Rh6DG396000
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
58704598 .. 58711672
7075 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG396000.1

Sequence Viewer

Length: 2799 bp
ATGTGGAGAAACGAGGATACTTCAATGGAAGCTTTCTCCAAGTCTTCTCGTGAAGAAGACGATGAAGAATCTCTCAAATGGGCTGCTATTGAGAGATTGCCTACTTATTTACGCATAAGGAGAAGTATACTCGCTGATCAAGAAGAGGGTAAAGCCAGAGAAATTGATGTCAAGGATCTTGGATTACTAGAGAGGAAGAATTTGTTGGAGAGGTTAGTGAAGATTGCTGAGGAAGATAATGAGAAATTCTTGTTCAAGCTCAGGGACCGCATGAATAGAGTTGGACTTGAATTTCCAACAACTGAAGTGCGGTTCGAGCACTTAAATGTTGAAGCAGAAGCTTATGTAGGAAGCAGGGCATTACCTACAATGTTCAACTTCTCCATTAATATGTTAGAGGGGCTCTTGAATTGTGTTCATCTTCTTCCTAGTAGAAAGAAACCTTTGCCAATCCTACATGGTGTAAGTGGAATAATCAAGCCAAGAAGAATGACACTGCTTTTAGGCCCTCCAGGCTCCGGAAAGACCACATTGCTATTGGCATTGGCTGGAAAGCTTGAAATGTTAGTAGAACTACTAAGAAGAGAGAAGGCTGCAAATATTATGCCAGATTCTGATCTTGATGTCTACATGAAGGCAGCGGCACTAAAAGGACAGGAAACCACTGTGATTACAGATTATATACTCAAGATGGCAAACGGACTGTTCCGATTGATAGGTGCATTAGGAAGGAACATGACTGTTGCAAACACATTTGGATCTGTTGCTTTACTATGCTGTTTTGTTCTGGGTGGCTTTATGTTATCACGAGCACTTGATAAGCCTCAGGCAGTATTGTCCAAAGAGGCTTTGGCAGTGACACACGCCATGAAAACTGGAGAGACCATTGAGCTATCGCCAACAGGAAACAATTCTATTGGAGTAGGGAATGAAGTTCTAGAGAATGTGTCAGCCAATCGTCCCATGCAGCAAGGAATGATTCTTCCTTTTCAACCCCTCTCAATTACGTTTACTGAAATCAGATATGCAGTTGACATGCCACAGGAAATGAAAGATCAAGGCATTACTGAGGATCGACTAGAACTGCTGAAGGGTGTGAGTGGTGCTTTCAGGCCTGGGGTCCTAACAGCTCTAATGGGTGTTAGCGGTGCTGGAAAGACTACTTTACTGGATGTCCTGGCAGGAAGGAAAACCGGTGGATATATTGAAGGAAACATTACCATTTCTGGGTATCCAAAAAAGCAAGAAACATTTGCTCGTATCTCAGGATATTGTGAGCAGACAGATATACACTCTCCACATGTTACGGTTTATGAGTCTTTGATTTATTCTGCATGGCTCCGGTTGTCCCCTGAGGTTGATTCTCCAACCAGAAAGATGTTTATTGAAGAAGTCATGGAACTTGTGGAACTGACCTCAATAAGGGAAGCACTTGTTGGATTGCCTGGAGGGAATGGTCTCTCGACTGAGCAGCGCAAAAGACTAACAATTGCAGTAGAGCTTGTTGCCAACCCATCCATAATATTTATGGATGAGCCCACCTCTGGCCTTGATGCCAGGGCAGCAGCAATTGTAATGAGAACAGTGAGGAATACAGTGGATACCGGAAGAACAGTAGTCTGCACCATCCACCAGCCAAGCATTGATATATTTGATGCTTTTGATGAGATGCTCCTTCTGAAACAGGGTGGCGAAGAAATATACGTTGGCCCTTTAGGCTACCATTCTTCCTACTTGATCGGATACTTTGAGGGAATTAGTGGAGTTTCTCAAATGAAGAATGGTTACAATCCTGCAACTTGGATGTTGGAGGTTACTTCTGCAGCTCAAGAAGCAGCTCTAGGGATTAATTTCACAGACATATACAAGAATTCAGAAGCATACAGGAGAAACAAGGCCTTGGTCAAGGAACTAAGTATTCCTCCACCGAATACAAGAGACTTGTACTTCCCAACAAAATATTCTCAGTCTTTCTATACCCAGTGCAAAGCTTGCTTATGGAAGCAACATTTGTCTTACTGGAGAAACCCGGCATACAGTGCAGTTAGACTTCTTTTCACAACATTGATAGCTTTAGCAACCGGGACATTATTCTGGGGTCTTGGCTCCAGAAGGCAAAAGCAGCAAGATCTTTTTAACGCAATGGGTGCTATGTATTCTGCTATTCTCTTCATTGGGCCACAAAATACCTCAACAGTGCAGCCAGTTGTAGGCATTGAGCGAATAGTCTTTTACAGAGAAAGGGCTGCCGGAATGTACTCTGCCTTGCCATATGCCTTTGGACAGGTTGGCATTGAGCTCCCATACACTTTGATCCAAACTATCATATATGTGGTTATATCATACACGATGATCGGATTTGAGTGGACGGTCAGCAAGTTCTTTTGGCAACTATTCTTCATATACTTCACTTACTTATACTTCACCTTATATGGCATGATGAGTGTGGCCATTACTCCCAACATTGCCGTTTCCGCTGTAGTTTCCACGGCATTCAACCCGCTATGGAACATTTTTTCAGGATTTATCATTCCCAAATCAAGAATTCCAATATGGTGGAGATGGTTCTACTGGTCGTGCCCAGTCTCTTGGAGCTTGTACGGAATGATTGGTTCGCAGTTTGGAGGCATTGAGGACAGGCTTGATTCCGGCGAAACTGTGGACGCTTTTACCAGGACTTATTTTGGGTATAGAGAAGACTTTATAAGTGTTGTTGCAATAGTGCTCGTAGCTTTTTCAGTGCTCTTTGGATCCGTCTTTGCCTTTACAATCAAAGCCTTTAACTTTCAAAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

932

Amino Acids

104.49

Weight (kDa)

7.12

Isoelectric Point (pI)

40.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 77 - 127 1.2e-07 ABC-transporter N-terminal
ABC_tran PF00005 363 - 515 7.2e-21 ABC transporter
ABC2_membrane PF01061 660 - 874 3.6e-58 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2705
AccI GTMKAC 2 cut(s) 127, 627
AccIII TCCGGA 1 cut(s) 518
AciI CCGC 6 cut(s) 268, 310, 641, 1146, 2475, 2501
AclWI GGATC 6 cut(s) 183, 766, 1080, 2308, 2745, 2758
AcoI YGGCCR 1 cut(s) 2448
AcsI RAATTY 5 cut(s) 199, 245, 290, 1870, 2544
AcuI CTGAAG 2 cut(s) 324, 1109
AfaI GTAC 3 cut(s) 1946, 2258, 2600
AfiI CCNNNNNNNGG 5 cut(s) 518, 1227, 1422, 1544, 2210
AflIII ACRYGT 1 cut(s) 1300
AgeI ACCGGT 1 cut(s) 1193
AjnI CCWGG 6 cut(s) 511, 1114, 1176, 1444, 1556, 2672
AjuI GAANNNNNNNTTGG 8 cut(s) 188, 220, 1419, 1451, 1689, 1721, 1945, 1977
Alw21I GWGCWC 5 cut(s) 321, 814, 2301, 2727, 2745
Alw26I GTCTC 4 cut(s) 875, 1463, 1932, 2590
AlwI GGATC 6 cut(s) 183, 766, 1080, 2308, 2745, 2758
AlwNI CAGNNNCTG 1 cut(s) 614
Aor13HI TCCGGA 1 cut(s) 518
AoxI GGCC 7 cut(s) 505, 1112, 1546, 1708, 1896, 2177, 2448
ApoI RAATTY 5 cut(s) 199, 245, 290, 1870, 2544
AseI ATTAAT 2 cut(s) 387, 1848
AsiGI ACCGGT 1 cut(s) 1193
Asp700I GAANNNNTTC 1 cut(s) 910
AspLEI GCGC 1 cut(s) 1476
AspS9I GGNCC 5 cut(s) 265, 506, 1120, 1709, 2177
AsuC2I CCSGG 2 cut(s) 2030, 2083
AsuHPI GGTGA 1 cut(s) 2416
AvaII GGWCC 2 cut(s) 265, 1120
AxyI CCTNAGG 2 cut(s) 825, 1353
BaeGI GKGCMC 1 cut(s) 2582
BalI TGGCCA 1 cut(s) 2450
BamHI GGATCC 1 cut(s) 2750
BanII GRGCYC 3 cut(s) 405, 1539, 2301
BarI GAAGNNNNNNTAC 2 cut(s) 1769, 1801
BauI CACGAG 2 cut(s) 48, 807
BbsI GAAGAC 3 cut(s) 36, 63, 2703
Bbv12I GWGCWC 5 cut(s) 321, 814, 2301, 2727, 2745
BbvCI CCTCAGC 1 cut(s) 228
BccI CCATC 4 cut(s) 685, 1522, 1634, 2556
BceAI ACGGC 2 cut(s) 2453, 2505
BciT130I CCWGG 6 cut(s) 513, 1116, 1178, 1446, 1558, 2674
BciVI GTATCC 4 cut(s) 10, 1242, 1594, 1736
BclI TGATCA 1 cut(s) 136
BcnI CCSGG 2 cut(s) 2030, 2083
BcoDI GTCTC 4 cut(s) 875, 1463, 1932, 2590
BfaI CTAG 5 cut(s) 188, 429, 938, 1079, 1841
BfmI CTRYAG 2 cut(s) 1821, 2478
BfuI GTATCC 4 cut(s) 10, 1242, 1594, 1736
BglI GCCNNNNNGGC 2 cut(s) 513, 1716
BglII AGATCT 1 cut(s) 2128
Bme1390I CCNGG 8 cut(s) 513, 1116, 1178, 1446, 1558, 2030, 2083, 2674
Bme18I GGWCC 2 cut(s) 265, 1120
BmgT120I GGNCC 5 cut(s) 265, 506, 1120, 1709, 2177
BmiI GGNNCC 6 cut(s) 266, 517, 1121, 1340, 2107, 2752
BmrFI CCNGG 8 cut(s) 513, 1116, 1178, 1446, 1558, 2030, 2083, 2674
BmrI ACTGGG 2 cut(s) 1975, 2576
BmsI GCATC 3 cut(s) 1543, 1645, 1659
BmuI ACTGGG 2 cut(s) 1975, 2576
BpiI GAAGAC 3 cut(s) 36, 63, 2703
BplI GAGNNNNNCTC 2 cut(s) 1526, 1558
BpmI CTGGAG 5 cut(s) 495, 897, 1467, 2041, 2092
Bpu10I CCTNAGC 2 cut(s) 228, 260
BpuEI CTTGAG 2 cut(s) 671, 1812
BpuMI CCSGG 2 cut(s) 2030, 2083
BsaBI GATNNNNATC 1 cut(s) 615
BsaI GGTCTC 2 cut(s) 875, 1463
BsaJI CCNNGG 4 cut(s) 1115, 1557, 1899, 2487
BsaWI WCCGGW 4 cut(s) 518, 1193, 1341, 1604
Bsc4I CCNNNNNNNGG 5 cut(s) 518, 1227, 1422, 1544, 2210
Bse118I RCCGGY 1 cut(s) 1193
Bse1I ACTGG 7 cut(s) 880, 1173, 1981, 2024, 2204, 2576, 2582
Bse21I CCTNAGG 2 cut(s) 825, 1353
Bse3DI GCAATG 3 cut(s) 530, 2148, 2463
Bse8I GATNNNNATC 1 cut(s) 615
BseAI TCCGGA 1 cut(s) 518
BseBI CCWGG 6 cut(s) 513, 1116, 1178, 1446, 1558, 2674
BseDI CCNNGG 4 cut(s) 1115, 1557, 1899, 2487
BseGI GGATG 5 cut(s) 1177, 1514, 1537, 1626, 1809
BseJI GATNNNNATC 1 cut(s) 615
BseLI CCNNNNNNNGG 5 cut(s) 518, 1227, 1422, 1544, 2210
BseMI GCAATG 3 cut(s) 530, 2148, 2463
BseMII CTCAG 8 cut(s) 219, 274, 839, 1059, 1278, 1344, 1458, 1979
BseNI ACTGG 7 cut(s) 880, 1173, 1981, 2024, 2204, 2576, 2582
BseSI GKGCMC 1 cut(s) 2582
BsgI GTGCAG 3 cut(s) 1606, 2061, 2219
BshFI GGCC 7 cut(s) 507, 1114, 1548, 1710, 1898, 2179, 2450
BshTI ACCGGT 1 cut(s) 1193
BsiHKAI GWGCWC 5 cut(s) 321, 814, 2301, 2727, 2745
BsiSI CCGG 8 cut(s) 519, 1194, 1342, 1605, 2030, 2082, 2250, 2649
BslFI GGGAC 4 cut(s) 278, 945, 1333, 2098
BslI CCNNNNNNNGG 5 cut(s) 518, 1227, 1422, 1544, 2210
BsmAI GTCTC 4 cut(s) 875, 1463, 1932, 2590
BsmFI GGGAC 4 cut(s) 278, 945, 1333, 2098
BsmI GAATGC 1 cut(s) 2492
BsnI GGCC 7 cut(s) 507, 1114, 1548, 1710, 1898, 2179, 2450
Bso31I GGTCTC 2 cut(s) 875, 1463
Bsp1286I GDGCHC 8 cut(s) 321, 405, 814, 1539, 2301, 2582, 2727, 2745
Bsp13I TCCGGA 1 cut(s) 518
BspACI CCGC 6 cut(s) 268, 310, 641, 1146, 2475, 2501
BspANI GGCC 7 cut(s) 507, 1114, 1548, 1710, 1898, 2179, 2450
BspCNI CTCAG 8 cut(s) 220, 273, 838, 1060, 1277, 1345, 1459, 1978
BspEI TCCGGA 1 cut(s) 518
BspLI GGNNCC 6 cut(s) 266, 517, 1121, 1340, 2107, 2752
BspMAI CTGCAG 1 cut(s) 1825
BspPI GGATC 6 cut(s) 183, 766, 1080, 2308, 2745, 2758
BspTNI GGTCTC 2 cut(s) 875, 1463
BsrDI GCAATG 3 cut(s) 530, 2148, 2463
BsrFI RCCGGY 1 cut(s) 1193
BsrI ACTGG 7 cut(s) 880, 1173, 1981, 2024, 2204, 2576, 2582
BssAI RCCGGY 1 cut(s) 1193
BssECI CCNNGG 4 cut(s) 1115, 1557, 1899, 2487
BssNAI GTATAC 1 cut(s) 128
BssSI CACGAG 2 cut(s) 48, 807
BssT1I CCWWGG 1 cut(s) 1899
Bst1107I GTATAC 1 cut(s) 128
Bst2BI CACGAG 2 cut(s) 48, 807
Bst2UI CCWGG 6 cut(s) 513, 1116, 1178, 1446, 1558, 2674
Bst6I CTCTTC 3 cut(s) 138, 577, 2174
BstAPI GCANNNNNTGC 3 cut(s) 1992, 2039, 2147
BstC8I GCNNGC 1 cut(s) 1993
BstDSI CCRYGG 1 cut(s) 2487
BstENI CCTNNNNNAGG 1 cut(s) 1420
BstF5I GGATG 5 cut(s) 1177, 1514, 1537, 1626, 1809
BstHHI GCGC 1 cut(s) 1476
BstMAI GTCTC 4 cut(s) 875, 1463, 1932, 2590
BstNI CCWGG 6 cut(s) 513, 1116, 1178, 1446, 1558, 2674
BstNSI RCATGY 2 cut(s) 1039, 1304
BstSCI CCNGG 8 cut(s) 511, 1114, 1176, 1444, 1556, 2028, 2081, 2672
BstSFI CTRYAG 2 cut(s) 1821, 2478
BstSLI GKGCMC 1 cut(s) 2582
BstV2I GAAGAC 3 cut(s) 36, 63, 2703
BstX2I RGATCY 4 cut(s) 175, 758, 2128, 2750
BstXI CCANNNNNNTGG 2 cut(s) 2556, 2589
BstYI RGATCY 4 cut(s) 175, 758, 2128, 2750
BstZ17I GTATAC 1 cut(s) 128
Bsu36I CCTNAGG 2 cut(s) 825, 1353
BsuI GTATCC 4 cut(s) 10, 1242, 1594, 1736
BsuRI GGCC 7 cut(s) 507, 1114, 1548, 1710, 1898, 2179, 2450
BtgI CCRYGG 1 cut(s) 2487
BtsCI GGATG 5 cut(s) 1177, 1514, 1537, 1626, 1809
BtsI GCAGTG 2 cut(s) 494, 861
BtsIMutI CAGTG 9 cut(s) 494, 663, 861, 1590, 1602, 1988, 2044, 2202, 2745
Cac8I GCNNGC 1 cut(s) 1993
CaiI CAGNNNCTG 1 cut(s) 614
CfoI GCGC 1 cut(s) 1476
Cfr10I RCCGGY 1 cut(s) 1193
Cfr13I GGNCC 5 cut(s) 265, 506, 1120, 1709, 2177
CseI GACGC 1 cut(s) 2672
Csp6I GTAC 3 cut(s) 1945, 2257, 2599
CspAI ACCGGT 1 cut(s) 1193
CviQI GTAC 3 cut(s) 1945, 2257, 2599
EaeI YGGCCR 1 cut(s) 2448
Eam1104I CTCTTC 3 cut(s) 138, 577, 2174
EarI CTCTTC 3 cut(s) 138, 577, 2174
Ecl136II GAGCTC 1 cut(s) 2299
Eco130I CCWWGG 1 cut(s) 1899
Eco147I AGGCCT 2 cut(s) 1114, 1898
Eco24I GRGCYC 3 cut(s) 405, 1539, 2301
Eco31I GGTCTC 2 cut(s) 875, 1463
Eco47I GGWCC 2 cut(s) 265, 1120
Eco53kI GAGCTC 1 cut(s) 2299
Eco57I CTGAAG 2 cut(s) 324, 1109
Eco81I CCTNAGG 2 cut(s) 825, 1353
EcoICRI GAGCTC 1 cut(s) 2299
EcoNI CCTNNNNNAGG 1 cut(s) 1420
EcoO109I RGGNCCY 2 cut(s) 506, 1120
EcoRI GAATTC 2 cut(s) 1870, 2544
EcoRII CCWGG 6 cut(s) 511, 1114, 1176, 1444, 1556, 2672
EcoT14I CCWWGG 1 cut(s) 1899
EcoT38I GRGCYC 3 cut(s) 405, 1539, 2301
ErhI CCWWGG 1 cut(s) 1899
FaqI GGGAC 4 cut(s) 278, 945, 1333, 2098
FauI CCCGC 1 cut(s) 2508
FauNDI CATATG 1 cut(s) 2272
FbaI TGATCA 1 cut(s) 136
FblI GTMKAC 2 cut(s) 127, 627
FokI GGATG 5 cut(s) 1184, 1501, 1544, 1613, 1816
FriOI GRGCYC 3 cut(s) 405, 1539, 2301
FspBI CTAG 5 cut(s) 188, 429, 938, 1079, 1841
GlaI GCGC 1 cut(s) 1475
GsuI CTGGAG 5 cut(s) 495, 897, 1467, 2041, 2092
HaeIII GGCC 7 cut(s) 507, 1114, 1548, 1710, 1898, 2179, 2450
HapII CCGG 8 cut(s) 519, 1194, 1342, 1605, 2030, 2082, 2250, 2649
HgaI GACGC 1 cut(s) 2672
HhaI GCGC 1 cut(s) 1476
Hin6I GCGC 1 cut(s) 1474
HinP1I GCGC 1 cut(s) 1474
HincII GTYRAC 1 cut(s) 1033
HindII GTYRAC 1 cut(s) 1033
HindIII AAGCTT 4 cut(s) 30, 339, 554, 1989
HinfI GANTC 6 cut(s) 68, 611, 979, 1316, 1361, 2645
HpaII CCGG 8 cut(s) 519, 1194, 1342, 1605, 2030, 2082, 2250, 2649
HphI GGTGA 1 cut(s) 2416
Hpy166II GTNNAC 6 cut(s) 128, 628, 1011, 1033, 2367, 2662
Hpy188I TCNGA 7 cut(s) 616, 710, 1022, 1680, 1742, 1876, 2357
Hpy8I GTNNAC 6 cut(s) 128, 628, 1011, 1033, 2367, 2662
HpyAV CCTTC 8 cut(s) 583, 628, 723, 1084, 1179, 1202, 1685, 2106
HpyCH4IV ACGT 2 cut(s) 1007, 1704
HpySE526I ACGT 2 cut(s) 1007, 1704
HspAI GCGC 1 cut(s) 1474
Kpn2I TCCGGA 1 cut(s) 518
Ksp22I TGATCA 1 cut(s) 136
LmnI GCTCC 6 cut(s) 521, 1344, 1677, 2111, 2304, 2592
LweI GCATC 3 cut(s) 1543, 1645, 1659
MaeI CTAG 5 cut(s) 188, 429, 938, 1079, 1841
MaeII ACGT 2 cut(s) 1007, 1704
MaeIII GTNAC 4 cut(s) 856, 1303, 1784, 1813
MfeI CAATTG 2 cut(s) 1488, 1569
MflI RGATCY 4 cut(s) 175, 758, 2128, 2750
MhlI GDGCHC 8 cut(s) 321, 405, 814, 1539, 2301, 2582, 2727, 2745
MlsI TGGCCA 1 cut(s) 2450
MluNI TGGCCA 1 cut(s) 2450
MlyI GAGTC 1 cut(s) 1325
MmeI TCCRAC 6 cut(s) 186, 262, 320, 1391, 1417, 1788
Mox20I TGGCCA 1 cut(s) 2450
MroI TCCGGA 1 cut(s) 518
MroXI GAANNNNTTC 1 cut(s) 910
MscI TGGCCA 1 cut(s) 2450
MseI TTAA 5 cut(s) 323, 387, 1848, 2136, 2781
MslI CAYNNNNRTG 3 cut(s) 324, 389, 2330
Msp20I TGGCCA 1 cut(s) 2450
MspA1I CMGCKG 2 cut(s) 641, 2477
MspI CCGG 8 cut(s) 519, 1194, 1342, 1605, 2030, 2082, 2250, 2649
MspR9I CCNGG 8 cut(s) 513, 1116, 1178, 1446, 1558, 2030, 2083, 2674
MunI CAATTG 2 cut(s) 1488, 1569
Mva1269I GAATGC 1 cut(s) 2492
MvaI CCWGG 6 cut(s) 513, 1116, 1178, 1446, 1558, 2674
NciI CCSGG 2 cut(s) 2030, 2083
NdeI CATATG 1 cut(s) 2272
NlaIV GGNNCC 6 cut(s) 266, 517, 1121, 1340, 2107, 2752
NmuCI GTSAC 1 cut(s) 856
NspI RCATGY 2 cut(s) 1039, 1304
PceI AGGCCT 2 cut(s) 1114, 1898
PciI ACATGT 1 cut(s) 1300
PctI GAATGC 1 cut(s) 2492
PdmI GAANNNNTTC 1 cut(s) 910
PfeI GAWTC 5 cut(s) 68, 611, 979, 1361, 2645
PinAI ACCGGT 1 cut(s) 1193
PleI GAGTC 1 cut(s) 1324
PpsI GAGTC 1 cut(s) 1324
PpuMI RGGWCCY 1 cut(s) 1120
PscI ACATGT 1 cut(s) 1300
PshBI ATTAAT 2 cut(s) 387, 1848
PsiI TTATAA 1 cut(s) 2705
Psp124BI GAGCTC 1 cut(s) 2301
Psp5II RGGWCCY 1 cut(s) 1120
Psp6I CCWGG 6 cut(s) 511, 1114, 1176, 1444, 1556, 2672
PspGI CCWGG 6 cut(s) 511, 1114, 1176, 1444, 1556, 2672
PspN4I GGNNCC 6 cut(s) 266, 517, 1121, 1340, 2107, 2752
PspPI GGNCC 5 cut(s) 265, 506, 1120, 1709, 2177
PspPPI RGGWCCY 1 cut(s) 1120
PstI CTGCAG 1 cut(s) 1825
PstNI CAGNNNCTG 1 cut(s) 614
PsuI RGATCY 4 cut(s) 175, 758, 2128, 2750
RsaI GTAC 3 cut(s) 1946, 2258, 2600
RsaNI GTAC 3 cut(s) 1945, 2257, 2599
RseI CAYNNNNRTG 3 cut(s) 324, 389, 2330
SacI GAGCTC 1 cut(s) 2301
SaqAI TTAA 5 cut(s) 323, 387, 1848, 2136, 2781
Sau96I GGNCC 5 cut(s) 265, 506, 1120, 1709, 2177
SchI GAGTC 1 cut(s) 1325
ScrFI CCNGG 8 cut(s) 513, 1116, 1178, 1446, 1558, 2030, 2083, 2674
SduI GDGCHC 8 cut(s) 321, 405, 814, 1539, 2301, 2582, 2727, 2745
SfaNI GCATC 3 cut(s) 1543, 1645, 1659
SfcI CTRYAG 2 cut(s) 1821, 2478
SinI GGWCC 2 cut(s) 265, 1120
SmiMI CAYNNNNRTG 3 cut(s) 324, 389, 2330
SmlI CTYRAG 2 cut(s) 686, 1827
SmoI CTYRAG 2 cut(s) 686, 1827
SseBI AGGCCT 2 cut(s) 1114, 1898
SsiI CCGC 6 cut(s) 268, 310, 641, 1146, 2475, 2501
SspI AATATT 3 cut(s) 601, 1524, 1961
SspMI CTAG 5 cut(s) 188, 429, 938, 1079, 1841
SstI GAGCTC 1 cut(s) 2301
StuI AGGCCT 2 cut(s) 1114, 1898
StyD4I CCNGG 8 cut(s) 511, 1114, 1176, 1444, 1556, 2028, 2081, 2672
StyI CCWWGG 1 cut(s) 1899
TaiI ACGT 2 cut(s) 1010, 1707
TaqI TCGA 3 cut(s) 315, 1075, 1463
TatI WGTACW 2 cut(s) 1944, 2256
TauI GCSGC 1 cut(s) 644
TfiI GAWTC 5 cut(s) 68, 611, 979, 1361, 2645
Tru1I TTAA 5 cut(s) 323, 387, 1848, 2136, 2781
Tru9I TTAA 5 cut(s) 323, 387, 1848, 2136, 2781
TscAI CASTG 9 cut(s) 501, 670, 861, 1590, 1602, 1988, 2044, 2202, 2745
TseFI GTSAC 1 cut(s) 856
Tsp45I GTSAC 1 cut(s) 856
TspGWI ACGGA 3 cut(s) 714, 2616, 2743
TspRI CASTG 9 cut(s) 501, 670, 861, 1590, 1602, 1988, 2044, 2202, 2745
VpaK11BI GGWCC 2 cut(s) 265, 1120
VspI ATTAAT 2 cut(s) 387, 1848
XagI CCTNNNNNAGG 1 cut(s) 1420
XapI RAATTY 5 cut(s) 199, 245, 290, 1870, 2544
XbaI TCTAGA 1 cut(s) 937
XceI RCATGY 2 cut(s) 1039, 1304
XcmI CCANNNNNNNNNTGG 3 cut(s) 535, 847, 1525
XmiI GTMKAC 2 cut(s) 127, 627
XmnI GAANNNNTTC 1 cut(s) 910
XspI CTAG 5 cut(s) 188, 429, 938, 1079, 1841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.