RLG00000003000
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000493
Physical Location & Seq
Forward (+)
42881506 .. 42886166
4661 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003000

Sequence Viewer

Length: 1548 bp
ATGAACATCACATTCAGCCAAGAACAAGAAGAAGAGGCAATCTCCGAGCCTCCTTCCGGTGAAGGAGCCGATGAAGAGTCCAGTCTGACAATGACGACGTACTGGGCTGCTGTAGAGTGGTTACCTACTTATTCCCGAACAAGGAGAGGAATTCTACTCGGTCAAGGTCAAGAGGAGGTCGGTAAAAGCAGAGAGATTGATATCAAGAAGAATCTTGGCCTACGAGAGAGGAAGACTTTGCTGGAGAGGCTGGTGCAGACTGTTGAGCAAGATAATGAAAAAGTTGGACTTGAATTTCCAACAACTGAAGTGCGGTTCGAACATTTAAATGTTGAAGCTAAGGCTTATGTAGGAACCAGGGCGTCACCTACAGTGTTCAACTTCTCCATCAATATGTTAGAGAATGACACTTCTTTTAGCTCTGGAAAGACCACGTTCTTATTGGCGTTGGCTGGAAAACTCGGTAAAGCTAATCTAAAATTTTCGGGTAGAGTTTCATACAATGGAAGTGAGATGGATAAGTTTGTATCAGACAGGATGTCAGCTTATGTTACTCAACACGATCTACATATTCCAGAACTGACAGTGAGAGAGACACTGGCTTTTGCAGCTAGAAGTCAAGGTGTTGGACCACGTTATGGGGAGCTGCCGGTTGGACCAGAAAGAGTGCTTCTAAAGGATGAAATATCCAATGGGATGGACAGCTCAACAACATTGCAATTACCAGCACCGGAGGTGTACGATCTCTTTGATGATATAATTCTCCTCTCGGATGGCTACATCGTTTATCAGGGTCCACGTGAGAATGTTCTTGAGTTCTTTGAGTACATGGGCTTCAAATGTCCAGAGAGGAAAGGAGTTGCCGATTTCCTGCAAGAGGTGACATCAAGAAAAGATCAAGAGATATACTGGGCTCATAGGGATAGGCCTTATAGATTTGTAACAACCAAAGCATTCTCTGAAGCAATGCAGGTATTTCACATCGGTAGAAAAGTTGGTGATGAGCTTTCTATTCCATTTAACAAGTCCGAAGGCCACCCTGCTGCTTTGTCAACTAAAAAATATGGTGTTAATAAGAAGGAATTGTTCAAAGCTTGTATGGCCAGACAAATTTTGCTTACGAAGAGGAATTCGTTTGTCTACATTTTCAAATTGGTTCAGGGACCATCTGTTCTATCCTGCTTGGGCATACTCTTTACCCACATGGATGATAAGGATCCGTATAACTTTTGTGGACGTTTCCATCTAGGTGATCATAACTTACTACCTATAGGTTATGATCCGAGCATTGAAAGATGGACACTATCAATTCTATGTTTTGACAATCCTAACAATTTCGTGGATGCAGCACTTGAGATGCCCCAAGCAGTACTATCCAATGAGGCATCCTCTACAACAGAAGATAGCGGAGTTGCAAGCAATCCTACTAGGCAGCATGGCATGGTTCTTCCATTTGAACCCCTTTCATTTACTTTCGAGCAAATCAGATATGCTGTTGATATGCCTGAGGAAATGAAAGAGATCAAAGCAAAGCTGGGGATCGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

516

Amino Acids

58.1

Weight (kDa)

5.27

Isoelectric Point (pI)

43.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC2_membrane_7 PF19055 242 - 319 2.8e-06 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 961
AccB7I CCANNNNNTGG 1 cut(s) 638
AccI GTMKAC 1 cut(s) 1140
AciI CCGC 2 cut(s) 313, 1407
AclWI GGATC 4 cut(s) 1211, 1224, 1274, 1547
AcoI YGGCCR 1 cut(s) 1101
AcsI RAATTY 5 cut(s) 150, 293, 479, 1110, 1129
AcuI CTGAAG 2 cut(s) 327, 981
AcvI CACGTG 1 cut(s) 800
AcyI GRCGYC 1 cut(s) 362
AfaI GTAC 4 cut(s) 101, 740, 827, 1371
AfiI CCNNNNNNNGG 4 cut(s) 56, 141, 638, 877
AgsI TTSAA 8 cut(s) 293, 335, 379, 838, 1090, 1150, 1292, 1457
AhdI GACNNNNNGTC 1 cut(s) 538
AjnI CCWGG 1 cut(s) 356
AloI GAACNNNNNNTCC 2 cut(s) 1155, 1187
Alw26I GTCTC 1 cut(s) 587
AlwI GGATC 4 cut(s) 1211, 1224, 1274, 1547
AoxI GGCC 4 cut(s) 217, 926, 1033, 1101
ApeKI GCWGC 6 cut(s) 107, 608, 646, 1043, 1346, 1432
ApoI RAATTY 5 cut(s) 150, 293, 479, 1110, 1129
AspS9I GGNCC 4 cut(s) 629, 656, 794, 1163
AsuHPI GGTGA 5 cut(s) 71, 357, 892, 1010, 1262
AsuII TTCGAA 1 cut(s) 318
AvaII GGWCC 4 cut(s) 629, 656, 794, 1163
AxyI CCTNAGG 1 cut(s) 1506
BalI TGGCCA 1 cut(s) 1103
BamHI GGATCC 1 cut(s) 1216
BanII GRGCYC 1 cut(s) 916
BarI GAAGNNNNNNTAC 2 cut(s) 818, 850
BbrPI CACGTG 1 cut(s) 800
BbsI GAAGAC 1 cut(s) 239
BbvI GCAGC 6 cut(s) 94, 620, 633, 1030, 1358, 1444
BccI CCATC 7 cut(s) 395, 508, 691, 767, 1174, 1251, 1290
BciT130I CCWGG 1 cut(s) 358
BclI TGATCA 1 cut(s) 1252
BcoDI GTCTC 1 cut(s) 587
BfaI CTAG 4 cut(s) 612, 1247, 1428, 1546
BfmI CTRYAG 3 cut(s) 111, 369, 1269
BfuAI ACCTGC 1 cut(s) 961
BisI GCNGC 6 cut(s) 108, 609, 647, 1044, 1347, 1433
BlsI GCNGC 6 cut(s) 109, 610, 648, 1045, 1348, 1434
BmcAI AGTACT 1 cut(s) 1371
Bme1390I CCNGG 1 cut(s) 358
Bme18I GGWCC 4 cut(s) 629, 656, 794, 1163
BmeRI GACNNNNNGTC 1 cut(s) 538
BmgT120I GGNCC 4 cut(s) 629, 656, 794, 1163
BmiI GGNNCC 5 cut(s) 67, 355, 795, 1164, 1218
BmrFI CCNGG 1 cut(s) 358
BmrI ACTGGG 2 cut(s) 112, 919
BmsI GCATC 3 cut(s) 1333, 1347, 1394
BmuI ACTGGG 2 cut(s) 112, 919
BpiI GAAGAC 1 cut(s) 239
BplI GAGNNNNNCTC 4 cut(s) 26, 58, 1373, 1405
BpmI CTGGAG 1 cut(s) 263
Bpu10I CCTNAGC 1 cut(s) 339
Bpu14I TTCGAA 1 cut(s) 318
BpuEI CTTGAG 2 cut(s) 833, 1373
BsaAI YACGTR 1 cut(s) 800
BsaBI GATNNNNATC 2 cut(s) 200, 1215
BsaHI GRCGYC 1 cut(s) 362
BsaJI CCNNGG 1 cut(s) 357
BsaWI WCCGGW 2 cut(s) 56, 730
Bsc4I CCNNNNNNNGG 4 cut(s) 56, 141, 638, 877
Bse118I RCCGGY 1 cut(s) 649
Bse1I ACTGG 4 cut(s) 81, 107, 603, 914
Bse21I CCTNAGG 1 cut(s) 1506
Bse3DI GCAATG 2 cut(s) 713, 972
Bse8I GATNNNNATC 2 cut(s) 200, 1215
BseBI CCWGG 1 cut(s) 358
BseDI CCNNGG 1 cut(s) 357
BseGI GGATG 7 cut(s) 543, 685, 702, 778, 1213, 1348, 1385
BseJI GATNNNNATC 2 cut(s) 200, 1215
BseLI CCNNNNNNNGG 4 cut(s) 56, 141, 638, 877
BseMI GCAATG 2 cut(s) 713, 972
BseMII CTCAG 1 cut(s) 1497
BseNI ACTGG 4 cut(s) 81, 107, 603, 914
BseRI GAGGAG 2 cut(s) 188, 755
BseXI GCAGC 6 cut(s) 94, 620, 633, 1030, 1358, 1444
BseYI CCCAGC 1 cut(s) 1534
BsgI GTGCAG 1 cut(s) 275
BshFI GGCC 4 cut(s) 219, 928, 1035, 1103
BsiSI CCGG 3 cut(s) 57, 650, 731
BslFI GGGAC 1 cut(s) 1176
BslI CCNNNNNNNGG 4 cut(s) 56, 141, 638, 877
BsmAI GTCTC 1 cut(s) 587
BsmFI GGGAC 1 cut(s) 1176
BsmI GAATGC 1 cut(s) 953
BsnI GGCC 4 cut(s) 219, 928, 1035, 1103
Bsp119I TTCGAA 1 cut(s) 318
Bsp1286I GDGCHC 1 cut(s) 916
Bsp143I GATC 8 cut(s) 562, 742, 895, 1216, 1252, 1279, 1521, 1539
BspACI CCGC 2 cut(s) 313, 1407
BspANI GGCC 4 cut(s) 219, 928, 1035, 1103
BspCNI CTCAG 1 cut(s) 1498
BspLI GGNNCC 5 cut(s) 67, 355, 795, 1164, 1218
BspMI ACCTGC 1 cut(s) 961
BspPI GGATC 4 cut(s) 1211, 1224, 1274, 1547
BspT104I TTCGAA 1 cut(s) 318
BsrDI GCAATG 2 cut(s) 713, 972
BsrFI RCCGGY 1 cut(s) 649
BsrI ACTGG 4 cut(s) 81, 107, 603, 914
BssAI RCCGGY 1 cut(s) 649
BssECI CCNNGG 1 cut(s) 357
BssMI GATC 8 cut(s) 562, 742, 895, 1216, 1252, 1279, 1521, 1539
BssNI GRCGYC 1 cut(s) 362
Bst2UI CCWGG 1 cut(s) 358
Bst4CI ACNGT 3 cut(s) 262, 373, 586
Bst6I CTCTTC 3 cut(s) 27, 69, 1118
BstACI GRCGYC 1 cut(s) 362
BstBAI YACGTR 1 cut(s) 800
BstBI TTCGAA 1 cut(s) 318
BstC8I GCNNGC 1 cut(s) 1417
BstDEI CTNAG 2 cut(s) 339, 1506
BstEII GGTNACC 1 cut(s) 120
BstENI CCTNNNNNAGG 1 cut(s) 875
BstF5I GGATG 7 cut(s) 543, 685, 702, 778, 1213, 1348, 1385
BstKTI GATC 8 cut(s) 565, 745, 898, 1219, 1255, 1282, 1524, 1542
BstMAI GTCTC 1 cut(s) 587
BstMBI GATC 8 cut(s) 562, 742, 895, 1216, 1252, 1279, 1521, 1539
BstMWI GCNNNNNNNGC 3 cut(s) 247, 608, 1100
BstNI CCWGG 1 cut(s) 358
BstPI GGTNACC 1 cut(s) 120
BstSCI CCNGG 1 cut(s) 356
BstSFI CTRYAG 3 cut(s) 111, 369, 1269
BstV1I GCAGC 6 cut(s) 94, 620, 633, 1030, 1358, 1444
BstV2I GAAGAC 1 cut(s) 239
BstX2I RGATCY 1 cut(s) 1216
BstXI CCANNNNNNTGG 1 cut(s) 697
BstYI RGATCY 1 cut(s) 1216
Bsu36I CCTNAGG 1 cut(s) 1506
BsuRI GGCC 4 cut(s) 219, 928, 1035, 1103
BtsCI GGATG 7 cut(s) 543, 685, 702, 778, 1213, 1348, 1385
BtsIMutI CAGTG 3 cut(s) 378, 591, 596
BveI ACCTGC 1 cut(s) 961
Cac8I GCNNGC 1 cut(s) 1417
Cfr10I RCCGGY 1 cut(s) 649
Cfr13I GGNCC 4 cut(s) 629, 656, 794, 1163
CseI GACGC 1 cut(s) 351
Csp6I GTAC 4 cut(s) 100, 739, 826, 1370
CviAII CATG 4 cut(s) 829, 1204, 1436, 1441
CviQI GTAC 4 cut(s) 100, 739, 826, 1370
DdeI CTNAG 2 cut(s) 339, 1506
DpnI GATC 8 cut(s) 564, 744, 897, 1218, 1254, 1281, 1523, 1541
DpnII GATC 8 cut(s) 562, 742, 895, 1216, 1252, 1279, 1521, 1539
DraI TTTAAA 1 cut(s) 327
DriI GACNNNNNGTC 1 cut(s) 538
EaeI YGGCCR 1 cut(s) 1101
Eam1104I CTCTTC 3 cut(s) 27, 69, 1118
Eam1105I GACNNNNNGTC 1 cut(s) 538
EarI CTCTTC 3 cut(s) 27, 69, 1118
Eco147I AGGCCT 1 cut(s) 928
Eco24I GRGCYC 1 cut(s) 916
Eco32I GATATC 1 cut(s) 202
Eco47I GGWCC 4 cut(s) 629, 656, 794, 1163
Eco57I CTGAAG 2 cut(s) 327, 981
Eco72I CACGTG 1 cut(s) 800
Eco81I CCTNAGG 1 cut(s) 1506
Eco91I GGTNACC 1 cut(s) 120
EcoNI CCTNNNNNAGG 1 cut(s) 875
EcoO65I GGTNACC 1 cut(s) 120
EcoRI GAATTC 2 cut(s) 150, 1129
EcoRII CCWGG 1 cut(s) 356
EcoRV GATATC 1 cut(s) 202
EcoT38I GRGCYC 1 cut(s) 916
FaeI CATG 4 cut(s) 832, 1207, 1439, 1444
FalI AAGNNNNNCTT 2 cut(s) 273, 305
FaqI GGGAC 1 cut(s) 1176
FatI CATG 4 cut(s) 828, 1203, 1435, 1440
FbaI TGATCA 1 cut(s) 1252
FblI GTMKAC 1 cut(s) 1140
Fnu4HI GCNGC 6 cut(s) 108, 609, 647, 1044, 1347, 1433
FokI GGATG 7 cut(s) 550, 692, 709, 785, 1220, 1355, 1372
FriOI GRGCYC 1 cut(s) 916
Fsp4HI GCNGC 6 cut(s) 108, 609, 647, 1044, 1347, 1433
FspBI CTAG 4 cut(s) 612, 1247, 1428, 1546
GluI GCNGC 6 cut(s) 108, 609, 647, 1044, 1347, 1433
GsaI CCCAGC 1 cut(s) 1538
GsuI CTGGAG 1 cut(s) 263
HaeIII GGCC 4 cut(s) 219, 928, 1035, 1103
HapII CCGG 3 cut(s) 57, 650, 731
HgaI GACGC 1 cut(s) 351
Hin1I GRCGYC 1 cut(s) 362
Hin1II CATG 4 cut(s) 832, 1207, 1439, 1444
HincII GTYRAC 1 cut(s) 1053
HindII GTYRAC 1 cut(s) 1053
HindIII AAGCTT 1 cut(s) 1092
HinfI GANTC 2 cut(s) 77, 211
HpaII CCGG 3 cut(s) 57, 650, 731
HphI GGTGA 5 cut(s) 71, 357, 892, 1010, 1262
Hpy166II GTNNAC 5 cut(s) 739, 797, 1053, 1141, 1235
Hpy188I TCNGA 8 cut(s) 46, 87, 532, 772, 961, 1030, 1284, 1487
Hpy188III TCNNGA 9 cut(s) 135, 170, 205, 423, 575, 812, 845, 888, 899
Hpy8I GTNNAC 5 cut(s) 739, 797, 1053, 1141, 1235
Hpy99I CGWCG 1 cut(s) 100
HpyAV CCTTC 4 cut(s) 56, 63, 1025, 1072
HpyCH4III ACNGT 3 cut(s) 262, 373, 586
HpyCH4IV ACGT 5 cut(s) 98, 434, 634, 799, 1237
HpyCH4V TGCA 7 cut(s) 256, 608, 718, 874, 970, 1346, 1415
HpyF10VI GCNNNNNNNGC 3 cut(s) 247, 608, 1100
HpyF3I CTNAG 2 cut(s) 339, 1506
HpySE526I ACGT 5 cut(s) 98, 434, 634, 799, 1237
Hsp92I GRCGYC 1 cut(s) 362
Hsp92II CATG 4 cut(s) 832, 1207, 1439, 1444
Ksp22I TGATCA 1 cut(s) 1252
Kzo9I GATC 8 cut(s) 562, 742, 895, 1216, 1252, 1279, 1521, 1539
LmnI GCTCC 2 cut(s) 65, 643
Lsp1109I GCAGC 6 cut(s) 94, 620, 633, 1030, 1358, 1444
LweI GCATC 3 cut(s) 1333, 1347, 1394
MaeI CTAG 4 cut(s) 612, 1247, 1428, 1546
MaeII ACGT 5 cut(s) 98, 434, 634, 799, 1237
MaeIII GTNAC 5 cut(s) 120, 363, 550, 880, 940
MalI GATC 8 cut(s) 564, 744, 897, 1218, 1254, 1281, 1523, 1541
MboI GATC 8 cut(s) 562, 742, 895, 1216, 1252, 1279, 1521, 1539
MboII GAAGA 8 cut(s) 41, 44, 86, 220, 244, 1135, 1412, 1439
MflI RGATCY 1 cut(s) 1216
MhlI GDGCHC 1 cut(s) 916
MlsI TGGCCA 1 cut(s) 1103
MluNI TGGCCA 1 cut(s) 1103
MlyI GAGTC 1 cut(s) 86
MmeI TCCRAC 4 cut(s) 265, 323, 607, 634
Mox20I TGGCCA 1 cut(s) 1103
MscI TGGCCA 1 cut(s) 1103
MseI TTAA 3 cut(s) 326, 1020, 1071
MslI CAYNNNNRTG 4 cut(s) 327, 392, 1206, 1248
Msp20I TGGCCA 1 cut(s) 1103
MspI CCGG 3 cut(s) 57, 650, 731
MspR9I CCNGG 1 cut(s) 358
Mva1269I GAATGC 1 cut(s) 953
MvaI CCWGG 1 cut(s) 358
MwoI GCNNNNNNNGC 3 cut(s) 247, 608, 1100
NdeII GATC 8 cut(s) 562, 742, 895, 1216, 1252, 1279, 1521, 1539
NlaIII CATG 4 cut(s) 832, 1207, 1439, 1444
NlaIV GGNNCC 5 cut(s) 67, 355, 795, 1164, 1218
NmuCI GTSAC 2 cut(s) 363, 880
NspV TTCGAA 1 cut(s) 318
PceI AGGCCT 1 cut(s) 928
PctI GAATGC 1 cut(s) 953
PfeI GAWTC 1 cut(s) 211
PflMI CCANNNNNTGG 1 cut(s) 638
PkrI GCNGC 6 cut(s) 109, 610, 648, 1045, 1348, 1434
PleI GAGTC 1 cut(s) 85
PmaCI CACGTG 1 cut(s) 800
PmlI CACGTG 1 cut(s) 800
PpsI GAGTC 1 cut(s) 85
Ppu21I YACGTR 1 cut(s) 800
Psp6I CCWGG 1 cut(s) 356
PspCI CACGTG 1 cut(s) 800
PspEI GGTNACC 1 cut(s) 120
PspFI CCCAGC 1 cut(s) 1534
PspGI CCWGG 1 cut(s) 356
PspN4I GGNNCC 5 cut(s) 67, 355, 795, 1164, 1218
PspPI GGNCC 4 cut(s) 629, 656, 794, 1163
PsuI RGATCY 1 cut(s) 1216
RsaI GTAC 4 cut(s) 101, 740, 827, 1371
RsaNI GTAC 4 cut(s) 100, 739, 826, 1370
RseI CAYNNNNRTG 4 cut(s) 327, 392, 1206, 1248
SaqAI TTAA 3 cut(s) 326, 1020, 1071
SatI GCNGC 6 cut(s) 108, 609, 647, 1044, 1347, 1433
Sau3AI GATC 8 cut(s) 562, 742, 895, 1216, 1252, 1279, 1521, 1539
Sau96I GGNCC 4 cut(s) 629, 656, 794, 1163
ScaI AGTACT 1 cut(s) 1371
SchI GAGTC 1 cut(s) 86
ScrFI CCNGG 1 cut(s) 358
SduI GDGCHC 1 cut(s) 916
SfaNI GCATC 3 cut(s) 1333, 1347, 1394
SfcI CTRYAG 3 cut(s) 111, 369, 1269
SfuI TTCGAA 1 cut(s) 318
SinI GGWCC 4 cut(s) 629, 656, 794, 1163
SmiI ATTTAAAT 1 cut(s) 327
SmiMI CAYNNNNRTG 4 cut(s) 327, 392, 1206, 1248
SmlI CTYRAG 2 cut(s) 812, 1352
SmoI CTYRAG 2 cut(s) 812, 1352
SseBI AGGCCT 1 cut(s) 928
SsiI CCGC 2 cut(s) 313, 1407
SspMI CTAG 4 cut(s) 612, 1247, 1428, 1546
StuI AGGCCT 1 cut(s) 928
StyD4I CCNGG 1 cut(s) 356
SwaI ATTTAAAT 1 cut(s) 327
TaaI ACNGT 3 cut(s) 262, 373, 586
TaiI ACGT 5 cut(s) 101, 437, 637, 802, 1240
TaqI TCGA 2 cut(s) 318, 1476
TaqII GACCGA 1 cut(s) 149
TatI WGTACW 2 cut(s) 825, 1369
TfiI GAWTC 1 cut(s) 211
Tru1I TTAA 3 cut(s) 326, 1020, 1071
Tru9I TTAA 3 cut(s) 326, 1020, 1071
TscAI CASTG 3 cut(s) 378, 591, 603
TseFI GTSAC 2 cut(s) 363, 880
TseI GCWGC 6 cut(s) 107, 608, 646, 1043, 1346, 1432
Tsp45I GTSAC 2 cut(s) 363, 880
TspDTI ATGAA 7 cut(s) 17, 87, 291, 486, 696, 1455, 1529
TspGWI ACGGA 1 cut(s) 1209
TspRI CASTG 3 cut(s) 378, 591, 603
Van91I CCANNNNNTGG 1 cut(s) 638
VpaK11BI GGWCC 4 cut(s) 629, 656, 794, 1163
XagI CCTNNNNNAGG 1 cut(s) 875
XapI RAATTY 5 cut(s) 150, 293, 479, 1110, 1129
XcmI CCANNNNNNNNNTGG 1 cut(s) 439
XmiI GTMKAC 1 cut(s) 1140
XspI CTAG 4 cut(s) 612, 1247, 1428, 1546
ZrmI AGTACT 1 cut(s) 1371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.