Rh7AG193400
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000493
Physical Location & Seq
Reverse (-)
17300843 .. 17308112
7270 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG193400.1

Sequence Viewer

Length: 3459 bp
ATGTTGGTGGAATTACTAAGGAGAGAAAAGGCTGCAAATATTATGCCAGATCTTGATCTTGATCTCTACATGAAGGCAGCAACACTGGAAGGACGGGAAACTAATATTGTTACAGACTTTATTCTCAAGGTTTTGGGACTCGAAGATTGTGCTGAAATTATGGTAGGAGATGAAATGACCAGAGGTATCTCTGGTGGACAAAAAAAGCGACTCACCACAGGGGAGATGCTGGTTGGACCAGAAAGAGTACTTCTCATGGATGAGATATCAAACGGGCTGGACAGTTCAACAACATTGCAAATAGTGAAATCGCTACAACAATACGTCCACATCCTCAACGGAACTGCACTAATCGTTCTACTGCAGCCAGCACCAGAGACTTATGATCTCTTCGATGATATAATTCTCCTTTCGGATGGCTACATTGTGTATCAAGGTCCCCGTGAGAATGTTCTTGAGTTCTTTGAGTACATGGGCTTCAAATGTCCAGAGCGGAAAGGAGTTGCTGATTTCCTACAAGAGGTGACATCAAGAAAAGATCAAGAGCAATACTGGGCTCATATGGATAGGCCTCATAGCTTTGTAACAACCAAAGAATTTTCTGAAGCAATGCAGTTATTTCACATTGGTAGAAAACTTGGTGATGAGCTTTCTATTCCATTTAACAAGTCAGAAGGCTGCCCTGGTGCTTTGTCAACTAAAAAATATGGTGTTAGTAAGAAGGAATTGTTCAAAGCTTGTATGGCTAGACAAATTTTGCTTACAAAGAGGAATTCATTTGTCTACATTTTCAAATTGGTGCAGCTTATTCTAGTTGCTGTTACAACAATGACACTATTTTTTCATACTGAGATGGAGCGAAACACAGTTGCAGATGGTAGGATTTATATGGGAGCTTTATTCTATACGCTACTCGCAATTATGCTTAATGGGTTTGCAGAGCTTCATATGACAGTCACTAGACTGCCTGTGTTTTTCAAGCAAAGGGACCATCTGTTCTATCCTGCTTGGGCATACTCTTTACCCCCATGGCTGATAAGGATCCCTATAACTTTTGTGGACGTTTTCATCTGGGTGATCATTACTTACTACAGTGTAGGTTATGATCCGAGCGTTGAAAGGTTTTTCAAACAGTTCCTTCTACTGCTGTGTATTAGCCAGATGGCAAATGGACTGTTTCGATTGATAGGGGCACTAGGAAGGAACATGACTATTGCAAATACATTTGGATTTGGTACTGTACTAGTCATTCTTGGTCTGTGTGGCTTTATCATATCAAAAGAGGATTTGAAGAAATGGTTGTTGTGGGGATATTGGCTCTCACCAATCACGTATGGACTGAATGCCATTGCTGTCAATGAATTTCTCGGAAAAAGTTGGAGACATGTTCCTGCCAACTCAACAGAAGCATTAGGAGTTATGGTCTTGAAGTACCAAGGCATATTCCCAGAGGCCCGCTTCTACTGGATTGGATTAGTAGCTTTGATTGGATTTATTCTTCTGTTGAATTTCCTTTTCACCTTGGCACTTCAGTATCTTGATCCACTTGAGATGCCCCAAGCAGTACTATCCAATGAGGCATCCTCTACAACAGAGGATAGCAGAGTTGCAAGCAATCCTACTATGCAGCATGGCATGGTTCTTCCATTTGAACCCCTTTCAATTACTTTCGAGGAAATCAGATATGCTGTTGATATGCCTGAGGAAATGAAAGGTCAAAGCGCAACTCGAGATCGGCTAGAACTTCTGAAGGGTGTGAGTGGTACTTTTAGGCCTGGAGTTCTAACAGCTTTGATGGGTGTTAGTGGTGCTGGGAAAACCACTCTCATGGATGTCTTGGCAGGAAGGAAGACAAGTGGATATATTGAGGGGAGGATCACCTTATCTGGCTATGCAAAAAGGCAAGAAACATTTGCTCGCATATCAGGATACTGTGAGCAAACAGATATACACTCCCCTCATGTCACAGTTTACGAGTCTTTGGTTTACTCTGCATGGCTCCGATTGCCCCGGGAGGTTGATTCCCCAACCAGAAAGATGTTTATTGAGGAAGTCATGGAGCTTGTAGAAATGACCTCAATAAGTGACAGACTCGTTGGATTGCCAGGAGTGAATGGTCTCTCAACTGAACAACGCAAAAGGATAACAATTGCAGTAGAGCTTGTTGCCAACCCCTCGATAATATTTATGGATGAGCCGACATCTGGCCTCGATGCTAGGGCAGCAGCAATTGTAATGAGAACGGTGAGGAATACAGTGGACACTGGGAGAACTGTAGTCTGTACCATCCACCAACCAAGCATTGATATATTTGATGCTTTTGATGAGATGTTGCTTCTGAAACAGGGAGGCGAAGAAATATATGTTGGCCCTTTAGGCCACCATTCTTCCCAGATGATTGAATACTTTGAGGAGATTAGTGGAGTTTCTAAAATCAAGGATGGTTACAATCCAGCAACCTGGATGTTGGAGGTTACTTCTCCAGCACAAGAAGCATCTCTTGGGGTTGATTTTGCCAACATATACAAGAATTCAGAAATATATAGGACAAATAAGGCATTGATAAAGGAACTAAGTACTCCTGCACCAAATTCAAAGGACTTGTACTTCCCAACACAATATTCGCAGTCCTTCTTTACCCAGTGTCTAGCTTGCCTATGGAAACAGAGTGTATCATATTGGCGAAACTCTCAATACACTGCAGTGAGACTTCTTTTCACAGCTATGATGGCCGGAGTACTTGGGTCATTTTTTTGGGATCTTGGCTCCAAAAGACAAAAGCAAAGAGATCTCTTTTGTGCAATGGGTTCTATGTATGCTGCTGTGCTCTTTATTGGTATACAAAATTCCTTGTCAGTGCAGCCAATTGTAGGTGTTGAGAGGTTGGTCTCTTACAGAGAAACGGCTGCTGGAATGTACTCAGCATTTCCATTTGCCTTTGGACAGGCTATCATTGAGATCCCATACACTTTGATCCAGACTATTATATTTGGGGTTATAGCATACTCCATGGTCGGATTTGATTGGACAGTCAGCAAGTTCTTTTGTTATCTCTTGTTCATGTACCTCACCTTCTTATACTTCACCTTCCATGGCATGATGATTGTGGCCATTACTCCCAACACCACCATCTCTGCTGTAGTTTCGTCTGCCTTCTATCCATTATGGAATGTTATTTCAGGATATCTCATTCCCAAAACAAGAATTCCAATATGGTGGAGATGGTTCTATTGGGTCAGCCCAACCTCTTGGAGCTTGTATGGATTGTTTTCTTCACAGTTTGGAGGTCTCAAGGACACACTTGATTCTGGTGAAACTGTAGATCATTTTATGAGGACATATTTTGGATATAGGAAAGACTTTCTAGGCGTTGTTGTAGCTGTGCTTGTTGGGTTTGCAGCGTTCTTTGTTTTCATCTTTGCTTTTGCAATCAAGAAACTGAACTTCCAAAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1152

Amino Acids

130.39

Weight (kDa)

6.31

Isoelectric Point (pI)

37.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC2_membrane_7 PF19055 122 - 173 1e-05 ABC-2 type transporter
ABC2_membrane PF01061 243 - 455 2e-48 ABC-2 type transporter
PDR_assoc PF08370 460 - 522 5.4e-23 Plant PDR ABC transporter associated
ABC_tran PF00005 583 - 735 1.4e-21 ABC transporter
ABC2_membrane PF01061 880 - 1094 2.3e-53 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 493
AccI GTMKAC 2 cut(s) 783, 2839
AciI CCGC 2 cut(s) 493, 1456
AclWI GGATC 8 cut(s) 1036, 1049, 1100, 1535, 1883, 2766, 2953, 2968
AcoI YGGCCR 2 cut(s) 2730, 3108
AcsI RAATTY 9 cut(s) 596, 753, 772, 1361, 1507, 2530, 2590, 2845, 3204
AcuI CTGAAG 3 cut(s) 624, 1514, 1769
AfiI CCNNNNNNNGG 3 cut(s) 520, 2204, 2870
AflIII ACRYGT 1 cut(s) 1384
AhlI ACTAGT 1 cut(s) 1243
AjnI CCWGG 4 cut(s) 682, 1774, 2104, 2459
AjuI GAANNNNNNNTTGG 6 cut(s) 2349, 2381, 2484, 2516, 2605, 2637
AleI CACNNNNGTG 1 cut(s) 2702
AloI GAACNNNNNNTCC 2 cut(s) 980, 1012
Alw21I GWGCWC 1 cut(s) 2829
Alw26I GTCTC 6 cut(s) 371, 1375, 2123, 2701, 2893, 3293
AlwI GGATC 8 cut(s) 1036, 1049, 1100, 1535, 1883, 2766, 2953, 2968
Ama87I CYCGRG 2 cut(s) 1728, 2010
AoxI GGCC 8 cut(s) 569, 1452, 1772, 2206, 2368, 2377, 2730, 3108
ApoI RAATTY 9 cut(s) 596, 753, 772, 1361, 1507, 2530, 2590, 2845, 3204
AspLEI GCGC 1 cut(s) 1724
AspS9I GGNCC 5 cut(s) 236, 437, 988, 1453, 2369
AsuC2I CCSGG 2 cut(s) 2011, 2012
AvaI CYCGRG 2 cut(s) 1728, 2010
AvaII GGWCC 3 cut(s) 236, 437, 988
AxyI CCTNAGG 1 cut(s) 1701
BaeGI GKGCMC 1 cut(s) 1195
BaeI ACNNNNGTAYC 2 cut(s) 1517, 1550
BalI TGGCCA 1 cut(s) 3110
BamHI GGATCC 1 cut(s) 1041
BanII GRGCYC 1 cut(s) 559
BarI GAAGNNNNNNTAC 4 cut(s) 461, 493, 3056, 3088
BbsI GAAGAC 1 cut(s) 1856
Bbv12I GWGCWC 1 cut(s) 2829
BceAI ACGGC 1 cut(s) 2919
BcgI CGANNNNNNTGC 2 cut(s) 131, 165
BciT130I CCWGG 4 cut(s) 684, 1776, 2106, 2461
BciVI GTATCC 1 cut(s) 1922
BclI TGATCA 1 cut(s) 1077
BcnI CCSGG 2 cut(s) 2011, 2012
BcoDI GTCTC 6 cut(s) 371, 1375, 2123, 2701, 2893, 3293
BcuI ACTAGT 1 cut(s) 1243
BfaI CTAG 9 cut(s) 747, 812, 960, 1196, 1244, 1739, 2217, 2648, 3365
BfmI CTRYAG 6 cut(s) 362, 1090, 2274, 2700, 3138, 3318
BfuI GTATCC 1 cut(s) 1922
BglI GCCNNNNNGGC 1 cut(s) 2376
BglII AGATCT 2 cut(s) 49, 2788
BmcAI AGTACT 4 cut(s) 249, 1566, 2578, 2739
Bme1390I CCNGG 6 cut(s) 684, 1776, 2011, 2012, 2106, 2461
Bme18I GGWCC 3 cut(s) 236, 437, 988
BmeT110I CYCGRG 2 cut(s) 1728, 2010
BmgT120I GGNCC 5 cut(s) 236, 437, 988, 1453, 2369
BmiI GGNNCC 5 cut(s) 439, 989, 1043, 2000, 2767
BmrFI CCNGG 6 cut(s) 684, 1776, 2011, 2012, 2106, 2461
BmrI ACTGGG 3 cut(s) 562, 2274, 2635
BmsI GCATC 6 cut(s) 216, 1542, 1589, 2203, 2305, 2504
BmuI ACTGGG 3 cut(s) 562, 2274, 2635
BpiI GAAGAC 1 cut(s) 1856
BplI GAGNNNNNCTC 4 cut(s) 237, 269, 1568, 1600
BpmI CTGGAG 2 cut(s) 1797, 2466
BpuEI CTTGAG 4 cut(s) 110, 476, 1568, 3275
BpuMI CCSGG 2 cut(s) 2011, 2012
BsaAI YACGTR 1 cut(s) 1332
BsaBI GATNNNNATC 3 cut(s) 54, 60, 1040
BsaI GGTCTC 3 cut(s) 2123, 2893, 3293
BsaJI CCNNGG 8 cut(s) 682, 1028, 1435, 1521, 2009, 2010, 3009, 3091
BsaXI ACNNNNNCTCC 2 cut(s) 1407, 1437
Bsc4I CCNNNNNNNGG 3 cut(s) 520, 2204, 2870
Bse1I ACTGG 5 cut(s) 90, 557, 1469, 2269, 2641
Bse21I CCTNAGG 1 cut(s) 1701
Bse3DI GCAATG 4 cut(s) 293, 615, 1347, 2808
Bse8I GATNNNNATC 3 cut(s) 54, 60, 1040
BseBI CCWGG 4 cut(s) 684, 1776, 2106, 2461
BseDI CCNNGG 8 cut(s) 682, 1028, 1435, 1521, 2009, 2010, 3009, 3091
BseGI GGATG 9 cut(s) 265, 330, 421, 1580, 1837, 2197, 2286, 2446, 2469
BseJI GATNNNNATC 3 cut(s) 54, 60, 1040
BseLI CCNNNNNNNGG 3 cut(s) 520, 2204, 2870
BseMI GCAATG 4 cut(s) 293, 615, 1347, 2808
BseMII CTCAG 3 cut(s) 840, 1692, 2934
BseNI ACTGG 5 cut(s) 90, 557, 1469, 2269, 2641
BseRI GAGGAG 1 cut(s) 2426
BseSI GKGCMC 1 cut(s) 1195
BseYI CCCAGC 1 cut(s) 1811
BsgI GTGCAG 4 cut(s) 330, 821, 2568, 2879
BshFI GGCC 8 cut(s) 571, 1454, 1774, 2208, 2370, 2379, 2732, 3110
BsiHKAI GWGCWC 1 cut(s) 2829
BsiHKCI CYCGRG 2 cut(s) 1728, 2010
BsiSI CCGG 2 cut(s) 2011, 2733
BslFI GGGAC 3 cut(s) 150, 423, 1001
BslI CCNNNNNNNGG 3 cut(s) 520, 2204, 2870
BsmAI GTCTC 6 cut(s) 371, 1375, 2123, 2701, 2893, 3293
BsmFI GGGAC 3 cut(s) 150, 423, 1001
BsmI GAATGC 1 cut(s) 1348
BsnI GGCC 8 cut(s) 571, 1454, 1774, 2208, 2370, 2379, 2732, 3110
Bso31I GGTCTC 3 cut(s) 2123, 2893, 3293
BsoBI CYCGRG 2 cut(s) 1728, 2010
Bsp1286I GDGCHC 3 cut(s) 559, 1195, 2829
Bsp19I CCATGG 3 cut(s) 1028, 3009, 3091
BspACI CCGC 2 cut(s) 493, 1456
BspANI GGCC 8 cut(s) 571, 1454, 1774, 2208, 2370, 2379, 2732, 3110
BspCNI CTCAG 3 cut(s) 841, 1693, 2933
BspLI GGNNCC 5 cut(s) 439, 989, 1043, 2000, 2767
BspMAI CTGCAG 2 cut(s) 366, 2704
BspPI GGATC 8 cut(s) 1036, 1049, 1100, 1535, 1883, 2766, 2953, 2968
BspTNI GGTCTC 3 cut(s) 2123, 2893, 3293
BsrBI CCGCTC 1 cut(s) 493
BsrDI GCAATG 4 cut(s) 293, 615, 1347, 2808
BsrI ACTGG 5 cut(s) 90, 557, 1469, 2269, 2641
BssECI CCNNGG 8 cut(s) 682, 1028, 1435, 1521, 2009, 2010, 3009, 3091
BssNAI GTATAC 1 cut(s) 2840
BssT1I CCWWGG 5 cut(s) 1028, 1435, 1521, 3009, 3091
Bst1107I GTATAC 1 cut(s) 2840
Bst2UI CCWGG 4 cut(s) 684, 1776, 2106, 2461
Bst6I CTCTTC 1 cut(s) 395
BstBAI YACGTR 1 cut(s) 1332
BstC8I GCNNGC 5 cut(s) 369, 1456, 1612, 1918, 2653
BstDEI CTNAG 5 cut(s) 17, 849, 1701, 2573, 2920
BstDSI CCRYGG 3 cut(s) 1028, 3009, 3091
BstENI CCTNNNNNAGG 1 cut(s) 518
BstF5I GGATG 9 cut(s) 265, 330, 421, 1580, 1837, 2197, 2286, 2446, 2469
BstHHI GCGC 1 cut(s) 1724
BstMAI GTCTC 6 cut(s) 371, 1375, 2123, 2701, 2893, 3293
BstMWI GCNNNNNNNGC 6 cut(s) 743, 2005, 2222, 2376, 2492, 2729
BstNI CCWGG 4 cut(s) 684, 1776, 2106, 2461
BstNSI RCATGY 1 cut(s) 1388
BstSCI CCNGG 6 cut(s) 682, 1774, 2009, 2010, 2104, 2459
BstSFI CTRYAG 6 cut(s) 362, 1090, 2274, 2700, 3138, 3318
BstSLI GKGCMC 1 cut(s) 1195
BstV2I GAAGAC 1 cut(s) 1856
BstX2I RGATCY 5 cut(s) 49, 1041, 2758, 2788, 2958
BstXI CCANNNNNNTGG 4 cut(s) 1828, 2460, 3216, 3249
BstYI RGATCY 5 cut(s) 49, 1041, 2758, 2788, 2958
BstZ17I GTATAC 1 cut(s) 2840
Bsu36I CCTNAGG 1 cut(s) 1701
BsuI GTATCC 1 cut(s) 1922
BsuRI GGCC 8 cut(s) 571, 1454, 1774, 2208, 2370, 2379, 2732, 3110
BtgI CCRYGG 3 cut(s) 1028, 3009, 3091
BtsCI GGATG 9 cut(s) 265, 330, 421, 1580, 1837, 2197, 2286, 2446, 2469
BtsI GCAGTG 2 cut(s) 2697, 2709
BtsIMutI CAGTG 8 cut(s) 83, 1099, 2262, 2262, 2648, 2697, 2709, 2862
Cac8I GCNNGC 5 cut(s) 369, 1456, 1612, 1918, 2653
CfoI GCGC 1 cut(s) 1724
Cfr13I GGNCC 5 cut(s) 236, 437, 988, 1453, 2369
Cfr9I CCCGGG 1 cut(s) 2010
DdeI CTNAG 5 cut(s) 17, 849, 1701, 2573, 2920
EaeI YGGCCR 2 cut(s) 2730, 3108
Eam1104I CTCTTC 1 cut(s) 395
EarI CTCTTC 1 cut(s) 395
Eco130I CCWWGG 5 cut(s) 1028, 1435, 1521, 3009, 3091
Eco147I AGGCCT 2 cut(s) 571, 1774
Eco24I GRGCYC 1 cut(s) 559
Eco31I GGTCTC 3 cut(s) 2123, 2893, 3293
Eco32I GATATC 2 cut(s) 267, 3185
Eco47I GGWCC 3 cut(s) 236, 437, 988
Eco57I CTGAAG 3 cut(s) 624, 1514, 1769
Eco81I CCTNAGG 1 cut(s) 1701
Eco88I CYCGRG 2 cut(s) 1728, 2010
EcoNI CCTNNNNNAGG 1 cut(s) 518
EcoO109I RGGNCCY 1 cut(s) 437
EcoRI GAATTC 3 cut(s) 772, 2530, 3204
EcoRII CCWGG 4 cut(s) 682, 1774, 2104, 2459
EcoRV GATATC 2 cut(s) 267, 3185
EcoT14I CCWWGG 5 cut(s) 1028, 1435, 1521, 3009, 3091
EcoT38I GRGCYC 1 cut(s) 559
ErhI CCWWGG 5 cut(s) 1028, 1435, 1521, 3009, 3091
FalI AAGNNNNNCTT 2 cut(s) 2484, 2516
FaqI GGGAC 3 cut(s) 150, 423, 1001
FauI CCCGC 1 cut(s) 1463
FauNDI CATATG 2 cut(s) 561, 948
FbaI TGATCA 1 cut(s) 1077
FblI GTMKAC 2 cut(s) 783, 2839
FokI GGATG 9 cut(s) 272, 317, 428, 1567, 1844, 2204, 2273, 2453, 2476
FriOI GRGCYC 1 cut(s) 559
FspBI CTAG 9 cut(s) 747, 812, 960, 1196, 1244, 1739, 2217, 2648, 3365
GlaI GCGC 1 cut(s) 1723
GsaI CCCAGC 1 cut(s) 1815
GsuI CTGGAG 2 cut(s) 1797, 2466
HaeIII GGCC 8 cut(s) 571, 1454, 1774, 2208, 2370, 2379, 2732, 3110
HapII CCGG 2 cut(s) 2011, 2733
HhaI GCGC 1 cut(s) 1724
Hin6I GCGC 1 cut(s) 1722
HinP1I GCGC 1 cut(s) 1722
HincII GTYRAC 1 cut(s) 696
HindII GTYRAC 1 cut(s) 696
HindIII AAGCTT 1 cut(s) 735
HinfI GANTC 6 cut(s) 138, 210, 1976, 2021, 2091, 3305
HpaII CCGG 2 cut(s) 2011, 2733
Hpy166II GTNNAC 9 cut(s) 197, 328, 696, 784, 1060, 1972, 1987, 2260, 2840
Hpy8I GTNNAC 9 cut(s) 197, 328, 696, 784, 1060, 1972, 1987, 2260, 2840
HpyCH4IV ACGT 3 cut(s) 324, 1062, 1331
HpyF10VI GCNNNNNNNGC 6 cut(s) 743, 2005, 2222, 2376, 2492, 2729
HpyF3I CTNAG 5 cut(s) 17, 849, 1701, 2573, 2920
HpySE526I ACGT 3 cut(s) 324, 1062, 1331
HspAI GCGC 1 cut(s) 1722
Ksp22I TGATCA 1 cut(s) 1077
LmnI GCTCC 6 cut(s) 856, 893, 2004, 2059, 2771, 3252
LweI GCATC 6 cut(s) 216, 1542, 1589, 2203, 2305, 2504
MaeI CTAG 9 cut(s) 747, 812, 960, 1196, 1244, 1739, 2217, 2648, 3365
MaeII ACGT 3 cut(s) 324, 1062, 1331
MaeIII GTNAC 9 cut(s) 109, 523, 583, 820, 955, 1963, 2084, 2444, 2473
MbiI CCGCTC 1 cut(s) 493
MboII GAAGA 9 cut(s) 155, 382, 1303, 1490, 1634, 1861, 2366, 2379, 3264
MfeI CAATTG 3 cut(s) 2148, 2229, 2865
MflI RGATCY 5 cut(s) 49, 1041, 2758, 2788, 2958
MhlI GDGCHC 3 cut(s) 559, 1195, 2829
MlsI TGGCCA 1 cut(s) 3110
MluNI TGGCCA 1 cut(s) 3110
MlyI GAGTC 4 cut(s) 132, 204, 1985, 2085
MmeI TCCRAC 5 cut(s) 214, 1358, 2077, 2448, 2995
Mox20I TGGCCA 1 cut(s) 3110
MscI TGGCCA 1 cut(s) 3110
MseI TTAA 2 cut(s) 663, 927
MslI CAYNNNNRTG 4 cut(s) 1073, 1826, 2702, 2723
Msp20I TGGCCA 1 cut(s) 3110
MspI CCGG 2 cut(s) 2011, 2733
MspR9I CCNGG 6 cut(s) 684, 1776, 2011, 2012, 2106, 2461
MunI CAATTG 3 cut(s) 2148, 2229, 2865
Mva1269I GAATGC 1 cut(s) 1348
MvaI CCWGG 4 cut(s) 684, 1776, 2106, 2461
MwoI GCNNNNNNNGC 6 cut(s) 743, 2005, 2222, 2376, 2492, 2729
NciI CCSGG 2 cut(s) 2011, 2012
NcoI CCATGG 3 cut(s) 1028, 3009, 3091
NdeI CATATG 2 cut(s) 561, 948
NlaIV GGNNCC 5 cut(s) 439, 989, 1043, 2000, 2767
NmuCI GTSAC 4 cut(s) 523, 955, 1963, 2084
NspI RCATGY 1 cut(s) 1388
OliI CACNNNNGTG 1 cut(s) 2702
PaeR7I CTCGAG 1 cut(s) 1728
PceI AGGCCT 2 cut(s) 571, 1774
PciI ACATGT 1 cut(s) 1384
PctI GAATGC 1 cut(s) 1348
PfeI GAWTC 2 cut(s) 2021, 3305
PleI GAGTC 4 cut(s) 132, 204, 1984, 2085
PpsI GAGTC 4 cut(s) 132, 204, 1984, 2085
Ppu21I YACGTR 1 cut(s) 1332
PpuMI RGGWCCY 1 cut(s) 437
PscI ACATGT 1 cut(s) 1384
Psp5II RGGWCCY 1 cut(s) 437
Psp6I CCWGG 4 cut(s) 682, 1774, 2104, 2459
PspFI CCCAGC 1 cut(s) 1811
PspGI CCWGG 4 cut(s) 682, 1774, 2104, 2459
PspN4I GGNNCC 5 cut(s) 439, 989, 1043, 2000, 2767
PspPI GGNCC 5 cut(s) 236, 437, 988, 1453, 2369
PspPPI RGGWCCY 1 cut(s) 437
PstI CTGCAG 2 cut(s) 366, 2704
PsuI RGATCY 5 cut(s) 49, 1041, 2758, 2788, 2958
RseI CAYNNNNRTG 4 cut(s) 1073, 1826, 2702, 2723
SaqAI TTAA 2 cut(s) 663, 927
Sau96I GGNCC 5 cut(s) 236, 437, 988, 1453, 2369
ScaI AGTACT 4 cut(s) 249, 1566, 2578, 2739
SchI GAGTC 4 cut(s) 132, 204, 1985, 2085
ScrFI CCNGG 6 cut(s) 684, 1776, 2011, 2012, 2106, 2461
SduI GDGCHC 3 cut(s) 559, 1195, 2829
SfaNI GCATC 6 cut(s) 216, 1542, 1589, 2203, 2305, 2504
SfcI CTRYAG 6 cut(s) 362, 1090, 2274, 2700, 3138, 3318
SfiI GGCCNNNNNGGCC 1 cut(s) 2376
Sfr274I CTCGAG 1 cut(s) 1728
SinI GGWCC 3 cut(s) 236, 437, 988
SlaI CTCGAG 1 cut(s) 1728
SmaI CCCGGG 1 cut(s) 2012
SmiMI CAYNNNNRTG 4 cut(s) 1073, 1826, 2702, 2723
SmlI CTYRAG 5 cut(s) 125, 455, 1547, 1728, 3290
SmoI CTYRAG 5 cut(s) 125, 455, 1547, 1728, 3290
SpeI ACTAGT 1 cut(s) 1243
SseBI AGGCCT 2 cut(s) 571, 1774
SsiI CCGC 2 cut(s) 493, 1456
SspI AATATT 4 cut(s) 40, 106, 2184, 2621
SspMI CTAG 9 cut(s) 747, 812, 960, 1196, 1244, 1739, 2217, 2648, 3365
StuI AGGCCT 2 cut(s) 571, 1774
StyD4I CCNGG 6 cut(s) 682, 1774, 2009, 2010, 2104, 2459
StyI CCWWGG 5 cut(s) 1028, 1435, 1521, 3009, 3091
TaiI ACGT 3 cut(s) 327, 1065, 1334
TaqI TCGA 7 cut(s) 141, 393, 1180, 1671, 1729, 2177, 2211
TatI WGTACW 8 cut(s) 247, 468, 1240, 1564, 2576, 2604, 2737, 2916
TfiI GAWTC 2 cut(s) 2021, 3305
Tru1I TTAA 2 cut(s) 663, 927
Tru9I TTAA 2 cut(s) 663, 927
TscAI CASTG 8 cut(s) 90, 1099, 2262, 2269, 2648, 2704, 2709, 2862
TseFI GTSAC 4 cut(s) 523, 955, 1963, 2084
Tsp45I GTSAC 4 cut(s) 523, 955, 1963, 2084
TspGWI ACGGA 1 cut(s) 354
TspMI CCCGGG 1 cut(s) 2010
TspRI CASTG 8 cut(s) 90, 1099, 2262, 2269, 2648, 2704, 2709, 2862
VpaK11BI GGWCC 3 cut(s) 236, 437, 988
XagI CCTNNNNNAGG 1 cut(s) 518
XapI RAATTY 9 cut(s) 596, 753, 772, 1361, 1507, 2530, 2590, 2845, 3204
XceI RCATGY 1 cut(s) 1388
XcmI CCANNNNNNNNNTGG 1 cut(s) 1166
XhoI CTCGAG 1 cut(s) 1728
XmaI CCCGGG 1 cut(s) 2010
XmiI GTMKAC 2 cut(s) 783, 2839
XspI CTAG 9 cut(s) 747, 812, 960, 1196, 1244, 1739, 2217, 2648, 3365
ZrmI AGTACT 4 cut(s) 249, 1566, 2578, 2739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.