo9I GATC 9 cut(s) 45, 286, 693, 697, 744, 765, 898, 1185, 1228
LmnI GCTCC 3 cut(s) 148, 469, 966
Lsp1109I GCAGC 3 cut(s) 517, 923, 945
LweI GCATC 2 cut(s) 307, 1464
MaeI CTAG 3 cut(s) 99, 609, 1511
MaeII ACGT 1 cut(s) 796
MaeIII GTNAC 6 cut(s) 229, 299, 332, 452, 805, 1038
MalI GATC 9 cut(s) 47, 288, 695, 699, 746, 767, 900, 1187, 1230
MboI GATC 9 cut(s) 45, 286, 693, 697, 744, 765, 898, 1185, 1228
MboII GAAGA 9 cut(s) 93, 96, 240, 656, 703, 751, 860, 1421, 1454
MflI RGATCY 2 cut(s) 45, 898
MhlI GDGCHC 4 cut(s) 474, 1177, 1376, 1494
MlsI TGGCCA 1 cut(s) 725
MluCI AATT 2 cut(s) 1269, 1360
MluNI TGGCCA 1 cut(s) 725
MlyI GAGTC 3 cut(s) 791, 1046, 1047
MmeI TCCRAC 2 cut(s) 759, 804
Mox20I TGGCCA 1 cut(s) 725
Mph1103I ATGCAT 1 cut(s) 1195
MroI TCCGGA 1 cut(s) 276
MscI TGGCCA 1 cut(s) 725
MseI TTAA 4 cut(s) 342, 500, 687, 1383
MslI CAYNNNNRTG 2 cut(s) 940, 1487
Msp20I TGGCCA 1 cut(s) 725
MspA1I CMGCKG 1 cut(s) 374
MspCI CTTAAG 1 cut(s) 686
MspI CCGG 4 cut(s) 277, 365, 971, 1247
MspR9I CCNGG 5 cut(s) 111, 326, 358, 971, 1332
MvaI CCWGG 4 cut(s) 111, 326, 358, 1332
MvnI CGCG 1 cut(s) 562
MwoI GCNNNNNNNGC 2 cut(s) 326, 443
NciI CCSGG 1 cut(s) 971
NcoI CCATGG 2 cut(s) 196, 702
NdeII GATC 9 cut(s) 45, 286, 693, 697, 744, 765, 898, 1185, 1228
NlaIV GGNNCC 3 cut(s) 202, 281, 591
NmuCI GTSAC 4 cut(s) 332, 452, 805, 1038
NsiI ATGCAT 1 cut(s) 1195
NspI RCATGY 2 cut(s) 230, 355
NspV TTCGAA 1 cut(s) 391
PaeI GCATGC 1 cut(s) 355
PceI AGGCCT 1 cut(s) 329
PciI ACATGT 1 cut(s) 226
PfeI GAWTC 1 cut(s) 1262
PflMI CCANNNNNTGG 1 cut(s) 1221
PfoI TCCNGGA 1 cut(s) 1330
PinAI ACCGGT 1 cut(s) 364
PkrI GCNGC 4 cut(s) 376, 532, 913, 960
PleI GAGTC 3 cut(s) 790, 1045, 1047
PmaCI CACGTG 1 cut(s) 797
PmlI CACGTG 1 cut(s) 797
PpsI GAGTC 3 cut(s) 790, 1045, 1047
Ppu21I YACGTR 1 cut(s) 797
PscI ACATGT 1 cut(s) 226
PsiI TTATAA 1 cut(s) 836
Psp124BI GAGCTC 1 cut(s) 474
Psp6I CCWGG 4 cut(s) 109, 324, 356, 1330
PspCI CACGTG 1 cut(s) 797
PspGI CCWGG 4 cut(s) 109, 324, 356, 1330
PspN4I GGNNCC 3 cut(s) 202, 281, 591
PspPI GGNCC 5 cut(s) 113, 200, 279, 589, 1197
PsuI RGATCY 2 cut(s) 45, 898
RsaI GTAC 6 cut(s) 347, 565, 684, 990, 1164, 1422
RsaNI GTAC 6 cut(s) 346, 564, 683, 989, 1163, 1421
RseI CAYNNNNRTG 2 cut(s) 940, 1487
SacI GAGCTC 1 cut(s) 474
SaqAI TTAA 4 cut(s) 342, 500, 687, 1383
SatI GCNGC 4 cut(s) 375, 531, 912, 959
Sau3AI GATC 9 cut(s) 45, 286, 693, 697, 744, 765, 898, 1185, 1228
Sau96I GGNCC 5 cut(s) 113, 200, 279, 589, 1197
SchI GAGTC 3 cut(s) 791, 1046, 1047
ScrFI CCNGG 5 cut(s) 111, 326, 358, 971, 1332
SduI GDGCHC 4 cut(s) 474, 1177, 1376, 1494
SfaNI GCATC 2 cut(s) 307, 1464
SfuI TTCGAA 1 cut(s) 391
SinI GGWCC 3 cut(s) 113, 279, 589
SmiMI CAYNNNNRTG 2 cut(s) 940, 1487
SmlI CTYRAG 1 cut(s) 686
SmoI CTYRAG 1 cut(s) 686
SphI GCATGC 1 cut(s) 355
Sse9I AATT 2 cut(s) 1269, 1360
SseBI AGGCCT 1 cut(s) 329
SsiI CCGC 6 cut(s) 374, 512, 587, 760, 964, 1152
SspMI CTAG 3 cut(s) 99, 609, 1511
SstI GAGCTC 1 cut(s) 474
StuI AGGCCT 1 cut(s) 329
StyD4I CCNGG 5 cut(s) 109, 324, 356, 969, 1330
StyI CCWWGG 2 cut(s) 196, 702
TaaI ACNGT 3 cut(s) 238, 452, 568
TaiI ACGT 1 cut(s) 799
TaqI TCGA 4 cut(s) 391, 432, 696, 1051
TasI AATT 2 cut(s) 1269, 1360
TatI WGTACW 2 cut(s) 682, 988
TauI GCSGC 1 cut(s) 377
TfiI GAWTC 1 cut(s) 1262
Tru1I TTAA 4 cut(s) 342, 500, 687, 1383
Tru9I TTAA 4 cut(s) 342, 500, 687, 1383
TseFI GTSAC 4 cut(s) 332, 452, 805, 1038
TseI GCWGC 3 cut(s) 530, 911, 958
Tsp45I GTSAC 4 cut(s) 332, 452, 805, 1038
TspDTI ATGAA 3 cut(s) 44, 121, 240
TspGWI ACGGA 2 cut(s) 932, 1293
Van91I CCANNNNNTGG 1 cut(s) 1221
Vha464I CTTAAG 1 cut(s) 686
VneI GTGCAC 1 cut(s) 1173
VpaK11BI GGWCC 3 cut(s) 113, 279, 589
XapI RAATTY 1 cut(s) 1360
XceI RCATGY 2 cut(s) 230, 355
XspI CTAG 3 cut(s) 99, 609, 1511
Zsp2I ATGCAT 1 cut(s) 1195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.