FvH4_2g29822
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
23058060 .. 23072476
14417 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29822.t1

Sequence Viewer

Length: 3594 bp
ATGACGGTGAGAGAAACTCTGGCTTTTTCAGCAAGATGTCAAGGAGTTGGACCACGTTATGAAATGTTGGTAGAATTATCAAGGAGAGAAAAGACTGCAAATATAATGCCGGATCCTGATCTTGATGTTTACATGAAGGCAGCTGCACTTGAAGGACATGAAACCAATGTAATTACAGATTATATACTGAAGGTTTTGGGGCTTGAAGTTTGTGCCGACACTATAGTAGGGGATCAAATGAGACGAGGTATCTCCGGGGGTCAAAGAAAGCGACTCACCACAGGGGAGATGCTGGTTGGGCCAGCAAGAGCACTTTTCATGGATGAGATATCAACCGGCTTGGACAGTTCAACAACATTTCAGATAGTGAAATCACTTAGACAATCCATCCACATTCTCAATGAAACTGCTGTCATCTCTCTCCTGCAGCCAGCGCCAGAAACTTATGATCTCTTTGATGATATAATTTTACTCTCAGATGGGCACATTGTGTATCAAGGTCCCCGGTGCAATGTGCTTGAGTTCTTTGAGTACATGGGATTTAAATGTCCAGAGAGAAAAGGAGTTGCGGATTTCCTACAAGAAGTAACCTCGAGGAAAGATCAAGAACAATACTGGGCTCATAATGACAAGCCTTATAGCTTTCTAACTTCCAAGGACTTTGCTGAAGCCTTGCAGTCATTTTACATTGGTCGAGAACTTGGTGATGAGCTTTCTATTCCGTTTGATAAGTCTAAAGGCCACCCTGCAGCTTTAACAACTAAGAAGTATGGTGTCAGCAAGAAGGAATTATTCAAAGCTTGTATGTCTAGGCAAATTTTGCTTATGAAGAGGAATTCATTTATCCATATTTTCAAAATTTCACAGATGATTCTAATGTCTTGTGTTACAATAACATTGTTCCTACGAACTGAGATGCACCGGGATTCTGTTGAAGATGGTGTCATATACATGGGAGCATTGTTTTACACAATGATGATAATTATGTTCAATGGGTTCTCAGAGCTTGCCATGACTGTCATGAAGCTTCCTGTGTTTTTCAAGCAAAGGGACCTTCTCTTCTATCCTGCTTGGGCATACTCTTTGCCCACATGGCTGATAAGGATCCCTATGACTTTTGTGGAAGTTTCTATTTGGGTGACCATTACGTACTACACTATAGGTTTTGATCCAAACATTGAAAGGTTCTTCAAACAGTTCCTTTCACTGCTGCTTATTAGCCAAATGGCAACTGGCCTGTTCCGACTGATAGGCGCATTAGGAAGAAACATGATTGTTGCGAACACATTTGGATCTGTTGCTTTGCTTGTGCTGTTTGTTCTTGGTGGATTCATCTTATCACGAGAGGATATGAAAAGCTGGTTGGTGTGGGGATATTATCTGTCTCCAATGTCGTATGGACTGAATGCCCTAGCTGTCAATGAATTTCTTGGAAAAAGTTGGAGACATTCTCCTACCAACTCAACTGAACTTTTAGGAGTAATAGTCTTGAAATCACGAGGGGTTTTCCCAGAAGCACGATGGTACTGGATTGGAGTAGTAGCTTTATTTGGATTTATTCTTCTATTCAACCTCCTTTTCATTCTGGCACTTCATTATCTTGAACCTCTTGATAAGCCTCAGGCAGTACTCTCCAAAGAGGCCTTGGCAAAGAAACAAGCCACCGAAACTGGAGAAGCCATTGAATTAGTTTCAACACAAAAGAGTTATATTGGTGCAGCTAATGAAAGACTAGACAATGTGTCAGTCAATCTGACCAGCCAGCGAGGAATGGTTCTTCCTTTTGAACCCCTCTCAATTACATTTGACGAAATCAGATATGCAGTTGACATGCCAGTGGAAATGAAAGGTCAAGGTGTAACACAGGATCGGTTAGAACTTCTGAAGGGTGTAAGTGGTGCTTTTAGGCCTGGAGTCCTAACAGCTCTAATGGGGGTCAGTGGCGCTGGAAAGACTACTCTAATGGATGTCTTGGCAGGAAGGAAAACTGGTGGATATATTGAAGGAAACATTACCATTTCTGGCTATCCGAAAAAGCAAGAAACATTTGCTCGTATATCCGGATATTGTGAGCAAACAGATATACACTCTCCACATGTTACAGTTTATGAGTCTTTGGTTTATTCTGCTTGGCTCCGGTTGCCCCCTGGGGATGATTCCCCCACCAGAAAGATGTTTATTAAGGAAGTCATGGATCTTGTGGAACTGACCCCACTAAGGGATGCACTTGTTGGATTGCCAGGAGTGAATGGTCTTTCAACTGAGCAGCGCAAAAGGCTAACAATTGCAGTAGAGCTTGTTGCCAATCCATCCATAATATTCATGGATGAGCCAACCTCTGGTCTTGATGCCAGGGCAGCAGCAATTGTAATGAGAACTGTGAGGAATACAGTGAACACCGGGAGAACTGTAGTCTGCACCATCCACCAGCCAAGCATTGATATATTTGATGCTTTTGATGAGATGCTACTTTTAAAATGGGGAGGGGAAGAAATATATGTTGGTCCTTTAGGCTACCAGTCTTCCCAGTTGATCGAATACTTTGAGGGGATTAGTGGAGTTCCTAAAATGAAGGATGGTTACAACCCTGCTACTTGGATGTTAGAGGTCACTTCTGCAGCACAAGAAGCAAATCTTGGGGTCAATTTCACCGACATATACAAGAACTCAGAAATGTACAGGAGAAACAAGGAATTGATCAAGGAACTAAGTACTCCACCAGAAAATTCAGTAGACTTACACTTCACAACACAGTATTCTCAATCCTTCTTTACCCAGTGCAATACTTGCCTATGGAAACAGCACCTGTCTTACTGGCGAAATCCCCCATACAGTGCAGCGAGACTTATTTACACAACAATGATGGCTATAGTATTTGGTATATTATTCTTGGGTCTTGGCTCCAAAAGGCAAAAGCAACAAGATCTTTTCAATGTATTAGGCTCTATGTATTCTGCCATTCTCTTCATTGGGATACAAAATGCCTCATCGGTGCAGCCGGTTATAGCTATTGAGAGGATAGTCTTTTACAGAGAAAGGGCAGCTGGAATGTACTCTGCTTTTCCATATGCATTTGGACAGGTTGTCATTGAGATCCCATACACTTTGATCCAAACCATTTTATACGTGGTTATTGTATACACGATGATCGGATATGATTGGACGGTCAGCAAGTTCTTCTGGTATTTTTTCTTCATGTTTTTCAGCTTCTTATACTACACCTTATATGGTATGATGATTGTGGCAATTACTCCCAACACTATGGTCGCTGCTGTGCTTTCCTCATCATTCTACCCGTTATGGAACGTCTTTTCTGGGTTTATCATTCCGAAAACAAGAATTCCAATATGGTGGAGATGGTTCTACTGGTCATGCCCGGTCTCTTGGAGCTTGTACGGATTGATTGGTTCACAGTTCGCAGGCATTGAGGACAGGCTTGATTCCGGCGAAACCGTGGAAGCTTTTACCAGGAGTTATTTTGGGTACAGAGAAGACTTTCTCAATGTTGTTGCGATAGTGCTTGTAGCTATTTCAGTGCTCTTTGGATCCGTCTTTGCTTTTTCAATCAAAGCCTTTAATTTTCAGAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1198

Amino Acids

135.57

Weight (kDa)

6.59

Isoelectric Point (pI)

41.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC2_membrane PF01061 264 - 476 2.6e-50 ABC-2 type transporter
PDR_assoc PF08370 481 - 543 7.3e-27 Plant PDR ABC transporter associated
ABC_tran PF00005 628 - 780 4e-20 ABC transporter
ABC2_membrane PF01061 925 - 1139 1.2e-59 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 592
AccB7I CCANNNNNTGG 1 cut(s) 2339
AccI GTMKAC 2 cut(s) 2733, 3138
AccIII TCCGGA 1 cut(s) 2060
AciI CCGC 1 cut(s) 569
AcsI RAATTY 6 cut(s) 816, 835, 858, 1424, 2725, 3339
AcuI CTGAAG 3 cut(s) 209, 687, 1904
AdeI CACNNNGTG 1 cut(s) 490
AfaI GTAC 9 cut(s) 533, 1151, 1526, 1629, 2678, 2713, 3053, 3395, 3485
AfiI CCNNNNNNNGG 3 cut(s) 2217, 2218, 2339
AflIII ACRYGT 1 cut(s) 2095
AhdI GACNNNNNGTC 2 cut(s) 1741, 3083
AjnI CCWGG 5 cut(s) 1909, 2146, 2239, 2351, 3467
AjuI GAANNNNNNNTTGG 6 cut(s) 1346, 1378, 2484, 2516, 2619, 2651
Alw21I GWGCWC 2 cut(s) 313, 3540
Alw26I GTCTC 5 cut(s) 235, 1389, 1438, 2836, 3385
AlwNI CAGNNNCTG 1 cut(s) 2806
Ama87I CYCGRG 1 cut(s) 592
Aor13HI TCCGGA 1 cut(s) 2060
AoxI GGCC 5 cut(s) 299, 739, 1234, 1641, 1907
ApoI RAATTY 6 cut(s) 816, 835, 858, 1424, 2725, 3339
Asp700I GAANNNNTTC 1 cut(s) 3495
AspLEI GCGC 4 cut(s) 436, 1256, 1946, 2271
AspS9I GGNCC 5 cut(s) 50, 299, 500, 1051, 2504
AsuC2I CCSGG 5 cut(s) 256, 505, 923, 2401, 3377
AsuHPI GGTGA 5 cut(s) 19, 268, 716, 1150, 2641
AvaI CYCGRG 1 cut(s) 592
AvaII GGWCC 4 cut(s) 50, 500, 1051, 2504
AxyI CCTNAGG 1 cut(s) 1620
BaeGI GKGCMC 1 cut(s) 486
BamHI GGATCC 3 cut(s) 112, 1104, 3545
BanII GRGCYC 1 cut(s) 622
BarI GAAGNNNNNNTAC 4 cut(s) 2564, 2596, 3176, 3208
BauI CACGAG 2 cut(s) 1341, 1497
BbsI GAAGAC 2 cut(s) 2514, 3498
Bbv12I GWGCWC 2 cut(s) 313, 3540
BccI CCATC 9 cut(s) 395, 473, 932, 1515, 2317, 2429, 2570, 2857, 3351
BciT130I CCWGG 5 cut(s) 1911, 2148, 2241, 2353, 3469
BciVI GTATCC 1 cut(s) 2967
BclI TGATCA 1 cut(s) 2697
BcnI CCSGG 5 cut(s) 256, 505, 923, 2401, 3377
BcoDI GTCTC 5 cut(s) 235, 1389, 1438, 2836, 3385
BfaI CTAG 3 cut(s) 810, 1412, 1733
BfmI CTRYAG 7 cut(s) 222, 425, 747, 1158, 2409, 2616, 2868
BfoI RGCGCY 2 cut(s) 437, 1947
BfuI GTATCC 1 cut(s) 2967
BglI GCCNNNNNGGC 1 cut(s) 1093
BglII AGATCT 1 cut(s) 2923
BmcAI AGTACT 2 cut(s) 1629, 2713
Bme18I GGWCC 4 cut(s) 50, 500, 1051, 2504
BmeRI GACNNNNNGTC 2 cut(s) 1741, 3083
BmeT110I CYCGRG 1 cut(s) 592
BmgT120I GGNCC 5 cut(s) 50, 299, 500, 1051, 2504
BmiI GGNNCC 7 cut(s) 114, 502, 1052, 1106, 2135, 2902, 3547
BmrI ACTGGG 3 cut(s) 625, 2521, 2770
BmsI GCATC 6 cut(s) 279, 906, 2212, 2338, 2440, 2454
BmuI ACTGGG 3 cut(s) 625, 2521, 2770
BpiI GAAGAC 2 cut(s) 2514, 3498
BplI GAGNNNNNCTC 5 cut(s) 33, 1435, 1467, 2321, 2353
BpmI CTGGAG 2 cut(s) 1692, 1932
BpuEI CTTGAG 1 cut(s) 539
BpuMI CCSGG 5 cut(s) 256, 505, 923, 2401, 3377
BsaAI YACGTR 2 cut(s) 1149, 3127
BsaBI GATNNNNATC 2 cut(s) 117, 1103
BsaI GGTCTC 1 cut(s) 3385
BsaJI CCNNGG 8 cut(s) 255, 503, 654, 1644, 2146, 2147, 2352, 3453
BsaWI WCCGGW 2 cut(s) 2060, 2136
BsaXI ACNNNNNCTCC 2 cut(s) 1470, 1500
Bsc4I CCNNNNNNNGG 3 cut(s) 2217, 2218, 2339
Bse118I RCCGGY 2 cut(s) 335, 2998
Bse21I CCTNAGG 1 cut(s) 1620
Bse3DI GCAATG 1 cut(s) 517
Bse8I GATNNNNATC 2 cut(s) 117, 1103
BseAI TCCGGA 1 cut(s) 2060
BseBI CCWGG 5 cut(s) 1911, 2148, 2241, 2353, 3469
BseDI CCNNGG 8 cut(s) 255, 503, 654, 1644, 2146, 2147, 2352, 3453
BseJI GATNNNNATC 2 cut(s) 117, 1103
BseLI CCNNNNNNNGG 3 cut(s) 2217, 2218, 2339
BseMI GCAATG 1 cut(s) 517
BseMII CTCAG 6 cut(s) 489, 903, 1014, 1634, 2253, 2682
BseSI GKGCMC 1 cut(s) 486
BsgI GTGCAG 5 cut(s) 129, 1737, 2401, 2856, 3014
BshFI GGCC 5 cut(s) 301, 741, 1236, 1643, 1909
BsiHKAI GWGCWC 2 cut(s) 313, 3540
BsiHKCI CYCGRG 1 cut(s) 592
BslFI GGGAC 2 cut(s) 486, 1064
BslI CCNNNNNNNGG 3 cut(s) 2217, 2218, 2339
BsmAI GTCTC 5 cut(s) 235, 1389, 1438, 2836, 3385
BsmBI CGTCTC 1 cut(s) 235
BsmFI GGGAC 2 cut(s) 486, 1064
BsmI GAATGC 1 cut(s) 1411
BsnI GGCC 5 cut(s) 301, 741, 1236, 1643, 1909
Bso31I GGTCTC 1 cut(s) 3385
BsoBI CYCGRG 1 cut(s) 592
Bsp1286I GDGCHC 4 cut(s) 313, 486, 622, 3540
Bsp13I TCCGGA 1 cut(s) 2060
Bsp1407I TGTACA 1 cut(s) 2676
BspACI CCGC 1 cut(s) 569
BspANI GGCC 5 cut(s) 301, 741, 1236, 1643, 1909
BspCNI CTCAG 6 cut(s) 488, 904, 1013, 1633, 2254, 2681
BspEI TCCGGA 1 cut(s) 2060
BspHI TCATGA 1 cut(s) 1020
BspLI GGNNCC 7 cut(s) 114, 502, 1052, 1106, 2135, 2902, 3547
BspMAI CTGCAG 3 cut(s) 429, 751, 2620
BspTNI GGTCTC 1 cut(s) 3385
BsrDI GCAATG 1 cut(s) 517
BsrFI RCCGGY 2 cut(s) 335, 2998
BsrGI TGTACA 1 cut(s) 2676
BssAI RCCGGY 2 cut(s) 335, 2998
BssECI CCNNGG 8 cut(s) 255, 503, 654, 1644, 2146, 2147, 2352, 3453
BssNAI GTATAC 1 cut(s) 3139
BssSI CACGAG 2 cut(s) 1341, 1497
BssT1I CCWWGG 2 cut(s) 654, 1644
Bst1107I GTATAC 1 cut(s) 3139
Bst2BI CACGAG 2 cut(s) 1341, 1497
Bst2UI CCWGG 5 cut(s) 1911, 2148, 2241, 2353, 3469
Bst6I CTCTTC 4 cut(s) 824, 1064, 2969, 3581
BstAPI GCANNNNNTGC 2 cut(s) 820, 2787
BstAUI TGTACA 1 cut(s) 2676
BstBAI YACGTR 2 cut(s) 1149, 3127
BstC8I GCNNGC 5 cut(s) 303, 432, 1008, 1763, 3421
BstDSI CCRYGG 1 cut(s) 3453
BstEII GGTNACC 1 cut(s) 1138
BstH2I RGCGCY 2 cut(s) 437, 1947
BstHHI GCGC 4 cut(s) 436, 1256, 1946, 2271
BstMAI GTCTC 5 cut(s) 235, 1389, 1438, 2836, 3385
BstNI CCWGG 5 cut(s) 1911, 2148, 2241, 2353, 3469
BstNSI RCATGY 2 cut(s) 1834, 2099
BstPI GGTNACC 1 cut(s) 1138
BstSFI CTRYAG 7 cut(s) 222, 425, 747, 1158, 2409, 2616, 2868
BstSLI GKGCMC 1 cut(s) 486
BstSNI TACGTA 1 cut(s) 1149
BstV2I GAAGAC 2 cut(s) 2514, 3498
BstX2I RGATCY 7 cut(s) 112, 1104, 1292, 2194, 2923, 3093, 3545
BstXI CCANNNNNNTGG 2 cut(s) 3262, 3351
BstYI RGATCY 7 cut(s) 112, 1104, 1292, 2194, 2923, 3093, 3545
BstZ17I GTATAC 1 cut(s) 3139
Bsu36I CCTNAGG 1 cut(s) 1620
BsuI GTATCC 1 cut(s) 2967
BsuRI GGCC 5 cut(s) 301, 741, 1236, 1643, 1909
BtgI CCRYGG 1 cut(s) 3453
BtsI GCAGTG 1 cut(s) 1205
BtsIMutI CAGTG 7 cut(s) 1205, 1842, 1945, 2397, 2783, 2839, 3540
Cac8I GCNNGC 5 cut(s) 303, 432, 1008, 1763, 3421
CaiI CAGNNNCTG 1 cut(s) 2806
CciI TCATGA 1 cut(s) 1020
CfoI GCGC 4 cut(s) 436, 1256, 1946, 2271
Cfr10I RCCGGY 2 cut(s) 335, 2998
Cfr13I GGNCC 5 cut(s) 50, 299, 500, 1051, 2504
Csp6I GTAC 9 cut(s) 532, 1150, 1525, 1628, 2677, 2712, 3052, 3394, 3484
CviQI GTAC 9 cut(s) 532, 1150, 1525, 1628, 2677, 2712, 3052, 3394, 3484
DraI TTTAAA 2 cut(s) 544, 2475
DraIII CACNNNGTG 1 cut(s) 490
DriI GACNNNNNGTC 2 cut(s) 1741, 3083
Eam1104I CTCTTC 4 cut(s) 824, 1064, 2969, 3581
Eam1105I GACNNNNNGTC 2 cut(s) 1741, 3083
EarI CTCTTC 4 cut(s) 824, 1064, 2969, 3581
Eco105I TACGTA 1 cut(s) 1149
Eco130I CCWWGG 2 cut(s) 654, 1644
Eco147I AGGCCT 2 cut(s) 1643, 1909
Eco24I GRGCYC 1 cut(s) 622
Eco31I GGTCTC 1 cut(s) 3385
Eco32I GATATC 1 cut(s) 330
Eco47I GGWCC 4 cut(s) 50, 500, 1051, 2504
Eco57I CTGAAG 3 cut(s) 209, 687, 1904
Eco81I CCTNAGG 1 cut(s) 1620
Eco88I CYCGRG 1 cut(s) 592
Eco91I GGTNACC 1 cut(s) 1138
EcoO109I RGGNCCY 2 cut(s) 500, 1051
EcoO65I GGTNACC 1 cut(s) 1138
EcoRI GAATTC 2 cut(s) 835, 3339
EcoRII CCWGG 5 cut(s) 1909, 2146, 2239, 2351, 3467
EcoRV GATATC 1 cut(s) 330
EcoT14I CCWWGG 2 cut(s) 654, 1644
EcoT22I ATGCAT 1 cut(s) 3073
EcoT38I GRGCYC 1 cut(s) 622
ErhI CCWWGG 2 cut(s) 654, 1644
Esp3I CGTCTC 1 cut(s) 235
FalI AAGNNNNNCTT 4 cut(s) 1885, 1917, 2619, 2651
FaqI GGGAC 2 cut(s) 486, 1064
FauNDI CATATG 1 cut(s) 3067
FbaI TGATCA 1 cut(s) 2697
FblI GTMKAC 2 cut(s) 2733, 3138
FriOI GRGCYC 1 cut(s) 622
FspBI CTAG 3 cut(s) 810, 1412, 1733
GlaI GCGC 4 cut(s) 435, 1255, 1945, 2270
GsuI CTGGAG 2 cut(s) 1692, 1932
HaeII RGCGCY 2 cut(s) 437, 1947
HaeIII GGCC 5 cut(s) 301, 741, 1236, 1643, 1909
HhaI GCGC 4 cut(s) 436, 1256, 1946, 2271
Hin6I GCGC 4 cut(s) 434, 1254, 1944, 2269
HinP1I GCGC 4 cut(s) 434, 1254, 1944, 2269
HincII GTYRAC 1 cut(s) 1828
HindII GTYRAC 1 cut(s) 1828
HindIII AAGCTT 3 cut(s) 798, 1025, 3459
HinfI GANTC 8 cut(s) 273, 871, 926, 1329, 1914, 2111, 2156, 3440
HphI GGTGA 5 cut(s) 19, 268, 716, 1150, 2641
Hpy166II GTNNAC 6 cut(s) 130, 1828, 2395, 2734, 3139, 3410
Hpy8I GTNNAC 6 cut(s) 130, 1828, 2395, 2734, 3139, 3410
HpyCH4IV ACGT 4 cut(s) 55, 1148, 3126, 3306
HpySE526I ACGT 4 cut(s) 55, 1148, 3126, 3306
HspAI GCGC 4 cut(s) 434, 1254, 1944, 2269
Kpn2I TCCGGA 1 cut(s) 2060
Ksp22I TGATCA 1 cut(s) 2697
LmnI GCTCC 4 cut(s) 956, 2139, 2906, 3387
LweI GCATC 6 cut(s) 279, 906, 2212, 2338, 2440, 2454
MaeI CTAG 3 cut(s) 810, 1412, 1733
MaeII ACGT 4 cut(s) 55, 1148, 3126, 3306
MaeIII GTNAC 7 cut(s) 586, 886, 1138, 1858, 2098, 2579, 2608
MfeI CAATTG 2 cut(s) 2283, 2364
MflI RGATCY 7 cut(s) 112, 1104, 1292, 2194, 2923, 3093, 3545
MhlI GDGCHC 4 cut(s) 313, 486, 622, 3540
MlyI GAGTC 3 cut(s) 267, 1923, 2120
MmeI TCCRAC 4 cut(s) 28, 1267, 1421, 2212
Mph1103I ATGCAT 1 cut(s) 3073
MroI TCCGGA 1 cut(s) 2060
MroXI GAANNNNTTC 1 cut(s) 3495
MseI TTAA 5 cut(s) 543, 755, 2181, 2474, 3576
MslI CAYNNNNRTG 4 cut(s) 950, 974, 1835, 2858
MspA1I CMGCKG 2 cut(s) 143, 3044
MunI CAATTG 2 cut(s) 2283, 2364
Mva1269I GAATGC 1 cut(s) 1411
MvaI CCWGG 5 cut(s) 1911, 2148, 2241, 2353, 3469
NciI CCSGG 5 cut(s) 256, 505, 923, 2401, 3377
NdeI CATATG 1 cut(s) 3067
NlaIV GGNNCC 7 cut(s) 114, 502, 1052, 1106, 2135, 2902, 3547
NmuCI GTSAC 2 cut(s) 1138, 2608
NsiI ATGCAT 1 cut(s) 3073
NspI RCATGY 2 cut(s) 1834, 2099
PaeR7I CTCGAG 1 cut(s) 592
PagI TCATGA 1 cut(s) 1020
PasI CCCWGGG 1 cut(s) 2147
PceI AGGCCT 2 cut(s) 1643, 1909
PciI ACATGT 1 cut(s) 2095
PctI GAATGC 1 cut(s) 1411
PdmI GAANNNNTTC 1 cut(s) 3495
PfeI GAWTC 5 cut(s) 871, 926, 1329, 2156, 3440
PflMI CCANNNNNTGG 1 cut(s) 2339
PleI GAGTC 3 cut(s) 267, 1922, 2119
PpsI GAGTC 3 cut(s) 267, 1922, 2119
Ppu21I YACGTR 2 cut(s) 1149, 3127
PpuMI RGGWCCY 2 cut(s) 500, 1051
PscI ACATGT 1 cut(s) 2095
Psp5II RGGWCCY 2 cut(s) 500, 1051
Psp6I CCWGG 5 cut(s) 1909, 2146, 2239, 2351, 3467
PspEI GGTNACC 1 cut(s) 1138
PspGI CCWGG 5 cut(s) 1909, 2146, 2239, 2351, 3467
PspN4I GGNNCC 7 cut(s) 114, 502, 1052, 1106, 2135, 2902, 3547
PspPI GGNCC 5 cut(s) 50, 299, 500, 1051, 2504
PspPPI RGGWCCY 2 cut(s) 500, 1051
PspXI VCTCGAGB 1 cut(s) 592
PstI CTGCAG 3 cut(s) 429, 751, 2620
PstNI CAGNNNCTG 1 cut(s) 2806
PsuI RGATCY 7 cut(s) 112, 1104, 1292, 2194, 2923, 3093, 3545
PvuII CAGCTG 2 cut(s) 143, 3044
RsaI GTAC 9 cut(s) 533, 1151, 1526, 1629, 2678, 2713, 3053, 3395, 3485
RsaNI GTAC 9 cut(s) 532, 1150, 1525, 1628, 2677, 2712, 3052, 3394, 3484
RseI CAYNNNNRTG 4 cut(s) 950, 974, 1835, 2858
SaqAI TTAA 5 cut(s) 543, 755, 2181, 2474, 3576
Sau96I GGNCC 5 cut(s) 50, 299, 500, 1051, 2504
ScaI AGTACT 2 cut(s) 1629, 2713
SchI GAGTC 3 cut(s) 267, 1923, 2120
SduI GDGCHC 4 cut(s) 313, 486, 622, 3540
SfaNI GCATC 6 cut(s) 279, 906, 2212, 2338, 2440, 2454
SfcI CTRYAG 7 cut(s) 222, 425, 747, 1158, 2409, 2616, 2868
Sfr274I CTCGAG 1 cut(s) 592
SinI GGWCC 4 cut(s) 50, 500, 1051, 2504
SlaI CTCGAG 1 cut(s) 592
SmiI ATTTAAAT 1 cut(s) 544
SmiMI CAYNNNNRTG 4 cut(s) 950, 974, 1835, 2858
SmlI CTYRAG 2 cut(s) 518, 592
SmoI CTYRAG 2 cut(s) 518, 592
SnaBI TACGTA 1 cut(s) 1149
SseBI AGGCCT 2 cut(s) 1643, 1909
SsiI CCGC 1 cut(s) 569
SspI AATATT 1 cut(s) 2319
SspMI CTAG 3 cut(s) 810, 1412, 1733
StuI AGGCCT 2 cut(s) 1643, 1909
StyI CCWWGG 2 cut(s) 654, 1644
SwaI ATTTAAAT 1 cut(s) 544
TaiI ACGT 4 cut(s) 58, 1151, 3129, 3309
TaqI TCGA 3 cut(s) 593, 694, 2535
TatI WGTACW 5 cut(s) 531, 1627, 2676, 2711, 3051
TfiI GAWTC 5 cut(s) 871, 926, 1329, 2156, 3440
Tru1I TTAA 5 cut(s) 543, 755, 2181, 2474, 3576
Tru9I TTAA 5 cut(s) 543, 755, 2181, 2474, 3576
TscAI CASTG 7 cut(s) 1212, 1842, 1945, 2397, 2783, 2839, 3540
TseFI GTSAC 2 cut(s) 1138, 2608
Tsp45I GTSAC 2 cut(s) 1138, 2608
TspGWI ACGGA 3 cut(s) 711, 3411, 3538
TspRI CASTG 7 cut(s) 1212, 1842, 1945, 2397, 2783, 2839, 3540
Van91I CCANNNNNTGG 1 cut(s) 2339
VpaK11BI GGWCC 4 cut(s) 50, 500, 1051, 2504
XapI RAATTY 6 cut(s) 816, 835, 858, 1424, 2725, 3339
XceI RCATGY 2 cut(s) 1834, 2099
XcmI CCANNNNNNNNNTGG 5 cut(s) 1229, 1518, 1642, 2320, 3124
XhoI CTCGAG 1 cut(s) 592
XmiI GTMKAC 2 cut(s) 2733, 3138
XmnI GAANNNNTTC 1 cut(s) 3495
XspI CTAG 3 cut(s) 810, 1412, 1733
ZrmI AGTACT 2 cut(s) 1629, 2713
Zsp2I ATGCAT 1 cut(s) 3073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.