Prupe.1G471200_v2.0.a1
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000493
Physical Location & Seq
Reverse (-)
39211132 .. 39218483
7352 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G471200.1

Sequence Viewer

Length: 4254 bp
ATGGAAGTCTTTTCGAGGTCTTCTCGAGCAGAAGAAGATGAAGAAGCTCTGAAATGGGCTGCAATAGAGAGGCTCCCTACGTGTTTACGTATAGGGAGAGGTTTGTTCATTGATGGTGAGGGTCAAGCTAGAGCGGTTGATGTAGAGAAACTTGGTTTGCTAGAGAGAAAGACTTTGTTGGAGAGGCTGGTGAGCAATGCAGAGAAAGATAATGAAAAGTTCTTGTTGAAGCTCAAGGAACGGATTGATCGAGTTAGACTTGATGTGCCAACAATTGAAGTTCGGTTCAACCATCTAACTGTTGAGGCAAAAGTTTATATTGGAAGCAGAGCACTGCCCACATTACTCAACTTTGCTATCAATATGTTACAGGGCATGCTACATTATCTTCACATTTTTCCAAGTAGAAAGACACCTTTAACAATCCTTCAAAACATTAGTGGCATCATCAAGCCTCAAAGAATGACTTTGCTTTTAGGTCCCCCAAGCTCTGGAAAGACCACATTACTATTAGCTCTGGCCGGAAGACTTGGTAAAGATTTAAAATCTTCCGGGAGGGTTACATATAATGGACATGGAATGGAAGAATTTGTACCTCAAAGAACATCAGCTTATATAAGTCAAAATGATCTCCACATAGGAGAAATGACAGTGAAAGAGACGTTGGCTTTCTCAGCTAGATGTCAAGGAGTTGGATCAAATTGCGACATGTTGGCAGAACTATGTAGAAGAGAGAAGGAGGAGAATATCAAACCTGACCCTGATATTGACATCTACCTGAAGGCAGCAGCACTAGAAGGGCAGGAGACCAGTGTAGTCACTGATTATATTCTCAAGATTCTGGGACTTGAAGTCTGTGCTAATACTATGGTGGGGGATGAAATGGTAAGAGGCATCTCAGGTGGAGAAAGAAAGCGTGTCACAATAGGGGAGATGCTTGTTGGACCAGTAAGAGCTCTTTTCATGGATGAGATATCAACTGGCTTGGACAGTTCTACAACTTTCCAAATAGTAAATTCACTCAGGCAATCCATCCATATTCTAAGCAGAACTGCAGTTGTCTCCCTCCTTCAGCCAGCCCCCGAAACTTATAGCCTGTTTGATGATATTATTCTTCTCTCAGATGGGCAAATCGTGTATCAGGGTCCACGCGAAAATGTGCTTGAATTTTTTGAATCCATGGGATTCAAGTGTCCTGAGAGGAAAGGAGTTGCTGACTTCTTGCAAGAGGTGACATCAAGGAAAGATCAAGAGCAGTACTGGGCACGTTTAGATGAGCCCTATAGATTTGTTACTGTCAATGATTTCGCCGAAGCATTCCAGTCATTTCCAGTTGGTCAGAAACTTGGTGATGAGCTTGCTGTTCCCTTCGACAAGTCCAAAAGTCACCGTGCTGCTTTGTCAGCCAAGAAGTATGGCGTTAACAAGAAGGAGTTGTTCCGAGCTTGCGTTTCTAGAGAATTCTTGCTGATGAAGAGGAACTCATTTGCCTTCATTTTCAAATTTGCCCTACTTATTATGTTAGCTTCTATAACAGCATCGATATTTCTACGAATTAAGATGCACAAAAACACAGTGGAGGATGGTGGAGTTTATATGGGTGCTTTGTTCTTTGCGGTCATTGTAGCAATGTTTAATGGAATATCAGAACTCAACATGGCCATTATGAAACTTCCTGTCTTCTACAAACAAAGAGATCTTCTCTTCTTTCCTTCATGGGCATACTCTCTACCTGCATGGATCCTCAAGATCCCAATCACTCTTGTAGAAAGTGCCATTTGGGTGGTCATTACTTATTATGTCATAGGATTTGATCCATGTGCAGAAAGGTTGTTCAAGCAGTACATTTTACTCCTGTGCATAAACCAGATGGCATCTGGGATGTTCAGGTTCATGGCAGCCTTAGGAAGGGATGTAATAGTTGCAAGCACAACTGGATCCTTTGCATTGCTTATAATTATGGTTTTGGGTGGATTTGTCTTATCTCGAGAGGCTGTGCCAAAATGGTGGTTGTGGGGTTACTGGATCTCGCCGTTAATGTATGGACAAAATGCTATTACTGTGAATGAATTTCTTGGAAAGAATTGGAGACATGTTCCACCTAATTCGACAGAATCCTTGGGAGTTTTGATCCTGAAGTCTCATGGAATTTTCCCAGAAGCACGATGGTATTGGATTGGAGTAGCGGCTTTATTTGGATATATTTTTCTGTTCAATCTCCTTCTTACTTTGGCTCTGCAGTATCTTGATCCATTTGGTAAGCCTCAGACAGTACTTTCCAAAGAAGGCATGGCTGAAAGAAATGCTAGCACAACTGGAGAGTTCATTGAGCTATTGCCAAGAGGAAAGAGCTCTTCTGGTCAAAGAAGCTTACCGTTATCTGCAAGAGGGGGAAGAACTGATGAAGCTAATGGGAAAAGGAAGCGCGGAATGGTTCTTCCTTTTCAACCGCTTTCCCTTGCTTTCGATGAGATCAGATATGCAATAGATATGCCACAGGAAATGAAAGCTGAGGGTGCTCAAGAGGATCAGTTGGAACTTTTGAAGAGTGTGAGTGGTGCATTTAGGCCAGGAGTCTTAACAGCTCTAATGGGTGTCAGTGGGGCTGGCAAGACCACTCTAATGGATGTGTTGGCTGGAAGGAAAACTGGTGGACATATCAAGGGAAGCATCATGGTATCTGGGTATCCGAAAAGGCAAGAAACATTTGCTCGCATATCAGGATATTGTGAGCAAACTGATATCCACTCTCCTCATGTTACAGTTTATGAATCTCTACTTTTTTCTGCGTGGCTTCGGCTACTCCCTGAGGTTGATTCTGCAACAAGAAAGATGTTCATCGAAGAAGTCATGGAGCTTGTGGAGCTGACTTCATTGAGGGGAGCACTTGTGGGATTACCTAGTGTGACCGGTCTTTCGACTGAGCAGCGCAAAAGGCTGACAATTGCTGTTGAGCTTGTTGCAAATCCATCTATAATCTTCATGGATGAACCAACCTCCGGCCTTGATGCCAGAGCAGCAGCAATCGTGATGAGAACCGTGAGGAACACGGTGGACACAGGAAGAACTGTGGTTTGCACCATCCACCAGCCAAGCATAGACATATTTGATGCATTTGATGAGCTTCTTCTGTTGAAACTGGGAGGTGAGCAAATGTATGGTGGTCCATTAGGCTCCCATTCCTCTCATCTGATCAAGTACTTTGAGGGAATTAATGGAGTTCCTAAAATCAAAGATGGATATAACCCTGCAACCTGGATGTTGGAGATTACTTCGGCTGCGCAAGAGGCAGCTCTCAGGGTTAATTTCACAGAGGTGTACAAGAACTCAGAGCAATTTAAGAGCAGCAAAGCAATGATCAAGGAACTAAGTACACCACCCTCGGGTTCTAGAGATCTATACTTCCCTACTCGCTACTCTCAGTCTTTTCTCATCCAATGTATGGCTTGCCTATGGAAACAGCACTGGTCGTACTGGAGAAACCCATCATATAGTGCAGTAAGGCTGCTATTCACAACGTTCATCGCTTTGTTGTTTGGTTTGATATTCTGGAATCTTGGATCGAAAAGGACAAAGCAGCAAGATCTCTTCAATGCTATGGGCTCCATGTATGCTGCTGTAATCTTTCTCGGGGTACAAAACGGCGCCTCAGTGCAGCCGGTTGTGGCTGTTGAGAGAACAGTCTTTTACAGAGAGAGAGCAGCTGGAATGTATTCGGCTTTGCCCTACGCATTTGGACAGATGATGATTGAGCTTCCCTACATCTTCATTCAGACTGTTATTTATGGATTCATAGTGTATTCCATGATGGGATTTGATTGGATAGCTGCCAAGTTCTTTTGGTTCCTGTTTTTCTTGTACTTCACCTTGTTATACTATACATTGTATGGCATGATGACCATGGCTCTCACTCCCAACCACAACATTGCTGCCATAACCTCATCTAGCTTCTATGCAATATGGAACCTTTTCTCCGGATTTGTTGTTCCTCCAACAAGAATTCCAATATGGTGGAAATGGTACTATTGGGTCTGCCCTGTTGCTTGGACATTGTATGGAATGGTTGCTTCACAATTTGGAGACATAAAGGACACACTGGAGTCGGGGGAATCAGTGGAGCATTTCTTGAGAAGTTACTTTGGATACAAGCATGACTTTTTGGGCATCGTTGCCGTCGTGATTGTTGGATTTTCATTGCTATTCGGCTTCATCTTTGCCTATGGAATTAGAGCATTCAATTTCCAAAAAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1418

Amino Acids

159.54

Weight (kDa)

8.73

Isoelectric Point (pI)

38.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1955
Acc16I TGCGCA 1 cut(s) 3282
Acc36I ACCTGC 1 cut(s) 1741
AccB1I GGYRCC 1 cut(s) 3644
AccB7I CCANNNNNTGG 2 cut(s) 491, 3442
AccBSI CCGCTC 1 cut(s) 134
AccII CGCG 2 cut(s) 1152, 2427
AccIII TCCGGA 1 cut(s) 3974
AciI CCGC 5 cut(s) 134, 1616, 2186, 2427, 2450
AclI AACGTT 1 cut(s) 3518
AcoI YGGCCR 2 cut(s) 519, 1659
AcsI RAATTY 8 cut(s) 587, 1015, 1166, 1460, 1502, 2069, 2148, 3999
AcuI CTGAAG 3 cut(s) 800, 1055, 2156
AcyI GRCGYC 1 cut(s) 3645
AfiI CCNNNNNNNGG 5 cut(s) 491, 1908, 2999, 3383, 3442
AflIII ACRYGT 3 cut(s) 80, 708, 2092
AgeI ACCGGT 1 cut(s) 2909
AhdI GACNNNNNGTC 1 cut(s) 851
AjnI CCWGG 2 cut(s) 2569, 3254
AjuI GAANNNNNNNTTGG 2 cut(s) 647, 679
AleI CACNNNNGTG 1 cut(s) 3314
AloI GAACNNNNNNTCC 4 cut(s) 3956, 3969, 3988, 4001
Alw21I GWGCWC 5 cut(s) 334, 958, 2354, 2521, 2887
Alw26I GTCTC 6 cut(s) 653, 800, 1066, 2083, 2145, 4074
Ama87I CYCGRG 4 cut(s) 24, 1986, 3382, 3629
Aor13HI TCCGGA 1 cut(s) 3974
AoxI GGCC 4 cut(s) 519, 1659, 2567, 3001
ApoI RAATTY 8 cut(s) 587, 1015, 1166, 1460, 1502, 2069, 2148, 3999
ArsI GACNNNNNNTTYG 2 cut(s) 2899, 2931
AseI ATTAAT 1 cut(s) 3213
AsiGI ACCGGT 1 cut(s) 2909
Asp700I GAANNNNTTC 2 cut(s) 3712, 3968
AspLEI GCGC 4 cut(s) 2427, 2931, 3283, 3647
AspS9I GGNCC 4 cut(s) 479, 944, 1145, 3164
AsuC2I CCSGG 1 cut(s) 553
AsuHPI GGTGA 7 cut(s) 128, 202, 1243, 1361, 1379, 3158, 3856
AsuNHI GCTAGC 1 cut(s) 2306
AvaI CYCGRG 4 cut(s) 24, 1986, 3382, 3629
AvaII GGWCC 4 cut(s) 479, 944, 1145, 3164
AxyI CCTNAGG 2 cut(s) 1903, 2808
BaeGI GKGCMC 1 cut(s) 1267
BalI TGGCCA 1 cut(s) 1661
BamHI GGATCC 2 cut(s) 1740, 1937
BanI GGYRCC 1 cut(s) 3644
BanII GRGCYC 4 cut(s) 958, 1281, 2354, 3605
BarI GAAGNNNNNNTAC 2 cut(s) 576, 608
BbsI GAAGAC 3 cut(s) 12, 532, 1672
Bbv12I GWGCWC 5 cut(s) 334, 958, 2354, 2521, 2887
BbvCI CCTCAGC 1 cut(s) 2511
BceAI ACGGC 3 cut(s) 2017, 3658, 4157
BciT130I CCWGG 2 cut(s) 2571, 3256
BciVI GTATCC 2 cut(s) 2697, 4136
BclI TGATCA 2 cut(s) 3192, 3357
BcnI CCSGG 1 cut(s) 553
BcoDI GTCTC 6 cut(s) 653, 800, 1066, 2083, 2145, 4074
BfaI CTAG 9 cut(s) 129, 161, 678, 794, 1455, 2307, 2901, 3390, 3945
BfmI CTRYAG 3 cut(s) 1053, 1282, 2237
BfoI RGCGCY 1 cut(s) 3648
BfuAI ACCTGC 1 cut(s) 1741
BfuI GTATCC 2 cut(s) 2697, 4136
BglII AGATCT 3 cut(s) 1696, 3394, 3583
BmcAI AGTACT 3 cut(s) 1259, 2274, 3200
Bme1390I CCNGG 3 cut(s) 553, 2571, 3256
Bme18I GGWCC 4 cut(s) 479, 944, 1145, 3164
BmeRI GACNNNNNGTC 1 cut(s) 851
BmeT110I CYCGRG 4 cut(s) 24, 1986, 3382, 3629
BmgT120I GGNCC 4 cut(s) 479, 944, 1145, 3164
BmrFI CCNGG 3 cut(s) 553, 2571, 3256
BmrI ACTGGG 2 cut(s) 1270, 3149
BmtI GCTAGC 1 cut(s) 2310
BmuI ACTGGG 2 cut(s) 1270, 3149
BpiI GAAGAC 3 cut(s) 12, 532, 1672
BplI GAGNNNNNCTC 4 cut(s) 7, 39, 1686, 1718
BpmI CTGGAG 3 cut(s) 2337, 3496, 4118
Bpu10I CCTNAGC 1 cut(s) 2511
BpuEI CTTGAG 5 cut(s) 218, 818, 1730, 2505, 4147
BpuMI CCSGG 1 cut(s) 553
Bsa29I ATCGAT 1 cut(s) 1541
BsaAI YACGTR 2 cut(s) 81, 89
BsaBI GATNNNNATC 2 cut(s) 1754, 2837
BsaHI GRCGYC 1 cut(s) 3645
BsaI GGTCTC 1 cut(s) 800
BsaJI CCNNGG 4 cut(s) 1179, 2118, 3381, 3900
BsaWI WCCGGW 2 cut(s) 2909, 3974
BsaXI ACNNNNNCTCC 4 cut(s) 2874, 2904, 3956, 3986
Bsc4I CCNNNNNNNGG 5 cut(s) 491, 1908, 2999, 3383, 3442
Bse118I RCCGGY 2 cut(s) 2909, 3658
Bse21I CCTNAGG 2 cut(s) 1903, 2808
Bse3DI GCAATG 6 cut(s) 202, 1635, 1946, 3360, 3924, 4193
Bse8I GATNNNNATC 2 cut(s) 1754, 2837
BseAI TCCGGA 1 cut(s) 3974
BseBI CCWGG 2 cut(s) 2571, 3256
BseCI ATCGAT 1 cut(s) 1541
BseDI CCNNGG 4 cut(s) 1179, 2118, 3381, 3900
BseJI GATNNNNATC 2 cut(s) 1754, 2837
BseLI CCNNNNNNNGG 5 cut(s) 491, 1908, 2999, 3383, 3442
BseMI GCAATG 6 cut(s) 202, 1635, 1946, 3360, 3924, 4193
BseRI GAGGAG 2 cut(s) 755, 2742
BseSI GKGCMC 1 cut(s) 1267
BsgI GTGCAG 3 cut(s) 1842, 3516, 3674
Bsh1236I CGCG 2 cut(s) 1152, 2427
BshFI GGCC 4 cut(s) 521, 1661, 2569, 3003
BshNI GGYRCC 1 cut(s) 3644
BshTI ACCGGT 1 cut(s) 2909
BshVI ATCGAT 1 cut(s) 1541
BsiHKAI GWGCWC 5 cut(s) 334, 958, 2354, 2521, 2887
BsiHKCI CYCGRG 4 cut(s) 24, 1986, 3382, 3629
BsiSI CCGG 6 cut(s) 522, 552, 2910, 3000, 3659, 3975
BslFI GGGAC 2 cut(s) 465, 858
BslI CCNNNNNNNGG 5 cut(s) 491, 1908, 2999, 3383, 3442
BsmAI GTCTC 6 cut(s) 653, 800, 1066, 2083, 2145, 4074
BsmBI CGTCTC 1 cut(s) 653
BsmFI GGGAC 2 cut(s) 465, 858
BsmI GAATGC 2 cut(s) 1316, 4232
BsnI GGCC 4 cut(s) 521, 1661, 2569, 3003
Bso31I GGTCTC 1 cut(s) 800
BsoBI CYCGRG 4 cut(s) 24, 1986, 3382, 3629
Bsp1286I GDGCHC 8 cut(s) 334, 958, 1267, 1281, 2354, 2521, 2887, 3605
Bsp13I TCCGGA 1 cut(s) 3974
Bsp1407I TGTACA 1 cut(s) 3318
Bsp19I CCATGG 2 cut(s) 1179, 3900
BspACI CCGC 5 cut(s) 134, 1616, 2186, 2427, 2450
BspANI GGCC 4 cut(s) 521, 1661, 2569, 3003
BspDI ATCGAT 1 cut(s) 1541
BspEI TCCGGA 1 cut(s) 3974
BspFNI CGCG 2 cut(s) 1152, 2427
BspMAI CTGCAG 2 cut(s) 1057, 2241
BspMI ACCTGC 1 cut(s) 1741
BspOI GCTAGC 1 cut(s) 2310
BspQI GCTCTTC 1 cut(s) 2359
BspT107I GGYRCC 1 cut(s) 3644
BspTNI GGTCTC 1 cut(s) 800
BsrBI CCGCTC 1 cut(s) 134
BsrDI GCAATG 6 cut(s) 202, 1635, 1946, 3360, 3924, 4193
BsrFI RCCGGY 2 cut(s) 2909, 3658
BsrGI TGTACA 1 cut(s) 3318
BssAI RCCGGY 2 cut(s) 2909, 3658
BssECI CCNNGG 4 cut(s) 1179, 2118, 3381, 3900
BssNI GRCGYC 1 cut(s) 3645
BssT1I CCWWGG 3 cut(s) 1179, 2118, 3900
Bst2UI CCWGG 2 cut(s) 2571, 3256
Bst6I CTCTTC 6 cut(s) 724, 1469, 1709, 2359, 2540, 3593
BstACI GRCGYC 1 cut(s) 3645
BstAUI TGTACA 1 cut(s) 3318
BstBAI YACGTR 2 cut(s) 81, 89
BstC8I GCNNGC 9 cut(s) 377, 1077, 1359, 1447, 1927, 2308, 2608, 2713, 3448
BstDSI CCRYGG 2 cut(s) 1179, 3900
BstENI CCTNNNNNAGG 1 cut(s) 1906
BstFNI CGCG 2 cut(s) 1152, 2427
BstH2I RGCGCY 1 cut(s) 3648
BstHHI GCGC 4 cut(s) 2427, 2931, 3283, 3647
BstMAI GTCTC 6 cut(s) 653, 800, 1066, 2083, 2145, 4074
BstMWI GCNNNNNNNGC 7 cut(s) 674, 1403, 2516, 2863, 2935, 3017, 3287
BstNI CCWGG 2 cut(s) 2571, 3256
BstNSI RCATGY 3 cut(s) 379, 712, 2096
BstSCI CCNGG 3 cut(s) 551, 2569, 3254
BstSFI CTRYAG 3 cut(s) 1053, 1282, 2237
BstSLI GKGCMC 1 cut(s) 1267
BstSNI TACGTA 1 cut(s) 89
BstUI CGCG 2 cut(s) 1152, 2427
BstV2I GAAGAC 3 cut(s) 12, 532, 1672
BstX2I RGATCY 7 cut(s) 1696, 1740, 1749, 1937, 2025, 3394, 3583
BstXI CCANNNNNNTGG 4 cut(s) 1783, 2007, 2623, 4011
BstYI RGATCY 7 cut(s) 1696, 1740, 1749, 1937, 2025, 3394, 3583
Bsu15I ATCGAT 1 cut(s) 1541
Bsu36I CCTNAGG 2 cut(s) 1903, 2808
BsuI GTATCC 2 cut(s) 2697, 4136
BsuRI GGCC 4 cut(s) 521, 1661, 2569, 3003
BsuTUI ATCGAT 1 cut(s) 1541
BtgI CCRYGG 2 cut(s) 1179, 3900
BtgZI GCGATG 1 cut(s) 3508
BtsI GCAGTG 1 cut(s) 332
BveI ACCTGC 1 cut(s) 1741
Cac8I GCNNGC 9 cut(s) 377, 1077, 1359, 1447, 1927, 2308, 2608, 2713, 3448
CfoI GCGC 4 cut(s) 2427, 2931, 3283, 3647
Cfr10I RCCGGY 2 cut(s) 2909, 3658
Cfr13I GGNCC 4 cut(s) 479, 944, 1145, 3164
ClaI ATCGAT 1 cut(s) 1541
CspAI ACCGGT 1 cut(s) 2909
DinI GGCGCC 1 cut(s) 3646
DraI TTTAAA 1 cut(s) 543
DriI GACNNNNNGTC 1 cut(s) 851
EaeI YGGCCR 2 cut(s) 519, 1659
Eam1104I CTCTTC 6 cut(s) 724, 1469, 1709, 2359, 2540, 3593
Eam1105I GACNNNNNGTC 1 cut(s) 851
EarI CTCTTC 6 cut(s) 724, 1469, 1709, 2359, 2540, 3593
Ecl136II GAGCTC 2 cut(s) 956, 2352
Eco105I TACGTA 1 cut(s) 89
Eco130I CCWWGG 3 cut(s) 1179, 2118, 3900
Eco24I GRGCYC 4 cut(s) 958, 1281, 2354, 3605
Eco31I GGTCTC 1 cut(s) 800
Eco32I GATATC 2 cut(s) 975, 2743
Eco47I GGWCC 4 cut(s) 479, 944, 1145, 3164
Eco53kI GAGCTC 2 cut(s) 956, 2352
Eco57I CTGAAG 3 cut(s) 800, 1055, 2156
Eco81I CCTNAGG 2 cut(s) 1903, 2808
Eco88I CYCGRG 4 cut(s) 24, 1986, 3382, 3629
EcoICRI GAGCTC 2 cut(s) 956, 2352
EcoNI CCTNNNNNAGG 1 cut(s) 1906
EcoO109I RGGNCCY 1 cut(s) 479
EcoRI GAATTC 2 cut(s) 1460, 3999
EcoRII CCWGG 2 cut(s) 2569, 3254
EcoRV GATATC 2 cut(s) 975, 2743
EcoT14I CCWWGG 3 cut(s) 1179, 2118, 3900
EcoT22I ATGCAT 1 cut(s) 3115
EcoT38I GRGCYC 4 cut(s) 958, 1281, 2354, 3605
EgeI GGCGCC 1 cut(s) 3646
EheI GGCGCC 1 cut(s) 3646
ErhI CCWWGG 3 cut(s) 1179, 2118, 3900
Esp3I CGTCTC 1 cut(s) 653
FalI AAGNNNNNCTT 4 cut(s) 451, 483, 4139, 4171
FaqI GGGAC 2 cut(s) 465, 858
FbaI TGATCA 2 cut(s) 3192, 3357
FriOI GRGCYC 4 cut(s) 958, 1281, 2354, 3605
FspBI CTAG 9 cut(s) 129, 161, 678, 794, 1455, 2307, 2901, 3390, 3945
FspI TGCGCA 1 cut(s) 3282
GlaI GCGC 4 cut(s) 2426, 2930, 3282, 3646
GsuI CTGGAG 3 cut(s) 2337, 3496, 4118
HaeII RGCGCY 1 cut(s) 3648
HaeIII GGCC 4 cut(s) 521, 1661, 2569, 3003
HapII CCGG 6 cut(s) 522, 552, 2910, 3000, 3659, 3975
HhaI GCGC 4 cut(s) 2427, 2931, 3283, 3647
Hin1I GRCGYC 1 cut(s) 3645
Hin6I GCGC 4 cut(s) 2425, 2929, 3281, 3645
HinP1I GCGC 4 cut(s) 2425, 2929, 3281, 3645
HincII GTYRAC 1 cut(s) 1423
HindII GTYRAC 1 cut(s) 1423
HindIII AAGCTT 1 cut(s) 2368
HpaI GTTAAC 1 cut(s) 1423
HpaII CCGG 6 cut(s) 522, 552, 2910, 3000, 3659, 3975
HphI GGTGA 7 cut(s) 128, 202, 1243, 1361, 1379, 3158, 3856
Hpy166II GTNNAC 7 cut(s) 86, 1148, 1423, 2654, 3055, 3319, 3374
Hpy8I GTNNAC 7 cut(s) 86, 1148, 1423, 2654, 3055, 3319, 3374
Hpy99I CGWCG 1 cut(s) 4178
HpyCH4IV ACGT 5 cut(s) 80, 88, 662, 1267, 3518
HpyF10VI GCNNNNNNNGC 7 cut(s) 674, 1403, 2516, 2863, 2935, 3017, 3287
HpySE526I ACGT 5 cut(s) 80, 88, 662, 1267, 3518
Hsp92I GRCGYC 1 cut(s) 3645
HspAI GCGC 4 cut(s) 2425, 2929, 3281, 3645
KasI GGCGCC 1 cut(s) 3644
Kpn2I TCCGGA 1 cut(s) 3974
Ksp22I TGATCA 2 cut(s) 3192, 3357
KspAI GTTAAC 1 cut(s) 1423
LguI GCTCTTC 1 cut(s) 2359
LmnI GCTCC 7 cut(s) 78, 2854, 2863, 2882, 3179, 3608, 4117
MaeI CTAG 9 cut(s) 129, 161, 678, 794, 1455, 2307, 2901, 3390, 3945
MaeII ACGT 5 cut(s) 80, 88, 662, 1267, 3518
MbiI CCGCTC 1 cut(s) 134
MfeI CAATTG 2 cut(s) 273, 2943
MflI RGATCY 7 cut(s) 1696, 1740, 1749, 1937, 2025, 3394, 3583
MhlI GDGCHC 8 cut(s) 334, 958, 1267, 1281, 2354, 2521, 2887, 3605
MlsI TGGCCA 1 cut(s) 1661
MluNI TGGCCA 1 cut(s) 1661
Mly113I GGCGCC 1 cut(s) 3645
MlyI GAGTC 2 cut(s) 2583, 4109
MmeI TCCRAC 7 cut(s) 159, 673, 922, 2514, 3243, 4016, 4165
Mox20I TGGCCA 1 cut(s) 1661
Mph1103I ATGCAT 1 cut(s) 3115
MroI TCCGGA 1 cut(s) 3974
MroXI GAANNNNTTC 2 cut(s) 3712, 3968
MscI TGGCCA 1 cut(s) 1661
MslI CAYNNNNRTG 3 cut(s) 1781, 2621, 3314
Msp20I TGGCCA 1 cut(s) 1661
MspA1I CMGCKG 1 cut(s) 3704
MspI CCGG 6 cut(s) 522, 552, 2910, 3000, 3659, 3975
MspR9I CCNGG 3 cut(s) 553, 2571, 3256
MunI CAATTG 2 cut(s) 273, 2943
Mva1269I GAATGC 2 cut(s) 1316, 4232
MvaI CCWGG 2 cut(s) 2571, 3256
MvnI CGCG 2 cut(s) 1152, 2427
MwoI GCNNNNNNNGC 7 cut(s) 674, 1403, 2516, 2863, 2935, 3017, 3287
NarI GGCGCC 1 cut(s) 3645
NciI CCSGG 1 cut(s) 553
NcoI CCATGG 2 cut(s) 1179, 3900
NheI GCTAGC 1 cut(s) 2306
NmuCI GTSAC 5 cut(s) 817, 919, 1231, 1385, 2905
NsbI TGCGCA 1 cut(s) 3282
NsiI ATGCAT 1 cut(s) 3115
NspI RCATGY 3 cut(s) 379, 712, 2096
OliI CACNNNNGTG 1 cut(s) 3314
PaeI GCATGC 1 cut(s) 379
PaeR7I CTCGAG 2 cut(s) 24, 1986
PciI ACATGT 2 cut(s) 708, 2092
PciSI GCTCTTC 1 cut(s) 2359
PcsI WCGNNNNNNNCGW 2 cut(s) 247, 4173
PctI GAATGC 2 cut(s) 1316, 4232
PdmI GAANNNNTTC 2 cut(s) 3712, 3968
PfeI GAWTC 9 cut(s) 838, 1175, 1185, 2114, 2771, 2816, 3553, 3789, 4109
PflMI CCANNNNNTGG 2 cut(s) 491, 3442
PfoI TCCNGGA 1 cut(s) 551
PinAI ACCGGT 1 cut(s) 2909
PleI GAGTC 2 cut(s) 2582, 4108
PluTI GGCGCC 1 cut(s) 3648
PpsI GAGTC 2 cut(s) 2582, 4108
Ppu21I YACGTR 2 cut(s) 81, 89
PpuMI RGGWCCY 1 cut(s) 479
PscI ACATGT 2 cut(s) 708, 2092
PshBI ATTAAT 1 cut(s) 3213
PsiI TTATAA 1 cut(s) 1955
Psp124BI GAGCTC 2 cut(s) 958, 2354
Psp1406I AACGTT 1 cut(s) 3518
Psp5II RGGWCCY 1 cut(s) 479
Psp6I CCWGG 2 cut(s) 2569, 3254
PspGI CCWGG 2 cut(s) 2569, 3254
PspPI GGNCC 4 cut(s) 479, 944, 1145, 3164
PspPPI RGGWCCY 1 cut(s) 479
PstI CTGCAG 2 cut(s) 1057, 2241
PsuI RGATCY 7 cut(s) 1696, 1740, 1749, 1937, 2025, 3394, 3583
PvuII CAGCTG 1 cut(s) 3704
RseI CAYNNNNRTG 3 cut(s) 1781, 2621, 3314
SacI GAGCTC 2 cut(s) 958, 2354
SapI GCTCTTC 1 cut(s) 2359
Sau96I GGNCC 4 cut(s) 479, 944, 1145, 3164
ScaI AGTACT 3 cut(s) 1259, 2274, 3200
SchI GAGTC 2 cut(s) 2583, 4109
ScrFI CCNGG 3 cut(s) 553, 2571, 3256
SduI GDGCHC 8 cut(s) 334, 958, 1267, 1281, 2354, 2521, 2887, 3605
SfcI CTRYAG 3 cut(s) 1053, 1282, 2237
SfoI GGCGCC 1 cut(s) 3646
Sfr274I CTCGAG 2 cut(s) 24, 1986
SinI GGWCC 4 cut(s) 479, 944, 1145, 3164
SlaI CTCGAG 2 cut(s) 24, 1986
SmiMI CAYNNNNRTG 3 cut(s) 1781, 2621, 3314
SmlI CTYRAG 7 cut(s) 24, 233, 833, 1745, 1986, 2520, 4126
SmoI CTYRAG 7 cut(s) 24, 233, 833, 1745, 1986, 2520, 4126
SnaBI TACGTA 1 cut(s) 89
SphI GCATGC 1 cut(s) 379
SsiI CCGC 5 cut(s) 134, 1616, 2186, 2427, 2450
SspDI GGCGCC 1 cut(s) 3644
SspMI CTAG 9 cut(s) 129, 161, 678, 794, 1455, 2307, 2901, 3390, 3945
SstI GAGCTC 2 cut(s) 958, 2354
StyD4I CCNGG 3 cut(s) 551, 2569, 3254
StyI CCWWGG 3 cut(s) 1179, 2118, 3900
TaiI ACGT 5 cut(s) 83, 91, 665, 1270, 3521
TatI WGTACW 7 cut(s) 1257, 1842, 2272, 3198, 3318, 3371, 3858
TauI GCSGC 1 cut(s) 2189
TfiI GAWTC 9 cut(s) 838, 1175, 1185, 2114, 2771, 2816, 3553, 3789, 4109
TseFI GTSAC 5 cut(s) 817, 919, 1231, 1385, 2905
Tsp45I GTSAC 5 cut(s) 817, 919, 1231, 1385, 2905
TspGWI ACGGA 1 cut(s) 256
Van91I CCANNNNNTGG 2 cut(s) 491, 3442
VpaK11BI GGWCC 4 cut(s) 479, 944, 1145, 3164
VspI ATTAAT 1 cut(s) 3213
XagI CCTNNNNNAGG 1 cut(s) 1906
XapI RAATTY 8 cut(s) 587, 1015, 1166, 1460, 1502, 2069, 2148, 3999
XbaI TCTAGA 2 cut(s) 1454, 3389
XceI RCATGY 3 cut(s) 379, 712, 2096
XcmI CCANNNNNNNNNTGG 3 cut(s) 1874, 2163, 2287
XhoI CTCGAG 2 cut(s) 24, 1986
XmnI GAANNNNTTC 2 cut(s) 3712, 3968
XspI CTAG 9 cut(s) 129, 161, 678, 794, 1455, 2307, 2901, 3390, 3945
ZrmI AGTACT 3 cut(s) 1259, 2274, 3200
Zsp2I ATGCAT 1 cut(s) 3115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.