Rmu_sc0001030.1_g000012
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001030.1
Physical Location & Seq
Reverse (-)
46315 .. 53415
7101 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001030.1_g000012.1.cds

Sequence Viewer

Length: 4227 bp
atgacgacatggggtgccattgagagactgcctacgtattcacgcacaaggagaggcattctactcggtcaaggtcaagaggaggacggtgaaagcagagagattgatataaagaagaatcttggactaccagagaggaagactttgttggagaggctagtgaagattgttgagcaagacaatgacaagttcttgctcaagatcaaggaccgcatgaatagagttggacttgaatttccaacaactgaagtgcggttcgagaatttaaatgttgaagcagaagcttatgtaggaagcagggcatcatctacaatgttcaacttctctattaatatgttagaggggttcctgaattattttcacattcttccaagtagaaagagaccatttacaatcctccatgatgtaagcgggattatcaagccaagaagaatgacacttcttttaggcccccctggctctggaaagacgacgttactattggccttggctggaaaactcggtaaagctaatctaaaattttcggggagagttacatacaatggaattgagatggatgagtttgtatcagagaggacatcagcttatgtcagtcaacatgatctccacataccagaattgacagtgagagaaacactggcttttgcagctagatgtcaaggtgttggaccgcgttatgaaatgttggtggaattattaaggagagaaaaggctgcaaatattatgccagatcttgatcttgatctctacatgaaggcagcagcactagaaggacaggaaactaatattgttacagactttattctcaaggttttgggactcgaagattgtgctgacattatggtaggagatgaaatgaccagaggtatctctggtggacaaaaaaagcgactcaccacaggggagatgctggttggaccagaaagagtacttcttatggatgagatatcaaacgggctggacagttcaacaacattgcaaatagtgaaatcactacaacaatacgtccacattctcaacggaactgcattgattgctctactgcagccagcaccagagacttatgatctcttcgatgatataattctcctttcggatggctacattgtgtatcaaggtccccgtgagaatgttcttgagttctttgagtacatgggcttcaaatgtccagagaggaaaggagttgctgatttcctacaagaggtgacatcaagaaaagatcaagagcaatactgggctcatatggataggccttatagctttgtaacaaccaaagaattttctgaagcaatgcagttatttcacattggtagaaaacttggtgatgagctttctattccatttaacaagtcagaaggctgccgtgctgctttgtcaactaaaaaatatggtgttagtaagaaggaaatgttcaaagcttgtatggccagacaaattttgcttacaaagaggaattcatttgtctacattttcaaattggtgcagcttattctagttgctgttacaacaatgacactattttttcgtactgagatggagcgaaacacagtagaagatggtaggatttatacgggagctttattctatacgctactcgcaattatgcttaatgggtttgcagagcttcatatgacagtcactagactgcctgtgtttttcaagcaaagggaccatctgttctatcctgcttgggcatactctttacccccatggctgataaggatccctataacttttgtggacgttttcatctggatgatcattacttactacagtgtaggttatgatccgagcattgcaagatttttcaaacaattccttctcctgctgtgtattagccagatggcaaatggactgtttcgattgataggggcactagggaggaatataactattgcaaatacatttggatttggtactttacttgtcattcttggtctgtgtggctttatcatttcaaaagaggatttgaagaaatggttgttgtggggatattggctctcaccaatcacgtatggactgaatgccatcgctgttaatgaatttcttggaaaaagttggagacatgttcctgccaactcaacagaagcattaggagttatggtcttgaagtatcaaggcatacccccagaggcacgcttctactggattggattagtagctttgattggatttattcttctgttgaatttccttttcaccttggcacttcagtatcttgatcgtaagtgcctaggcatattatcttctgtttacacatggacactagcattgttatgttttgacaatcctaacaatttcctggatgcagcacttgagatgccccatgcagtactatacaatgaggcatcctctacaacagaggatagcaaagttgcaagcgatcctactatgcagcatggcatggttcttccatttgaacccctttcaattactttcgaggaaatcagatatgctgtcgatatgcctgaggaaatgaaagatcaaagcaaaactcaggataggctagaacttctgaagggtgtgagtggtgcttttaggcctggagttctaacagctttgatgggtgttagtggtgctggaaaaaccactctcatggatgtcttggcaggaaggaagacaagtgggtatattgaggggaggatcaccttatctggatatgcaaaaaggcaagaaacatttgctcgcatatcaggatactgtgaacaaacagatatacactcccctcatgtcacagtttacgagtctttggtttactctgcatggctccggttgccccaggaggttgattccccaaccagaaagatgtttattgaggaggttatggagcttgtagaaatgaccacaataagtgacagacttgttggattgccaggagtgaatggtctctcaactgaacaacgcaaaaggctaacaattgcagtagagcttgttgccaacccctcgataatatttatggatgagccgacttctggccttgatgctagggcagcagcaattgtaatgagaacggtgaggaatacagtggacactgggagaactgtagtctgtacaatccaccaaccaagcattgatatatttgatgcatttgatgagatgttgcttctgaaacagggaggcgaagaaatatatgttggccctttaggccaccattcttcccagatgatcgaatactttgaggagattagtggagtttctaaaatcaaggatggttacaatccagcaacctggatgttggaggttacttctccagcacaagaagcatctcttggggttgattttgccaaaatatacaagaattcagaaatatataggacaaataaggcattgataaaggaactaagtactcctgcaccaaattcaaaggacttgtacttcccaacacaatattcgcagtctttctttacccagtgtctagcttgcctatggaaacagagtgtatcatattggcgaaaccctcaatacaccgcagtaagacttcttttcacagctatgatggccggactacttgggtcatttttctgggatcttggctccaaaagacaaaagcaaagagatctcttttgtgcgatgggttctatgtatgctgctgtgctttttcttggtatacaaaattccttgtcagtgcagccaatcataggtgttgagaggttggtctcttacagagaaacggctgctggaatgtactcagcttttccatttgcctttggacaggctatcattgagatcccgtacactttgatccagactattatatatggggtcatagtatactccatggtcggatttgattggacagtcagcaagttcttttgttatctcttgttcatgtacctcaccttcttatacttcaccttccatggcatgatgattgtggccattactcccaacaacaccatctctgctgtagtttcgtctgccttctatccattatggaatgttatttcaggatatctcattcccaaaacaagaattccaatatggtggagatggttctattgggtcagcccaacctcttggagcttgtatggattgttttcttcacagtttggaggtctcaaggacacacttgattctggtgaaactgtagatcattttatgaggacatattttggatataggaaagactttctaggtgttgttgtagctgtacttgttgggttttcagcgttctttgttttcatctttgcttttgcgatcaagaaactaaacttccaaaagagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1408

Amino Acids

159.58

Weight (kDa)

6.86

Isoelectric Point (pI)

36.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 14
AccI GTMKAC 3 cut(s) 1464, 3607, 3771
AccII CGCG 1 cut(s) 673
AciI CCGC 5 cut(s) 211, 253, 411, 671, 3468
AclWI GGATC 8 cut(s) 1717, 1730, 1781, 2378, 2651, 3534, 3721, 3736
AcoI YGGCCR 3 cut(s) 1425, 3498, 3876
AcuI CTGAAG 4 cut(s) 267, 1305, 2195, 2537
AfiI CCNNNNNNNGG 4 cut(s) 461, 1201, 2972, 3638
AflIII ACRYGT 1 cut(s) 2065
AjnI CCWGG 6 cut(s) 454, 2301, 2542, 2778, 2872, 3227
AjuI GAANNNNNNNTTGG 8 cut(s) 131, 163, 3117, 3149, 3252, 3284, 3373, 3405
AloI GAACNNNNNNTCC 2 cut(s) 1661, 1693
Alw26I GTCTC 7 cut(s) 19, 376, 1052, 2056, 2891, 3661, 4061
AlwI GGATC 8 cut(s) 1717, 1730, 1781, 2378, 2651, 3534, 3721, 3736
AseI ATTAAT 1 cut(s) 330
AspA2I CCTAGG 1 cut(s) 2233
AspS9I GGNCC 7 cut(s) 208, 449, 668, 917, 1118, 1669, 3137
AvaII GGWCC 5 cut(s) 208, 668, 917, 1118, 1669
AvrII CCTAGG 1 cut(s) 2233
AxyI CCTNAGG 1 cut(s) 2469
BaeGI GKGCMC 1 cut(s) 1876
BaeI ACNNNNGTAYC 2 cut(s) 2198, 2231
BalI TGGCCA 2 cut(s) 1427, 3878
BamHI GGATCC 1 cut(s) 1722
BanI GGYRCC 1 cut(s) 14
BanII GRGCYC 1 cut(s) 1240
BarI GAAGNNNNNNTAC 4 cut(s) 1142, 1174, 3824, 3856
BbsI GAAGAC 2 cut(s) 146, 2624
BceAI ACGGC 2 cut(s) 1347, 3687
BcgI CGANNNNNNTGC 4 cut(s) 46, 80, 812, 846
BciT130I CCWGG 6 cut(s) 456, 2303, 2544, 2780, 2874, 3229
BciVI GTATCC 1 cut(s) 2690
BclI TGATCA 1 cut(s) 1758
BcoDI GTCTC 7 cut(s) 19, 376, 1052, 2056, 2891, 3661, 4061
BfmI CTRYAG 5 cut(s) 1043, 1771, 3042, 3906, 4086
BfuI GTATCC 1 cut(s) 2690
BglI GCCNNNNNGGC 2 cut(s) 456, 3144
BglII AGATCT 2 cut(s) 730, 3556
BlnI CCTAGG 1 cut(s) 2233
BmcAI AGTACT 3 cut(s) 930, 2334, 3346
Bme1390I CCNGG 6 cut(s) 456, 2303, 2544, 2780, 2874, 3229
Bme18I GGWCC 5 cut(s) 208, 668, 917, 1118, 1669
BmgT120I GGNCC 7 cut(s) 208, 449, 668, 917, 1118, 1669, 3137
BmiI GGNNCC 8 cut(s) 16, 347, 451, 1120, 1670, 1724, 2768, 3535
BmrFI CCNGG 6 cut(s) 456, 2303, 2544, 2780, 2874, 3229
BmrI ACTGGG 3 cut(s) 1243, 3042, 3403
BmsI GCATC 8 cut(s) 311, 897, 2296, 2310, 2357, 2971, 3073, 3272
BmuI ACTGGG 3 cut(s) 1243, 3042, 3403
BpiI GAAGAC 2 cut(s) 146, 2624
BplI GAGNNNNNCTC 2 cut(s) 2336, 2368
BpmI CTGGAG 2 cut(s) 2565, 3234
BpuEI CTTGAG 5 cut(s) 182, 791, 1157, 2336, 4043
BsaAI YACGTR 2 cut(s) 36, 2013
BsaBI GATNNNNATC 3 cut(s) 735, 741, 1721
BsaI GGTCTC 4 cut(s) 376, 2891, 3661, 4061
BsaJI CCNNGG 8 cut(s) 454, 486, 1709, 2202, 2233, 2778, 3777, 3859
BsaWI WCCGGW 1 cut(s) 2769
BsaXI ACNNNNNCTCC 4 cut(s) 588, 618, 2088, 2118
Bsc4I CCNNNNNNNGG 4 cut(s) 461, 1201, 2972, 3638
Bse1I ACTGG 5 cut(s) 642, 1238, 2150, 3037, 3409
Bse21I CCTNAGG 1 cut(s) 2469
Bse3DI GCAATG 3 cut(s) 974, 1296, 1794
Bse8I GATNNNNATC 3 cut(s) 735, 741, 1721
BseBI CCWGG 6 cut(s) 456, 2303, 2544, 2780, 2874, 3229
BseDI CCNNGG 8 cut(s) 454, 486, 1709, 2202, 2233, 2778, 3777, 3859
BseJI GATNNNNATC 3 cut(s) 735, 741, 1721
BseLI CCNNNNNNNGG 4 cut(s) 461, 1201, 2972, 3638
BseMI GCAATG 3 cut(s) 974, 1296, 1794
BseMII CTCAG 4 cut(s) 1521, 2460, 2510, 3702
BseNI ACTGG 5 cut(s) 642, 1238, 2150, 3037, 3409
BseRI GAGGAG 3 cut(s) 95, 2831, 3194
BseSI GKGCMC 1 cut(s) 1876
BsgI GTGCAG 3 cut(s) 1502, 3336, 3647
Bsh1236I CGCG 1 cut(s) 673
BshNI GGYRCC 1 cut(s) 14
BsiSI CCGG 2 cut(s) 2770, 3501
BslFI GGGAC 3 cut(s) 831, 1104, 1682
BslI CCNNNNNNNGG 4 cut(s) 461, 1201, 2972, 3638
BsmAI GTCTC 7 cut(s) 19, 376, 1052, 2056, 2891, 3661, 4061
BsmFI GGGAC 3 cut(s) 831, 1104, 1682
BsmI GAATGC 2 cut(s) 57, 2029
Bso31I GGTCTC 4 cut(s) 376, 2891, 3661, 4061
Bsp1286I GDGCHC 2 cut(s) 1240, 1876
Bsp1407I TGTACA 1 cut(s) 3050
Bsp19I CCATGG 3 cut(s) 1709, 3777, 3859
BspACI CCGC 5 cut(s) 211, 253, 411, 671, 3468
BspCNI CTCAG 4 cut(s) 1522, 2461, 2509, 3701
BspFNI CGCG 1 cut(s) 673
BspLI GGNNCC 8 cut(s) 16, 347, 451, 1120, 1670, 1724, 2768, 3535
BspMAI CTGCAG 1 cut(s) 1047
BspPI GGATC 8 cut(s) 1717, 1730, 1781, 2378, 2651, 3534, 3721, 3736
BspT107I GGYRCC 1 cut(s) 14
BspTNI GGTCTC 4 cut(s) 376, 2891, 3661, 4061
BsrDI GCAATG 3 cut(s) 974, 1296, 1794
BsrGI TGTACA 1 cut(s) 3050
BsrI ACTGG 5 cut(s) 642, 1238, 2150, 3037, 3409
BssECI CCNNGG 8 cut(s) 454, 486, 1709, 2202, 2233, 2778, 3777, 3859
BssNAI GTATAC 2 cut(s) 3608, 3772
BssT1I CCWWGG 6 cut(s) 486, 1709, 2202, 2233, 3777, 3859
Bst1107I GTATAC 2 cut(s) 3608, 3772
Bst2UI CCWGG 6 cut(s) 456, 2303, 2544, 2780, 2874, 3229
Bst6I CTCTTC 1 cut(s) 1076
BstAPI GCANNNNNTGC 1 cut(s) 1034
BstAUI TGTACA 1 cut(s) 3050
BstBAI YACGTR 2 cut(s) 36, 2013
BstC8I GCNNGC 5 cut(s) 1050, 2137, 2380, 2686, 3421
BstDEI CTNAG 5 cut(s) 1530, 2469, 2496, 3341, 3688
BstDSI CCRYGG 3 cut(s) 1709, 3777, 3859
BstENI CCTNNNNNAGG 1 cut(s) 1199
BstFNI CGCG 1 cut(s) 673
BstMAI GTCTC 7 cut(s) 19, 376, 1052, 2056, 2891, 3661, 4061
BstMWI GCNNNNNNNGC 9 cut(s) 456, 647, 1034, 1424, 2773, 2990, 3144, 3260, 3497
BstNI CCWGG 6 cut(s) 456, 2303, 2544, 2780, 2874, 3229
BstNSI RCATGY 1 cut(s) 2069
BstSCI CCNGG 6 cut(s) 454, 2301, 2542, 2778, 2872, 3227
BstSFI CTRYAG 5 cut(s) 1043, 1771, 3042, 3906, 4086
BstSLI GKGCMC 1 cut(s) 1876
BstSNI TACGTA 1 cut(s) 36
BstUI CGCG 1 cut(s) 673
BstV2I GAAGAC 2 cut(s) 146, 2624
BstX2I RGATCY 5 cut(s) 730, 1722, 3526, 3556, 3726
BstXI CCANNNNNNTGG 4 cut(s) 2596, 3228, 3984, 4017
BstYI RGATCY 5 cut(s) 730, 1722, 3526, 3556, 3726
BstZ17I GTATAC 2 cut(s) 3608, 3772
Bsu36I CCTNAGG 1 cut(s) 2469
BsuI GTATCC 1 cut(s) 2690
BtgI CCRYGG 3 cut(s) 1709, 3777, 3859
BtgZI GCGATG 2 cut(s) 2014, 3584
BtsIMutI CAGTG 7 cut(s) 630, 635, 1780, 3030, 3030, 3416, 3630
Cac8I GCNNGC 5 cut(s) 1050, 2137, 2380, 2686, 3421
Cfr13I GGNCC 7 cut(s) 208, 449, 668, 917, 1118, 1669, 3137
DdeI CTNAG 5 cut(s) 1530, 2469, 2496, 3341, 3688
DraI TTTAAA 1 cut(s) 267
EaeI YGGCCR 3 cut(s) 1425, 3498, 3876
Eam1104I CTCTTC 1 cut(s) 1076
EarI CTCTTC 1 cut(s) 1076
Eco105I TACGTA 1 cut(s) 36
Eco130I CCWWGG 6 cut(s) 486, 1709, 2202, 2233, 3777, 3859
Eco147I AGGCCT 2 cut(s) 1252, 2542
Eco24I GRGCYC 1 cut(s) 1240
Eco31I GGTCTC 4 cut(s) 376, 2891, 3661, 4061
Eco32I GATATC 2 cut(s) 948, 3953
Eco47I GGWCC 5 cut(s) 208, 668, 917, 1118, 1669
Eco57I CTGAAG 4 cut(s) 267, 1305, 2195, 2537
Eco81I CCTNAGG 1 cut(s) 2469
EcoNI CCTNNNNNAGG 1 cut(s) 1199
EcoO109I RGGNCCY 2 cut(s) 449, 1118
EcoRI GAATTC 3 cut(s) 1453, 3298, 3972
EcoRII CCWGG 6 cut(s) 454, 2301, 2542, 2778, 2872, 3227
EcoRV GATATC 2 cut(s) 948, 3953
EcoT14I CCWWGG 6 cut(s) 486, 1709, 2202, 2233, 3777, 3859
EcoT22I ATGCAT 1 cut(s) 3088
EcoT38I GRGCYC 1 cut(s) 1240
ErhI CCWWGG 6 cut(s) 486, 1709, 2202, 2233, 3777, 3859
FalI AAGNNNNNCTT 2 cut(s) 3252, 3284
FaqI GGGAC 3 cut(s) 831, 1104, 1682
FauI CCCGC 1 cut(s) 404
FauNDI CATATG 2 cut(s) 1242, 1629
FbaI TGATCA 1 cut(s) 1758
FblI GTMKAC 3 cut(s) 1464, 3607, 3771
FriOI GRGCYC 1 cut(s) 1240
GsuI CTGGAG 2 cut(s) 2565, 3234
HapII CCGG 2 cut(s) 2770, 3501
HincII GTYRAC 2 cut(s) 596, 1377
HindII GTYRAC 2 cut(s) 596, 1377
HindIII AAGCTT 2 cut(s) 282, 1416
HinfI GANTC 6 cut(s) 118, 819, 891, 2744, 2789, 4073
HpaII CCGG 2 cut(s) 2770, 3501
Hpy99I CGWCG 1 cut(s) 475
HpyCH4IV ACGT 5 cut(s) 35, 473, 1005, 1743, 2012
HpyF10VI GCNNNNNNNGC 9 cut(s) 456, 647, 1034, 1424, 2773, 2990, 3144, 3260, 3497
HpyF3I CTNAG 5 cut(s) 1530, 2469, 2496, 3341, 3688
HpySE526I ACGT 5 cut(s) 35, 473, 1005, 1743, 2012
Ksp22I TGATCA 1 cut(s) 1758
LmnI GCTCC 6 cut(s) 1537, 1574, 2772, 2827, 3539, 4020
LweI GCATC 8 cut(s) 311, 897, 2296, 2310, 2357, 2971, 3073, 3272
MaeII ACGT 5 cut(s) 35, 473, 1005, 1743, 2012
MfeI CAATTG 2 cut(s) 2916, 2997
MflI RGATCY 5 cut(s) 730, 1722, 3526, 3556, 3726
MhlI GDGCHC 2 cut(s) 1240, 1876
MlsI TGGCCA 2 cut(s) 1427, 3878
MluNI TGGCCA 2 cut(s) 1427, 3878
MlyI GAGTC 3 cut(s) 813, 885, 2753
MmeI TCCRAC 9 cut(s) 129, 205, 263, 646, 895, 2039, 2845, 3216, 3763
Mox20I TGGCCA 2 cut(s) 1427, 3878
Mph1103I ATGCAT 1 cut(s) 3088
MscI TGGCCA 2 cut(s) 1427, 3878
MseI TTAA 6 cut(s) 266, 330, 698, 1344, 1608, 2037
MslI CAYNNNNRTG 4 cut(s) 1754, 2275, 2594, 3491
Msp20I TGGCCA 2 cut(s) 1427, 3878
MspI CCGG 2 cut(s) 2770, 3501
MspR9I CCNGG 6 cut(s) 456, 2303, 2544, 2780, 2874, 3229
MunI CAATTG 2 cut(s) 2916, 2997
Mva1269I GAATGC 2 cut(s) 57, 2029
MvaI CCWGG 6 cut(s) 456, 2303, 2544, 2780, 2874, 3229
MvnI CGCG 1 cut(s) 673
MwoI GCNNNNNNNGC 9 cut(s) 456, 647, 1034, 1424, 2773, 2990, 3144, 3260, 3497
NcoI CCATGG 3 cut(s) 1709, 3777, 3859
NdeI CATATG 2 cut(s) 1242, 1629
NlaIV GGNNCC 8 cut(s) 16, 347, 451, 1120, 1670, 1724, 2768, 3535
NmuCI GTSAC 4 cut(s) 1204, 1636, 2731, 2852
NsiI ATGCAT 1 cut(s) 3088
NspI RCATGY 1 cut(s) 2069
PceI AGGCCT 2 cut(s) 1252, 2542
PciI ACATGT 1 cut(s) 2065
PctI GAATGC 2 cut(s) 57, 2029
PfeI GAWTC 3 cut(s) 118, 2789, 4073
PfoI TCCNGGA 1 cut(s) 2301
PleI GAGTC 3 cut(s) 813, 885, 2752
PpsI GAGTC 3 cut(s) 813, 885, 2752
Ppu21I YACGTR 2 cut(s) 36, 2013
PpuMI RGGWCCY 1 cut(s) 1118
PscI ACATGT 1 cut(s) 2065
PshBI ATTAAT 1 cut(s) 330
Psp5II RGGWCCY 1 cut(s) 1118
Psp6I CCWGG 6 cut(s) 454, 2301, 2542, 2778, 2872, 3227
PspGI CCWGG 6 cut(s) 454, 2301, 2542, 2778, 2872, 3227
PspN4I GGNNCC 8 cut(s) 16, 347, 451, 1120, 1670, 1724, 2768, 3535
PspPI GGNCC 7 cut(s) 208, 449, 668, 917, 1118, 1669, 3137
PspPPI RGGWCCY 1 cut(s) 1118
PstI CTGCAG 1 cut(s) 1047
PsuI RGATCY 5 cut(s) 730, 1722, 3526, 3556, 3726
RseI CAYNNNNRTG 4 cut(s) 1754, 2275, 2594, 3491
SaqAI TTAA 6 cut(s) 266, 330, 698, 1344, 1608, 2037
Sau96I GGNCC 7 cut(s) 208, 449, 668, 917, 1118, 1669, 3137
ScaI AGTACT 3 cut(s) 930, 2334, 3346
SchI GAGTC 3 cut(s) 813, 885, 2753
ScrFI CCNGG 6 cut(s) 456, 2303, 2544, 2780, 2874, 3229
SduI GDGCHC 2 cut(s) 1240, 1876
SfaNI GCATC 8 cut(s) 311, 897, 2296, 2310, 2357, 2971, 3073, 3272
SfcI CTRYAG 5 cut(s) 1043, 1771, 3042, 3906, 4086
SfiI GGCCNNNNNGGCC 1 cut(s) 3144
SinI GGWCC 5 cut(s) 208, 668, 917, 1118, 1669
SmiI ATTTAAAT 1 cut(s) 267
SmiMI CAYNNNNRTG 4 cut(s) 1754, 2275, 2594, 3491
SmlI CTYRAG 5 cut(s) 197, 806, 1136, 2315, 4058
SmoI CTYRAG 5 cut(s) 197, 806, 1136, 2315, 4058
SnaBI TACGTA 1 cut(s) 36
SseBI AGGCCT 2 cut(s) 1252, 2542
SsiI CCGC 5 cut(s) 211, 253, 411, 671, 3468
SspI AATATT 4 cut(s) 721, 787, 2952, 3389
StuI AGGCCT 2 cut(s) 1252, 2542
StyD4I CCNGG 6 cut(s) 454, 2301, 2542, 2778, 2872, 3227
StyI CCWWGG 6 cut(s) 486, 1709, 2202, 2233, 3777, 3859
SwaI ATTTAAAT 1 cut(s) 267
TaiI ACGT 5 cut(s) 38, 476, 1008, 1746, 2015
TaqI TCGA 8 cut(s) 258, 822, 1074, 1861, 2439, 2460, 2945, 3168
TaqII GACCGA 1 cut(s) 56
TatI WGTACW 8 cut(s) 928, 1149, 2332, 3050, 3344, 3372, 3684, 4150
TfiI GAWTC 3 cut(s) 118, 2789, 4073
Tru1I TTAA 6 cut(s) 266, 330, 698, 1344, 1608, 2037
Tru9I TTAA 6 cut(s) 266, 330, 698, 1344, 1608, 2037
TscAI CASTG 7 cut(s) 630, 642, 1780, 3030, 3037, 3416, 3630
TseFI GTSAC 4 cut(s) 1204, 1636, 2731, 2852
Tsp45I GTSAC 4 cut(s) 1204, 1636, 2731, 2852
TspGWI ACGGA 1 cut(s) 1035
TspRI CASTG 7 cut(s) 630, 642, 1780, 3030, 3037, 3416, 3630
VpaK11BI GGWCC 5 cut(s) 208, 668, 917, 1118, 1669
VspI ATTAAT 1 cut(s) 330
XagI CCTNNNNNAGG 1 cut(s) 1199
XceI RCATGY 1 cut(s) 2069
XcmI CCANNNNNNNNNTGG 1 cut(s) 1847
XmaJI CCTAGG 1 cut(s) 2233
XmiI GTMKAC 3 cut(s) 1464, 3607, 3771
ZrmI AGTACT 3 cut(s) 930, 2334, 3346
Zsp2I ATGCAT 1 cut(s) 3088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.