RH7BG195100
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0000493
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG195100.1

Sequence Viewer

Length: 4071 bp
ATGAGCGTCATGATCAGCCAAGAACAAGAAGAAGAGCCAATCTCCGAGCCTCCTTCCGGTGATAAGGAGTCGAGTCAGACAATGACGACATGGGGTGCCATTGAGAGACTGCCTACGTATTCACGCACAAGGAGAGGCATTCTACTCGGTCAAGGTCAAGAGGAGGACGGTGAAAGCAGAGAGATTGATATAAAGAAGAATCTTGGACTACCAGAGAGGAAGACTTTGTTGGAGAGGCTAGTGAAGATTGTTGAGCAAGATAATGACAAGTTCTTGCTCAAGATCAAGGACCGCATGAAAAGAGTTGGACTTGAATTTCCAACAACTGAAGTGCGGTTCGAGAATTTAAATGTTGAAGCAGAAGCTTATGTAGGAAGCAGGGCATCATCTACAATGTTCAACTTCTCCATTAATATGTTAGAGGGGTTCCTGAATTATTTTCACATTCTTCCAAGTAGAAAGAGACCATTTACAATCCTCCATGATGTAAGTGGGATTATCAAGCCAAGAAGAATGACACTTCTTTTAGGGCCCCCTGGCTCTGGAAAGACGACGTTACTATTGGCCTTGGCTGGAAAACTCGGTAAAGCTAATCTAAAATTTTCAGGGAGAGTTACATACAATGGAATTGAGATGGATGAGTTTGTATCAGAGAGGACATCAGCTTATGTTAGTCAACATGATCTCCACATACCAGAATTGACAGTGAGAGAAACACTGGCTTTTGCAGCTAGATGTCAAGGTGTTGGACCACGTTATGAAATGTTGGTGGAATTATTAAGGAGAGAAAAGGTTGCAAATATTATGCCAGATCTTGATCTTGATCTCTACATGAAGGCAGCAGCACTAGAAGGACAGGAAACTAATATTGTTACAGACTTTATTCTCAAGGTTTTGGGACTCGAAGATTGTGCTGACATTATGGTAGGAGATGAAATGACCAGAGGTATCTCTGGTGGACAAAAAAAGCGACTCACCACAGGGGAGATGCTGGTTGGACCAGAAAGAGTACTTCTTATGGATGAGATATCAAACGGGCTGGACAGTTCAACAACATTGCAAATAGTGAAATCACTACAACAATACGTCCACATCCTCAACGGAACTGCATTAATCGCTCTACTGCAGCCAGCACCAGAGACTTATGATCTCTTCGATGATATAATTCTCCTTTCGGATGGCTACGTTGTGTATCAAGGTCCCCGTGAGAATGTTCTTGAGTTCTTTGAGTACATGGGCTTCAAATGTCCAGAGAGGAAAGGAGTTGCTGATTTCCTACAAGAGGTGACATCAAGAAAAGATCAAGAGCAATACTGGGCTCAGATGGATAGGCCTTATAGCTTTGTAACAACCAAAGAATTTTCTGAAGCAATGCAGTTATTTCACATTGGTAGAAAACTTGGTGATGAGCTTTCTATTCCATTTAACAAGTCAGAAGGCTGCCGTGCTGCTTTGTCAACTAAAAAATATGGTGTTAGTAAGAAGGAAATGTTCAAAGCTTGTATGGCCAGACAAATTTTGCTTACAAAGAGGAATTCATTTGTCTACATTTTCAAATTGGTGCAGCTTATTCTAGTTGCTGTTACAACAATGACACTATTTTTTCGTACTGAGATGGAGCGAAACACAGTAGCCGATGGTAGGATTTATATGGGAGCTTTATTCTATACGCTACTTGCAATTATGCTTAATGGGTTTGCAGAGCTTCATATGACAGTCACTAGACTGCCTGTGTTTTTCAAGCAAAGGGACCATCTGTTCTATCCTGCTTGGGCATACTCTTTACCCCCATGGCTGATAAGGATCCCTATAACTTTTGTGGACGTTTTCATCTGGGTGATCATTACTTACTACAGTGTAGGTTATGATCCGAGCATTGAAAGATTTGTCAAACAATTCCTTCTACTGCTGTGTATTAGCCAGATGGCAAATGGACTGTTTCGATTGATAGGGGCACTAGGAAGGAACATAACTATTGCAAATACATTTGGATTCGGTACTTTACTTGTCATTCTTGGTCTGTGTGGCTTTATCATATCAAAAGAGGATTTGAAGAAATGGTTGTTGTGGGGATATTGGATCTCACCAATCACGTATGGACTGAATGCCATCGCTGTTAATGAATTTCTTGGAAAAAGTTGGAGACATGTTCCTGCCAACTCAACAGAAGCATTAGGAGTTATGGTCTTGAAGTATCAAGGCATATCCCCAGAGGCACGCTTCTACTGGATTGGATTAGTAGCTTTGATTGGATTTATTCTTCTGTTGAATTTCCTTTTCACCTTGGCACTTCAGTATCTTGATCCACTTGAGATGCCCCATGCAGTACTATACAATGAGGCATCCTCTACAACAGAGGATAGCAAAGTTGCAAGCAATCCTACTATGCAGCATGGCATGGTTCTTCCATTTGAACCCCTTTCAATTACTTTCGAGGAAATCAGATATGCTGTCGATATGCCTGAGGAAATGAAAGATCAAAGCAAAACTCGGGATCGGCTAGAACTTTTGAAGGGTGTGAGTGGTGCTTTTAGGCCTGGAGTTCTAACAGCTTTGATGGGTGTTAGTGGTGCTGGAAAAACCACTCTCATGGATGTCTTGGCAGGAAGGAAGACAAGTGGGTATATTGAGGGGAGGATCACCTTATCTGGATATGCAAAAAGGCAAGAAACATTTGCTCGCATATCAGGATACTGTGAGCAAACAGATATACACTCCCCTCATGTCACAGTTTACGAGTCTTTGGTTTACTCTGCATGGCTCCGGTTGCCCCGGGAGGTTGATTCCCCAACCAGAAAGATGTTTATTGAGGAGGTTATGGAGCTTGTAGAAATGACCTCAATAAGTGACAGACTTGTTGGATTGCCAGGAGTGAATGGTCTCTCAACTGAACAACGCAAAAGGCTAACAATTGCAGTAGAGCTTGTTGCCAACCCCTCGATAATATTTATGGATGAGCCGACTTCTGGCCTTGATGCTAGGGCAGCAGCAATTGTAATGAGAACGGTGAGGAATACAGTGGACACTGGGAGAACTGTAGTCTGTACCATCCACCAACCAAGCATTGATATATTTGATGCTTTTGATGAGATGTTGCTTCTGAAACAGGGAGGCGAAGAAATATATGTTGGCCCTTTAGGCCACCATTCTTCCCAGATGATTGAATACTTTGAGGAGATTAGTGGAGTTTCTAAAATCAAGGATGGTTACAATCCAGCAACCTGGATGTTGGAGGTTACTTCTCCAGCACAAGAAGCATCTCTTGGGGTTGATTTTGCCAACATATACAAGAATTCAGAAATATATAGGACAAATAAGGCATTGATAAAGGAACTAAGTACTCCTGCACCAAATTCAAAGGACTTGTACTTCCCAACACAATATTCGCAGTCTTTCTTTACCCAGTGTCTAGCTTGCCTATGGAAACAGAGTGTATCATATTGGCGAAACCCTCAATACACTGTAGTGAGACTTCTTTTCACAGCTATGATGGCCGGACTACTTGGGTCATTTTTCTGGGATCTTGGCTCCAAAAGACAAAAGCAAAGAGATCTCTTTTCTGCGATGGGTTCTATGTATGCTGCTGTGCTCTTTCTTGGTATACAAAATTCCTTGTCAGTGCAGCCAATCGTAGGTGTTGAGAGGTTGGTCTCTTACAGAGAAACGGCTGCTGGAATGTACTCAGCTTTTCCATTTGCCTTTGGACAGGCTATCATTGAGATCCCGTACACTTTGATCCAGACTATTATATATGGGGTTATAGTATACTCCATGATCGGATTTGATTGGACAGTCAGCAAGTTCTTTTGTTATCTCTTGTTCATGTACCTCACCTTCTTATACTTCACCTTCCATGGCATGATGATTGTGGCCATTACTCCCAACAACACCATCTCGATCTGCTGTAGTTTCGTCTGCCTTCTATCCATTATGGAATGTTATTTCAGGATATCTCATTCCCAAAACAAGAATTCCAATATGGTGGAGATGGTTCTATTGGGTCAGCCCGACCTCTTGGAGCTTGTATGGATTGTTTTCTTCACAGTTTGGAGGTCTCAAGGACACACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1356

Amino Acids

153.46

Weight (kDa)

6.02

Isoelectric Point (pI)

40.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 85 - 135 3.1e-06 ABC-transporter N-terminal
ABC_tran PF00005 160 - 343 7.9e-18 ABC transporter
ABC2_membrane PF01061 498 - 709 4e-47 ABC-2 type transporter
PDR_assoc PF08370 714 - 776 1.3e-21 Plant PDR ABC transporter associated
ABC_tran PF00005 837 - 989 6.1e-21 ABC transporter
ABC2_membrane PF01061 1134 - 1310 2.2e-39 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 95
AccI GTMKAC 3 cut(s) 1545, 3601, 3765
AciI CCGC 2 cut(s) 292, 334
AcoI YGGCCR 3 cut(s) 1506, 3492, 3870
AcuI CTGAAG 3 cut(s) 348, 1386, 2276
AfiI CCNNNNNNNGG 6 cut(s) 56, 542, 1282, 1641, 2966, 3632
AflIII ACRYGT 1 cut(s) 2146
AjnI CCWGG 4 cut(s) 535, 2536, 2866, 3221
AjuI GAANNNNNNNTTGG 8 cut(s) 212, 244, 3111, 3143, 3246, 3278, 3367, 3399
AleI CACNNNNGTG 1 cut(s) 3464
AloI GAACNNNNNNTCC 2 cut(s) 1742, 1774
Alw21I GWGCWC 1 cut(s) 3591
Alw26I GTCTC 8 cut(s) 100, 457, 1133, 2137, 2885, 3463, 3655, 4059
Ama87I CYCGRG 2 cut(s) 2490, 2772
ApaI GGGCCC 1 cut(s) 534
AseI ATTAAT 2 cut(s) 411, 1112
AspS9I GGNCC 8 cut(s) 289, 530, 531, 749, 998, 1199, 1750, 3131
AsuC2I CCSGG 2 cut(s) 2773, 2774
AvaI CYCGRG 2 cut(s) 2490, 2772
AvaII GGWCC 5 cut(s) 289, 749, 998, 1199, 1750
AxyI CCTNAGG 1 cut(s) 2463
BaeGI GKGCMC 2 cut(s) 534, 1957
BaeI ACNNNNGTAYC 2 cut(s) 2279, 2312
BalI TGGCCA 2 cut(s) 1508, 3872
BamHI GGATCC 1 cut(s) 1803
BanI GGYRCC 1 cut(s) 95
BanII GRGCYC 2 cut(s) 534, 1321
BarI GAAGNNNNNNTAC 6 cut(s) 1223, 1255, 3456, 3488, 3818, 3850
BbsI GAAGAC 2 cut(s) 227, 2618
Bbv12I GWGCWC 1 cut(s) 3591
BceAI ACGGC 2 cut(s) 1428, 3681
BcgI CGANNNNNNTGC 4 cut(s) 127, 161, 893, 927
BciT130I CCWGG 4 cut(s) 537, 2538, 2868, 3223
BciVI GTATCC 1 cut(s) 2684
BclI TGATCA 2 cut(s) 12, 1839
BcnI CCSGG 2 cut(s) 2773, 2774
BcoDI GTCTC 8 cut(s) 100, 457, 1133, 2137, 2885, 3463, 3655, 4059
BfaI CTAG 9 cut(s) 239, 732, 848, 1574, 1722, 1958, 2501, 2979, 3410
BfmI CTRYAG 5 cut(s) 1124, 1852, 3036, 3462, 3904
BfuI GTATCC 1 cut(s) 2684
BglI GCCNNNNNGGC 1 cut(s) 3138
BglII AGATCT 2 cut(s) 811, 3550
BmcAI AGTACT 3 cut(s) 1011, 2328, 3340
Bme1390I CCNGG 6 cut(s) 537, 2538, 2773, 2774, 2868, 3223
Bme18I GGWCC 5 cut(s) 289, 749, 998, 1199, 1750
BmeT110I CYCGRG 2 cut(s) 2490, 2772
BmgT120I GGNCC 8 cut(s) 289, 530, 531, 749, 998, 1199, 1750, 3131
BmiI GGNNCC 9 cut(s) 97, 428, 532, 533, 1201, 1751, 1805, 2762, 3529
BmrFI CCNGG 6 cut(s) 537, 2538, 2773, 2774, 2868, 3223
BmrI ACTGGG 3 cut(s) 1324, 3036, 3397
BmsI GCATC 7 cut(s) 392, 978, 2304, 2351, 2965, 3067, 3266
BmuI ACTGGG 3 cut(s) 1324, 3036, 3397
BpiI GAAGAC 2 cut(s) 227, 2618
BplI GAGNNNNNCTC 4 cut(s) 26, 58, 2330, 2362
BpmI CTGGAG 2 cut(s) 2559, 3228
BpuEI CTTGAG 5 cut(s) 263, 872, 1238, 2330, 4041
BpuMI CCSGG 2 cut(s) 2773, 2774
BsaAI YACGTR 2 cut(s) 117, 2094
BsaBI GATNNNNATC 3 cut(s) 816, 822, 1802
BsaI GGTCTC 4 cut(s) 457, 2885, 3655, 4059
BsaJI CCNNGG 7 cut(s) 535, 567, 1790, 2283, 2771, 2772, 3853
BsaWI WCCGGW 2 cut(s) 56, 2763
BsaXI ACNNNNNCTCC 4 cut(s) 669, 699, 2169, 2199
Bsc4I CCNNNNNNNGG 6 cut(s) 56, 542, 1282, 1641, 2966, 3632
Bse1I ACTGG 5 cut(s) 723, 1319, 2231, 3031, 3403
Bse21I CCTNAGG 1 cut(s) 2463
Bse3DI GCAATG 2 cut(s) 1055, 1377
Bse8I GATNNNNATC 3 cut(s) 816, 822, 1802
BseBI CCWGG 4 cut(s) 537, 2538, 2868, 3223
BseDI CCNNGG 7 cut(s) 535, 567, 1790, 2283, 2771, 2772, 3853
BseJI GATNNNNATC 3 cut(s) 816, 822, 1802
BseLI CCNNNNNNNGG 6 cut(s) 56, 542, 1282, 1641, 2966, 3632
BseMI GCAATG 2 cut(s) 1055, 1377
BseMII CTCAG 4 cut(s) 1334, 1602, 2454, 3696
BseNI ACTGG 5 cut(s) 723, 1319, 2231, 3031, 3403
BseRI GAGGAG 3 cut(s) 176, 2825, 3188
BseSI GKGCMC 2 cut(s) 534, 1957
BsgI GTGCAG 3 cut(s) 1583, 3330, 3641
BshNI GGYRCC 1 cut(s) 95
BsiHKAI GWGCWC 1 cut(s) 3591
BsiHKCI CYCGRG 2 cut(s) 2490, 2772
BsiSI CCGG 4 cut(s) 57, 2764, 2773, 3495
BslFI GGGAC 3 cut(s) 912, 1185, 1763
BslI CCNNNNNNNGG 6 cut(s) 56, 542, 1282, 1641, 2966, 3632
BsmAI GTCTC 8 cut(s) 100, 457, 1133, 2137, 2885, 3463, 3655, 4059
BsmFI GGGAC 3 cut(s) 912, 1185, 1763
BsmI GAATGC 2 cut(s) 138, 2110
Bso31I GGTCTC 4 cut(s) 457, 2885, 3655, 4059
BsoBI CYCGRG 2 cut(s) 2490, 2772
Bsp120I GGGCCC 1 cut(s) 530
Bsp1286I GDGCHC 4 cut(s) 534, 1321, 1957, 3591
Bsp19I CCATGG 2 cut(s) 1790, 3853
BspACI CCGC 2 cut(s) 292, 334
BspCNI CTCAG 4 cut(s) 1333, 1603, 2455, 3695
BspHI TCATGA 1 cut(s) 9
BspLI GGNNCC 9 cut(s) 97, 428, 532, 533, 1201, 1751, 1805, 2762, 3529
BspMAI CTGCAG 1 cut(s) 1128
BspQI GCTCTTC 1 cut(s) 27
BspT107I GGYRCC 1 cut(s) 95
BspTNI GGTCTC 4 cut(s) 457, 2885, 3655, 4059
BsrDI GCAATG 2 cut(s) 1055, 1377
BsrI ACTGG 5 cut(s) 723, 1319, 2231, 3031, 3403
BssECI CCNNGG 7 cut(s) 535, 567, 1790, 2283, 2771, 2772, 3853
BssNAI GTATAC 2 cut(s) 3602, 3766
BssT1I CCWWGG 4 cut(s) 567, 1790, 2283, 3853
Bst1107I GTATAC 2 cut(s) 3602, 3766
Bst2UI CCWGG 4 cut(s) 537, 2538, 2868, 3223
Bst6I CTCTTC 2 cut(s) 27, 1157
BstBAI YACGTR 2 cut(s) 117, 2094
BstC8I GCNNGC 5 cut(s) 1131, 2218, 2374, 2680, 3415
BstDEI CTNAG 5 cut(s) 1320, 1611, 2463, 3335, 3682
BstDSI CCRYGG 2 cut(s) 1790, 3853
BstENI CCTNNNNNAGG 1 cut(s) 1280
BstMAI GTCTC 8 cut(s) 100, 457, 1133, 2137, 2885, 3463, 3655, 4059
BstMWI GCNNNNNNNGC 8 cut(s) 728, 1115, 1505, 2767, 2984, 3138, 3254, 3491
BstNI CCWGG 4 cut(s) 537, 2538, 2868, 3223
BstNSI RCATGY 1 cut(s) 2150
BstSCI CCNGG 6 cut(s) 535, 2536, 2771, 2772, 2866, 3221
BstSFI CTRYAG 5 cut(s) 1124, 1852, 3036, 3462, 3904
BstSLI GKGCMC 2 cut(s) 534, 1957
BstSNI TACGTA 1 cut(s) 117
BstV2I GAAGAC 2 cut(s) 227, 2618
BstX2I RGATCY 6 cut(s) 811, 1803, 2079, 3520, 3550, 3720
BstXI CCANNNNNNTGG 3 cut(s) 2590, 3222, 3982
BstYI RGATCY 6 cut(s) 811, 1803, 2079, 3520, 3550, 3720
BstZ17I GTATAC 2 cut(s) 3602, 3766
Bsu36I CCTNAGG 1 cut(s) 2463
BsuI GTATCC 1 cut(s) 2684
BtgI CCRYGG 2 cut(s) 1790, 3853
BtgZI GCGATG 2 cut(s) 2095, 3578
BtsIMutI CAGTG 8 cut(s) 711, 716, 1861, 3024, 3024, 3410, 3459, 3624
Cac8I GCNNGC 5 cut(s) 1131, 2218, 2374, 2680, 3415
CciI TCATGA 1 cut(s) 9
Cfr13I GGNCC 8 cut(s) 289, 530, 531, 749, 998, 1199, 1750, 3131
Cfr9I CCCGGG 1 cut(s) 2772
DdeI CTNAG 5 cut(s) 1320, 1611, 2463, 3335, 3682
DraI TTTAAA 1 cut(s) 348
EaeI YGGCCR 3 cut(s) 1506, 3492, 3870
Eam1104I CTCTTC 2 cut(s) 27, 1157
EarI CTCTTC 2 cut(s) 27, 1157
Eco105I TACGTA 1 cut(s) 117
Eco130I CCWWGG 4 cut(s) 567, 1790, 2283, 3853
Eco147I AGGCCT 2 cut(s) 1333, 2536
Eco24I GRGCYC 2 cut(s) 534, 1321
Eco31I GGTCTC 4 cut(s) 457, 2885, 3655, 4059
Eco32I GATATC 2 cut(s) 1029, 3951
Eco47I GGWCC 5 cut(s) 289, 749, 998, 1199, 1750
Eco57I CTGAAG 3 cut(s) 348, 1386, 2276
Eco81I CCTNAGG 1 cut(s) 2463
Eco88I CYCGRG 2 cut(s) 2490, 2772
EcoNI CCTNNNNNAGG 1 cut(s) 1280
EcoO109I RGGNCCY 3 cut(s) 530, 531, 1199
EcoRI GAATTC 3 cut(s) 1534, 3292, 3970
EcoRII CCWGG 4 cut(s) 535, 2536, 2866, 3221
EcoRV GATATC 2 cut(s) 1029, 3951
EcoT14I CCWWGG 4 cut(s) 567, 1790, 2283, 3853
EcoT38I GRGCYC 2 cut(s) 534, 1321
ErhI CCWWGG 4 cut(s) 567, 1790, 2283, 3853
FalI AAGNNNNNCTT 2 cut(s) 3246, 3278
FaqI GGGAC 3 cut(s) 912, 1185, 1763
FauNDI CATATG 1 cut(s) 1710
FbaI TGATCA 2 cut(s) 12, 1839
FblI GTMKAC 3 cut(s) 1545, 3601, 3765
FriOI GRGCYC 2 cut(s) 534, 1321
FspBI CTAG 9 cut(s) 239, 732, 848, 1574, 1722, 1958, 2501, 2979, 3410
GsuI CTGGAG 2 cut(s) 2559, 3228
HapII CCGG 4 cut(s) 57, 2764, 2773, 3495
HincII GTYRAC 2 cut(s) 677, 1458
HindII GTYRAC 2 cut(s) 677, 1458
HindIII AAGCTT 2 cut(s) 363, 1497
HinfI GANTC 8 cut(s) 68, 73, 199, 900, 972, 1992, 2738, 2783
HpaII CCGG 4 cut(s) 57, 2764, 2773, 3495
Hpy99I CGWCG 1 cut(s) 556
HpyCH4IV ACGT 7 cut(s) 116, 554, 754, 1086, 1185, 1824, 2093
HpyF10VI GCNNNNNNNGC 8 cut(s) 728, 1115, 1505, 2767, 2984, 3138, 3254, 3491
HpyF3I CTNAG 5 cut(s) 1320, 1611, 2463, 3335, 3682
HpySE526I ACGT 7 cut(s) 116, 554, 754, 1086, 1185, 1824, 2093
Ksp22I TGATCA 2 cut(s) 12, 1839
LguI GCTCTTC 1 cut(s) 27
LmnI GCTCC 6 cut(s) 1618, 1655, 2766, 2821, 3533, 4018
LweI GCATC 7 cut(s) 392, 978, 2304, 2351, 2965, 3067, 3266
MaeI CTAG 9 cut(s) 239, 732, 848, 1574, 1722, 1958, 2501, 2979, 3410
MaeII ACGT 7 cut(s) 116, 554, 754, 1086, 1185, 1824, 2093
MfeI CAATTG 2 cut(s) 2910, 2991
MflI RGATCY 6 cut(s) 811, 1803, 2079, 3520, 3550, 3720
MhlI GDGCHC 4 cut(s) 534, 1321, 1957, 3591
MlsI TGGCCA 2 cut(s) 1508, 3872
MluNI TGGCCA 2 cut(s) 1508, 3872
MlyI GAGTC 5 cut(s) 77, 82, 894, 966, 2747
MmeI TCCRAC 8 cut(s) 210, 286, 344, 727, 976, 2120, 2839, 3210
Mox20I TGGCCA 2 cut(s) 1508, 3872
MscI TGGCCA 2 cut(s) 1508, 3872
MseI TTAA 7 cut(s) 347, 411, 779, 1112, 1425, 1689, 2118
MslI CAYNNNNRTG 5 cut(s) 413, 1835, 2588, 3464, 3485
Msp20I TGGCCA 2 cut(s) 1508, 3872
MspI CCGG 4 cut(s) 57, 2764, 2773, 3495
MspR9I CCNGG 6 cut(s) 537, 2538, 2773, 2774, 2868, 3223
MunI CAATTG 2 cut(s) 2910, 2991
Mva1269I GAATGC 2 cut(s) 138, 2110
MvaI CCWGG 4 cut(s) 537, 2538, 2868, 3223
MwoI GCNNNNNNNGC 8 cut(s) 728, 1115, 1505, 2767, 2984, 3138, 3254, 3491
NciI CCSGG 2 cut(s) 2773, 2774
NcoI CCATGG 2 cut(s) 1790, 3853
NdeI CATATG 1 cut(s) 1710
NlaIV GGNNCC 9 cut(s) 97, 428, 532, 533, 1201, 1751, 1805, 2762, 3529
NmuCI GTSAC 4 cut(s) 1285, 1717, 2725, 2846
NspI RCATGY 1 cut(s) 2150
OliI CACNNNNGTG 1 cut(s) 3464
PagI TCATGA 1 cut(s) 9
PceI AGGCCT 2 cut(s) 1333, 2536
PciI ACATGT 1 cut(s) 2146
PciSI GCTCTTC 1 cut(s) 27
PctI GAATGC 2 cut(s) 138, 2110
PfeI GAWTC 3 cut(s) 199, 1992, 2783
PleI GAGTC 5 cut(s) 76, 81, 894, 966, 2746
PpsI GAGTC 5 cut(s) 76, 81, 894, 966, 2746
Ppu21I YACGTR 2 cut(s) 117, 2094
PpuMI RGGWCCY 1 cut(s) 1199
PscI ACATGT 1 cut(s) 2146
PshBI ATTAAT 2 cut(s) 411, 1112
Psp5II RGGWCCY 1 cut(s) 1199
Psp6I CCWGG 4 cut(s) 535, 2536, 2866, 3221
PspGI CCWGG 4 cut(s) 535, 2536, 2866, 3221
PspN4I GGNNCC 9 cut(s) 97, 428, 532, 533, 1201, 1751, 1805, 2762, 3529
PspOMI GGGCCC 1 cut(s) 530
PspPI GGNCC 8 cut(s) 289, 530, 531, 749, 998, 1199, 1750, 3131
PspPPI RGGWCCY 1 cut(s) 1199
PstI CTGCAG 1 cut(s) 1128
PsuI RGATCY 6 cut(s) 811, 1803, 2079, 3520, 3550, 3720
RseI CAYNNNNRTG 5 cut(s) 413, 1835, 2588, 3464, 3485
SapI GCTCTTC 1 cut(s) 27
SaqAI TTAA 7 cut(s) 347, 411, 779, 1112, 1425, 1689, 2118
Sau96I GGNCC 8 cut(s) 289, 530, 531, 749, 998, 1199, 1750, 3131
ScaI AGTACT 3 cut(s) 1011, 2328, 3340
SchI GAGTC 5 cut(s) 77, 82, 894, 966, 2747
ScrFI CCNGG 6 cut(s) 537, 2538, 2773, 2774, 2868, 3223
SduI GDGCHC 4 cut(s) 534, 1321, 1957, 3591
SfaNI GCATC 7 cut(s) 392, 978, 2304, 2351, 2965, 3067, 3266
SfcI CTRYAG 5 cut(s) 1124, 1852, 3036, 3462, 3904
SfiI GGCCNNNNNGGCC 1 cut(s) 3138
SinI GGWCC 5 cut(s) 289, 749, 998, 1199, 1750
SmaI CCCGGG 1 cut(s) 2774
SmiI ATTTAAAT 1 cut(s) 348
SmiMI CAYNNNNRTG 5 cut(s) 413, 1835, 2588, 3464, 3485
SmlI CTYRAG 5 cut(s) 278, 887, 1217, 2309, 4056
SmoI CTYRAG 5 cut(s) 278, 887, 1217, 2309, 4056
SnaBI TACGTA 1 cut(s) 117
SseBI AGGCCT 2 cut(s) 1333, 2536
SsiI CCGC 2 cut(s) 292, 334
SspI AATATT 4 cut(s) 802, 868, 2946, 3383
SspMI CTAG 9 cut(s) 239, 732, 848, 1574, 1722, 1958, 2501, 2979, 3410
StuI AGGCCT 2 cut(s) 1333, 2536
StyD4I CCNGG 6 cut(s) 535, 2536, 2771, 2772, 2866, 3221
StyI CCWWGG 4 cut(s) 567, 1790, 2283, 3853
SwaI ATTTAAAT 1 cut(s) 348
TaiI ACGT 7 cut(s) 119, 557, 757, 1089, 1188, 1827, 2096
TaqI TCGA 9 cut(s) 71, 339, 903, 1155, 1942, 2433, 2454, 2939, 3896
TaqII GACCGA 1 cut(s) 137
TatI WGTACW 6 cut(s) 1009, 1230, 2326, 3338, 3366, 3678
TfiI GAWTC 3 cut(s) 199, 1992, 2783
Tru1I TTAA 7 cut(s) 347, 411, 779, 1112, 1425, 1689, 2118
Tru9I TTAA 7 cut(s) 347, 411, 779, 1112, 1425, 1689, 2118
TscAI CASTG 8 cut(s) 711, 723, 1861, 3024, 3031, 3410, 3466, 3624
TseFI GTSAC 4 cut(s) 1285, 1717, 2725, 2846
Tsp45I GTSAC 4 cut(s) 1285, 1717, 2725, 2846
TspGWI ACGGA 1 cut(s) 1116
TspMI CCCGGG 1 cut(s) 2772
TspRI CASTG 8 cut(s) 711, 723, 1861, 3024, 3031, 3410, 3466, 3624
VpaK11BI GGWCC 5 cut(s) 289, 749, 998, 1199, 1750
VspI ATTAAT 2 cut(s) 411, 1112
XagI CCTNNNNNAGG 1 cut(s) 1280
XceI RCATGY 1 cut(s) 2150
XcmI CCANNNNNNNNNTGG 2 cut(s) 488, 1928
XmaI CCCGGG 1 cut(s) 2772
XmiI GTMKAC 3 cut(s) 1545, 3601, 3765
XspI CTAG 9 cut(s) 239, 732, 848, 1574, 1722, 1958, 2501, 2979, 3410
ZrmI AGTACT 3 cut(s) 1011, 2328, 3340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.