Tubulin-folding cofactor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 864 |
| AccB1I | GGYRCC | 1 cut(s) | 586 |
| AccBSI | CCGCTC | 3 cut(s) | 154, 739, 756 |
| AciI | CCGC | 7 cut(s) | 154, 591, 737, 754, 878, 955, 1255 |
| AclWI | GGATC | 1 cut(s) | 397 |
| AcsI | RAATTY | 1 cut(s) | 26 |
| AcuI | CTGAAG | 2 cut(s) | 111, 924 |
| AcyI | GRCGYC | 2 cut(s) | 782, 861 |
| AfaI | GTAC | 6 cut(s) | 14, 262, 543, 548, 854, 967 |
| AfeI | AGCGCT | 1 cut(s) | 649 |
| AflIII | ACRYGT | 2 cut(s) | 55, 1112 |
| AgsI | TTSAA | 8 cut(s) | 301, 308, 567, 770, 800, 1088, 1151, 1243 |
| AjiI | CACGTC | 2 cut(s) | 56, 1115 |
| AjnI | CCWGG | 6 cut(s) | 21, 376, 405, 581, 717, 1227 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 590, 622, 1120, 1152 |
| AluBI | AGCT | 8 cut(s) | 100, 143, 531, 1105, 1143, 1217, 1320, 1328 |
| AluI | AGCT | 8 cut(s) | 100, 143, 531, 1105, 1143, 1217, 1320, 1328 |
| Alw26I | GTCTC | 4 cut(s) | 485, 576, 665, 915 |
| AlwI | GGATC | 1 cut(s) | 397 |
| Aor51HI | AGCGCT | 1 cut(s) | 649 |
| AoxI | GGCC | 4 cut(s) | 310, 638, 981, 1131 |
| ApeKI | GCWGC | 3 cut(s) | 1093, 1232, 1325 |
| ApoI | RAATTY | 1 cut(s) | 26 |
| AspLEI | GCGC | 2 cut(s) | 650, 670 |
| AspS9I | GGNCC | 1 cut(s) | 556 |
| AsuHPI | GGTGA | 4 cut(s) | 287, 412, 1304, 1395 |
| AvaII | GGWCC | 1 cut(s) | 556 |
| BaeGI | GKGCMC | 1 cut(s) | 589 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 927, 960 |
| BanI | GGYRCC | 1 cut(s) | 586 |
| BbvI | GCAGC | 3 cut(s) | 1080, 1219, 1337 |
| BccI | CCATC | 1 cut(s) | 970 |
| BceAI | ACGGC | 1 cut(s) | 297 |
| BciT130I | CCWGG | 6 cut(s) | 23, 378, 407, 583, 719, 1229 |
| BclI | TGATCA | 1 cut(s) | 1308 |
| BcoDI | GTCTC | 4 cut(s) | 485, 576, 665, 915 |
| BfaI | CTAG | 4 cut(s) | 560, 1053, 1317, 1411 |
| BfmI | CTRYAG | 1 cut(s) | 270 |
| BfoI | RGCGCY | 1 cut(s) | 651 |
| BisI | GCNGC | 5 cut(s) | 155, 956, 1094, 1233, 1326 |
| BlsI | GCNGC | 5 cut(s) | 156, 957, 1095, 1234, 1327 |
| Bme1390I | CCNGG | 6 cut(s) | 23, 378, 407, 583, 719, 1229 |
| Bme18I | GGWCC | 1 cut(s) | 556 |
| BmgBI | CACGTC | 2 cut(s) | 56, 1115 |
| BmgT120I | GGNCC | 1 cut(s) | 556 |
| BmiI | GGNNCC | 3 cut(s) | 588, 1026, 1278 |
| BmrFI | CCNGG | 6 cut(s) | 23, 378, 407, 583, 719, 1229 |
| BmsI | GCATC | 2 cut(s) | 828, 889 |
| BpmI | CTGGAG | 3 cut(s) | 399, 428, 740 |
| Bpu10I | CCTNAGC | 1 cut(s) | 527 |
| BpuEI | CTTGAG | 2 cut(s) | 29, 467 |
| BsaHI | GRCGYC | 2 cut(s) | 782, 861 |
| BsaJI | CCNNGG | 4 cut(s) | 376, 396, 582, 1227 |
| Bse1I | ACTGG | 1 cut(s) | 262 |
| Bse3DI | GCAATG | 5 cut(s) | 279, 526, 663, 1056, 1337 |
| BseBI | CCWGG | 6 cut(s) | 23, 378, 407, 583, 719, 1229 |
| BseDI | CCNNGG | 4 cut(s) | 376, 396, 582, 1227 |
| BseMI | GCAATG | 5 cut(s) | 279, 526, 663, 1056, 1337 |
| BseMII | CTCAG | 2 cut(s) | 428, 1382 |
| BseNI | ACTGG | 1 cut(s) | 262 |
| BseSI | GKGCMC | 1 cut(s) | 589 |
| BseXI | GCAGC | 3 cut(s) | 1080, 1219, 1337 |
| BshFI | GGCC | 4 cut(s) | 312, 640, 983, 1133 |
| BshNI | GGYRCC | 1 cut(s) | 586 |
| BsmAI | GTCTC | 4 cut(s) | 485, 576, 665, 915 |
| BsnI | GGCC | 4 cut(s) | 312, 640, 983, 1133 |
| Bsp1286I | GDGCHC | 1 cut(s) | 589 |
| Bsp143I | GATC | 4 cut(s) | 103, 318, 402, 1308 |
| BspACI | CCGC | 7 cut(s) | 154, 591, 737, 754, 878, 955, 1255 |
| BspANI | GGCC | 4 cut(s) | 312, 640, 983, 1133 |
| BspCNI | CTCAG | 2 cut(s) | 429, 1381 |
| BspHI | TCATGA | 1 cut(s) | 1191 |
| BspLI | GGNNCC | 3 cut(s) | 588, 1026, 1278 |
| BspPI | GGATC | 1 cut(s) | 397 |
| BspT107I | GGYRCC | 1 cut(s) | 586 |
| BsrBI | CCGCTC | 3 cut(s) | 154, 739, 756 |
| BsrDI | GCAATG | 5 cut(s) | 279, 526, 663, 1056, 1337 |
| BsrI | ACTGG | 1 cut(s) | 262 |
| BssECI | CCNNGG | 4 cut(s) | 376, 396, 582, 1227 |
| BssMI | GATC | 4 cut(s) | 103, 318, 402, 1308 |
| BssNI | GRCGYC | 2 cut(s) | 782, 861 |
| BssT1I | CCWWGG | 1 cut(s) | 396 |
| Bst2UI | CCWGG | 6 cut(s) | 23, 378, 407, 583, 719, 1229 |
| Bst4CI | ACNGT | 5 cut(s) | 123, 291, 546, 766, 844 |
| Bst6I | CTCTTC | 1 cut(s) | 332 |
| BstACI | GRCGYC | 2 cut(s) | 782, 861 |
| BstDEI | CTNAG | 5 cut(s) | 437, 527, 759, 1329, 1368 |
| BstH2I | RGCGCY | 1 cut(s) | 651 |
| BstHHI | GCGC | 2 cut(s) | 650, 670 |
| BstKTI | GATC | 4 cut(s) | 106, 321, 405, 1311 |
| BstMAI | GTCTC | 4 cut(s) | 485, 576, 665, 915 |
| BstMBI | GATC | 4 cut(s) | 103, 318, 402, 1308 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 516, 1102, 1223, 1232 |
| BstNI | CCWGG | 6 cut(s) | 23, 378, 407, 583, 719, 1229 |
| BstNSI | RCATGY | 1 cut(s) | 1126 |
| BstSCI | CCNGG | 6 cut(s) | 21, 376, 405, 581, 717, 1227 |
| BstSFI | CTRYAG | 1 cut(s) | 270 |
| BstSLI | GKGCMC | 1 cut(s) | 589 |
| BstV1I | GCAGC | 3 cut(s) | 1080, 1219, 1337 |
| BsuRI | GGCC | 4 cut(s) | 312, 640, 983, 1133 |
| BtrI | CACGTC | 2 cut(s) | 56, 1115 |
| BtsI | GCAGTG | 1 cut(s) | 600 |
| BtsIMutI | CAGTG | 1 cut(s) | 600 |
| CciI | TCATGA | 1 cut(s) | 1191 |
| CfoI | GCGC | 2 cut(s) | 650, 670 |
| Cfr13I | GGNCC | 1 cut(s) | 556 |
| CseI | GACGC | 1 cut(s) | 771 |
| Csp6I | GTAC | 6 cut(s) | 13, 261, 542, 547, 853, 966 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1231, 1266 |
| CviAII | CATG | 4 cut(s) | 742, 1123, 1160, 1192 |
| CviQI | GTAC | 6 cut(s) | 13, 261, 542, 547, 853, 966 |
| DdeI | CTNAG | 5 cut(s) | 437, 527, 759, 1329, 1368 |
| DpnI | GATC | 4 cut(s) | 105, 320, 404, 1310 |
| DpnII | GATC | 4 cut(s) | 103, 318, 402, 1308 |
| DraI | TTTAAA | 1 cut(s) | 210 |
| Eam1104I | CTCTTC | 1 cut(s) | 332 |
| EarI | CTCTTC | 1 cut(s) | 332 |
| EciI | GGCGGA | 1 cut(s) | 1270 |
| Eco130I | CCWWGG | 1 cut(s) | 396 |
| Eco147I | AGGCCT | 1 cut(s) | 1133 |
| Eco47I | GGWCC | 1 cut(s) | 556 |
| Eco47III | AGCGCT | 1 cut(s) | 649 |
| Eco57I | CTGAAG | 2 cut(s) | 111, 924 |
| EcoO109I | RGGNCCY | 1 cut(s) | 556 |
| EcoRII | CCWGG | 6 cut(s) | 21, 376, 405, 581, 717, 1227 |
| EcoT14I | CCWWGG | 1 cut(s) | 396 |
| EcoT22I | ATGCAT | 1 cut(s) | 821 |
| ErhI | CCWWGG | 1 cut(s) | 396 |
| FaeI | CATG | 4 cut(s) | 745, 1126, 1163, 1195 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 84, 116, 590, 622 |
| FatI | CATG | 4 cut(s) | 741, 1122, 1159, 1191 |
| FauI | CCCGC | 2 cut(s) | 598, 885 |
| FbaI | TGATCA | 1 cut(s) | 1308 |
| Fnu4HI | GCNGC | 5 cut(s) | 155, 956, 1094, 1233, 1326 |
| Fsp4HI | GCNGC | 5 cut(s) | 155, 956, 1094, 1233, 1326 |
| FspBI | CTAG | 4 cut(s) | 560, 1053, 1317, 1411 |
| GlaI | GCGC | 2 cut(s) | 649, 669 |
| GluI | GCNGC | 5 cut(s) | 155, 956, 1094, 1233, 1326 |
| GsuI | CTGGAG | 3 cut(s) | 399, 428, 740 |
| HaeII | RGCGCY | 1 cut(s) | 651 |
| HaeIII | GGCC | 4 cut(s) | 312, 640, 983, 1133 |
| HgaI | GACGC | 1 cut(s) | 771 |
| HhaI | GCGC | 2 cut(s) | 650, 670 |
| Hin1I | GRCGYC | 2 cut(s) | 782, 861 |
| Hin1II | CATG | 4 cut(s) | 745, 1126, 1163, 1195 |
| Hin6I | GCGC | 2 cut(s) | 648, 668 |
| HinP1I | GCGC | 2 cut(s) | 648, 668 |
| HindIII | AAGCTT | 2 cut(s) | 98, 1103 |
| HinfI | GANTC | 8 cut(s) | 113, 167, 350, 372, 563, 793, 1195, 1333 |
| HphI | GGTGA | 4 cut(s) | 287, 412, 1304, 1395 |
| Hpy166II | GTNNAC | 3 cut(s) | 15, 117, 1403 |
| Hpy188I | TCNGA | 6 cut(s) | 108, 187, 355, 892, 1356, 1371 |
| Hpy188III | TCNNGA | 3 cut(s) | 689, 1118, 1192 |
| Hpy8I | GTNNAC | 3 cut(s) | 15, 117, 1403 |
| Hpy99I | CGWCG | 2 cut(s) | 71, 866 |
| HpyAV | CCTTC | 2 cut(s) | 50, 302 |
| HpyCH4III | ACNGT | 5 cut(s) | 123, 291, 546, 766, 844 |
| HpyCH4IV | ACGT | 3 cut(s) | 55, 861, 1114 |
| HpyCH4V | TGCA | 5 cut(s) | 510, 819, 1061, 1068, 1325 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 516, 1102, 1223, 1232 |
| HpyF3I | CTNAG | 5 cut(s) | 437, 527, 759, 1329, 1368 |
| HpySE526I | ACGT | 3 cut(s) | 55, 861, 1114 |
| Hsp92I | GRCGYC | 2 cut(s) | 782, 861 |
| Hsp92II | CATG | 4 cut(s) | 745, 1126, 1163, 1195 |
| HspAI | GCGC | 2 cut(s) | 648, 668 |
| Ksp22I | TGATCA | 1 cut(s) | 1308 |
| Kzo9I | GATC | 4 cut(s) | 103, 318, 402, 1308 |
| LmnI | GCTCC | 2 cut(s) | 409, 1214 |
| Lsp1109I | GCAGC | 3 cut(s) | 1080, 1219, 1337 |
| LweI | GCATC | 2 cut(s) | 828, 889 |
| MaeI | CTAG | 4 cut(s) | 560, 1053, 1317, 1411 |
| MaeII | ACGT | 3 cut(s) | 55, 861, 1114 |
| MaeIII | GTNAC | 5 cut(s) | 191, 275, 493, 838, 1292 |
| MalI | GATC | 4 cut(s) | 105, 320, 404, 1310 |
| MbiI | CCGCTC | 3 cut(s) | 154, 739, 756 |
| MboI | GATC | 4 cut(s) | 103, 318, 402, 1308 |
| MboII | GAAGA | 6 cut(s) | 346, 349, 610, 788, 865, 1164 |
| MfeI | CAATTG | 1 cut(s) | 701 |
| MhlI | GDGCHC | 1 cut(s) | 589 |
| MluCI | AATT | 9 cut(s) | 26, 84, 252, 601, 701, 770, 804, 1062, 1361 |
| MlyI | GAGTC | 3 cut(s) | 122, 161, 1342 |
| MmeI | TCCRAC | 1 cut(s) | 657 |
| MnlI | CCTC | 6 cut(s) | 432, 547, 973, 1365, 1400, 1404 |
| Mph1103I | ATGCAT | 1 cut(s) | 821 |
| MseI | TTAA | 7 cut(s) | 74, 209, 327, 363, 807, 1032, 1364 |
| MspR9I | CCNGG | 6 cut(s) | 23, 378, 407, 583, 719, 1229 |
| MunI | CAATTG | 1 cut(s) | 701 |
| MvaI | CCWGG | 6 cut(s) | 23, 378, 407, 583, 719, 1229 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 516, 1102, 1223, 1232 |
| NdeII | GATC | 4 cut(s) | 103, 318, 402, 1308 |
| NlaIII | CATG | 4 cut(s) | 745, 1126, 1163, 1195 |
| NlaIV | GGNNCC | 3 cut(s) | 588, 1026, 1278 |
| NmuCI | GTSAC | 4 cut(s) | 191, 275, 838, 1292 |
| NsiI | ATGCAT | 1 cut(s) | 821 |
| NspI | RCATGY | 1 cut(s) | 1126 |
| PagI | TCATGA | 1 cut(s) | 1191 |
| PceI | AGGCCT | 1 cut(s) | 1133 |
| PfeI | GAWTC | 5 cut(s) | 350, 372, 563, 793, 1195 |
| PflFI | GACNNNGTC | 1 cut(s) | 863 |
| PfoI | TCCNGGA | 1 cut(s) | 405 |
| PkrI | GCNGC | 5 cut(s) | 156, 957, 1095, 1234, 1327 |
| PleI | GAGTC | 3 cut(s) | 121, 161, 1341 |
| PpsI | GAGTC | 3 cut(s) | 121, 161, 1341 |
| PpuMI | RGGWCCY | 1 cut(s) | 556 |
| Psp5II | RGGWCCY | 1 cut(s) | 556 |
| Psp6I | CCWGG | 6 cut(s) | 21, 376, 405, 581, 717, 1227 |
| PspGI | CCWGG | 6 cut(s) | 21, 376, 405, 581, 717, 1227 |
| PspN4I | GGNNCC | 3 cut(s) | 588, 1026, 1278 |
| PspPI | GGNCC | 1 cut(s) | 556 |
| PspPPI | RGGWCCY | 1 cut(s) | 556 |
| PsyI | GACNNNGTC | 1 cut(s) | 863 |
| RsaI | GTAC | 6 cut(s) | 14, 262, 543, 548, 854, 967 |
| RsaNI | GTAC | 6 cut(s) | 13, 261, 542, 547, 853, 966 |
| SaqAI | TTAA | 7 cut(s) | 74, 209, 327, 363, 807, 1032, 1364 |
| SatI | GCNGC | 5 cut(s) | 155, 956, 1094, 1233, 1326 |
| Sau3AI | GATC | 4 cut(s) | 103, 318, 402, 1308 |
| Sau96I | GGNCC | 1 cut(s) | 556 |
| SchI | GAGTC | 3 cut(s) | 122, 161, 1342 |
| ScrFI | CCNGG | 6 cut(s) | 23, 378, 407, 583, 719, 1229 |
| SduI | GDGCHC | 1 cut(s) | 589 |
| SfaNI | GCATC | 2 cut(s) | 828, 889 |
| SfcI | CTRYAG | 1 cut(s) | 270 |
| SinI | GGWCC | 1 cut(s) | 556 |
| SmlI | CTYRAG | 2 cut(s) | 44, 446 |
| SmoI | CTYRAG | 2 cut(s) | 44, 446 |
| Sse9I | AATT | 9 cut(s) | 26, 84, 252, 601, 701, 770, 804, 1062, 1361 |
| SseBI | AGGCCT | 1 cut(s) | 1133 |
| SsiI | CCGC | 7 cut(s) | 154, 591, 737, 754, 878, 955, 1255 |
| SspI | AATATT | 1 cut(s) | 304 |
| SspMI | CTAG | 4 cut(s) | 560, 1053, 1317, 1411 |
| StuI | AGGCCT | 1 cut(s) | 1133 |
| StyD4I | CCNGG | 6 cut(s) | 21, 376, 405, 581, 717, 1227 |
| StyI | CCWWGG | 1 cut(s) | 396 |
| TaaI | ACNGT | 5 cut(s) | 123, 291, 546, 766, 844 |
| TaiI | ACGT | 3 cut(s) | 58, 864, 1117 |
| TaqI | TCGA | 1 cut(s) | 708 |
| TaqII | GACCGA | 1 cut(s) | 80 |
| TasI | AATT | 9 cut(s) | 26, 84, 252, 601, 701, 770, 804, 1062, 1361 |
| TatI | WGTACW | 2 cut(s) | 12, 965 |
| TauI | GCSGC | 2 cut(s) | 157, 958 |
| TfiI | GAWTC | 5 cut(s) | 350, 372, 563, 793, 1195 |
| Tru1I | TTAA | 7 cut(s) | 74, 209, 327, 363, 807, 1032, 1364 |
| Tru9I | TTAA | 7 cut(s) | 74, 209, 327, 363, 807, 1032, 1364 |
| TscAI | CASTG | 1 cut(s) | 600 |
| TseFI | GTSAC | 4 cut(s) | 191, 275, 838, 1292 |
| TseI | GCWGC | 3 cut(s) | 1093, 1232, 1325 |
| Tsp45I | GTSAC | 4 cut(s) | 191, 275, 838, 1292 |
| TspDTI | ATGAA | 6 cut(s) | 349, 468, 644, 1176, 1208, 1373 |
| TspGWI | ACGGA | 1 cut(s) | 1017 |
| TspRI | CASTG | 1 cut(s) | 600 |
| Tth111I | GACNNNGTC | 1 cut(s) | 863 |
| VpaK11BI | GGWCC | 1 cut(s) | 556 |
| XapI | RAATTY | 1 cut(s) | 26 |
| XceI | RCATGY | 1 cut(s) | 1126 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 403 |
| XspI | CTAG | 4 cut(s) | 560, 1053, 1317, 1411 |
| ZraI | GACGTC | 1 cut(s) | 862 |
| Zsp2I | ATGCAT | 1 cut(s) | 821 |