Rw4G017220

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000441
Physical Location & Seq
Reverse (-)
38792911 .. 38796002
3092 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G017220.1

Sequence Viewer

Length: 2016 bp
ATGACGGATGAGCTTAGAGCAGACATAACACAAGAGAAACTAGTTTTGATCCAGAGAACACCATTTGGGAGCTTGTTTATGGCGTATTACAATGGTACATTAATAGAATCTGCTTGCAAAAAATCTGATTTGGAAATAGTGGCTCTCTTGAAGTGTTTTAACCAGCAAAACAAAAGTTTTAATTTTGGGGAGTTCACCGGTACTATAACCAGCAAAGACATCTCTGAGTTGTTTGGCTTAACACTCATTGGGGAAGAAATTAACCTAGATCAGAAGAAGAAGAAAGAGGATGACGGATTCAGGACAAGACAACTGGGCGGAGTCCCGAGGATGAGCAAGGCAATATTAGAACAAAAAATAAAACATGTGGCTAAGTTGAGAGGGATTGAGGATGAAAAAGATTTTGTAAGGCTTGTCTGTCTCTACTTTTGCGTTACATTATTCCTCTGCAATAGTGGTAATGAACTCGGTTGGAATGTCCTCCCATATATAGAGGATATTGAAACAATGTCGCAGTATGCATGGGCACCTTTAGTGTGTGATCATTTAATGGAATCGATTATGAAGATGAATGGTCGTCCTGAAACTGCATGTGGGTGTGTAATTGCTCTGCCGTTTTGGTTTTGTGAGCGGACTCTATTCATTGAACCGATGAGAGGAAGGGAAGTAATGGAACCAAAAATTGTGAAATGGAATTTGCCGGAACTTTATGCTAGGATGAAAGTGGCCTCTATTCTTGAGATAGAGGTGAAGGAGAGAGATGGGGATCAGAGTACAAATGTTATGCCTAGTGGTGAGAAGCAGTTATTTGAAATTGGGACTACAAGCGGTACAAAATCAAGAGAACAAAAAAATGCCATTGATTTTGATCCCAACAAGATGTTCCAGCTGTTACCGACCCAATTCTACTTGGAAGAAAGCCAAGAGGGACCTTCAAGCAATGAGGAAGATGTACCTGAATTGGAGAAAAAGGTTCAAGAGTTTGCTGATTTGCTTGAGGTTGAGCGAGCCAAAAATGAGACTCTTAGTGCGGAAAATTTGAAACTATGCATGGAGATAGGATTGCTCAGGCAAGCCATTCCTAAAGACGAGATTCCAAATGTGAATTCAAGGAAGTTGAGGACAAAAGAACAATGCAAAAAACCATCATTCCTTGAAGGTTATATCATTGGCGACATTAGAGCCAAAAGAGGTAAGGAAAAGATCATTGATGAAATAGGTGATGCTGTTGTGGAAGAACCAGCTGTGAAGAAGGGGAAGAAACAGACTGTTGCGCAACAAATAATTGTGAGAAGGTTAAGGGTTGGAAAGTTGATGTCCCAGGTGCTGGATGCGTATTTTGAAATTTTAAGCCTCGATCAACAGGCAATGACGGAAGGTGGCATTACTTCATATATTATGCCAACTTTTTCATGGGATATGGTGAAAGGGGGGGACAAAAGAGCTATTGTTGCAGCTTATCTGGAGCATATCTTGAAAAATATTCGGGACAAGGACTTTATATGTATCCCAATTGTTCATGAGAAAGAAAATCACTTCACCCTGTTGGTATTGAACAGAAAACTTGGTTTGTGGGAACATTACAACTCATTACGCCCAAAGCGAGCAACAACCCTAGATCAGTGCTTTGTGGAGGCAGTAAAATTGCATGCGGAAATGACAAAGCATTTTACATTTCTGAAAACTCATCGTAAAGGTATAATTAATAGTGGGCAGATATGGAAACATGTAATGAGGGGAGGAGAAGTGAATTTATTCCAATACAAGCTCTCAAACGAAGACCGGGACTTGCTTATCTGGTTGGGAGGTAACTCTGTTGAACATTTTCCTATCAGACCTAACAAGGAATGTCCACAACAAGATTCTGGAAGTGTGGATTGTGCGATTGGAGTGATGTACATAGTCAAGAAATTATCAAAGGGAAAAGTGGTAGACTCTACCTTTACCAAAGGTCTAATGCCGAATATGAGGGCACATATTTTAGAAAGATTTTTAAATATGCCGAATGGAGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

671

Amino Acids

76.7

Weight (kDa)

7.15

Isoelectric Point (pI)

44.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 46 - 233 2.6e-11 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000441)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25221 FvH4_2g35252 FvH4_5g07921 FvH4_5g28462
malus_domestica MD05G1260800.v1.1 MD07G1009100.v1.1 MD15G1218700.v1.1
pyrus_communis pycom06g12090 pycom06g12100 pycom13g29410 pycom14g00750 pycom14g00760 pycom17g09320
rosa_chinensis RchiOBHm_Chr1g0331351 RchiOBHm_Chr5g0012151 RchiOBHm_Chr5g0033751 RchiOBHm_Chr5g0050991 RchiOBHm_Chr6g0253451
rosa_laevigata RLG00000003481 RLG00000004801 RLG00000006482 RLG00000007938 RLG00000008591 RLG00000015997 RLG00000016551 RLG00000019935 RLG00000023215 RLG00000023450 RLG00000026296 RLG00000029174 RLG00000030924 RLG00000032897 RLG00000036108
rosa_multiflora Rmu_sc0000611.1_g000017 Rmu_sc0001084.1_g000012 Rmu_sc0001296.1_g000006 Rmu_sc0001306.1_g000031 Rmu_sc0001473.1_g000034 Rmu_sc0002806.1_g000024 Rmu_sc0004605.1_g000010 Rmu_sc0013864.1_g000011
rosa_roxburghii Rroxscaffold_7G00210800
rosa_rugosa Rorug05G0253300
rosa_samantha Rh1AG193700 Rh1BG004100 Rh1BG004200 Rh1DG121500 Rh2AG369300 Rh4BG319300 Rh4BG319400 Rh4CG334700 Rh4CG334800 Rh4DG097100 Rh4DG097200 Rh5AG009200 Rh5AG183100 Rh5BG347200 Rh5CG010100 Rh5CG074900 Rh5CG075000 Rh5CG103300 Rh5CG263100 Rh5CG263300 Rh5DG061600 Rh5DG061700 Rh5DG250100 Rh5DG250200 Rh5DG360300 Rh5DG481800 Rh6BG120200 Rh6CG118200 Rh6CG118300 Rh6CG118400 Rh6CG257400 Rh6DG106600 Rh6DG106700 Rh6DG106800 Rh7AG076400 Rh7AG368300 Rh7AG501100 Rh7BG428100 Rh7BG443600 Rh7BG472400 Rh7CG386600 Rh7CG386700 Rh7DG258200
rosa_wichuraiana Rw0G020150 Rw2G018580 Rw3G027670 Rw4G017220 Rw5G012220 Rw5G016600 Rw7G006450 Rw7G017450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1275
AccB1I GGYRCC 1 cut(s) 526
AccB7I CCANNNNNTGG 1 cut(s) 1327
AccBSI CCGCTC 1 cut(s) 631
AccI GTMKAC 1 cut(s) 1932
AciI CCGC 5 cut(s) 318, 631, 828, 1031, 1652
AclWI GGATC 3 cut(s) 43, 774, 863
AcsI RAATTY 5 cut(s) 694, 1036, 1105, 1344, 1750
AfaI GTAC 6 cut(s) 97, 202, 775, 832, 954, 1898
AfiI CCNNNNNNNGG 2 cut(s) 656, 1327
AflIII ACRYGT 2 cut(s) 364, 1726
AgeI ACCGGT 1 cut(s) 197
AhlI ACTAGT 1 cut(s) 40
AjnI CCWGG 1 cut(s) 1320
AjuI GAANNNNNNNTTGG 4 cut(s) 866, 898, 1090, 1122
AluBI AGCT 7 cut(s) 13, 72, 889, 1244, 1445, 1457, 1768
AluI AGCT 7 cut(s) 13, 72, 889, 1244, 1445, 1457, 1768
Alw26I GTCTC 2 cut(s) 425, 1013
AlwI GGATC 3 cut(s) 43, 774, 863
AlwNI CAGNNNCTG 1 cut(s) 1327
Ama87I CYCGRG 1 cut(s) 325
AoxI GGCC 1 cut(s) 726
ApeKI GCWGC 1 cut(s) 1454
ApoI RAATTY 5 cut(s) 694, 1036, 1105, 1344, 1750
AseI ATTAAT 2 cut(s) 101, 1704
AsiGI ACCGGT 1 cut(s) 197
Asp700I GAANNNNTTC 2 cut(s) 1754, 1824
AspLEI GCGC 1 cut(s) 1276
AspS9I GGNCC 1 cut(s) 929
AsuC2I CCSGG 1 cut(s) 1784
AsuHPI GGTGA 6 cut(s) 187, 760, 806, 1232, 1435, 1531
AvaI CYCGRG 1 cut(s) 325
AvaII GGWCC 1 cut(s) 929
BaeGI GKGCMC 2 cut(s) 529, 1975
BanI GGYRCC 1 cut(s) 526
BbsI GAAGAC 1 cut(s) 1785
BbvI GCAGC 1 cut(s) 1466
BccI CCATC 2 cut(s) 755, 1153
BceAI ACGGC 1 cut(s) 598
BciT130I CCWGG 1 cut(s) 1322
BciVI GTATCC 1 cut(s) 1517
BclI TGATCA 1 cut(s) 541
BcnI CCSGG 1 cut(s) 1784
BcoDI GTCTC 2 cut(s) 425, 1013
BcuI ACTAGT 1 cut(s) 40
BfaI CTAG 6 cut(s) 41, 266, 714, 789, 1616, 2014
BfuI GTATCC 1 cut(s) 1517
BisI GCNGC 1 cut(s) 1455
BlsI GCNGC 1 cut(s) 1456
Bme1390I CCNGG 2 cut(s) 1322, 1784
Bme18I GGWCC 1 cut(s) 929
BmeT110I CYCGRG 1 cut(s) 325
BmgT120I GGNCC 1 cut(s) 929
BmiI GGNNCC 4 cut(s) 528, 675, 930, 2011
BmrFI CCNGG 2 cut(s) 1322, 1784
BmrI ACTGGG 1 cut(s) 323
BmsI GCATC 2 cut(s) 1213, 1321
BmuI ACTGGG 1 cut(s) 323
BpiI GAAGAC 1 cut(s) 1785
BpmI CTGGAG 1 cut(s) 1484
Bpu10I CCTNAGC 1 cut(s) 1067
BpuEI CTTGAG 2 cut(s) 758, 1016
BpuMI CCSGG 1 cut(s) 1784
Bsa29I ATCGAT 1 cut(s) 557
BsaBI GATNNNNATC 2 cut(s) 765, 867
BsaJI CCNNGG 2 cut(s) 326, 1320
BsaWI WCCGGW 1 cut(s) 197
BsaXI ACNNNNNCTCC 2 cut(s) 1731, 1761
Bsc4I CCNNNNNNNGG 2 cut(s) 656, 1327
Bse118I RCCGGY 1 cut(s) 197
Bse1I ACTGG 1 cut(s) 318
Bse3DI GCAATG 2 cut(s) 946, 1374
Bse8I GATNNNNATC 2 cut(s) 765, 867
BseBI CCWGG 1 cut(s) 1322
BseCI ATCGAT 1 cut(s) 557
BseDI CCNNGG 2 cut(s) 326, 1320
BseGI GGATG 6 cut(s) 13, 295, 336, 397, 723, 1336
BseJI GATNNNNATC 2 cut(s) 765, 867
BseLI CCNNNNNNNGG 2 cut(s) 656, 1327
BseMI GCAATG 2 cut(s) 946, 1374
BseMII CTCAG 2 cut(s) 216, 1081
BseNI ACTGG 1 cut(s) 318
BseRI GAGGAG 1 cut(s) 1755
BseSI GKGCMC 2 cut(s) 529, 1975
BseXI GCAGC 1 cut(s) 1466
BshFI GGCC 1 cut(s) 728
BshNI GGYRCC 1 cut(s) 526
BshTI ACCGGT 1 cut(s) 197
BshVI ATCGAT 1 cut(s) 557
BsiHKCI CYCGRG 1 cut(s) 325
BsiSI CCGG 3 cut(s) 198, 701, 1783
BslFI GGGAC 7 cut(s) 308, 832, 942, 1303, 1448, 1502, 1799
BslI CCNNNNNNNGG 2 cut(s) 656, 1327
BsmAI GTCTC 2 cut(s) 425, 1013
BsmFI GGGAC 7 cut(s) 308, 832, 942, 1303, 1448, 1502, 1799
BsnI GGCC 1 cut(s) 728
BsoBI CYCGRG 1 cut(s) 325
Bsp1286I GDGCHC 2 cut(s) 529, 1975
Bsp1407I TGTACA 1 cut(s) 1896
Bsp143I GATC 8 cut(s) 48, 268, 541, 766, 868, 1203, 1357, 1618
BspACI CCGC 5 cut(s) 318, 631, 828, 1031, 1652
BspANI GGCC 1 cut(s) 728
BspCNI CTCAG 2 cut(s) 217, 1080
BspDI ATCGAT 1 cut(s) 557
BspHI TCATGA 1 cut(s) 1519
BspLI GGNNCC 4 cut(s) 528, 675, 930, 2011
BspPI GGATC 3 cut(s) 43, 774, 863
BspT107I GGYRCC 1 cut(s) 526
BsrBI CCGCTC 1 cut(s) 631
BsrDI GCAATG 2 cut(s) 946, 1374
BsrFI RCCGGY 1 cut(s) 197
BsrGI TGTACA 1 cut(s) 1896
BsrI ACTGG 1 cut(s) 318
BssAI RCCGGY 1 cut(s) 197
BssECI CCNNGG 2 cut(s) 326, 1320
BssMI GATC 8 cut(s) 48, 268, 541, 766, 868, 1203, 1357, 1618
Bst2UI CCWGG 1 cut(s) 1322
Bst4CI ACNGT 1 cut(s) 1270
BstAUI TGTACA 1 cut(s) 1896
BstC8I GCNNGC 5 cut(s) 115, 1008, 1074, 1605, 1650
BstDEI CTNAG 5 cut(s) 14, 225, 372, 1025, 1067
BstF5I GGATG 6 cut(s) 13, 295, 336, 397, 723, 1336
BstHHI GCGC 1 cut(s) 1276
BstKTI GATC 8 cut(s) 51, 271, 544, 769, 871, 1206, 1360, 1621
BstMAI GTCTC 2 cut(s) 425, 1013
BstMBI GATC 8 cut(s) 48, 268, 541, 766, 868, 1203, 1357, 1618
BstMWI GCNNNNNNNGC 1 cut(s) 1451
BstNI CCWGG 1 cut(s) 1322
BstNSI RCATGY 4 cut(s) 368, 594, 1652, 1730
BstSCI CCNGG 2 cut(s) 1320, 1782
BstSLI GKGCMC 2 cut(s) 529, 1975
BstV1I GCAGC 1 cut(s) 1466
BstV2I GAAGAC 1 cut(s) 1785
Bsu15I ATCGAT 1 cut(s) 557
BsuI GTATCC 1 cut(s) 1517
BsuRI GGCC 1 cut(s) 728
BsuTUI ATCGAT 1 cut(s) 557
BtsCI GGATG 6 cut(s) 13, 295, 336, 397, 723, 1336
BtsIMutI CAGTG 1 cut(s) 1628
Cac8I GCNNGC 5 cut(s) 115, 1008, 1074, 1605, 1650
CaiI CAGNNNCTG 1 cut(s) 1327
CciI TCATGA 1 cut(s) 1519
CfoI GCGC 1 cut(s) 1276
Cfr10I RCCGGY 1 cut(s) 197
Cfr13I GGNCC 1 cut(s) 929
ClaI ATCGAT 1 cut(s) 557
Csp6I GTAC 6 cut(s) 96, 201, 774, 831, 953, 1897
CspAI ACCGGT 1 cut(s) 197
CviAII CATG 8 cut(s) 365, 522, 591, 1051, 1413, 1520, 1649, 1727
CviQI GTAC 6 cut(s) 96, 201, 774, 831, 953, 1897
DdeI CTNAG 5 cut(s) 14, 225, 372, 1025, 1067
DpnI GATC 8 cut(s) 50, 270, 543, 768, 870, 1205, 1359, 1620
DpnII GATC 8 cut(s) 48, 268, 541, 766, 868, 1203, 1357, 1618
DraI TTTAAA 1 cut(s) 1995
EciI GGCGGA 1 cut(s) 333
Eco47I GGWCC 1 cut(s) 929
Eco88I CYCGRG 1 cut(s) 325
EcoO109I RGGNCCY 1 cut(s) 929
EcoRI GAATTC 1 cut(s) 1105
EcoRII CCWGG 1 cut(s) 1320
EcoT22I ATGCAT 2 cut(s) 523, 1052
FaeI CATG 8 cut(s) 368, 525, 594, 1054, 1416, 1523, 1652, 1730
FaqI GGGAC 7 cut(s) 308, 832, 942, 1303, 1448, 1502, 1799
FatI CATG 8 cut(s) 364, 521, 590, 1050, 1412, 1519, 1648, 1726
FbaI TGATCA 1 cut(s) 541
FblI GTMKAC 1 cut(s) 1932
Fnu4HI GCNGC 1 cut(s) 1455
FokI GGATG 6 cut(s) 20, 302, 343, 404, 730, 1343
Fsp4HI GCNGC 1 cut(s) 1455
FspBI CTAG 6 cut(s) 41, 266, 714, 789, 1616, 2014
FspI TGCGCA 1 cut(s) 1275
GlaI GCGC 1 cut(s) 1275
GluI GCNGC 1 cut(s) 1455
GsuI CTGGAG 1 cut(s) 1484
HaeIII GGCC 1 cut(s) 728
HapII CCGG 3 cut(s) 198, 701, 1783
HhaI GCGC 1 cut(s) 1276
Hin1II CATG 8 cut(s) 368, 525, 594, 1054, 1416, 1523, 1652, 1730
Hin6I GCGC 1 cut(s) 1274
HinP1I GCGC 1 cut(s) 1274
HinfI GANTC 9 cut(s) 107, 297, 321, 554, 634, 1021, 1093, 1862, 1934
HpaII CCGG 3 cut(s) 198, 701, 1783
HphI GGTGA 6 cut(s) 187, 760, 806, 1232, 1435, 1531
Hpy166II GTNNAC 3 cut(s) 195, 1853, 1933
Hpy188I TCNGA 6 cut(s) 127, 226, 273, 771, 1680, 1835
Hpy8I GTNNAC 3 cut(s) 195, 1853, 1933
HpyAV CCTTC 7 cut(s) 654, 745, 942, 1151, 1246, 1287, 1370
HpyCH4III ACNGT 1 cut(s) 1270
HpyCH4V TGCA 8 cut(s) 117, 450, 521, 590, 1050, 1137, 1454, 1648
HpyF10VI GCNNNNNNNGC 1 cut(s) 1451
HpyF3I CTNAG 5 cut(s) 14, 225, 372, 1025, 1067
Hsp92II CATG 8 cut(s) 368, 525, 594, 1054, 1416, 1523, 1652, 1730
HspAI GCGC 1 cut(s) 1274
Ksp22I TGATCA 1 cut(s) 541
Kzo9I GATC 8 cut(s) 48, 268, 541, 766, 868, 1203, 1357, 1618
LmnI GCTCC 3 cut(s) 69, 1465, 2009
Lsp1109I GCAGC 1 cut(s) 1466
LweI GCATC 2 cut(s) 1213, 1321
MaeI CTAG 6 cut(s) 41, 266, 714, 789, 1616, 2014
MaeIII GTNAC 3 cut(s) 433, 891, 1808
MalI GATC 8 cut(s) 50, 270, 543, 768, 870, 1205, 1359, 1620
MbiI CCGCTC 1 cut(s) 631
MboI GATC 8 cut(s) 48, 268, 541, 766, 868, 1203, 1357, 1618
MfeI CAATTG 1 cut(s) 1512
MhlI GDGCHC 2 cut(s) 529, 1975
MlyI GAGTC 4 cut(s) 330, 628, 1015, 1928
MmeI TCCRAC 2 cut(s) 452, 1285
Mph1103I ATGCAT 2 cut(s) 523, 1052
MroXI GAANNNNTTC 2 cut(s) 1754, 1824
MslI CAYNNNNRTG 1 cut(s) 595
MspA1I CMGCKG 2 cut(s) 889, 1244
MspI CCGG 3 cut(s) 198, 701, 1783
MspR9I CCNGG 2 cut(s) 1322, 1784
MunI CAATTG 1 cut(s) 1512
MvaI CCWGG 1 cut(s) 1322
MwoI GCNNNNNNNGC 1 cut(s) 1451
NciI CCSGG 1 cut(s) 1784
NdeII GATC 8 cut(s) 48, 268, 541, 766, 868, 1203, 1357, 1618
NlaIII CATG 8 cut(s) 368, 525, 594, 1054, 1416, 1523, 1652, 1730
NlaIV GGNNCC 4 cut(s) 528, 675, 930, 2011
NsbI TGCGCA 1 cut(s) 1275
NsiI ATGCAT 2 cut(s) 523, 1052
NspI RCATGY 4 cut(s) 368, 594, 1652, 1730
PaeI GCATGC 1 cut(s) 1652
PagI TCATGA 1 cut(s) 1519
PciI ACATGT 2 cut(s) 364, 1726
PcsI WCGNNNNNNNCGW 1 cut(s) 1600
PdmI GAANNNNTTC 2 cut(s) 1754, 1824
PfeI GAWTC 5 cut(s) 107, 297, 554, 1093, 1862
PflMI CCANNNNNTGG 1 cut(s) 1327
PinAI ACCGGT 1 cut(s) 197
PkrI GCNGC 1 cut(s) 1456
PleI GAGTC 4 cut(s) 329, 628, 1015, 1928
PpsI GAGTC 4 cut(s) 329, 628, 1015, 1928
PpuMI RGGWCCY 1 cut(s) 929
PscI ACATGT 2 cut(s) 364, 1726
PshBI ATTAAT 2 cut(s) 101, 1704
Psp5II RGGWCCY 1 cut(s) 929
Psp6I CCWGG 1 cut(s) 1320
PspGI CCWGG 1 cut(s) 1320
PspN4I GGNNCC 4 cut(s) 528, 675, 930, 2011
PspPI GGNCC 1 cut(s) 929
PspPPI RGGWCCY 1 cut(s) 929
PstNI CAGNNNCTG 1 cut(s) 1327
PvuII CAGCTG 2 cut(s) 889, 1244
RsaI GTAC 6 cut(s) 97, 202, 775, 832, 954, 1898
RsaNI GTAC 6 cut(s) 96, 201, 774, 831, 953, 1897
RseI CAYNNNNRTG 1 cut(s) 595
SatI GCNGC 1 cut(s) 1455
Sau3AI GATC 8 cut(s) 48, 268, 541, 766, 868, 1203, 1357, 1618
Sau96I GGNCC 1 cut(s) 929
SchI GAGTC 4 cut(s) 330, 628, 1015, 1928
ScrFI CCNGG 2 cut(s) 1322, 1784
SduI GDGCHC 2 cut(s) 529, 1975
SfaNI GCATC 2 cut(s) 1213, 1321
SinI GGWCC 1 cut(s) 929
SmiMI CAYNNNNRTG 1 cut(s) 595
SmlI CTYRAG 2 cut(s) 737, 995
SmoI CTYRAG 2 cut(s) 737, 995
SpeI ACTAGT 1 cut(s) 40
SphI GCATGC 1 cut(s) 1652
SsiI CCGC 5 cut(s) 318, 631, 828, 1031, 1652
SspI AATATT 2 cut(s) 345, 1483
SspMI CTAG 6 cut(s) 41, 266, 714, 789, 1616, 2014
StyD4I CCNGG 2 cut(s) 1320, 1782
TaaI ACNGT 1 cut(s) 1270
TaqI TCGA 2 cut(s) 557, 1356
TatI WGTACW 2 cut(s) 773, 1896
TfiI GAWTC 5 cut(s) 107, 297, 554, 1093, 1862
TscAI CASTG 1 cut(s) 1628
TseI GCWGC 1 cut(s) 1454
TspGWI ACGGA 3 cut(s) 20, 309, 1388
TspRI CASTG 1 cut(s) 1628
Van91I CCANNNNNTGG 1 cut(s) 1327
VpaK11BI GGWCC 1 cut(s) 929
VspI ATTAAT 2 cut(s) 101, 1704
XapI RAATTY 5 cut(s) 694, 1036, 1105, 1344, 1750
XceI RCATGY 4 cut(s) 368, 594, 1652, 1730
XcmI CCANNNNNNNNNTGG 1 cut(s) 1410
XmiI GTMKAC 1 cut(s) 1932
XmnI GAANNNNTTC 2 cut(s) 1754, 1824
XspI CTAG 6 cut(s) 41, 266, 714, 789, 1616, 2014
Zsp2I ATGCAT 2 cut(s) 523, 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.