Rorug06G0269100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000500
Physical Location & Seq
Forward (+)
41614723 .. 41617489
2767 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0269100.1

Sequence Viewer

Length: 1140 bp
ATGGAACATTGTCTCTCCCACCACAAGCTCCTCGCTCTTCCGTCCCCGCTCTCCACCTTGAAGCCGCGATTAGCGCTCAATTTCGCGCCCAAATCCCAGGCGTTGACCAGGCGGTTGACTGTGGTAGCCGGCGCCGGGGCGTCGAGCCACTGCGAGTTCAGCAGCCTCAACTCGCCGCTCGACCCGAGGACCCGATCCGGCAAGGACCTCAGCTCCGTTTTGCAGAACCACCCGCAGCTGTTTCACTTGGCCGTCGCTCAGGAGCTCAAGCAGTTGGCCGATCAGCGACAGGACGCGCGGTGTCGTATGTATCTCAGCGCTTCGTCTCATGAGGCCTGCCTTCATAGGAGGATTGCTCAACTGAAGGAGCAGCAGTGCCAGATTGCTGTTGAAGATGTCATGTACCTGTTGATCTTTTACAAGTTTTCTGAGGTCAAAGTTCCTTTGGTTCCTAAACTTTCTAGATGCATCTACAATGATAGACTGGAGATATTGCCTGCAAAAGATTGGGAGCTAGAGTCCATTTACAGCTTGGAGGTTTTGGAGATGATAAGGGAACATGTCACCACTGTCATTGGCTTGAGAGCAAATTCTAGTGTCACAGACAATTGGGCCATGACAAAGATAACCCGCCAGACGCTTGGCCGAGTATATGTGGCCTCCATCTTATATGGCTACTTTTTGAAATCTGTCTCATTGAGGCATCGCCTGGAACGAAGTCTATTTCTTGAAACCCAAGACCTTCATCTGAGTTGTAGAACCTCCCTTCAGGAAATGTCTCCTCATGGAATAAAAAGTCTTCTCTTTGGCCACGTCGGCAAATTTCAATCGGAGTGTGTAGGGTCAAGTAGGCAGGAAAAGACACATGGAAAGTTGAAATGTTATGTGATGGGGTTTGATCCCGAGACACTACAGAGATGTGCAAAATTGAGATCTGAGGAGGCTGTGAATTTAATTAAAAATCACTGTTGTGCACTTTTTGGGGATGATGCGGAAATGGGTTCTCTTGAGTCGGATGAAGTTATCTCTACTTCATTTTCAAGCCTGAAGAGGCTAGTTTTGGAGGCTGTTGCTTTCGGTTCTTTCCTTTGGGACACAGAAGAATGCATTGATAGTGTTTATAAGCTTAAGGAGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

379

Amino Acids

42.89

Weight (kDa)

8.17

Isoelectric Point (pI)

48.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF760 PF05542 114 - 241 8.9e-19 Protein of unknown function (DUF760)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000500)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21520
fragaria_vesca FvH4_2g24233 FvH4_2g28070 FvH4_2g28080 FvH4_2g28100 FvH4_2g28120 FvH4_2g28140 FvH4_2g28150 FvH4_2g28160 FvH4_2g28170 FvH4_2g28200 FvH4_2g28210 FvH4_2g28211 FvH4_2g28220 FvH4_2g28230
prunus_persica Prupe.1G487200_v2.0.a1 Prupe.3G116400_v2.0.a1 Prupe.8G205900_v2.0.a1 Prupe.8G206000_v2.0.a1 Prupe.8G206100_v2.0.a1 Prupe.8G206300_v2.0.a1
pyrus_communis pycom05g16480 pycom05g16510 pycom05g16520 pycom05g16540 pycom10g14500 pycom10g14510 pycom10g14540 pycom12g16800
rosa_chinensis RchiOBHm_Chr6g0297031 RchiOBHm_Chr6g0297041
rosa_laevigata RLG00000011633 RLG00000011635 RLG00000011636 RLG00000011637 RLG00000011638 RLG00000011643 RLG00000011644
rosa_roxburghii Rroxscaffold_2G00150260 Rroxscaffold_4G00302450 Rroxscaffold_7G00170860 Rroxscaffold_7G00170880 Rroxscaffold_7G00170890 Rroxscaffold_7G00170910 Rroxscaffold_7G00170920 Rroxscaffold_7G00170950 Rroxscaffold_7G00171000
rosa_rugosa Rorug01G0231200 Rorug06G0267900 Rorug06G0268000 Rorug06G0268100 Rorug06G0268200 Rorug06G0268600 Rorug06G0268700 Rorug06G0268700 Rorug06G0268700 Rorug06G0269100
rosa_samantha Rh6AG378600 Rh6AG378700 Rh6AG379000 Rh6AG379200 Rh6AG379300 Rh6AG379600 Rh6AG379900 Rh6AG380100 Rh6AG380300 Rh6BG386600 Rh6BG386700 Rh6BG386800 Rh6BG387300 Rh6BG387600 Rh6BG388100 Rh6BG388300 Rh6CG392500 Rh6CG392600 Rh6CG392700 Rh6CG393000 Rh6CG393100 Rh6CG393200 Rh6CG393300 Rh6CG393500 Rh6CG393700 Rh6DG379200 Rh6DG379400 Rh6DG379600 Rh6DG380100 Rh6DG380200 Rh6DG380300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1122
AccB1I GGYRCC 1 cut(s) 131
AccBSI CCGCTC 2 cut(s) 49, 178
AccII CGCG 4 cut(s) 67, 86, 296, 298
AciI CCGC 8 cut(s) 47, 65, 112, 176, 233, 298, 631, 992
AclWI GGATC 2 cut(s) 189, 893
AcoI YGGCCR 4 cut(s) 249, 276, 643, 808
AcsI RAATTY 3 cut(s) 589, 821, 949
AcuI CTGAAG 3 cut(s) 383, 752, 1067
AcyI GRCGYC 2 cut(s) 132, 140
AfaI GTAC 1 cut(s) 404
AfeI AGCGCT 2 cut(s) 75, 319
AfiI CCNNNNNNNGG 1 cut(s) 135
AflII CTTAAG 1 cut(s) 1127
AflIII ACRYGT 1 cut(s) 559
AgsI TTSAA 7 cut(s) 61, 392, 685, 731, 827, 877, 1041
AjiI CACGTC 1 cut(s) 814
AjnI CCWGG 3 cut(s) 96, 107, 708
AleI CACNNNNGTG 1 cut(s) 969
AluBI AGCT 7 cut(s) 28, 213, 238, 265, 514, 531, 1126
AluI AGCT 7 cut(s) 28, 213, 238, 265, 514, 531, 1126
Alw21I GWGCWC 2 cut(s) 267, 976
Alw26I GTCTC 5 cut(s) 17, 330, 697, 783, 899
Alw44I GTGCAC 1 cut(s) 972
AlwI GGATC 2 cut(s) 189, 893
Ama87I CYCGRG 2 cut(s) 184, 902
Aor51HI AGCGCT 2 cut(s) 75, 319
AoxI GGCC 7 cut(s) 249, 276, 333, 612, 643, 657, 808
ApaLI GTGCAC 1 cut(s) 972
ApeKI GCWGC 3 cut(s) 162, 235, 370
ApoI RAATTY 3 cut(s) 589, 821, 949
AspLEI GCGC 5 cut(s) 76, 88, 134, 298, 320
AspS9I GGNCC 3 cut(s) 189, 205, 612
AsuC2I CCSGG 1 cut(s) 136
AsuHPI GGTGA 1 cut(s) 556
AvaI CYCGRG 2 cut(s) 184, 902
AvaII GGWCC 2 cut(s) 189, 205
BaeGI GKGCMC 1 cut(s) 976
BalI TGGCCA 1 cut(s) 810
BanI GGYRCC 1 cut(s) 131
BanII GRGCYC 1 cut(s) 267
BbsI GAAGAC 1 cut(s) 791
Bbv12I GWGCWC 2 cut(s) 267, 976
BbvCI CCTCAGC 1 cut(s) 209
BbvI GCAGC 3 cut(s) 174, 247, 382
BccI CCATC 2 cut(s) 671, 883
BceAI ACGGC 1 cut(s) 236
BciT130I CCWGG 3 cut(s) 98, 109, 710
BcnI CCSGG 1 cut(s) 136
BcoDI GTCTC 5 cut(s) 17, 330, 697, 783, 899
BfaI CTAG 4 cut(s) 462, 515, 594, 1055
BfmI CTRYAG 1 cut(s) 911
BfoI RGCGCY 3 cut(s) 77, 135, 321
BfrI CTTAAG 1 cut(s) 1127
BglI GCCNNNNNGGC 1 cut(s) 816
BglII AGATCT 1 cut(s) 932
BisI GCNGC 5 cut(s) 65, 163, 176, 236, 371
BlsI GCNGC 5 cut(s) 66, 164, 177, 237, 372
Bme1390I CCNGG 4 cut(s) 98, 109, 136, 710
Bme18I GGWCC 2 cut(s) 189, 205
BmeT110I CYCGRG 2 cut(s) 184, 902
BmgBI CACGTC 1 cut(s) 814
BmgT120I GGNCC 3 cut(s) 189, 205, 612
BmiI GGNNCC 3 cut(s) 133, 191, 450
BmrFI CCNGG 4 cut(s) 98, 109, 136, 710
BmsI GCATC 4 cut(s) 455, 477, 712, 979
BpiI GAAGAC 1 cut(s) 791
BplI GAGNNNNNCTC 2 cut(s) 340, 372
BpmI CTGGAG 1 cut(s) 506
Bpu10I CCTNAGC 2 cut(s) 209, 258
BpuEI CTTGAG 3 cut(s) 251, 601, 1028
BpuMI CCSGG 1 cut(s) 136
BsaHI GRCGYC 2 cut(s) 132, 140
BsaJI CCNNGG 3 cut(s) 96, 135, 185
BsaXI ACNNNNNCTCC 6 cut(s) 197, 227, 359, 389, 503, 533
Bsc4I CCNNNNNNNGG 1 cut(s) 135
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 1 cut(s) 489
BseBI CCWGG 3 cut(s) 98, 109, 710
BseDI CCNNGG 3 cut(s) 96, 135, 185
BseGI GGATG 2 cut(s) 991, 1021
BseLI CCNNNNNNNGG 1 cut(s) 135
BseMII CTCAG 6 cut(s) 223, 272, 328, 420, 740, 927
BseNI ACTGG 1 cut(s) 489
BseRI GAGGAG 3 cut(s) 20, 771, 953
BseSI GKGCMC 1 cut(s) 976
BseXI GCAGC 3 cut(s) 174, 247, 382
Bsh1236I CGCG 4 cut(s) 67, 86, 296, 298
BshFI GGCC 7 cut(s) 251, 278, 335, 614, 645, 659, 810
BshNI GGYRCC 1 cut(s) 131
BsiHKAI GWGCWC 2 cut(s) 267, 976
BsiHKCI CYCGRG 2 cut(s) 184, 902
BsiSI CCGG 3 cut(s) 129, 135, 198
BslFI GGGAC 2 cut(s) 28, 1106
BslI CCNNNNNNNGG 1 cut(s) 135
BsmAI GTCTC 5 cut(s) 17, 330, 697, 783, 899
BsmBI CGTCTC 1 cut(s) 330
BsmFI GGGAC 2 cut(s) 28, 1106
BsmI GAATGC 1 cut(s) 1109
BsnI GGCC 7 cut(s) 251, 278, 335, 614, 645, 659, 810
BsoBI CYCGRG 2 cut(s) 184, 902
Bsp1286I GDGCHC 2 cut(s) 267, 976
Bsp143I GATC 5 cut(s) 194, 280, 411, 898, 932
BspACI CCGC 8 cut(s) 47, 65, 112, 176, 233, 298, 631, 992
BspANI GGCC 7 cut(s) 251, 278, 335, 614, 645, 659, 810
BspCNI CTCAG 6 cut(s) 222, 271, 327, 421, 741, 928
BspFNI CGCG 4 cut(s) 67, 86, 296, 298
BspHI TCATGA 1 cut(s) 328
BspLI GGNNCC 3 cut(s) 133, 191, 450
BspPI GGATC 2 cut(s) 189, 893
BspQI GCTCTTC 1 cut(s) 42
BspT107I GGYRCC 1 cut(s) 131
BspTI CTTAAG 1 cut(s) 1127
BsrBI CCGCTC 2 cut(s) 49, 178
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 1 cut(s) 489
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 3 cut(s) 96, 135, 185
BssMI GATC 5 cut(s) 194, 280, 411, 898, 932
BssNI GRCGYC 2 cut(s) 132, 140
Bst2UI CCWGG 3 cut(s) 98, 109, 710
Bst4CI ACNGT 3 cut(s) 121, 571, 968
Bst6I CTCTTC 2 cut(s) 42, 1043
BstACI GRCGYC 2 cut(s) 132, 140
BstAFI CTTAAG 1 cut(s) 1127
BstC8I GCNNGC 3 cut(s) 130, 337, 498
BstDEI CTNAG 6 cut(s) 209, 258, 314, 429, 749, 936
BstF5I GGATG 2 cut(s) 991, 1021
BstFNI CGCG 4 cut(s) 67, 86, 296, 298
BstH2I RGCGCY 3 cut(s) 77, 135, 321
BstHHI GCGC 5 cut(s) 76, 88, 134, 298, 320
BstKTI GATC 5 cut(s) 197, 283, 414, 901, 935
BstMAI GTCTC 5 cut(s) 17, 330, 697, 783, 899
BstMBI GATC 5 cut(s) 194, 280, 411, 898, 932
BstMWI GCNNNNNNNGC 3 cut(s) 73, 159, 816
BstNI CCWGG 3 cut(s) 98, 109, 710
BstNSI RCATGY 1 cut(s) 563
BstSCI CCNGG 4 cut(s) 96, 107, 134, 708
BstSFI CTRYAG 1 cut(s) 911
BstSLI GKGCMC 1 cut(s) 976
BstUI CGCG 4 cut(s) 67, 86, 296, 298
BstV1I GCAGC 3 cut(s) 174, 247, 382
BstV2I GAAGAC 1 cut(s) 791
BstX2I RGATCY 1 cut(s) 932
BstXI CCANNNNNNTGG 1 cut(s) 641
BstYI RGATCY 1 cut(s) 932
BsuRI GGCC 7 cut(s) 251, 278, 335, 614, 645, 659, 810
BtgZI GCGATG 1 cut(s) 689
BtrI CACGTC 1 cut(s) 814
BtsCI GGATG 2 cut(s) 991, 1021
BtsI GCAGTG 2 cut(s) 148, 380
BtsIMutI CAGTG 4 cut(s) 148, 380, 567, 964
Cac8I GCNNGC 3 cut(s) 130, 337, 498
CciI TCATGA 1 cut(s) 328
CfoI GCGC 5 cut(s) 76, 88, 134, 298, 320
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 3 cut(s) 189, 205, 612
CseI GACGC 3 cut(s) 129, 302, 646
Csp6I GTAC 1 cut(s) 403
CspCI CAANNNNNGTGG 2 cut(s) 556, 591
CviAII CATG 6 cut(s) 329, 400, 560, 616, 785, 866
CviQI GTAC 1 cut(s) 403
DdeI CTNAG 6 cut(s) 209, 258, 314, 429, 749, 936
DinI GGCGCC 1 cut(s) 133
DpnI GATC 5 cut(s) 196, 282, 413, 900, 934
DpnII GATC 5 cut(s) 194, 280, 411, 898, 932
EaeI YGGCCR 4 cut(s) 249, 276, 643, 808
Eam1104I CTCTTC 2 cut(s) 42, 1043
EarI CTCTTC 2 cut(s) 42, 1043
Ecl136II GAGCTC 1 cut(s) 265
Eco147I AGGCCT 1 cut(s) 335
Eco24I GRGCYC 1 cut(s) 267
Eco47I GGWCC 2 cut(s) 189, 205
Eco47III AGCGCT 2 cut(s) 75, 319
Eco53kI GAGCTC 1 cut(s) 265
Eco57I CTGAAG 3 cut(s) 383, 752, 1067
Eco88I CYCGRG 2 cut(s) 184, 902
EcoICRI GAGCTC 1 cut(s) 265
EcoO109I RGGNCCY 2 cut(s) 189, 205
EcoRII CCWGG 3 cut(s) 96, 107, 708
EcoT22I ATGCAT 2 cut(s) 470, 1109
EcoT38I GRGCYC 1 cut(s) 267
EgeI GGCGCC 1 cut(s) 133
EheI GGCGCC 1 cut(s) 133
Esp3I CGTCTC 1 cut(s) 330
FaeI CATG 6 cut(s) 332, 403, 563, 619, 788, 869
FaqI GGGAC 2 cut(s) 28, 1106
FatI CATG 6 cut(s) 328, 399, 559, 615, 784, 865
FauI CCCGC 3 cut(s) 54, 240, 638
Fnu4HI GCNGC 5 cut(s) 65, 163, 176, 236, 371
FokI GGATG 2 cut(s) 998, 1028
FriOI GRGCYC 1 cut(s) 267
Fsp4HI GCNGC 5 cut(s) 65, 163, 176, 236, 371
FspBI CTAG 4 cut(s) 462, 515, 594, 1055
GlaI GCGC 5 cut(s) 75, 87, 133, 297, 319
GluI GCNGC 5 cut(s) 65, 163, 176, 236, 371
GsuI CTGGAG 1 cut(s) 506
HaeII RGCGCY 3 cut(s) 77, 135, 321
HaeIII GGCC 7 cut(s) 251, 278, 335, 614, 645, 659, 810
HapII CCGG 3 cut(s) 129, 135, 198
HgaI GACGC 3 cut(s) 129, 302, 646
HhaI GCGC 5 cut(s) 76, 88, 134, 298, 320
Hin1I GRCGYC 2 cut(s) 132, 140
Hin1II CATG 6 cut(s) 332, 403, 563, 619, 788, 869
Hin6I GCGC 5 cut(s) 74, 86, 132, 296, 318
HinP1I GCGC 5 cut(s) 74, 86, 132, 296, 318
HincII GTYRAC 2 cut(s) 105, 117
HindII GTYRAC 2 cut(s) 105, 117
HindIII AAGCTT 1 cut(s) 1124
HinfI GANTC 2 cut(s) 518, 1010
HpaII CCGG 3 cut(s) 129, 135, 198
HphI GGTGA 1 cut(s) 556
Hpy166II GTNNAC 3 cut(s) 105, 117, 974
Hpy188I TCNGA 5 cut(s) 430, 750, 832, 937, 1015
Hpy188III TCNNGA 7 cut(s) 260, 329, 462, 728, 770, 902, 1007
Hpy8I GTNNAC 3 cut(s) 105, 117, 974
Hpy99I CGWCG 3 cut(s) 145, 257, 818
HpyAV CCTTC 4 cut(s) 350, 358, 752, 776
HpyCH4III ACNGT 3 cut(s) 121, 571, 968
HpyCH4IV ACGT 1 cut(s) 813
HpyCH4V TGCA 6 cut(s) 223, 468, 500, 923, 974, 1107
HpyF10VI GCNNNNNNNGC 3 cut(s) 73, 159, 816
HpyF3I CTNAG 6 cut(s) 209, 258, 314, 429, 749, 936
HpySE526I ACGT 1 cut(s) 813
Hsp92I GRCGYC 2 cut(s) 132, 140
Hsp92II CATG 6 cut(s) 332, 403, 563, 619, 788, 869
HspAI GCGC 5 cut(s) 74, 86, 132, 296, 318
KasI GGCGCC 1 cut(s) 131
KroI GCCGGC 1 cut(s) 128
KroNI GCCGGC 1 cut(s) 130
Kzo9I GATC 5 cut(s) 194, 280, 411, 898, 932
LguI GCTCTTC 1 cut(s) 42
LmnI GCTCC 5 cut(s) 33, 218, 262, 367, 511
Lsp1109I GCAGC 3 cut(s) 174, 247, 382
LweI GCATC 4 cut(s) 455, 477, 712, 979
MaeI CTAG 4 cut(s) 462, 515, 594, 1055
MaeII ACGT 1 cut(s) 813
MaeIII GTNAC 2 cut(s) 562, 598
MalI GATC 5 cut(s) 196, 282, 413, 900, 934
MbiI CCGCTC 2 cut(s) 49, 178
MboI GATC 5 cut(s) 194, 280, 411, 898, 932
MboII GAAGA 5 cut(s) 29, 404, 791, 1060, 1112
MfeI CAATTG 1 cut(s) 607
MflI RGATCY 1 cut(s) 932
MhlI GDGCHC 2 cut(s) 267, 976
MlsI TGGCCA 1 cut(s) 810
MluCI AATT 7 cut(s) 79, 589, 607, 821, 926, 949, 954
MluNI TGGCCA 1 cut(s) 810
Mly113I GGCGCC 1 cut(s) 132
MlyI GAGTC 2 cut(s) 527, 1019
MmeI TCCRAC 1 cut(s) 993
Mox20I TGGCCA 1 cut(s) 810
Mph1103I ATGCAT 2 cut(s) 470, 1109
MroNI GCCGGC 1 cut(s) 128
MscI TGGCCA 1 cut(s) 810
MseI TTAA 3 cut(s) 953, 957, 1128
MslI CAYNNNNRTG 1 cut(s) 969
Msp20I TGGCCA 1 cut(s) 810
MspA1I CMGCKG 1 cut(s) 238
MspCI CTTAAG 1 cut(s) 1127
MspI CCGG 3 cut(s) 129, 135, 198
MspR9I CCNGG 4 cut(s) 98, 109, 136, 710
MunI CAATTG 1 cut(s) 607
Mva1269I GAATGC 1 cut(s) 1109
MvaI CCWGG 3 cut(s) 98, 109, 710
MvnI CGCG 4 cut(s) 67, 86, 296, 298
MwoI GCNNNNNNNGC 3 cut(s) 73, 159, 816
NaeI GCCGGC 1 cut(s) 130
NarI GGCGCC 1 cut(s) 132
NciI CCSGG 1 cut(s) 136
NdeII GATC 5 cut(s) 194, 280, 411, 898, 932
NgoMIV GCCGGC 1 cut(s) 128
NlaIII CATG 6 cut(s) 332, 403, 563, 619, 788, 869
NlaIV GGNNCC 3 cut(s) 133, 191, 450
NmeAIII GCCGAG 1 cut(s) 671
NmuCI GTSAC 2 cut(s) 562, 598
NsiI ATGCAT 2 cut(s) 470, 1109
NspI RCATGY 1 cut(s) 563
OliI CACNNNNGTG 1 cut(s) 969
PacI TTAATTAA 1 cut(s) 957
PagI TCATGA 1 cut(s) 328
PceI AGGCCT 1 cut(s) 335
PciI ACATGT 1 cut(s) 559
PciSI GCTCTTC 1 cut(s) 42
PcsI WCGNNNNNNNCGW 1 cut(s) 712
PctI GAATGC 1 cut(s) 1109
PdiI GCCGGC 1 cut(s) 130
PkrI GCNGC 5 cut(s) 66, 164, 177, 237, 372
PleI GAGTC 2 cut(s) 526, 1018
PluTI GGCGCC 1 cut(s) 135
PpsI GAGTC 2 cut(s) 526, 1018
PpuMI RGGWCCY 2 cut(s) 189, 205
PscI ACATGT 1 cut(s) 559
PsiI TTATAA 1 cut(s) 1122
Psp124BI GAGCTC 1 cut(s) 267
Psp5II RGGWCCY 2 cut(s) 189, 205
Psp6I CCWGG 3 cut(s) 96, 107, 708
PspGI CCWGG 3 cut(s) 96, 107, 708
PspN4I GGNNCC 3 cut(s) 133, 191, 450
PspPI GGNCC 3 cut(s) 189, 205, 612
PspPPI RGGWCCY 2 cut(s) 189, 205
PsuI RGATCY 1 cut(s) 932
PvuII CAGCTG 1 cut(s) 238
RsaI GTAC 1 cut(s) 404
RsaNI GTAC 1 cut(s) 403
RseI CAYNNNNRTG 1 cut(s) 969
SacI GAGCTC 1 cut(s) 267
SapI GCTCTTC 1 cut(s) 42
SaqAI TTAA 3 cut(s) 953, 957, 1128
SatI GCNGC 5 cut(s) 65, 163, 176, 236, 371
Sau3AI GATC 5 cut(s) 194, 280, 411, 898, 932
Sau96I GGNCC 3 cut(s) 189, 205, 612
SchI GAGTC 2 cut(s) 527, 1019
ScrFI CCNGG 4 cut(s) 98, 109, 136, 710
SduI GDGCHC 2 cut(s) 267, 976
SfaNI GCATC 4 cut(s) 455, 477, 712, 979
SfcI CTRYAG 1 cut(s) 911
SfoI GGCGCC 1 cut(s) 133
SinI GGWCC 2 cut(s) 189, 205
SmiMI CAYNNNNRTG 1 cut(s) 969
SmlI CTYRAG 4 cut(s) 266, 580, 1007, 1127
SmoI CTYRAG 4 cut(s) 266, 580, 1007, 1127
Sse9I AATT 7 cut(s) 79, 589, 607, 821, 926, 949, 954
SseBI AGGCCT 1 cut(s) 335
SsiI CCGC 8 cut(s) 47, 65, 112, 176, 233, 298, 631, 992
SspDI GGCGCC 1 cut(s) 131
SspMI CTAG 4 cut(s) 462, 515, 594, 1055
SstI GAGCTC 1 cut(s) 267
StuI AGGCCT 1 cut(s) 335
StyD4I CCNGG 4 cut(s) 96, 107, 134, 708
TaaI ACNGT 3 cut(s) 121, 571, 968
TaiI ACGT 1 cut(s) 816
TaqI TCGA 2 cut(s) 143, 180
TasI AATT 7 cut(s) 79, 589, 607, 821, 926, 949, 954
TauI GCSGC 2 cut(s) 67, 178
Tru1I TTAA 3 cut(s) 953, 957, 1128
Tru9I TTAA 3 cut(s) 953, 957, 1128
TscAI CASTG 4 cut(s) 155, 380, 574, 971
TseFI GTSAC 2 cut(s) 562, 598
TseI GCWGC 3 cut(s) 162, 235, 370
Tsp45I GTSAC 2 cut(s) 562, 598
TspDTI ATGAA 4 cut(s) 332, 734, 1023, 1032
TspGWI ACGGA 2 cut(s) 30, 205
TspRI CASTG 4 cut(s) 155, 380, 574, 971
Vha464I CTTAAG 1 cut(s) 1127
VneI GTGCAC 1 cut(s) 972
VpaK11BI GGWCC 2 cut(s) 189, 205
XapI RAATTY 3 cut(s) 589, 821, 949
XbaI TCTAGA 1 cut(s) 461
XceI RCATGY 1 cut(s) 563
XcmI CCANNNNNNNNNTGG 1 cut(s) 529
XspI CTAG 4 cut(s) 462, 515, 594, 1055
Zsp2I ATGCAT 2 cut(s) 470, 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.