Prupe.7G242900_v2.0.a1
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
20822102 .. 20828491
6390 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G242900.1

Sequence Viewer

Length: 3591 bp
ATGAACCTCGAACCAGAGCAGCAGCACCCGCCAAACTCCAAGTCTTCCCCTGAAGGAGAAGGAGAAGGAGCCGACGATCAAGTGTCCAATCTGAAAATGACGTCATGGGCTGCTCTAGAGCGACTGCCTACTCGCTCGAGAATAAGGAGAGGTATCTTAGTCTCCCACGATCAACAAGAGCAGGGTGGCCAAAACAGAGAGATTGATGTAAAGAAACTTGAGCCAATAGAAAGGAACAAGTTGCTGGAGAGGCTGCTCAAGATTAATAATGCTGCAGACGACCAAGATAATAATAATAATAATAATGGCGCCACGTCTTCCTTCTTGCTCAAGCTCAAGGACCGCATCCATAGAGTTGGACTTGAATTTCCAACAACTGAAGTGCGGTTCGAGAATTTGCACGTTGAAGCACAAGCTTACGTAGGAAGCAGGGCATCACCTACCATGCTCAACTTCTCCATCAATATGTTAAAGGGGTTCCTGAATTGTTTTCACATTCTTCCGAGTAAAAAAAACCCATTGCCAATCCTCCATGATGCAAGTGGAATTATCAAGCCAAGAAGGATGACACTACTTTTAGGCCCCCCAGGCTCTGGAAAGACCACATTACTATTGGCATTGGCTGGAAAACTTGATAAACATTATCTAAAACTTTCGGGGAGAGTTACATACAACGGACAAGGGATGGGGGAGTTTGTACCGCAGAGGACGGCAGCTTATGTTAGTCAACATGATCTCCACATACCAGAATTGACAGTGAGAGAAACGTTGGCTTTTTCAGCTAGATGTCAAGGGGTTGGACCACGTTATGAAATGTTGATAGAATTATCAAGGAGAGAGAAGGCTGCAAATATTATGCCAGATCTTGATCTTGATCTCATCATGAAGGCAGCAGCACTAAAAGGACCGGAAACCAATGTTGTTACAGATTTGATACTCAAGGTTCTGGGACTGGAAGCTTGTGCTGACACCGTGGTAGGGGACGAAATGACCAGAGGTATATCTGGTGGACAGAAAAAGAGAGTCACGACAGGGGAGATGCTGGTTGGACCAGAAAGAGTACTTTTTATGGATGAGATATCAACTGGCCTGGACAGTTCAACAACATTTCAAATAGTGAATTCACTGCGACAATACGTCCACATCCTCAACGGAACTGCATTAATCTCCCTCCTGCAGCCAGCACCAGAGACTTATGCTCTCTTTGATGATATAATTCTTCTCTCGGATGGCTACATTGTGTATCAAGGCCCCTGTGAGAATGTGCTTGAGTTCTTTGAGTACATGGGCTTCAAATGTCCAGAGAGGAAAGGAATTGCTGATTTCCTACAAGAAGTGACATCAAGGAAAGATCAAGAGCAATACTGGGTTCATAGAGAAAAGCCTTATGGCTTTGTAACAACCAAAGAATTTTCTGAAGCAATGAAGTCATTTCACATTGGTCGAAAACTTGGTGATGAGCTTGCTATTCCATTTAACAAGTCTGAAGGCCACCCTGCAGCATTAGCAACTAGGAAGAATGGTGTTAACAAGAAGGAACTGTTCAAAGCTTGTATGGACAGACAAATTTTGCTTATGAAGAGGAATAAGTTTGTCTACATTTTCAAATTGGCGCAGCTTATTGTAGCTGCTTTTGTAACAACGACGTTGTTCCTACGTACTGAGATGCACCGGAGCACAGTAGAAGATGGGGGAATTTATATGGGAGCTTTATTCTTTACACTGCTCTCAATTATGTTCAACGGGTTTGCAGAGCTTCATATGACTGTTGAGAGACTTCCCGTGTTCTTCAAGCAAAGGGACCATCTGTTCTATCCTGCTTGGGCATACTCTTTACCGCAATGGGTGATAAGGATCCCTATGACCTTTGTGGAAGTCTTCATTTGGATGATCATCACTTACTACACTATAGGTTATGATCCGAGCATTGGAAGGTTTTTCAAACAGTTCCTTGTACTACTGTGTATTAGTCAGATGGCAAATGGACTGTTTCGATTGATAGGAGCATTAGGAAGGAACATAACTGTTGCAAACACATTTGGGTTTGTTGCTTTCCTCGTCATTCTTGGTCTGGGTGGCTTTATCTTATCACAAGAGGATATGAACAAATGGACGTTGTGGGGATATTATCTCTCACCATTCACGTACGGACTGAATGCAATGGCTGTCAATGAATTTCTAGGAGAAAGTTGGAGCCAGGTTCCTGCCAACTCAACAGAAGCATTAGGAGTTTTAGTCTTGAAGTCTCGAGGGATATTCCCGGAAGCACGTTGGTACTGGATTGGAGTGGCAGCTTTGATTGGATTTATTCTTCTGTTCAATATCCTTTTCAATTTGGCACTTCAATATCTTGATCCACTTGAGGAGGCCCAGGCAGCAGTTTCCAATGAGGCTTTGGCTGCAACAGACGGTAGCAAAAATGCAGCAAATCGGACCAAGCAGCGCGGAGTGGTTCTTCCTTTTGAATCCCTTTCAGTTACGTTTGATGAAATTAGATATGCTGTTGACATGCCACAGGAAATGAAGGATCAAGGCATAACCGATGACCGGCATGAAATTCTGAAGGGTGTGAGTGGTACTTTTAGGCCTGGTGTCCTAACGGCTCTAATGGGTGTTAGTGGTGCTGGAAAAACTACTCTGCTGGATGTTTTGGCAGGAAGAAAAACAGGTGGATACATTGAGGGAAGCATCACCTTATCTGGATATCCAAAAAAGCAAGACACATTTGCTCGTGTAACAGGATATTGTGAGCAAACAGACATACACTCTCCCCATGTTACAGTTTATGAGTCTTTGGTTTACTCTACATGGCTCCGATTACCTCCAGAGGTCGATCTCCAGAACAGAAGGATGTTCATTGAGGAAGTAATGGAGCTTGTGGAGTTGACAACGATACGTGACGCACTTGTTGGATTGCCTGGAGTGAATGGTCTCTCAACTGAGCAGCGCAAACGGCTAACGATTGCGGTAGAGCTTGTTGCCAACCCATCCATCATATTTATGGATGAGCCGACCTCTGGCCTTGATGCCAGGGCAGCAGCAATTGTAATGAGAACAGTGAGGAATACAGTGGACACCGGAAGAACTGTAGTCTGCACCATCCACCAGCCAAGCATTGACATATTCGATGCTTTTGATGAGATGCTGCTTTTGAAACAGGAAGGGGAAGAAATCTATGTTGGCCCTTTAGGCCGCCATTCTTCCAAGTTGATCGAATACTTTGAGGGGATTAGAGGAGTTCCTAAAATAAAGGATGGTTACAATCCTGCAACTTGGATGTTGGAGGTTACTTCTGCAGCACAAGAAGCAGCTCTAGGGGTTAATTTCGCAGACATATACAAGCATTCAGAAATGTACAGGAGGAACAAGGCCTTGATCAAGGAACTAAGTACTCCTACACCAGATTCAAAAGACTTGCACTTTCCAACACAATATTCTCAGTCTTTCTTTACACAGTGTCTAGCTTGCCTATGGAAGCAACATGTATCATACTGGCGAAACCCACAATACAGTTCAGTGAGACTTTTTTACACAGCTATGATGGCTTTGCTATTTGGAACAATTTTCTGGGATCTTGGCTCCAAAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1197

Amino Acids

134.38

Weight (kDa)

6.6

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 104
AccB1I GGYRCC 1 cut(s) 308
AccB7I CCANNNNNTGG 1 cut(s) 593
AccI GTMKAC 1 cut(s) 1596
AccII CGCG 1 cut(s) 2445
AciI CCGC 8 cut(s) 29, 343, 385, 701, 1838, 2445, 2966, 3193
AclI AACGTT 1 cut(s) 767
AclWI GGATC 6 cut(s) 1849, 1862, 1913, 2348, 2535, 3579
AcoI YGGCCR 1 cut(s) 187
AcsI RAATTY 8 cut(s) 365, 394, 1120, 1409, 1566, 1695, 2174, 2556
AcuI CTGAAG 5 cut(s) 72, 399, 1437, 1506, 2582
AcyI GRCGYC 2 cut(s) 101, 309
AfiI CCNNNNNNNGG 5 cut(s) 593, 978, 1928, 2547, 3017
AflIII ACRYGT 1 cut(s) 3481
AhdI GACNNNNNGTC 1 cut(s) 1136
AjiI CACGTC 1 cut(s) 315
AjnI CCWGG 7 cut(s) 586, 1089, 2196, 2370, 2587, 2917, 3029
AjuI GAANNNNNNNTTGG 4 cut(s) 3162, 3194, 3418, 3450
AloI GAACNNNNNNTCC 2 cut(s) 1793, 1825
Alw21I GWGCWC 1 cut(s) 1679
Alw26I GTCTC 6 cut(s) 166, 1184, 1768, 2250, 2936, 3514
AlwI GGATC 6 cut(s) 1849, 1862, 1913, 2348, 2535, 3579
AlwNI CAGNNNCTG 1 cut(s) 593
Ama87I CYCGRG 2 cut(s) 136, 2247
ApoI RAATTY 8 cut(s) 365, 394, 1120, 1409, 1566, 1695, 2174, 2556
ArsI GACNNNNNNTTYG 2 cut(s) 26, 58
AseI ATTAAT 2 cut(s) 264, 1163
AspLEI GCGC 4 cut(s) 311, 1615, 2445, 2949
AsuC2I CCSGG 1 cut(s) 2261
AsuHPI GGTGA 5 cut(s) 429, 1466, 1858, 2127, 2683
AvaI CYCGRG 2 cut(s) 136, 2247
AvaII GGWCC 6 cut(s) 340, 800, 905, 1049, 1801, 2433
BalI TGGCCA 1 cut(s) 189
BamHI GGATCC 1 cut(s) 1854
BanI GGYRCC 1 cut(s) 308
BarI GAAGNNNNNNTAC 2 cut(s) 1274, 1306
BauI CACGAG 1 cut(s) 2730
BbsI GAAGAC 3 cut(s) 36, 309, 1870
Bbv12I GWGCWC 1 cut(s) 1679
BceAI ACGGC 3 cut(s) 726, 2616, 2969
BciT130I CCWGG 7 cut(s) 588, 1091, 2198, 2372, 2589, 2919, 3031
BciVI GTATCC 1 cut(s) 2666
BclI TGATCA 2 cut(s) 1890, 3375
BcnI CCSGG 1 cut(s) 2261
BcoDI GTCTC 6 cut(s) 166, 1184, 1768, 2250, 2936, 3514
BfaI CTAG 6 cut(s) 116, 783, 1512, 2180, 3314, 3461
BfmI CTRYAG 6 cut(s) 273, 1175, 1497, 1908, 3087, 3294
BfoI RGCGCY 1 cut(s) 312
BfuI GTATCC 1 cut(s) 2666
BglI GCCNNNNNGGC 2 cut(s) 588, 3189
BglII AGATCT 1 cut(s) 862
BmcAI AGTACT 2 cut(s) 1062, 3391
Bme1390I CCNGG 8 cut(s) 588, 1091, 2198, 2261, 2372, 2589, 2919, 3031
Bme18I GGWCC 6 cut(s) 340, 800, 905, 1049, 1801, 2433
BmeRI GACNNNNNGTC 1 cut(s) 1136
BmeT110I CYCGRG 2 cut(s) 136, 2247
BmgBI CACGTC 1 cut(s) 315
BmrFI CCNGG 8 cut(s) 588, 1091, 2198, 2261, 2372, 2589, 2919, 3031
BmrI ACTGGG 1 cut(s) 1375
BmsI GCATC 9 cut(s) 354, 443, 526, 1029, 1656, 2697, 3016, 3118, 3132
BmuI ACTGGG 1 cut(s) 1375
BpiI GAAGAC 3 cut(s) 36, 309, 1870
BplI GAGNNNNNCTC 2 cut(s) 2999, 3031
BpmI CTGGAG 4 cut(s) 266, 2808, 2822, 2940
BpuEI CTTGAG 7 cut(s) 239, 242, 314, 320, 923, 1289, 2381
BpuMI CCSGG 1 cut(s) 2261
BsaAI YACGTR 4 cut(s) 421, 1658, 2145, 2897
BsaBI GATNNNNATC 4 cut(s) 867, 873, 1853, 1892
BsaHI GRCGYC 2 cut(s) 101, 309
BsaI GGTCTC 1 cut(s) 2936
BsaJI CCNNGG 4 cut(s) 586, 972, 2370, 3030
BsaWI WCCGGW 3 cut(s) 907, 1671, 3077
BsaXI ACNNNNNCTCC 4 cut(s) 720, 750, 2220, 2250
Bsc4I CCNNNNNNNGG 5 cut(s) 593, 978, 1928, 2547, 3017
Bse118I RCCGGY 1 cut(s) 2547
Bse1I ACTGG 5 cut(s) 957, 1090, 1370, 2282, 3497
Bse3DI GCAATG 4 cut(s) 518, 1428, 1847, 2166
Bse8I GATNNNNATC 4 cut(s) 867, 873, 1853, 1892
BseBI CCWGG 7 cut(s) 588, 1091, 2198, 2372, 2589, 2919, 3031
BseDI CCNNGG 4 cut(s) 586, 972, 2370, 3030
BseJI GATNNNNATC 4 cut(s) 867, 873, 1853, 1892
BseLI CCNNNNNNNGG 5 cut(s) 593, 978, 1928, 2547, 3017
BseMI GCAATG 4 cut(s) 518, 1428, 1847, 2166
BseMII CTCAG 3 cut(s) 1653, 2931, 3452
BseNI ACTGG 5 cut(s) 957, 1090, 1370, 2282, 3497
BseRI GAGGAG 2 cut(s) 2378, 3249
BsgI GTGCAG 1 cut(s) 3079
Bsh1236I CGCG 1 cut(s) 2445
BshNI GGYRCC 1 cut(s) 308
BsiHKAI GWGCWC 1 cut(s) 1679
BsiHKCI CYCGRG 2 cut(s) 136, 2247
BsiSI CCGG 5 cut(s) 908, 1672, 2261, 2548, 3078
BsiWI CGTACG 1 cut(s) 2145
BslFI GGGAC 3 cut(s) 963, 995, 1814
BslI CCNNNNNNNGG 5 cut(s) 593, 978, 1928, 2547, 3017
BsmAI GTCTC 6 cut(s) 166, 1184, 1768, 2250, 2936, 3514
BsmFI GGGAC 3 cut(s) 963, 995, 1814
BsmI GAATGC 2 cut(s) 2161, 3343
Bso31I GGTCTC 1 cut(s) 2936
BsoBI CYCGRG 2 cut(s) 136, 2247
Bsp1286I GDGCHC 1 cut(s) 1679
Bsp1407I TGTACA 1 cut(s) 3354
BspACI CCGC 8 cut(s) 29, 343, 385, 701, 1838, 2445, 2966, 3193
BspCNI CTCAG 3 cut(s) 1654, 2932, 3451
BspFNI CGCG 1 cut(s) 2445
BspHI TCATGA 1 cut(s) 882
BspMAI CTGCAG 4 cut(s) 277, 1179, 1501, 3298
BspPI GGATC 6 cut(s) 1849, 1862, 1913, 2348, 2535, 3579
BspT107I GGYRCC 1 cut(s) 308
BspTNI GGTCTC 1 cut(s) 2936
BsrDI GCAATG 4 cut(s) 518, 1428, 1847, 2166
BsrFI RCCGGY 1 cut(s) 2547
BsrGI TGTACA 1 cut(s) 3354
BsrI ACTGG 5 cut(s) 957, 1090, 1370, 2282, 3497
BssAI RCCGGY 1 cut(s) 2547
BssECI CCNNGG 4 cut(s) 586, 972, 2370, 3030
BssNI GRCGYC 2 cut(s) 101, 309
BssSI CACGAG 1 cut(s) 2730
Bst2BI CACGAG 1 cut(s) 2730
Bst2UI CCWGG 7 cut(s) 588, 1091, 2198, 2372, 2589, 2919, 3031
Bst6I CTCTTC 1 cut(s) 1574
BstACI GRCGYC 2 cut(s) 101, 309
BstAUI TGTACA 1 cut(s) 3354
BstBAI YACGTR 4 cut(s) 421, 1658, 2145, 2897
BstC8I GCNNGC 3 cut(s) 1182, 1464, 3466
BstDEI CTNAG 5 cut(s) 157, 1662, 2940, 3386, 3438
BstDSI CCRYGG 1 cut(s) 972
BstFNI CGCG 1 cut(s) 2445
BstH2I RGCGCY 1 cut(s) 312
BstHHI GCGC 4 cut(s) 311, 1615, 2445, 2949
BstMAI GTCTC 6 cut(s) 166, 1184, 1768, 2250, 2936, 3514
BstNI CCWGG 7 cut(s) 588, 1091, 2198, 2372, 2589, 2919, 3031
BstNSI RCATGY 2 cut(s) 2512, 3485
BstSCI CCNGG 8 cut(s) 586, 1089, 2196, 2259, 2370, 2587, 2917, 3029
BstSFI CTRYAG 6 cut(s) 273, 1175, 1497, 1908, 3087, 3294
BstSNI TACGTA 2 cut(s) 421, 1658
BstUI CGCG 1 cut(s) 2445
BstV2I GAAGAC 3 cut(s) 36, 309, 1870
BstX2I RGATCY 3 cut(s) 862, 1854, 3571
BstXI CCANNNNNNTGG 1 cut(s) 356
BstYI RGATCY 3 cut(s) 862, 1854, 3571
BsuI GTATCC 1 cut(s) 2666
BtgI CCRYGG 1 cut(s) 972
BtrI CACGTC 1 cut(s) 315
BtsI GCAGTG 2 cut(s) 1124, 1721
BtsIMutI CAGTG 7 cut(s) 762, 1124, 1721, 3063, 3075, 3461, 3522
Cac8I GCNNGC 3 cut(s) 1182, 1464, 3466
CaiI CAGNNNCTG 1 cut(s) 593
CciI TCATGA 1 cut(s) 882
CfoI GCGC 4 cut(s) 311, 1615, 2445, 2949
Cfr10I RCCGGY 1 cut(s) 2547
CseI GACGC 1 cut(s) 2909
DdeI CTNAG 5 cut(s) 157, 1662, 2940, 3386, 3438
DinI GGCGCC 1 cut(s) 310
DriI GACNNNNNGTC 1 cut(s) 1136
EaeI YGGCCR 1 cut(s) 187
Eam1104I CTCTTC 1 cut(s) 1574
Eam1105I GACNNNNNGTC 1 cut(s) 1136
EarI CTCTTC 1 cut(s) 1574
Eco105I TACGTA 2 cut(s) 421, 1658
Eco147I AGGCCT 2 cut(s) 2587, 3371
Eco31I GGTCTC 1 cut(s) 2936
Eco32I GATATC 2 cut(s) 1080, 2705
Eco47I GGWCC 6 cut(s) 340, 800, 905, 1049, 1801, 2433
Eco57I CTGAAG 5 cut(s) 72, 399, 1437, 1506, 2582
Eco88I CYCGRG 2 cut(s) 136, 2247
EcoO109I RGGNCCY 2 cut(s) 581, 1250
EcoRI GAATTC 1 cut(s) 1120
EcoRII CCWGG 7 cut(s) 586, 1089, 2196, 2370, 2587, 2917, 3029
EcoRV GATATC 2 cut(s) 1080, 2705
EgeI GGCGCC 1 cut(s) 310
EheI GGCGCC 1 cut(s) 310
FaqI GGGAC 3 cut(s) 963, 995, 1814
FauI CCCGC 1 cut(s) 36
FauNDI CATATG 1 cut(s) 1761
FbaI TGATCA 2 cut(s) 1890, 3375
FblI GTMKAC 1 cut(s) 1596
FspBI CTAG 6 cut(s) 116, 783, 1512, 2180, 3314, 3461
GlaI GCGC 4 cut(s) 310, 1614, 2444, 2948
GsuI CTGGAG 4 cut(s) 266, 2808, 2822, 2940
HaeII RGCGCY 1 cut(s) 312
HapII CCGG 5 cut(s) 908, 1672, 2261, 2548, 3078
HgaI GACGC 1 cut(s) 2909
HhaI GCGC 4 cut(s) 311, 1615, 2445, 2949
Hin1I GRCGYC 2 cut(s) 101, 309
Hin6I GCGC 4 cut(s) 309, 1613, 2443, 2947
HinP1I GCGC 4 cut(s) 309, 1613, 2443, 2947
HincII GTYRAC 4 cut(s) 728, 1528, 2506, 2886
HindII GTYRAC 4 cut(s) 728, 1528, 2506, 2886
HindIII AAGCTT 3 cut(s) 414, 957, 1548
HinfI GANTC 4 cut(s) 1023, 2465, 2789, 3404
HpaI GTTAAC 1 cut(s) 1528
HpaII CCGG 5 cut(s) 908, 1672, 2261, 2548, 3078
HphI GGTGA 5 cut(s) 429, 1466, 1858, 2127, 2683
Hpy166II GTNNAC 9 cut(s) 728, 1010, 1141, 1528, 1597, 2506, 2800, 2886, 3073
Hpy8I GTNNAC 9 cut(s) 728, 1010, 1141, 1528, 1597, 2506, 2800, 2886, 3073
Hpy99I CGWCG 2 cut(s) 77, 1648
HpyF3I CTNAG 5 cut(s) 157, 1662, 2940, 3386, 3438
Hsp92I GRCGYC 2 cut(s) 101, 309
HspAI GCGC 4 cut(s) 309, 1613, 2443, 2947
KasI GGCGCC 1 cut(s) 308
Ksp22I TGATCA 2 cut(s) 1890, 3375
KspAI GTTAAC 1 cut(s) 1528
LmnI GCTCC 8 cut(s) 68, 1674, 1706, 2003, 2193, 2817, 2872, 3584
LweI GCATC 9 cut(s) 354, 443, 526, 1029, 1656, 2697, 3016, 3118, 3132
MaeI CTAG 6 cut(s) 116, 783, 1512, 2180, 3314, 3461
MfeI CAATTG 1 cut(s) 3042
MflI RGATCY 3 cut(s) 862, 1854, 3571
MhlI GDGCHC 1 cut(s) 1679
MlsI TGGCCA 1 cut(s) 189
MluNI TGGCCA 1 cut(s) 189
Mly113I GGCGCC 1 cut(s) 309
MlyI GAGTC 2 cut(s) 1032, 2798
MmeI TCCRAC 8 cut(s) 337, 395, 778, 1027, 2171, 2890, 3261, 3449
Mox20I TGGCCA 1 cut(s) 189
MscI TGGCCA 1 cut(s) 189
MseI TTAA 6 cut(s) 264, 470, 1163, 1476, 1527, 3321
MslI CAYNNNNRTG 4 cut(s) 464, 1886, 2999, 3536
Msp20I TGGCCA 1 cut(s) 189
MspI CCGG 5 cut(s) 908, 1672, 2261, 2548, 3078
MspR9I CCNGG 8 cut(s) 588, 1091, 2198, 2261, 2372, 2589, 2919, 3031
MunI CAATTG 1 cut(s) 3042
Mva1269I GAATGC 2 cut(s) 2161, 3343
MvaI CCWGG 7 cut(s) 588, 1091, 2198, 2372, 2589, 2919, 3031
MvnI CGCG 1 cut(s) 2445
NarI GGCGCC 1 cut(s) 309
NciI CCSGG 1 cut(s) 2261
NdeI CATATG 1 cut(s) 1761
NmuCI GTSAC 3 cut(s) 1024, 1336, 2897
NspI RCATGY 2 cut(s) 2512, 3485
PaeR7I CTCGAG 2 cut(s) 136, 2247
PagI TCATGA 1 cut(s) 882
PceI AGGCCT 2 cut(s) 2587, 3371
PciI ACATGT 1 cut(s) 3481
PctI GAATGC 2 cut(s) 2161, 3343
PfeI GAWTC 2 cut(s) 2465, 3404
Pfl23II CGTACG 1 cut(s) 2145
PflMI CCANNNNNTGG 1 cut(s) 593
PfoI TCCNGGA 1 cut(s) 2259
PleI GAGTC 2 cut(s) 1031, 2797
PluTI GGCGCC 1 cut(s) 312
PpsI GAGTC 2 cut(s) 1031, 2797
Ppu21I YACGTR 4 cut(s) 421, 1658, 2145, 2897
PscI ACATGT 1 cut(s) 3481
PshBI ATTAAT 2 cut(s) 264, 1163
Psp1406I AACGTT 1 cut(s) 767
Psp6I CCWGG 7 cut(s) 586, 1089, 2196, 2370, 2587, 2917, 3029
PspGI CCWGG 7 cut(s) 586, 1089, 2196, 2370, 2587, 2917, 3029
PspLI CGTACG 1 cut(s) 2145
PstI CTGCAG 4 cut(s) 277, 1179, 1501, 3298
PstNI CAGNNNCTG 1 cut(s) 593
PsuI RGATCY 3 cut(s) 862, 1854, 3571
RseI CAYNNNNRTG 4 cut(s) 464, 1886, 2999, 3536
SaqAI TTAA 6 cut(s) 264, 470, 1163, 1476, 1527, 3321
ScaI AGTACT 2 cut(s) 1062, 3391
SchI GAGTC 2 cut(s) 1032, 2798
ScrFI CCNGG 8 cut(s) 588, 1091, 2198, 2261, 2372, 2589, 2919, 3031
SduI GDGCHC 1 cut(s) 1679
SfaNI GCATC 9 cut(s) 354, 443, 526, 1029, 1656, 2697, 3016, 3118, 3132
SfcI CTRYAG 6 cut(s) 273, 1175, 1497, 1908, 3087, 3294
SfiI GGCCNNNNNGGCC 1 cut(s) 3189
SfoI GGCGCC 1 cut(s) 310
Sfr274I CTCGAG 2 cut(s) 136, 2247
SinI GGWCC 6 cut(s) 340, 800, 905, 1049, 1801, 2433
SlaI CTCGAG 2 cut(s) 136, 2247
SmiMI CAYNNNNRTG 4 cut(s) 464, 1886, 2999, 3536
SmlI CTYRAG 9 cut(s) 136, 218, 257, 329, 335, 938, 1268, 2247, 2360
SmoI CTYRAG 9 cut(s) 136, 218, 257, 329, 335, 938, 1268, 2247, 2360
SnaBI TACGTA 2 cut(s) 421, 1658
SseBI AGGCCT 2 cut(s) 2587, 3371
SsiI CCGC 8 cut(s) 29, 343, 385, 701, 1838, 2445, 2966, 3193
SspDI GGCGCC 1 cut(s) 308
SspI AATATT 2 cut(s) 853, 3434
SspMI CTAG 6 cut(s) 116, 783, 1512, 2180, 3314, 3461
StuI AGGCCT 2 cut(s) 2587, 3371
StyD4I CCNGG 8 cut(s) 586, 1089, 2196, 2259, 2370, 2587, 2917, 3029
TaqI TCGA 9 cut(s) 9, 137, 390, 1444, 1993, 2248, 2832, 3126, 3213
TatI WGTACW 5 cut(s) 1060, 1281, 1954, 3354, 3389
TauI GCSGC 1 cut(s) 3195
TfiI GAWTC 2 cut(s) 2465, 3404
Tru1I TTAA 6 cut(s) 264, 470, 1163, 1476, 1527, 3321
Tru9I TTAA 6 cut(s) 264, 470, 1163, 1476, 1527, 3321
TscAI CASTG 7 cut(s) 762, 1131, 1728, 3063, 3075, 3461, 3522
TseFI GTSAC 3 cut(s) 1024, 1336, 2897
Tsp45I GTSAC 3 cut(s) 1024, 1336, 2897
TspGWI ACGGA 3 cut(s) 690, 1167, 2163
TspRI CASTG 7 cut(s) 762, 1131, 1728, 3063, 3075, 3461, 3522
Van91I CCANNNNNTGG 1 cut(s) 593
VpaK11BI GGWCC 6 cut(s) 340, 800, 905, 1049, 1801, 2433
VspI ATTAAT 2 cut(s) 264, 1163
XapI RAATTY 8 cut(s) 365, 394, 1120, 1409, 1566, 1695, 2174, 2556
XbaI TCTAGA 1 cut(s) 115
XceI RCATGY 2 cut(s) 2512, 3485
XcmI CCANNNNNNNNNTGG 4 cut(s) 539, 610, 2392, 2998
XhoI CTCGAG 2 cut(s) 136, 2247
XmiI GTMKAC 1 cut(s) 1596
XspI CTAG 6 cut(s) 116, 783, 1512, 2180, 3314, 3461
ZraI GACGTC 1 cut(s) 102
ZrmI AGTACT 2 cut(s) 1062, 3391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.