Rh6BG403400
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
63023341 .. 63030473
7133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG403400.1

Sequence Viewer

Length: 4266 bp
ATGTGGAGAAACGAGGATACTTCAATGGAAGCTTTCTCCAAGTCTTCTCGTGAAGAAGACGATGAAGAATCTCTCAAATGGGCTGCTATTGAGAGATTGCCTACTTATTTACGCATAAGGAGAAGTATACTCGCTGATCAAGAGGAGGGTAAAGCCAGAGAAATTGATGTCAAGGATCTTGGATTACTAGAGAGGAAGAATTTGTTGGAGAGGTTAGTGAAGATTGCTGAGGAAGATAATGAGAAATTCTTGTTCAAGCTCAGGGACCGCATGAATAGAGTTGGACTTGAATTTCCAACAACTGAAGTGCGGTTCGAGCACTTAAATGTTGAAGCCGAAGCTTATGTAGGAAGCAGGGCATTACCTACAATGTTCAACTTCTCCATTAATATGTTAGAGGGGCTCTTGAATTGTGTTCATCTTCTTCCTAGTAGAAAGAAACCTTTGCCAATCCTACATGGTGTAAGTGGAATAATCAAGCCAAGAAGAATGACACTGCTTTTAGGCCCTCCAGGCTCCGGAAAAACCACATTGCTATTGGCATTGGCTGGAAAGCTTGGTAAAGATCTTAAAAGATCTGGAAGAGTTACCTACAATGGACTTGGGATGGATGAGTTTGTACCAGAGAGGACAGCAGCTTACATTAGTCAATATGATCTTCACATACCGGAGTTGACTGTGAGAGAAACTCTAGCTTTTTCAGCAAGATGTCAAGGGGTCGGACCACGTTATGAAATGTTAGTAGAACTACTAAGAAGAGAGAAGGCTGCAAATATTATGCCAGATTCTGATCTTGATGTCTACATGAAGGCAGCAGCACTAAAAGGACAGGAAACCACTGTGATTACAGATTATATACTCAAGGTTTTGGGACTTGAAGTTTGTGCAGACACCATGGTAGGGGATCAAATGAGACGAGGTATATCTGGTGGCCAAAGAAAGCGACTCACCACAGGGGAAATGCTTGTTGGGCCAGCAAGAGCACTTTTTATGGATGAGATATCAACCGGCCTGGACAGTTCAACAACATTTCAGATAGTAAATTCACTAAGACAATCCATTCACATTCTCAATGGAACTGCTGTAATCTCTCTCCTGCAGCCAGCACCAGAAACTTATGATCTCTTTGATGATATAATTCTCCTCTCAGATGGGCACATTGTGTATCAAGGTCCTCGCGAAAATGTGCTTGAGTTCTTTGAGTACATGGGCTTCCGATGTCCAGAGAGGAAAGGAGTCGCTGATTTCCTCCAAGAAGTGACATCATGGAAAGACCAAGAGCAATATTGGACCGATAAAGATAAGCCTTATAGCTTTGTCACGTCCAAGGAATTTTCTGAAGCATTGCAGTCATTTCACATTGGTCAAGAACTCGGTGATGAGCTTGCTAGACCTTTTGACAAGTCTAGAGGAAACCCTGCATCTTTAACAACTGAGAAGTACGGCGTTAGCAAGAAGGAACTTTTTAAAGCTTGTCTGTCTAGACATTATTTGCTCATGAAGAGGAACTCGTTTGTCTACATTACCAGAATGACAATGTTTCTCATAACTGCTTTTGTGACAATGACACTATTCCTACGGACTGAGATGCACCGGGATACAGTAGAAGATGGTGGCATTTATATGGGAGCTATGTTCTTCACAATGATGGTAATTATGTTCAATGGATACTCAGACCTTGCTATGACTCTCATGAAACTTCCTGTGTTTTACAAGCAAAGGGACCTGCTCTTCTATCCTGCTTGGGCATACTCTTTACCAACAGTGATTATAAGAATCCCCATGACCTTTGTGGAAGTTTCCATTTGGATGGCCATCACTTACTACGGTATTGGTTATGATCCAAGCATTGGAAGGTTCTGCAAGCAGTTCCTTGTACTAGTGTGCATTAGCCAGATGGCAAACGGACTGTTCCGATTGATAGGTGCATTAGGAAGGAACATGACTGTTGCAAACACATTTGGATCTGTTGCTTTACTATGCTGTTTTGTTCTGGGTGGCTTTATGTTATCACGAGAGGAGATGAAGAACTGGTTGTTGTGGGGATATTGGCTCTCACCGATGACGTATGGAACGAATGCAATGGCTGTCAATGAATTTTTTGGAAAAAGTTGGAGACATGTTCCACCCAACTCAGCAGAATCGTTAGGAGTTATGGTCTTGAAGTCTCGAGGGGTATTCCCAGATGCAAGTTGGTACTGGATTGGAGTAGTAGCTTTATTTGGATATTTTCTTCTGTTCAACTTTCTTTACACTTTGGCACTTCAGCTTCTGGAACCACTTGATAAGCCTCAGGCAGTATTGTCCAAAGAGGCTTTGGCAGTGAAACACGCCATGAAAACTGGAGAGACCATTCAGCTATCGCCAACAGGAAACAATTCTATTGGAGTAGGGAATGAAGTTCTGGAGAATGTGTCAGCCAATCGTCCCATGCAGCAAGGAATGATTCTTCCTTTTCAACCCCTCTCAATTACGTTTACTGAAATCAGATATGCAGTTGACATGCCACAGGAAATGAAAGGTCAAGGCATTACTGAGGATCGACTGGAACTGCTGAAGGGTGTGAGTGGTGCTTTCAGGCCTGGGGTCCTAACGGCTCTAATGGGTGTTAGCGGTGCTGGAAAGACTACTTTACTGGATGTCTTGGCAGGAAGGAAAACCGGTGGATATATTGAAGGAAACATTACCATTTCTGGGTATCCAAAAAAACAAGAAACATTTGCTCGTATCTCAGGATATTGTGAGCAGACAGATATACACTCTCCACATGTTACGGTTTATGAGTCTTTGATTTATTCTGCATGGCTCCGGTTGTCCCCTGAGGTTGATTCCCCAACCAGAAAGATGTTTATTGAAGAAGTCATGGAACTTGTGGAACTGACCTCAATAAGGGAAGCACTTCTTGGATTGCCTGGAGGGAATGGTCTCTCGACTGAGCAGCGCAAAAGGCTAACAATTGCAGTAGAGCTTGTTGCCAACCCATCCATAATATTTATGGATGAGCCCACCTCTGGCCTTGATGCCAGGGCAGCCGCAATTGTAATGAGAACAGTGAGGAATACAGTGGATACCGGAAGAACAGTAGTCTGCACCATCCACCAGCCAAGCATTGATATATTTGATGCTTTTGATGAGATGCTCCTTCTGAAATGGGGTGGCGAAGAAATATACGTTGGCCCTTTAGGCCATCATTCTTCCCACTTGATCAGATACTTTGAGGGAATTAGTGGAGTTTCTAAAATGAAGAATGGTTACAATCCTGCAACTTGGATGTTGGAAGTTACTTCTGCAGCTCAAGAAGCAGCTCTAGGGATAAATTTCACAGACATATACAAGAATTCGGAAGCATTCAGGAGAAACAAGGCCTTGGTCAAGGAACTAAGTATTCCTCCTCCGAATACAAGAGACTTGTACTTCCCAACAAAATATTCTCAGTCTTTCTATACCCAGTGCAAAGCTTGCGTATGGAAGCAACATTTGTCTTATTGGAGAAACCCGGCATACAGTGCAGTTAGACTTCTTTTCACGACATTGATAGCTTTAGCAACCGGGACATTATTCTGGGGTCTTGGCTCCAGAAGGCAAAAGCAGCAAGATCTTTTTAACGCAATGGGTGCTATGTATTCTGCTATTCTCTTCATTGGGCCACAAAATACCTCAACAGTGCAGCCAGTTGTAGGCATTGAGCGAATAGTCTTTTACAGAGAAAGGGCTGCCGGAATGTACTCTGCCTTGCCATATGCCTTTGGACAGGTTGGCATTGAGCTCCCATACACTTTGATCCAAACTATCATATATGTGGTTATATCATACACGATGATCGGATTTGAGTGGACGGTCAGCAAGTTCTTTTGGCAACTATTCTTCATATACTTCACTTACTTATACTTCACCTTATATGGCATGATGAGTGTGGCCATTACTCCCAACATTGCCGTTTCCGCTGTAGTTTCCACGGCATTCAACCCGCTGTGGAACGTTTTTTCAGGATTTATCATTCCCAAATCAAGAATTCCAATATGGTGGAGATGGTTCTACTGGTCGTGCCCGGTCTCTTGGAGCTTGTACGGAATGATTGGTTCGCAGTTTGGAGGCATTGAGGACAGGCTTGATTCCGGCGAAACTGTGGACGCTTTTACCAGGACTTATTTTGGGTATAGAGAAGACTTTATAAGTGTTGTTGCAATAGTGCTTGTAGCTTTTTCAGTGCTCTTTGGATCCGTCTTTGCCTTTTCAATCAAAGCCTTTAACTTTCAAAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1421

Amino Acids

160.57

Weight (kDa)

7.51

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 77 - 127 1.9e-07 ABC-transporter N-terminal
ABC_tran PF00005 152 - 333 3.5e-15 ABC transporter
ABC2_membrane PF01061 488 - 700 5.2e-49 ABC-2 type transporter
PDR_assoc PF08370 705 - 767 5.2e-26 Plant PDR ABC transporter associated
ABC_tran PF00005 852 - 1004 2e-20 ABC transporter
ABC2_membrane PF01061 1149 - 1363 1.1e-57 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1772, 4172
Acc36I ACCTGC 1 cut(s) 1734
AccB7I CCANNNNNTGG 1 cut(s) 1850
AccI GTMKAC 3 cut(s) 127, 801, 1518
AccII CGCG 1 cut(s) 1179
AccIII TCCGGA 1 cut(s) 518
AciI CCGC 6 cut(s) 268, 310, 2613, 3033, 3942, 3968
AclI AACGTT 1 cut(s) 3978
AclWI GGATC 8 cut(s) 183, 912, 1835, 1972, 2547, 3775, 4212, 4225
AcoI YGGCCR 3 cut(s) 931, 1812, 3915
AcsI RAATTY 9 cut(s) 199, 245, 290, 1042, 1331, 2096, 3316, 3337, 4011
AcuI CTGAAG 4 cut(s) 324, 1359, 2249, 2576
AdeI CACNNNGTG 1 cut(s) 1162
AfaI GTAC 8 cut(s) 621, 1205, 1442, 1878, 2198, 3413, 3725, 4067
AfiI CCNNNNNNNGG 7 cut(s) 518, 900, 1850, 2694, 2889, 3011, 3677
AflIII ACRYGT 2 cut(s) 2119, 2767
AgeI ACCGGT 1 cut(s) 2660
AhlI ACTAGT 1 cut(s) 1879
AjiI CACGTC 1 cut(s) 1323
AjnI CCWGG 6 cut(s) 511, 1011, 2581, 2911, 3023, 4139
Alw21I GWGCWC 4 cut(s) 321, 985, 3768, 4212
Alw26I GTCTC 7 cut(s) 907, 2110, 2172, 2342, 2930, 3399, 4057
AlwI GGATC 8 cut(s) 183, 912, 1835, 1972, 2547, 3775, 4212, 4225
AlwNI CAGNNNCTG 2 cut(s) 788, 2272
Ama87I CYCGRG 1 cut(s) 2169
Aor13HI TCCGGA 1 cut(s) 518
ApoI RAATTY 9 cut(s) 199, 245, 290, 1042, 1331, 2096, 3316, 3337, 4011
ArsI GACNNNNNNTTYG 2 cut(s) 864, 896
AseI ATTAAT 1 cut(s) 387
AsiGI ACCGGT 1 cut(s) 2660
Asp700I GAANNNNTTC 2 cut(s) 2377, 2898
AspLEI GCGC 1 cut(s) 2943
AsuC2I CCSGG 4 cut(s) 1595, 3497, 3550, 4049
AsuHPI GGTGA 4 cut(s) 940, 1388, 2049, 3883
AvaI CYCGRG 1 cut(s) 2169
AvaII GGWCC 6 cut(s) 265, 722, 1172, 1290, 1723, 2587
AxyI CCTNAGG 2 cut(s) 2292, 2820
BaeGI GKGCMC 2 cut(s) 1158, 4049
BalI TGGCCA 3 cut(s) 933, 1814, 3917
BamHI GGATCC 1 cut(s) 4217
BanII GRGCYC 3 cut(s) 405, 3006, 3768
BarI GAAGNNNNNNTAC 4 cut(s) 1196, 1228, 3236, 3268
BauI CACGAG 2 cut(s) 48, 2013
BbsI GAAGAC 3 cut(s) 36, 63, 4170
Bbv12I GWGCWC 4 cut(s) 321, 985, 3768, 4212
BbvCI CCTCAGC 1 cut(s) 228
BceAI ACGGC 4 cut(s) 1459, 2610, 3920, 3972
BciT130I CCWGG 6 cut(s) 513, 1013, 2583, 2913, 3025, 4141
BciVI GTATCC 5 cut(s) 10, 1591, 1661, 2709, 3061
BclI TGATCA 2 cut(s) 136, 3204
BcnI CCSGG 4 cut(s) 1595, 3497, 3550, 4049
BcoDI GTCTC 7 cut(s) 907, 2110, 2172, 2342, 2930, 3399, 4057
BcuI ACTAGT 1 cut(s) 1879
BfaI CTAG 8 cut(s) 188, 429, 692, 1389, 1407, 1482, 1880, 3308
BfmI CTRYAG 3 cut(s) 1097, 3288, 3945
BfuAI ACCTGC 1 cut(s) 1734
BfuI GTATCC 5 cut(s) 10, 1591, 1661, 2709, 3061
BglI GCCNNNNNGGC 2 cut(s) 513, 3183
BglII AGATCT 3 cut(s) 565, 575, 3595
Bme18I GGWCC 6 cut(s) 265, 722, 1172, 1290, 1723, 2587
BmeT110I CYCGRG 1 cut(s) 2169
BmgBI CACGTC 1 cut(s) 1323
BmiI GGNNCC 8 cut(s) 266, 517, 1724, 2277, 2588, 2807, 3574, 4219
BmrI ACTGGG 1 cut(s) 3442
BmsI GCATC 6 cut(s) 1430, 1578, 2176, 3010, 3112, 3126
BmuI ACTGGG 1 cut(s) 3442
BpiI GAAGAC 3 cut(s) 36, 63, 4170
BplI GAGNNNNNCTC 4 cut(s) 673, 705, 2993, 3025
BpmI CTGGAG 5 cut(s) 495, 2364, 2426, 2934, 3559
Bpu10I CCTNAGC 2 cut(s) 228, 260
BpuEI CTTGAG 3 cut(s) 845, 1211, 3279
BpuMI CCSGG 4 cut(s) 1595, 3497, 3550, 4049
BsaBI GATNNNNATC 2 cut(s) 789, 1814
BsaI GGTCTC 3 cut(s) 2342, 2930, 4057
BsaJI CCNNGG 6 cut(s) 894, 1326, 2582, 3024, 3366, 3954
BsaWI WCCGGW 5 cut(s) 518, 667, 2660, 2808, 3071
BsaXI ACNNNNNCTCC 4 cut(s) 2142, 2172, 2399, 2429
Bsc4I CCNNNNNNNGG 7 cut(s) 518, 900, 1850, 2694, 2889, 3011, 3677
Bse118I RCCGGY 2 cut(s) 1007, 2660
Bse1I ACTGG 8 cut(s) 2036, 2204, 2347, 2550, 2640, 3448, 3671, 4043
Bse21I CCTNAGG 2 cut(s) 2292, 2820
Bse3DI GCAATG 5 cut(s) 530, 1343, 2088, 3615, 3930
Bse8I GATNNNNATC 2 cut(s) 789, 1814
BseAI TCCGGA 1 cut(s) 518
BseBI CCWGG 6 cut(s) 513, 1013, 2583, 2913, 3025, 4141
BseDI CCNNGG 6 cut(s) 894, 1326, 2582, 3024, 3366, 3954
BseGI GGATG 9 cut(s) 612, 616, 1000, 1815, 2644, 2981, 3004, 3093, 3276
BseJI GATNNNNATC 2 cut(s) 789, 1814
BseLI CCNNNNNNNGG 7 cut(s) 518, 900, 1850, 2694, 2889, 3011, 3677
BseMI GCAATG 5 cut(s) 530, 1343, 2088, 3615, 3930
BseNI ACTGG 8 cut(s) 2036, 2204, 2347, 2550, 2640, 3448, 3671, 4043
BseRI GAGGAG 4 cut(s) 158, 1133, 2033, 3381
BseSI GKGCMC 2 cut(s) 1158, 4049
BsgI GTGCAG 4 cut(s) 906, 3073, 3528, 3686
Bsh1236I CGCG 1 cut(s) 1179
BshTI ACCGGT 1 cut(s) 2660
BsiHKAI GWGCWC 4 cut(s) 321, 985, 3768, 4212
BsiHKCI CYCGRG 1 cut(s) 2169
BslFI GGGAC 6 cut(s) 278, 885, 1736, 2412, 2800, 3565
BslI CCNNNNNNNGG 7 cut(s) 518, 900, 1850, 2694, 2889, 3011, 3677
BsmAI GTCTC 7 cut(s) 907, 2110, 2172, 2342, 2930, 3399, 4057
BsmBI CGTCTC 1 cut(s) 907
BsmFI GGGAC 6 cut(s) 278, 885, 1736, 2412, 2800, 3565
BsmI GAATGC 3 cut(s) 2083, 3347, 3959
Bso31I GGTCTC 3 cut(s) 2342, 2930, 4057
BsoBI CYCGRG 1 cut(s) 2169
Bsp1286I GDGCHC 8 cut(s) 321, 405, 985, 1158, 3006, 3768, 4049, 4212
Bsp13I TCCGGA 1 cut(s) 518
Bsp19I CCATGG 1 cut(s) 894
Bsp68I TCGCGA 1 cut(s) 1179
BspACI CCGC 6 cut(s) 268, 310, 2613, 3033, 3942, 3968
BspEI TCCGGA 1 cut(s) 518
BspFNI CGCG 1 cut(s) 1179
BspHI TCATGA 2 cut(s) 1497, 1692
BspLI GGNNCC 8 cut(s) 266, 517, 1724, 2277, 2588, 2807, 3574, 4219
BspMAI CTGCAG 2 cut(s) 1101, 3292
BspMI ACCTGC 1 cut(s) 1734
BspPI GGATC 8 cut(s) 183, 912, 1835, 1972, 2547, 3775, 4212, 4225
BspQI GCTCTTC 1 cut(s) 1736
BspTNI GGTCTC 3 cut(s) 2342, 2930, 4057
BsrDI GCAATG 5 cut(s) 530, 1343, 2088, 3615, 3930
BsrFI RCCGGY 2 cut(s) 1007, 2660
BsrI ACTGG 8 cut(s) 2036, 2204, 2347, 2550, 2640, 3448, 3671, 4043
BssAI RCCGGY 2 cut(s) 1007, 2660
BssECI CCNNGG 6 cut(s) 894, 1326, 2582, 3024, 3366, 3954
BssNAI GTATAC 1 cut(s) 128
BssSI CACGAG 2 cut(s) 48, 2013
BssT1I CCWWGG 3 cut(s) 894, 1326, 3366
Bst1107I GTATAC 1 cut(s) 128
Bst2BI CACGAG 2 cut(s) 48, 2013
Bst2UI CCWGG 6 cut(s) 513, 1013, 2583, 2913, 3025, 4141
Bst6I CTCTTC 5 cut(s) 577, 751, 1496, 1736, 3641
BstAPI GCANNNNNTGC 3 cut(s) 3459, 3506, 3614
BstC8I GCNNGC 5 cut(s) 975, 1104, 1386, 1865, 3460
BstDSI CCRYGG 2 cut(s) 894, 3954
BstENI CCTNNNNNAGG 1 cut(s) 2887
BstF5I GGATG 9 cut(s) 612, 616, 1000, 1815, 2644, 2981, 3004, 3093, 3276
BstFNI CGCG 1 cut(s) 1179
BstHHI GCGC 1 cut(s) 2943
BstMAI GTCTC 7 cut(s) 907, 2110, 2172, 2342, 2930, 3399, 4057
BstNI CCWGG 6 cut(s) 513, 1013, 2583, 2913, 3025, 4141
BstNSI RCATGY 3 cut(s) 2123, 2506, 2771
BstSFI CTRYAG 3 cut(s) 1097, 3288, 3945
BstSLI GKGCMC 2 cut(s) 1158, 4049
BstUI CGCG 1 cut(s) 1179
BstV2I GAAGAC 3 cut(s) 36, 63, 4170
BstX2I RGATCY 6 cut(s) 175, 565, 575, 1964, 3595, 4217
BstXI CCANNNNNNTGG 2 cut(s) 1810, 4023
BstYI RGATCY 6 cut(s) 175, 565, 575, 1964, 3595, 4217
BstZ17I GTATAC 1 cut(s) 128
Bsu36I CCTNAGG 2 cut(s) 2292, 2820
BsuI GTATCC 5 cut(s) 10, 1591, 1661, 2709, 3061
BtgI CCRYGG 2 cut(s) 894, 3954
BtrI CACGTC 1 cut(s) 1323
BtsCI GGATG 9 cut(s) 612, 616, 1000, 1815, 2644, 2981, 3004, 3093, 3276
BtsI GCAGTG 2 cut(s) 494, 2328
BtuMI TCGCGA 1 cut(s) 1179
BveI ACCTGC 1 cut(s) 1734
Cac8I GCNNGC 5 cut(s) 975, 1104, 1386, 1865, 3460
CaiI CAGNNNCTG 2 cut(s) 788, 2272
CciI TCATGA 2 cut(s) 1497, 1692
CfoI GCGC 1 cut(s) 2943
Cfr10I RCCGGY 2 cut(s) 1007, 2660
CseI GACGC 1 cut(s) 4139
Csp6I GTAC 8 cut(s) 620, 1204, 1441, 1877, 2197, 3412, 3724, 4066
CspAI ACCGGT 1 cut(s) 2660
CviQI GTAC 8 cut(s) 620, 1204, 1441, 1877, 2197, 3412, 3724, 4066
DraI TTTAAA 1 cut(s) 1468
DraIII CACNNNGTG 1 cut(s) 1162
EaeI YGGCCR 3 cut(s) 931, 1812, 3915
Eam1104I CTCTTC 5 cut(s) 577, 751, 1496, 1736, 3641
EarI CTCTTC 5 cut(s) 577, 751, 1496, 1736, 3641
Ecl136II GAGCTC 1 cut(s) 3766
Eco130I CCWWGG 3 cut(s) 894, 1326, 3366
Eco147I AGGCCT 2 cut(s) 2581, 3365
Eco24I GRGCYC 3 cut(s) 405, 3006, 3768
Eco31I GGTCTC 3 cut(s) 2342, 2930, 4057
Eco32I GATATC 1 cut(s) 1002
Eco47I GGWCC 6 cut(s) 265, 722, 1172, 1290, 1723, 2587
Eco53kI GAGCTC 1 cut(s) 3766
Eco57I CTGAAG 4 cut(s) 324, 1359, 2249, 2576
Eco81I CCTNAGG 2 cut(s) 2292, 2820
Eco88I CYCGRG 1 cut(s) 2169
EcoICRI GAGCTC 1 cut(s) 3766
EcoNI CCTNNNNNAGG 1 cut(s) 2887
EcoO109I RGGNCCY 4 cut(s) 506, 1172, 1723, 2587
EcoRI GAATTC 2 cut(s) 3337, 4011
EcoRII CCWGG 6 cut(s) 511, 1011, 2581, 2911, 3023, 4139
EcoRV GATATC 1 cut(s) 1002
EcoT14I CCWWGG 3 cut(s) 894, 1326, 3366
EcoT38I GRGCYC 3 cut(s) 405, 3006, 3768
ErhI CCWWGG 3 cut(s) 894, 1326, 3366
Esp3I CGTCTC 1 cut(s) 907
FalI AAGNNNNNCTT 2 cut(s) 2886, 2918
FaqI GGGAC 6 cut(s) 278, 885, 1736, 2412, 2800, 3565
FauI CCCGC 1 cut(s) 3975
FauNDI CATATG 1 cut(s) 3739
FbaI TGATCA 2 cut(s) 136, 3204
FblI GTMKAC 3 cut(s) 127, 801, 1518
FokI GGATG 9 cut(s) 619, 623, 1007, 1822, 2651, 2968, 3011, 3080, 3283
FriOI GRGCYC 3 cut(s) 405, 3006, 3768
FspBI CTAG 8 cut(s) 188, 429, 692, 1389, 1407, 1482, 1880, 3308
GlaI GCGC 1 cut(s) 2942
GsuI CTGGAG 5 cut(s) 495, 2364, 2426, 2934, 3559
HgaI GACGC 1 cut(s) 4139
HhaI GCGC 1 cut(s) 2943
Hin6I GCGC 1 cut(s) 2941
HinP1I GCGC 1 cut(s) 2941
HincII GTYRAC 2 cut(s) 675, 2500
HindII GTYRAC 2 cut(s) 675, 2500
HindIII AAGCTT 5 cut(s) 30, 339, 554, 1470, 3456
HphI GGTGA 4 cut(s) 940, 1388, 2049, 3883
Hpy166II GTNNAC 8 cut(s) 128, 675, 802, 1519, 2478, 2500, 3834, 4129
Hpy8I GTNNAC 8 cut(s) 128, 675, 802, 1519, 2478, 2500, 3834, 4129
HpyCH4IV ACGT 6 cut(s) 727, 1322, 2066, 2474, 3171, 3978
HpySE526I ACGT 6 cut(s) 727, 1322, 2066, 2474, 3171, 3978
HspAI GCGC 1 cut(s) 2941
Kpn2I TCCGGA 1 cut(s) 518
Ksp22I TGATCA 2 cut(s) 136, 3204
LguI GCTCTTC 1 cut(s) 1736
LmnI GCTCC 7 cut(s) 521, 1628, 2811, 3144, 3578, 3771, 4059
LweI GCATC 6 cut(s) 1430, 1578, 2176, 3010, 3112, 3126
MaeI CTAG 8 cut(s) 188, 429, 692, 1389, 1407, 1482, 1880, 3308
MaeII ACGT 6 cut(s) 727, 1322, 2066, 2474, 3171, 3978
MaeIII GTNAC 7 cut(s) 586, 1258, 1318, 1558, 2770, 3251, 3280
MfeI CAATTG 2 cut(s) 2955, 3036
MflI RGATCY 6 cut(s) 175, 565, 575, 1964, 3595, 4217
MhlI GDGCHC 8 cut(s) 321, 405, 985, 1158, 3006, 3768, 4049, 4212
MlsI TGGCCA 3 cut(s) 933, 1814, 3917
MluNI TGGCCA 3 cut(s) 933, 1814, 3917
MlyI GAGTC 4 cut(s) 939, 1245, 1681, 2792
MmeI TCCRAC 6 cut(s) 186, 262, 320, 700, 2093, 3255
Mox20I TGGCCA 3 cut(s) 933, 1814, 3917
MroI TCCGGA 1 cut(s) 518
MroXI GAANNNNTTC 2 cut(s) 2377, 2898
MscI TGGCCA 3 cut(s) 933, 1814, 3917
MseI TTAA 7 cut(s) 323, 387, 570, 1427, 1467, 3603, 4248
MslI CAYNNNNRTG 6 cut(s) 324, 389, 1622, 1646, 1808, 3797
Msp20I TGGCCA 3 cut(s) 933, 1814, 3917
MspA1I CMGCKG 2 cut(s) 3944, 3970
MunI CAATTG 2 cut(s) 2955, 3036
Mva1269I GAATGC 3 cut(s) 2083, 3347, 3959
MvaI CCWGG 6 cut(s) 513, 1013, 2583, 2913, 3025, 4141
MvnI CGCG 1 cut(s) 1179
NciI CCSGG 4 cut(s) 1595, 3497, 3550, 4049
NcoI CCATGG 1 cut(s) 894
NdeI CATATG 1 cut(s) 3739
NlaIV GGNNCC 8 cut(s) 266, 517, 1724, 2277, 2588, 2807, 3574, 4219
NmuCI GTSAC 3 cut(s) 1258, 1318, 1558
NruI TCGCGA 1 cut(s) 1179
NspI RCATGY 3 cut(s) 2123, 2506, 2771
PaeR7I CTCGAG 1 cut(s) 2169
PagI TCATGA 2 cut(s) 1497, 1692
PceI AGGCCT 2 cut(s) 2581, 3365
PciI ACATGT 2 cut(s) 2119, 2767
PciSI GCTCTTC 1 cut(s) 1736
PcsI WCGNNNNNNNCGW 1 cut(s) 2072
PctI GAATGC 3 cut(s) 2083, 3347, 3959
PdmI GAANNNNTTC 2 cut(s) 2377, 2898
PfeI GAWTC 7 cut(s) 68, 785, 1776, 2141, 2446, 2828, 4112
PflMI CCANNNNNTGG 1 cut(s) 1850
PinAI ACCGGT 1 cut(s) 2660
PleI GAGTC 4 cut(s) 939, 1244, 1681, 2791
PpsI GAGTC 4 cut(s) 939, 1244, 1681, 2791
PpuMI RGGWCCY 3 cut(s) 1172, 1723, 2587
PscI ACATGT 2 cut(s) 2119, 2767
PshBI ATTAAT 1 cut(s) 387
PsiI TTATAA 2 cut(s) 1772, 4172
Psp124BI GAGCTC 1 cut(s) 3768
Psp1406I AACGTT 1 cut(s) 3978
Psp5II RGGWCCY 3 cut(s) 1172, 1723, 2587
Psp6I CCWGG 6 cut(s) 511, 1011, 2581, 2911, 3023, 4139
PspGI CCWGG 6 cut(s) 511, 1011, 2581, 2911, 3023, 4139
PspN4I GGNNCC 8 cut(s) 266, 517, 1724, 2277, 2588, 2807, 3574, 4219
PspPPI RGGWCCY 3 cut(s) 1172, 1723, 2587
PstI CTGCAG 2 cut(s) 1101, 3292
PstNI CAGNNNCTG 2 cut(s) 788, 2272
PsuI RGATCY 6 cut(s) 175, 565, 575, 1964, 3595, 4217
RruI TCGCGA 1 cut(s) 1179
RsaI GTAC 8 cut(s) 621, 1205, 1442, 1878, 2198, 3413, 3725, 4067
RsaNI GTAC 8 cut(s) 620, 1204, 1441, 1877, 2197, 3412, 3724, 4066
RseI CAYNNNNRTG 6 cut(s) 324, 389, 1622, 1646, 1808, 3797
SacI GAGCTC 1 cut(s) 3768
SapI GCTCTTC 1 cut(s) 1736
SaqAI TTAA 7 cut(s) 323, 387, 570, 1427, 1467, 3603, 4248
SchI GAGTC 4 cut(s) 939, 1245, 1681, 2792
SduI GDGCHC 8 cut(s) 321, 405, 985, 1158, 3006, 3768, 4049, 4212
SfaNI GCATC 6 cut(s) 1430, 1578, 2176, 3010, 3112, 3126
SfcI CTRYAG 3 cut(s) 1097, 3288, 3945
SfiI GGCCNNNNNGGCC 1 cut(s) 3183
Sfr274I CTCGAG 1 cut(s) 2169
SinI GGWCC 6 cut(s) 265, 722, 1172, 1290, 1723, 2587
SlaI CTCGAG 1 cut(s) 2169
SmiMI CAYNNNNRTG 6 cut(s) 324, 389, 1622, 1646, 1808, 3797
SmlI CTYRAG 4 cut(s) 860, 1190, 2169, 3294
SmoI CTYRAG 4 cut(s) 860, 1190, 2169, 3294
SpeI ACTAGT 1 cut(s) 1879
SseBI AGGCCT 2 cut(s) 2581, 3365
SsiI CCGC 6 cut(s) 268, 310, 2613, 3033, 3942, 3968
SspI AATATT 4 cut(s) 775, 1286, 2991, 3428
SspMI CTAG 8 cut(s) 188, 429, 692, 1389, 1407, 1482, 1880, 3308
SstI GAGCTC 1 cut(s) 3768
StuI AGGCCT 2 cut(s) 2581, 3365
StyI CCWWGG 3 cut(s) 894, 1326, 3366
TaiI ACGT 6 cut(s) 730, 1325, 2069, 2477, 3174, 3981
TaqI TCGA 4 cut(s) 315, 2170, 2542, 2930
TaqII GACCGA 1 cut(s) 1307
TatI WGTACW 4 cut(s) 1203, 1876, 3411, 3723
TauI GCSGC 1 cut(s) 3035
TfiI GAWTC 7 cut(s) 68, 785, 1776, 2141, 2446, 2828, 4112
Tru1I TTAA 7 cut(s) 323, 387, 570, 1427, 1467, 3603, 4248
Tru9I TTAA 7 cut(s) 323, 387, 570, 1427, 1467, 3603, 4248
TseFI GTSAC 3 cut(s) 1258, 1318, 1558
Tsp45I GTSAC 3 cut(s) 1258, 1318, 1558
TspGWI ACGGA 4 cut(s) 1594, 1920, 4083, 4210
Van91I CCANNNNNTGG 1 cut(s) 1850
VpaK11BI GGWCC 6 cut(s) 265, 722, 1172, 1290, 1723, 2587
VspI ATTAAT 1 cut(s) 387
XagI CCTNNNNNAGG 1 cut(s) 2887
XapI RAATTY 9 cut(s) 199, 245, 290, 1042, 1331, 2096, 3316, 3337, 4011
XbaI TCTAGA 2 cut(s) 1406, 1481
XceI RCATGY 3 cut(s) 2123, 2506, 2771
XcmI CCANNNNNNNNNTGG 5 cut(s) 535, 1789, 2190, 2314, 2992
XhoI CTCGAG 1 cut(s) 2169
XmiI GTMKAC 3 cut(s) 127, 801, 1518
XmnI GAANNNNTTC 2 cut(s) 2377, 2898
XspI CTAG 8 cut(s) 188, 429, 692, 1389, 1407, 1482, 1880, 3308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.