RchiOBHm_Chr6g0298871
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000493
Physical Location & Seq
Forward (+)
60116259 .. 60120671
4413 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26833

Sequence Viewer

Length: 2511 bp
ATGGATAGAGTTGGACTTGAATTTCCAACAACTGAGGTGCGGTTTGACCATTTAAGTGTCGAAGCAGAAGCTTATGTAGGGAGTAGGGCATTACCTACAATGCTCAACTTCTCCATTAACATCTTAGAGGGGTTGTTGAATTACCTTCATGTTCTTCCAAGTAGAAAGAAGCGATTGCCAATCCTTCACGGTGTTAGTGGAATTATCAAGCCAAGAAGAATGACACTGCTTTTAGGCCCTCCAAGCTCTGGAAAGACCACATTACTACTGGCTTTGGCTGGAAAACTCGGTAAAGATCTGAAACTTTCGGGGAGAGTTACATACAATGGAGAGGGGATGGAAGAGTTTGTACCAGAGAGGACATCAGCATATATTAGTCAACATGATCTTCACATACCAGAGATGACAGTGAGAGAAACTCTGGCTTTTTCAGCAAGATGTCAAGGAGTCGGACCACGTTATGAAATGTTGGTAGAATTATCAAGGAGAGAAAAGACTGCAAATATAATGCCAGATCCTGATCTTGATGTTTACATGAAGGCAGCTGCACTAGAAGGACAGGAAACCAATGTAATTACAGATTATATACTCAAGGTTTTGGGGCTTGAAGTTTGTGCTGACACTATAGTAGGGGATCAAATGAGACGAGGTATCTCTGGGGGACAAAGAAAGCGACTCACCACAGGGGAGATGCTGGTTGGACCAGCAAGAGCACTTTTTATGGATGAGATATCCACTGGCTTGGACAGTTCAACAACATTTCAGATAGTGAAGTCACTTAGACAATCCATCCACATTCTCAATGGAACTGCTGTCATCTCTCTCCTCCAGCCAGCGCCAGAAACTTATGATCTTTTTGATGATATAATTCTACTCTCACATGGGCACATTGTGTATCAAGGTCCCCGGGACAATGTGCTTGAGTTCTTTGAGTACATGGGCTTTAAATGTCCAGAGAGAAAAGGAGTTGCTGATTTTCTACAAGAAGTAAACTCAGGGAAAGATCAAGAGCAATACTGGGCTGATAAAGATAAGCCTTATAGCTTTGTAACTTCCAACAACTTTGCTGAAGCCTTGCAATCATTTTACATTGGTCGAGAACTTGGTGATGAGCTTTCTATTCCGTTTGACAAGTCTAAAGGTCATCCTGCAGCTTTAACAACCAAGAAGTATGGCGTCAGCAAGAAGGAATTATTCAAAGCTTGTATGTCTAGGCAAATTTTGCTTATGAAGAGGAATTCATTTATCCACATTTTCAAAATTTCACAGATGATTCTATTATCTTGTGTAACAATAACATTATTCCTACGAACTGAGATGCACCGAGATACTGTTGAAGATGGTGGGATATATATGGGAGCATTGTTTTACTCAATGATGATAATTATGTTCAATGGGTTCTCAGAGCTTGCTATGACTGTCATGAAGCTTCCTGTGTTTTTCAAGCAAAGGGACCTTCTCTTCTATCCTGCTTGGGCGTACTCTTTGCCCACATGGCTGATAAGGATCCCTATGACTTTTGTGGAAGTTTCCATTTGGGTGACCATTACGTACTACACTATAGGTTTTGATCCAAACATTGAAAGGTTCTTCAAACAGTTCCTTTCACTGCTGTTTATTAGCCAAATGGCAACTGGACTGTTCCGACTGATAGGGGCATTAGGAAGAAACATGATTGTTGCAAACACATTTGGATCGGTTGCTTTGCTTGTGCTGTTTGTTCTTGGTGGATTCCTTTTATCACGAGAGGATATGAAAAGCTGGTTGGTGTGGGGATATTATCTGTCACCAATGTCGTATGGACTGAATGCCCTGGCTGTCAATGAATTTCTTGGAAAAAGTTGGAGACATGTTTCTACCAACTCAAAAGAACCATTAGGAATAATGGTCTTGAATTCTCGAGGGGTGTTCCCAGAAGCACGTTGGTACTGGATTGGAGTAGTAGCTTTATTTGGATTTATTCTTCTATTCAACTTCCTTTTCATTTTGGCACTTCAGTATCTTGAACCTCTTGATAAGCCTCAGGCAGTACTTTCCAAAGAGGCCTTGGCAAAGAAACAAGGCACTGAAACTGGAGAGGCCATTGAATTATTGTCAACAGGAAAGAGCTATATTGGTGCAGCTAATGAAAGACTAGACAATGTGTCAGTCAATCTTACTGGCCAGCGAGGAATGGTTCTTCCTTTTGAACCCCTCACAATTACATTTGATGAAATCAGATATGCAGTTGACATGCCACAGGAAATGAAAGCTCAAGGCATAACAGAGAATCGGTTAGAACTTCTGAAGGGTGTAAGTGGTGCTTTTAGGCCTGGAGTCCTAACAGCTCTAATGGGGGTCAGTGGCGCTGGAAAGACTACTCTAATGGATGTCTTGGCAGGAAGGAAAACTGGTGGACATATTGAAGGAAACATTACAATTTCTGGCTATCCAAAGAAGCAAGAAACATTTGCTCGTATATCTGGATATTGTGAGCAAACGGATATACACTCCACATGTTACAGTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

836

Amino Acids

93.63

Weight (kDa)

7.61

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 62 - 243 5.7e-15 ABC transporter
ABC2_membrane_7 PF19055 277 - 333 3.7e-06 ABC-2 type transporter
ABC2_membrane PF01061 398 - 610 3.2e-49 ABC-2 type transporter
PDR_assoc PF08370 615 - 677 1.1e-27 Plant PDR ABC transporter associated
ABC_tran PF00005 762 - 827 1.3e-07 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 248
AciI CCGC 1 cut(s) 40
AclWI GGATC 6 cut(s) 509, 642, 1501, 1514, 1565, 1702
AcoI YGGCCR 1 cut(s) 2161
AcsI RAATTY 6 cut(s) 20, 1218, 1237, 1260, 1826, 1894
AcuI CTGAAG 3 cut(s) 1089, 1979, 2306
AcyI GRCGYC 1 cut(s) 1176
AdeI CACNNNGTG 1 cut(s) 892
AfaI GTAC 6 cut(s) 351, 935, 1481, 1553, 1928, 2031
AfiI CCNNNNNNNGG 1 cut(s) 248
AflIII ACRYGT 2 cut(s) 1849, 2495
AhdI GACNNNNNGTC 1 cut(s) 2143
AjnI CCWGG 2 cut(s) 1812, 2311
AjuI GAANNNNNNNTTGG 2 cut(s) 1748, 1780
Alw21I GWGCWC 1 cut(s) 715
Alw26I GTCTC 2 cut(s) 637, 1840
AlwI GGATC 6 cut(s) 509, 642, 1501, 1514, 1565, 1702
AlwNI CAGNNNCTG 1 cut(s) 518
Ama87I CYCGRG 2 cut(s) 906, 1899
AoxI GGCC 5 cut(s) 235, 2043, 2079, 2161, 2309
ApeKI GCWGC 4 cut(s) 542, 545, 1151, 2120
ApoI RAATTY 6 cut(s) 20, 1218, 1237, 1260, 1826, 1894
AspLEI GCGC 2 cut(s) 838, 2348
AspS9I GGNCC 5 cut(s) 236, 452, 701, 902, 1453
AsuC2I CCSGG 2 cut(s) 907, 908
AsuHPI GGTGA 4 cut(s) 670, 1118, 1552, 1779
AvaI CYCGRG 2 cut(s) 906, 1899
AvaII GGWCC 4 cut(s) 452, 701, 902, 1453
AxyI CCTNAGG 1 cut(s) 2022
BaeGI GKGCMC 1 cut(s) 888
BaeI ACNNNNGTAYC 2 cut(s) 1982, 2015
BalI TGGCCA 1 cut(s) 2163
BamHI GGATCC 1 cut(s) 1506
BarI GAAGNNNNNNTAC 2 cut(s) 333, 365
BauI CACGAG 1 cut(s) 1743
Bbv12I GWGCWC 1 cut(s) 715
BbvI GCAGC 4 cut(s) 532, 554, 1163, 2132
BccI CCATC 3 cut(s) 331, 797, 1334
BciT130I CCWGG 2 cut(s) 1814, 2313
BcnI CCSGG 2 cut(s) 907, 908
BcoDI GTCTC 2 cut(s) 637, 1840
BfaI CTAG 3 cut(s) 551, 1212, 2135
BfmI CTRYAG 3 cut(s) 624, 1149, 1560
BfoI RGCGCY 2 cut(s) 839, 2349
BglI GCCNNNNNGGC 1 cut(s) 1495
BglII AGATCT 1 cut(s) 295
BisI GCNGC 4 cut(s) 543, 546, 1152, 2121
BlsI GCNGC 4 cut(s) 544, 547, 1153, 2122
BmcAI AGTACT 1 cut(s) 2031
Bme1390I CCNGG 4 cut(s) 907, 908, 1814, 2313
Bme18I GGWCC 4 cut(s) 452, 701, 902, 1453
BmeRI GACNNNNNGTC 1 cut(s) 2143
BmeT110I CYCGRG 2 cut(s) 906, 1899
BmgT120I GGNCC 5 cut(s) 236, 452, 701, 902, 1453
BmiI GGNNCC 3 cut(s) 904, 1454, 1508
BmrFI CCNGG 4 cut(s) 907, 908, 1814, 2313
BmrI ACTGGG 1 cut(s) 1027
BmsI GCATC 2 cut(s) 681, 1308
BmuI ACTGGG 1 cut(s) 1027
BplI GAGNNNNNCTC 2 cut(s) 403, 435
BpmI CTGGAG 3 cut(s) 812, 2094, 2334
BpuEI CTTGAG 3 cut(s) 575, 941, 2238
BpuMI CCSGG 2 cut(s) 907, 908
BsaAI YACGTR 1 cut(s) 1551
BsaBI GATNNNNATC 2 cut(s) 519, 1505
BsaHI GRCGYC 1 cut(s) 1176
BsaJI CCNNGG 4 cut(s) 905, 906, 1812, 2046
Bsc4I CCNNNNNNNGG 1 cut(s) 248
Bse1I ACTGG 8 cut(s) 273, 742, 1022, 1639, 1934, 2077, 2164, 2395
Bse21I CCTNAGG 1 cut(s) 2022
Bse8I GATNNNNATC 2 cut(s) 519, 1505
BseBI CCWGG 2 cut(s) 1814, 2313
BseDI CCNNGG 4 cut(s) 905, 906, 1812, 2046
BseGI GGATG 5 cut(s) 342, 730, 789, 1144, 2374
BseJI GATNNNNATC 2 cut(s) 519, 1505
BseLI CCNNNNNNNGG 1 cut(s) 248
BseMII CTCAG 5 cut(s) 24, 1008, 1305, 1416, 2036
BseNI ACTGG 8 cut(s) 273, 742, 1022, 1639, 1934, 2077, 2164, 2395
BseRI GAGGAG 1 cut(s) 815
BseSI GKGCMC 1 cut(s) 888
BseXI GCAGC 4 cut(s) 532, 554, 1163, 2132
BsgI GTGCAG 2 cut(s) 531, 2139
BshFI GGCC 5 cut(s) 237, 2045, 2081, 2163, 2311
BsiHKAI GWGCWC 1 cut(s) 715
BsiHKCI CYCGRG 2 cut(s) 906, 1899
BsiSI CCGG 1 cut(s) 907
BslFI GGGAC 4 cut(s) 675, 888, 923, 1466
BslI CCNNNNNNNGG 1 cut(s) 248
BsmAI GTCTC 2 cut(s) 637, 1840
BsmBI CGTCTC 1 cut(s) 637
BsmFI GGGAC 4 cut(s) 675, 888, 923, 1466
BsmI GAATGC 1 cut(s) 1813
BsnI GGCC 5 cut(s) 237, 2045, 2081, 2163, 2311
BsoBI CYCGRG 2 cut(s) 906, 1899
Bsp1286I GDGCHC 2 cut(s) 715, 888
BspACI CCGC 1 cut(s) 40
BspANI GGCC 5 cut(s) 237, 2045, 2081, 2163, 2311
BspCNI CTCAG 5 cut(s) 25, 1007, 1306, 1415, 2035
BspHI TCATGA 1 cut(s) 1422
BspLI GGNNCC 3 cut(s) 904, 1454, 1508
BspMAI CTGCAG 1 cut(s) 1153
BspPI GGATC 6 cut(s) 509, 642, 1501, 1514, 1565, 1702
BsrI ACTGG 8 cut(s) 273, 742, 1022, 1639, 1934, 2077, 2164, 2395
BssECI CCNNGG 4 cut(s) 905, 906, 1812, 2046
BssNI GRCGYC 1 cut(s) 1176
BssSI CACGAG 1 cut(s) 1743
BssT1I CCWWGG 1 cut(s) 2046
Bst2BI CACGAG 1 cut(s) 1743
Bst2UI CCWGG 2 cut(s) 1814, 2313
Bst4CI ACNGT 8 cut(s) 191, 409, 749, 1333, 1420, 1599, 1641, 2504
Bst6I CTCTTC 3 cut(s) 336, 1226, 1466
BstACI GRCGYC 1 cut(s) 1176
BstAPI GCANNNNNTGC 1 cut(s) 1222
BstBAI YACGTR 1 cut(s) 1551
BstC8I GCNNGC 3 cut(s) 834, 1410, 2165
BstDEI CTNAG 7 cut(s) 33, 124, 779, 994, 1314, 1402, 2022
BstEII GGTNACC 1 cut(s) 1540
BstF5I GGATG 5 cut(s) 342, 730, 789, 1144, 2374
BstH2I RGCGCY 2 cut(s) 839, 2349
BstHHI GCGC 2 cut(s) 838, 2348
BstMAI GTCTC 2 cut(s) 637, 1840
BstMWI GCNNNNNNNGC 4 cut(s) 243, 431, 1222, 1495
BstNI CCWGG 2 cut(s) 1814, 2313
BstNSI RCATGY 3 cut(s) 1853, 2236, 2499
BstPI GGTNACC 1 cut(s) 1540
BstSCI CCNGG 4 cut(s) 905, 906, 1812, 2311
BstSFI CTRYAG 3 cut(s) 624, 1149, 1560
BstSLI GKGCMC 1 cut(s) 888
BstSNI TACGTA 1 cut(s) 1551
BstV1I GCAGC 4 cut(s) 532, 554, 1163, 2132
BstX2I RGATCY 3 cut(s) 295, 514, 1506
BstXI CCANNNNNNTGG 1 cut(s) 742
BstYI RGATCY 3 cut(s) 295, 514, 1506
Bsu36I CCTNAGG 1 cut(s) 2022
BsuRI GGCC 5 cut(s) 237, 2045, 2081, 2163, 2311
BtsCI GGATG 5 cut(s) 342, 730, 789, 1144, 2374
BtsI GCAGTG 2 cut(s) 224, 1607
BtsIMutI CAGTG 6 cut(s) 224, 414, 735, 1607, 2064, 2347
Cac8I GCNNGC 3 cut(s) 834, 1410, 2165
CaiI CAGNNNCTG 1 cut(s) 518
CciI TCATGA 1 cut(s) 1422
CfoI GCGC 2 cut(s) 838, 2348
Cfr13I GGNCC 5 cut(s) 236, 452, 701, 902, 1453
Cfr9I CCCGGG 1 cut(s) 906
CseI GACGC 1 cut(s) 1165
Csp6I GTAC 6 cut(s) 350, 934, 1480, 1552, 1927, 2030
CviQI GTAC 6 cut(s) 350, 934, 1480, 1552, 1927, 2030
DdeI CTNAG 7 cut(s) 33, 124, 779, 994, 1314, 1402, 2022
DraI TTTAAA 1 cut(s) 946
DraIII CACNNNGTG 1 cut(s) 892
DriI GACNNNNNGTC 1 cut(s) 2143
EaeI YGGCCR 1 cut(s) 2161
Eam1104I CTCTTC 3 cut(s) 336, 1226, 1466
Eam1105I GACNNNNNGTC 1 cut(s) 2143
EarI CTCTTC 3 cut(s) 336, 1226, 1466
Eco105I TACGTA 1 cut(s) 1551
Eco130I CCWWGG 1 cut(s) 2046
Eco147I AGGCCT 2 cut(s) 2045, 2311
Eco32I GATATC 1 cut(s) 732
Eco47I GGWCC 4 cut(s) 452, 701, 902, 1453
Eco57I CTGAAG 3 cut(s) 1089, 1979, 2306
Eco81I CCTNAGG 1 cut(s) 2022
Eco88I CYCGRG 2 cut(s) 906, 1899
Eco91I GGTNACC 1 cut(s) 1540
EcoO109I RGGNCCY 3 cut(s) 236, 902, 1453
EcoO65I GGTNACC 1 cut(s) 1540
EcoRI GAATTC 2 cut(s) 1237, 1894
EcoRII CCWGG 2 cut(s) 1812, 2311
EcoRV GATATC 1 cut(s) 732
EcoT14I CCWWGG 1 cut(s) 2046
ErhI CCWWGG 1 cut(s) 2046
Esp3I CGTCTC 1 cut(s) 637
FalI AAGNNNNNCTT 2 cut(s) 2287, 2319
FaqI GGGAC 4 cut(s) 675, 888, 923, 1466
Fnu4HI GCNGC 4 cut(s) 543, 546, 1152, 2121
FokI GGATG 5 cut(s) 349, 737, 776, 1131, 2381
Fsp4HI GCNGC 4 cut(s) 543, 546, 1152, 2121
FspBI CTAG 3 cut(s) 551, 1212, 2135
GlaI GCGC 2 cut(s) 837, 2347
GluI GCNGC 4 cut(s) 543, 546, 1152, 2121
GsuI CTGGAG 3 cut(s) 812, 2094, 2334
HaeII RGCGCY 2 cut(s) 839, 2349
HaeIII GGCC 5 cut(s) 237, 2045, 2081, 2163, 2311
HapII CCGG 1 cut(s) 907
HgaI GACGC 1 cut(s) 1165
HhaI GCGC 2 cut(s) 838, 2348
Hin1I GRCGYC 1 cut(s) 1176
Hin6I GCGC 2 cut(s) 836, 2346
HinP1I GCGC 2 cut(s) 836, 2346
HincII GTYRAC 3 cut(s) 380, 2097, 2230
HindII GTYRAC 3 cut(s) 380, 2097, 2230
HindIII AAGCTT 3 cut(s) 69, 1200, 1427
HinfI GANTC 6 cut(s) 447, 675, 1273, 1731, 2269, 2316
HpaII CCGG 1 cut(s) 907
HphI GGTGA 4 cut(s) 670, 1118, 1552, 1779
Hpy166II GTNNAC 6 cut(s) 380, 532, 991, 2097, 2230, 2396
Hpy188I TCNGA 7 cut(s) 300, 452, 765, 1405, 1646, 2219, 2286
Hpy8I GTNNAC 6 cut(s) 380, 532, 991, 2097, 2230, 2396
HpyAV CCTTC 9 cut(s) 155, 194, 532, 548, 1180, 1466, 2281, 2376, 2399
HpyCH4III ACNGT 8 cut(s) 191, 409, 749, 1333, 1420, 1599, 1641, 2504
HpyCH4IV ACGT 3 cut(s) 457, 1550, 1921
HpyCH4V TGCA 8 cut(s) 500, 548, 1078, 1151, 1321, 1682, 2120, 2225
HpyF10VI GCNNNNNNNGC 4 cut(s) 243, 431, 1222, 1495
HpyF3I CTNAG 7 cut(s) 33, 124, 779, 994, 1314, 1402, 2022
HpySE526I ACGT 3 cut(s) 457, 1550, 1921
Hsp92I GRCGYC 1 cut(s) 1176
HspAI GCGC 2 cut(s) 836, 2346
LmnI GCTCC 1 cut(s) 1358
Lsp1109I GCAGC 4 cut(s) 532, 554, 1163, 2132
LweI GCATC 2 cut(s) 681, 1308
MaeI CTAG 3 cut(s) 551, 1212, 2135
MaeII ACGT 3 cut(s) 457, 1550, 1921
MaeIII GTNAC 7 cut(s) 316, 774, 1048, 1288, 1540, 1785, 2498
MflI RGATCY 3 cut(s) 295, 514, 1506
MhlI GDGCHC 2 cut(s) 715, 888
MlsI TGGCCA 1 cut(s) 2163
MluNI TGGCCA 1 cut(s) 2163
MlyI GAGTC 3 cut(s) 456, 669, 2325
MmeI TCCRAC 6 cut(s) 50, 430, 679, 1080, 1669, 1823
Mox20I TGGCCA 1 cut(s) 2163
MscI TGGCCA 1 cut(s) 2163
MseI TTAA 4 cut(s) 53, 117, 945, 1157
MslI CAYNNNNRTG 2 cut(s) 54, 1538
Msp20I TGGCCA 1 cut(s) 2163
MspA1I CMGCKG 1 cut(s) 545
MspI CCGG 1 cut(s) 907
MspR9I CCNGG 4 cut(s) 907, 908, 1814, 2313
Mva1269I GAATGC 1 cut(s) 1813
MvaI CCWGG 2 cut(s) 1814, 2313
MwoI GCNNNNNNNGC 4 cut(s) 243, 431, 1222, 1495
NciI CCSGG 2 cut(s) 907, 908
NlaIV GGNNCC 3 cut(s) 904, 1454, 1508
NmuCI GTSAC 3 cut(s) 774, 1540, 1785
NspI RCATGY 3 cut(s) 1853, 2236, 2499
PaeR7I CTCGAG 1 cut(s) 1899
PagI TCATGA 1 cut(s) 1422
PceI AGGCCT 2 cut(s) 2045, 2311
PciI ACATGT 2 cut(s) 1849, 2495
PctI GAATGC 1 cut(s) 1813
PfeI GAWTC 3 cut(s) 1273, 1731, 2269
PflMI CCANNNNNTGG 1 cut(s) 248
PkrI GCNGC 4 cut(s) 544, 547, 1153, 2122
PleI GAGTC 3 cut(s) 455, 669, 2324
PpsI GAGTC 3 cut(s) 455, 669, 2324
Ppu21I YACGTR 1 cut(s) 1551
PpuMI RGGWCCY 2 cut(s) 902, 1453
PscI ACATGT 2 cut(s) 1849, 2495
Psp5II RGGWCCY 2 cut(s) 902, 1453
Psp6I CCWGG 2 cut(s) 1812, 2311
PspEI GGTNACC 1 cut(s) 1540
PspGI CCWGG 2 cut(s) 1812, 2311
PspN4I GGNNCC 3 cut(s) 904, 1454, 1508
PspPI GGNCC 5 cut(s) 236, 452, 701, 902, 1453
PspPPI RGGWCCY 2 cut(s) 902, 1453
PstI CTGCAG 1 cut(s) 1153
PstNI CAGNNNCTG 1 cut(s) 518
PsuI RGATCY 3 cut(s) 295, 514, 1506
PvuII CAGCTG 1 cut(s) 545
RsaI GTAC 6 cut(s) 351, 935, 1481, 1553, 1928, 2031
RsaNI GTAC 6 cut(s) 350, 934, 1480, 1552, 1927, 2030
RseI CAYNNNNRTG 2 cut(s) 54, 1538
SaqAI TTAA 4 cut(s) 53, 117, 945, 1157
SatI GCNGC 4 cut(s) 543, 546, 1152, 2121
Sau96I GGNCC 5 cut(s) 236, 452, 701, 902, 1453
ScaI AGTACT 1 cut(s) 2031
SchI GAGTC 3 cut(s) 456, 669, 2325
ScrFI CCNGG 4 cut(s) 907, 908, 1814, 2313
SduI GDGCHC 2 cut(s) 715, 888
SfaNI GCATC 2 cut(s) 681, 1308
SfcI CTRYAG 3 cut(s) 624, 1149, 1560
Sfr274I CTCGAG 1 cut(s) 1899
SinI GGWCC 4 cut(s) 452, 701, 902, 1453
SlaI CTCGAG 1 cut(s) 1899
SmaI CCCGGG 1 cut(s) 908
SmiMI CAYNNNNRTG 2 cut(s) 54, 1538
SmlI CTYRAG 4 cut(s) 590, 920, 1899, 2253
SmoI CTYRAG 4 cut(s) 590, 920, 1899, 2253
SnaBI TACGTA 1 cut(s) 1551
SseBI AGGCCT 2 cut(s) 2045, 2311
SsiI CCGC 1 cut(s) 40
SspMI CTAG 3 cut(s) 551, 1212, 2135
StuI AGGCCT 2 cut(s) 2045, 2311
StyD4I CCNGG 4 cut(s) 905, 906, 1812, 2311
StyI CCWWGG 1 cut(s) 2046
TaaI ACNGT 8 cut(s) 191, 409, 749, 1333, 1420, 1599, 1641, 2504
TaiI ACGT 3 cut(s) 460, 1553, 1924
TaqI TCGA 3 cut(s) 60, 1096, 1900
TatI WGTACW 2 cut(s) 933, 2029
TfiI GAWTC 3 cut(s) 1273, 1731, 2269
Tru1I TTAA 4 cut(s) 53, 117, 945, 1157
Tru9I TTAA 4 cut(s) 53, 117, 945, 1157
TscAI CASTG 6 cut(s) 231, 414, 742, 1614, 2071, 2347
TseFI GTSAC 3 cut(s) 774, 1540, 1785
TseI GCWGC 4 cut(s) 542, 545, 1151, 2120
Tsp45I GTSAC 3 cut(s) 774, 1540, 1785
TspGWI ACGGA 2 cut(s) 1113, 2495
TspMI CCCGGG 1 cut(s) 906
TspRI CASTG 6 cut(s) 231, 414, 742, 1614, 2071, 2347
Van91I CCANNNNNTGG 1 cut(s) 248
VpaK11BI GGWCC 4 cut(s) 452, 701, 902, 1453
XapI RAATTY 6 cut(s) 20, 1218, 1237, 1260, 1826, 1894
XceI RCATGY 3 cut(s) 1853, 2236, 2499
XcmI CCANNNNNNNNNTGG 5 cut(s) 265, 800, 1631, 1920, 2044
XhoI CTCGAG 1 cut(s) 1899
XmaI CCCGGG 1 cut(s) 906
XspI CTAG 3 cut(s) 551, 1212, 2135
ZrmI AGTACT 1 cut(s) 2031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.