MD02G1032700.v1.1
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
2562617 .. 2568979
6363 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1032700.v1.1.491

Sequence Viewer

Length: 4218 bp
ATGAAGCTCAGCCGAGAAGAGCAGCCAAACTCCTCCTCCGAGTCGTATCGGAAAATGACGTCATGGGCTGCTTTAGAGCGACAGCCCACGCGCTCAAGAGCAAGGAGAGGTATTCTACTCGCGGAAGATCAAGAACACAACAGAGAGATTGATGTGAAGGAACTTGGATTAGTAGAAAGAAAAAACGTTTTGGAGAGGCTAATCCAGATTAATAATCCAAACCAAGATGAAACTGGTAATAATCCCACGTTCTTGCTCAAGCTCAAGGACCGCATGAACAGAGTTGGACTTGAATTTCCAACAACTGAGGTGCGGTTCGAGCATTTGAACGTTGAAGCAGAAGCTCACGTAGGAAGCAGGGCATCGCCTTCAATCCTCAATTTCTCCCTTAATATCTTAGAGGGGTTCCTGAAATGCTTTCACATTCTTACAAGTAAGAAGAAGCCAGTGTCGATCCTCCACGATGCAAGTGGGATTATCAAGCCAAGAAGAATGACACTTCTTTTAGGCCCCCCGGGCTCTGGAAAGACCACATTACTATTGGCATTGGCTGGAAAACTTAGCAAACACCATCTAAAACTTTCGGGGAGAGTTACATACAACGGACAAGGGATGGAGGAGTTTGTGCCGCAGAGGGCGGCAGCTTATGTTAGCCAACACGATCTCCACTTACCGGAATTGACAGTGAGAGAAACACTGGCTTTTTCAGCGAGATGTCATGGTGTTGGGCCGCGCTATGAATTGTTGGTAGAATTATTGAGAAGAGAGAAGGCTGCAAATGTCATGCCGGATCTTGATCTTGATCTAATCATGAAGGCAGCGGTACTAGAAGGACGGGAAGCCAATATAGTTACAGACTTAACACTCAAGGTTTTGAGACTGGAAGCTTGTGCTGACACCGTTGTAGGGGACGAAATGACCAGAGGCATATCCGGTGGACAAAAAAAGCGAGTCACGACAGGGGAGATGCTAGTCAGACCAGAAGGAGTACTTTTTATGGATGAGATATCGACTGGCCTGGACAGTTCTACAACATTTCAAATAGTGAATTCGCTGCGTCATTGTGTCTACATCCTCAATGGAACTGCATTAATCTCTCTCCTGCAGCCAGCACCGGAGACGTATGATCTTTTCGATGACATAATTCTCCTCTCGGATGGATACATTGTGTATCAAGGTCCCTGCGAGAATGTGCTTGAGTTCTTTGAGCACATGGGATTCAAATGTCCCCAGAGGAAAGGAGTCGCCGATTTCTTACAAGAAGTGACATCAAGGAAAGACCAAGAGCAATACTGGATCTATAGAGATAAGCCTTATGGCTTTGTAACTCCCAAAGAGTTTTCTGAAGCAATGAATTCGTTTCACATTGGTCAAAAACTCGGCGATGAGCTAGCTATTCCATTTAACAAGTCTGAAGGCCACCCTTTGGATTTAACAACTAAGAAGTATGGTGCTAGCAACAAGGAACTGTTAAAAGCTTGTATGGACAGACAAATTATTCTTATGAAGCGGAATAAATTCGTCTACATTTTCAAATTGGTGCAGCTTATTGTAGCTGCTTTTGTAACAACGACGTTATTCCTACGCACTGAGATGCACCGGAATACAGTAGCAGATGGTGGAATTTATATGGGAGCTATGTTCTTTACACTGCTATCAATCATGTTCAATGGGTTTGCGGAGCTGCACATGGCTGTTGAGAGACTTCCGGCCTTTTACAAGCAAAGGGACGATCTGTTCTATCCAGCTTGGGTGTATACTCTACCTCAATGGATGATACGGATCCCTATGACATTTGTGGAAGTCTCCATTTGGATGCTCATCACTTACTATCCCATTGGTTATGATCCAAGCCTTGCAAGGTTCTTCAAGCAGTTCCTTGTGCTAGCGTGTATTAGCCAGATGGCAAATGGACTTTTTCGATTGATAGGGGTAGTAGGAAGGAACATAACTGCTGCAAATACATTCGGGTTTGTTGCTTTCCTCATCATTCTTGGTCTGAGCGGCTTTGTTTTACCACGAGACGATATGAACAAGTGGACGTTGTGGGGATATTATCTCTCACCATTCACATACGGACTGAATGCGATGGCTGTAAATGAATTTCTGGGAAAATGTTGGAGACATGTTCCTGCAAACTCAGCAGAAGCGTTAGGAGTTATAGTCTTGAAGTCTCAAGGAATATCTCCGGAAGCACGTTGGTATTGGATTGGAGTGGCAGCTTTGATCGGATTTACTCTTCTATTCAACTTCCTTTTCACGTTTGCACTTGAGTATCTTGATCCATTTGAAGAGCCCCGTGCCGCATCAGAAGTGTCCAATGAGGCTTTGACTGCGGTATCAGAGGGAAGCGACATGGAAGCCAATAGTACAAAGAGGCAGCACGGAATGGTTCTGCCTTTTCAACCTCTTTCGGTTACTTTTAATGAAATACGATATGCGATTGACATGCCTCATGAAAAGAAAGTTCAAGGCATAAGTGATGAAGGCTTCCGGAAAGAAATTCTCAAGGGTGTGAGTGGAACTTTTAGGCCAGGAGTCTTAACAGCCCTAATGGGTGTTAGTGGCGCGGGTAAAACCACTCTACTGGATGTTTTGGCAGGAAGGAAAACGAGTGGACATATCGAGGGTAGCATCACAATATCCGGATATACAAAAAACCAAGACACATTTGCTCGCGTAACAGGATACTGCGAGCAAACAGATATCCACTCTCCTCATGTTGCAGTGTACGAGTCTTTGGTTTACTCTGCATGGCTCCGGTTACCCCCTGAGGTTGATTCCCGCAGCAGAAGGATGTTCATCGAGGAAGTAATGGAGCTTGTGGAATTGACTCCAATACGCAACGCACTTGTTGGATTGCCTGGTGTGAATGGTCTCTCAACGGAGCAGCGCAAAAGGCTAACAATTGCGGTAGAGCTTGTTGCCAACCCATCCATCATATTTATGGATGAGCCGACCTCTGGCCTTGATGCCAGGGCAGCAGCAATTGTAATGAGAACGGTGAGAAATACAGTGGACACTGGGAGGACCGTAGTCTGCACCATCCACCAGCCAAGCATTGATATATTCGATGCCTTCGATGAGATGCTGCTCTTGAAAGAGGGAGGCGAAGAAATATACGTTGGCCCTTTAGGCCACCATTCTTCCAAGTTGATCGATTACTTTGAGGGGATTAATGGAGTTCCGAAAATAAAGGATGGTTACAATCCGGCAACATGGATGTTGGAGGTTACTTCTGCAGCACAAGAAGCAGCGCTTGGGATTAATTTCGCTGAAATATACAAGAACTCAGAAATATACGGGAGAAACAAGGCCTTGATCAAGGAGCTAAGCACCCCTGCACCAAATTCGAAAGACTTGTACTTCCCGTCACAATATTCTCAATCGTTCTTTACCCAGTGTCGAGCTTGCTTATGGAAGCAACACATATCATATTGGCGAAACCCGCAATATAGTGCAATGAAGCTGTTTTACACAGCTATGATGGCTTTACTCTTTGGAACAATTTTCTGGGATCTTGGCACCAAAAGGGAAAGGGAAAGAGATCTTTTAAACGCAATCGGTTCAATGTATGCTGCTGTTCTCTTCATTGGGATACAAAACTCCTTAGCAGTGCAGCCAGTCGTAGGCATCGAGAGGATGGTGTCTTACAGAGAAAGGGCTGCCGGGATGTACTCAGCGTTTCCTTTTGCCTTCGGACAGGCCGTCATTGAGATTCCATACACGTTGATCCAAACTATCATCTACGGAGTTATAGTGTACACAATGGTCGGATTTGAGTGGACGGTCAGCAAATTCTTTTTGTATCTCGTCTTCATGTGCTTCACCTTCCTGTACTTCACCTTCCATGGCATGATGGCAGTGGCCATTACTCCCAATAACACCATCTCTATCGTTGTTTCATCCGCCTTCTATCCGCTATGGAACGTTATTTCTGGATATCTCATTCCCAAAACAAGAATTCCACTATGGTGGAGATGGTTCTACTGGATTAGCCCGACATCGTGGAGCCTGTACGGCTTGTTTTCTTCGCAATTTGGAGGCATCACGGACAGACTTGATTCCGGTGAAACTGTGGACGAATTTATGAGGTCTTATTTTGGGTATAGGAACGACTTTGTAGGCATTGTTGCAACTGTGTTGGTCGGGTTTTCAGTACTATTTGTTTTCGTCTTTGCCTTAGGAATCAAAAAATTGAACTACCAAAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1406

Amino Acids

158.68

Weight (kDa)

7.35

Isoelectric Point (pI)

37.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 153 - 335 5e-17 ABC transporter
ABC2_membrane_7 PF19055 369 - 419 7.9e-06 ABC-2 type transporter
ABC2_membrane PF01061 490 - 702 9.1e-50 ABC-2 type transporter
PDR_assoc PF08370 707 - 768 3.4e-25 Plant PDR ABC transporter associated
ABC_tran PF00005 836 - 988 7.5e-21 ABC transporter
ABC2_membrane PF01061 1133 - 1347 9e-56 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 62
AccB1I GGYRCC 1 cut(s) 3524
AccB7I CCANNNNNTGG 1 cut(s) 1426
AccBSI CCGCTC 1 cut(s) 2004
AccI GTMKAC 3 cut(s) 1068, 1524, 1757
AccII CGCG 5 cut(s) 91, 122, 733, 2570, 2679
AccIII TCCGGA 3 cut(s) 2188, 2493, 2645
AclI AACGTT 3 cut(s) 186, 330, 3930
AclWI GGATC 9 cut(s) 448, 798, 1304, 1777, 1790, 1841, 2276, 3525, 3727
AcoI YGGCCR 1 cut(s) 3867
AcuI CTGAAG 2 cut(s) 1365, 1434
AcyI GRCGYC 1 cut(s) 59
AfeI AGCGCT 1 cut(s) 3258
AfiI CCNNNNNNNGG 6 cut(s) 521, 673, 906, 1426, 2963, 3629
AflIII ACRYGT 2 cut(s) 2125, 3726
AhdI GACNNNNNGTC 1 cut(s) 3707
AjnI CCWGG 4 cut(s) 1017, 2533, 2863, 2975
AjuI GAANNNNNNNTTGG 4 cut(s) 3108, 3140, 3243, 3275
AleI CACNNNNGTG 1 cut(s) 3973
AloI GAACNNNNNNTCC 2 cut(s) 1721, 1753
Alw21I GWGCWC 1 cut(s) 1212
Alw26I GTCTC 8 cut(s) 871, 1112, 1696, 1810, 2016, 2116, 2178, 2882
AlwI GGATC 9 cut(s) 448, 798, 1304, 1777, 1790, 1841, 2276, 3525, 3727
Ama87I CYCGRG 1 cut(s) 514
Aor13HI TCCGGA 3 cut(s) 2188, 2493, 2645
Aor51HI AGCGCT 1 cut(s) 3258
AseI ATTAAT 4 cut(s) 210, 1091, 3177, 3267
Asp700I GAANNNNTTC 1 cut(s) 1517
AspLEI GCGC 5 cut(s) 93, 735, 2570, 2895, 3259
AspS9I GGNCC 6 cut(s) 268, 509, 728, 1178, 3030, 3128
AsuC2I CCSGG 3 cut(s) 515, 516, 3670
AsuHPI GGTGA 5 cut(s) 2055, 3016, 3820, 3835, 4082
AsuII TTCGAA 1 cut(s) 3353
AsuNHI GCTAGC 3 cut(s) 1390, 1454, 1885
AvaI CYCGRG 1 cut(s) 514
AvaII GGWCC 3 cut(s) 268, 1178, 3030
AxyI CCTNAGG 2 cut(s) 2772, 4183
BaeI ACNNNNGTAYC 4 cut(s) 2258, 2291, 2322, 2355
BalI TGGCCA 1 cut(s) 3869
BamHI GGATCC 1 cut(s) 1782
BanI GGYRCC 1 cut(s) 3524
BanII GRGCYC 2 cut(s) 521, 2298
BarI GAAGNNNNNNTAC 6 cut(s) 3458, 3490, 3800, 3830, 3832, 3862
BauI CACGAG 1 cut(s) 2019
BbsI GAAGAC 1 cut(s) 3808
Bbv12I GWGCWC 1 cut(s) 1212
BceAI ACGGC 2 cut(s) 3692, 4036
BcgI CGANNNNNNTGC 6 cut(s) 1338, 1372, 2431, 2465, 3333, 3367
BciT130I CCWGG 4 cut(s) 1019, 2535, 2865, 2977
BciVI GTATCC 3 cut(s) 1154, 2681, 3591
BclI TGATCA 1 cut(s) 3321
BcnI CCSGG 3 cut(s) 515, 516, 3670
BcoDI GTCTC 8 cut(s) 871, 1112, 1696, 1810, 2016, 2116, 2178, 2882
BfaI CTAG 5 cut(s) 827, 971, 1391, 1455, 1886
BfmI CTRYAG 3 cut(s) 1103, 1300, 3240
BfoI RGCGCY 1 cut(s) 3260
BfuI GTATCC 3 cut(s) 1154, 2681, 3591
BglI GCCNNNNNGGC 3 cut(s) 516, 3135, 4020
BglII AGATCT 1 cut(s) 3547
BlpI GCTNAGC 2 cut(s) 8, 3332
BmcAI AGTACT 2 cut(s) 990, 4161
Bme1390I CCNGG 7 cut(s) 515, 516, 1019, 2535, 2865, 2977, 3670
Bme18I GGWCC 3 cut(s) 268, 1178, 3030
BmeRI GACNNNNNGTC 1 cut(s) 3707
BmeT110I CYCGRG 1 cut(s) 514
BmgT120I GGNCC 6 cut(s) 268, 509, 728, 1178, 3030, 3128
BmiI GGNNCC 7 cut(s) 407, 511, 1180, 1784, 2759, 3526, 4013
BmrFI CCNGG 7 cut(s) 515, 516, 1019, 2535, 2865, 2977, 3670
BmrI ACTGGG 2 cut(s) 3033, 3394
BmtI GCTAGC 3 cut(s) 1394, 1458, 1889
BmuI ACTGGG 2 cut(s) 3033, 3394
BoxI GACNNNNGTC 1 cut(s) 3035
BpiI GAAGAC 1 cut(s) 3808
BplI GAGNNNNNCTC 2 cut(s) 2945, 2977
Bpu10I CCTNAGC 1 cut(s) 3610
Bpu1102I GCTNAGC 2 cut(s) 8, 3332
Bpu14I TTCGAA 1 cut(s) 3353
BpuEI CTTGAG 8 cut(s) 79, 242, 248, 851, 1217, 2160, 2291, 2492
BpuMI CCSGG 3 cut(s) 515, 516, 3670
Bsa29I ATCGAT 1 cut(s) 3159
BsaAI YACGTR 1 cut(s) 349
BsaBI GATNNNNATC 5 cut(s) 795, 801, 1781, 1820, 2801
BsaHI GRCGYC 1 cut(s) 59
BsaI GGTCTC 1 cut(s) 2882
BsaJI CCNNGG 4 cut(s) 513, 514, 2976, 3850
BsaWI WCCGGW 9 cut(s) 673, 932, 1114, 1599, 2188, 2493, 2645, 2760, 4067
BsaXI ACNNNNNCTCC 8 cut(s) 20, 50, 648, 678, 2148, 2178, 3744, 3774
Bsc4I CCNNNNNNNGG 6 cut(s) 521, 673, 906, 1426, 2963, 3629
Bse21I CCTNAGG 2 cut(s) 2772, 4183
Bse3DI GCAATG 2 cut(s) 1356, 3468
Bse8I GATNNNNATC 5 cut(s) 795, 801, 1781, 1820, 2801
BseAI TCCGGA 3 cut(s) 2188, 2493, 2645
BseBI CCWGG 4 cut(s) 1019, 2535, 2865, 2977
BseCI ATCGAT 1 cut(s) 3159
BseDI CCNNGG 4 cut(s) 513, 514, 2976, 3850
BseJI GATNNNNATC 5 cut(s) 795, 801, 1781, 1820, 2801
BseLI CCNNNNNNNGG 6 cut(s) 521, 673, 906, 1426, 2963, 3629
BseMI GCAATG 2 cut(s) 1356, 3468
BseMII CTCAG 8 cut(s) 22, 297, 1581, 1991, 2154, 2763, 3306, 3693
BseRI GAGGAG 5 cut(s) 22, 25, 632, 1139, 2706
BsgI GTGCAG 5 cut(s) 1562, 1670, 3025, 3327, 3638
Bsh1236I CGCG 5 cut(s) 91, 122, 733, 2570, 2679
BshNI GGYRCC 1 cut(s) 3524
BshVI ATCGAT 1 cut(s) 3159
BsiHKAI GWGCWC 1 cut(s) 1212
BsiHKCI CYCGRG 1 cut(s) 514
BslFI GGGAC 4 cut(s) 923, 1164, 1212, 1742
BslI CCNNNNNNNGG 6 cut(s) 521, 673, 906, 1426, 2963, 3629
BsmAI GTCTC 8 cut(s) 871, 1112, 1696, 1810, 2016, 2116, 2178, 2882
BsmBI CGTCTC 2 cut(s) 1112, 2016
BsmFI GGGAC 4 cut(s) 923, 1164, 1212, 1742
BsmI GAATGC 1 cut(s) 2089
Bso31I GGTCTC 1 cut(s) 2882
BsoBI CYCGRG 1 cut(s) 514
Bsp119I TTCGAA 1 cut(s) 3353
Bsp1286I GDGCHC 3 cut(s) 521, 1212, 2298
Bsp13I TCCGGA 3 cut(s) 2188, 2493, 2645
Bsp1407I TGTACA 1 cut(s) 3762
Bsp1720I GCTNAGC 2 cut(s) 8, 3332
Bsp19I CCATGG 1 cut(s) 3850
BspCNI CTCAG 8 cut(s) 21, 298, 1582, 1992, 2153, 2764, 3305, 3692
BspDI ATCGAT 1 cut(s) 3159
BspEI TCCGGA 3 cut(s) 2188, 2493, 2645
BspFNI CGCG 5 cut(s) 91, 122, 733, 2570, 2679
BspHI TCATGA 2 cut(s) 810, 2455
BspLI GGNNCC 7 cut(s) 407, 511, 1180, 1784, 2759, 3526, 4013
BspMAI CTGCAG 2 cut(s) 1107, 3244
BspOI GCTAGC 3 cut(s) 1394, 1458, 1889
BspPI GGATC 9 cut(s) 448, 798, 1304, 1777, 1790, 1841, 2276, 3525, 3727
BspQI GCTCTTC 2 cut(s) 12, 2286
BspT104I TTCGAA 1 cut(s) 3353
BspT107I GGYRCC 1 cut(s) 3524
BspTNI GGTCTC 1 cut(s) 2882
BsrBI CCGCTC 1 cut(s) 2004
BsrDI GCAATG 2 cut(s) 1356, 3468
BsrGI TGTACA 1 cut(s) 3762
BssECI CCNNGG 4 cut(s) 513, 514, 2976, 3850
BssNAI GTATAC 1 cut(s) 1758
BssNI GRCGYC 1 cut(s) 59
BssSI CACGAG 1 cut(s) 2019
BssT1I CCWWGG 1 cut(s) 3850
Bst1107I GTATAC 1 cut(s) 1758
Bst2BI CACGAG 1 cut(s) 2019
Bst2UI CCWGG 4 cut(s) 1019, 2535, 2865, 2977
Bst6I CTCTTC 5 cut(s) 12, 757, 2244, 2286, 3593
BstACI GRCGYC 1 cut(s) 59
BstAUI TGTACA 1 cut(s) 3762
BstBAI YACGTR 1 cut(s) 349
BstBI TTCGAA 1 cut(s) 3353
BstC8I GCNNGC 7 cut(s) 1110, 1392, 1456, 1887, 2677, 2696, 3412
BstDSI CCRYGG 1 cut(s) 3850
BstEII GGTNACC 1 cut(s) 2763
BstFNI CGCG 5 cut(s) 91, 122, 733, 2570, 2679
BstH2I RGCGCY 1 cut(s) 3260
BstHHI GCGC 5 cut(s) 93, 735, 2570, 2895, 3259
BstMAI GTCTC 8 cut(s) 871, 1112, 1696, 1810, 2016, 2116, 2178, 2882
BstNI CCWGG 4 cut(s) 1019, 2535, 2865, 2977
BstNSI RCATGY 2 cut(s) 2129, 2452
BstPAI GACNNNNGTC 1 cut(s) 3035
BstPI GGTNACC 1 cut(s) 2763
BstSCI CCNGG 7 cut(s) 513, 514, 1017, 2533, 2863, 2975, 3668
BstSFI CTRYAG 3 cut(s) 1103, 1300, 3240
BstUI CGCG 5 cut(s) 91, 122, 733, 2570, 2679
BstV2I GAAGAC 1 cut(s) 3808
BstX2I RGATCY 5 cut(s) 790, 1296, 1782, 3517, 3547
BstXI CCANNNNNNTGG 2 cut(s) 2587, 3975
BstYI RGATCY 5 cut(s) 790, 1296, 1782, 3517, 3547
BstZ17I GTATAC 1 cut(s) 1758
Bsu15I ATCGAT 1 cut(s) 3159
Bsu36I CCTNAGG 2 cut(s) 2772, 4183
BsuI GTATCC 3 cut(s) 1154, 2681, 3591
BsuTUI ATCGAT 1 cut(s) 3159
BtgI CCRYGG 1 cut(s) 3850
BtgZI GCGATG 3 cut(s) 348, 1398, 2102
BtsI GCAGTG 4 cut(s) 1649, 2733, 3621, 3870
Cac8I GCNNGC 7 cut(s) 1110, 1392, 1456, 1887, 2677, 2696, 3412
CciI TCATGA 2 cut(s) 810, 2455
CfoI GCGC 5 cut(s) 93, 735, 2570, 2895, 3259
Cfr13I GGNCC 6 cut(s) 268, 509, 728, 1178, 3030, 3128
Cfr9I CCCGGG 1 cut(s) 514
ClaI ATCGAT 1 cut(s) 3159
CseI GACGC 1 cut(s) 1046
DraI TTTAAA 1 cut(s) 3555
DriI GACNNNNNGTC 1 cut(s) 3707
EaeI YGGCCR 1 cut(s) 3867
Eam1104I CTCTTC 5 cut(s) 12, 757, 2244, 2286, 3593
Eam1105I GACNNNNNGTC 1 cut(s) 3707
EarI CTCTTC 5 cut(s) 12, 757, 2244, 2286, 3593
EciI GGCGGA 1 cut(s) 3898
Eco130I CCWWGG 1 cut(s) 3850
Eco147I AGGCCT 1 cut(s) 3317
Eco24I GRGCYC 2 cut(s) 521, 2298
Eco31I GGTCTC 1 cut(s) 2882
Eco32I GATATC 3 cut(s) 1008, 2707, 3944
Eco47I GGWCC 3 cut(s) 268, 1178, 3030
Eco47III AGCGCT 1 cut(s) 3258
Eco57I CTGAAG 2 cut(s) 1365, 1434
Eco81I CCTNAGG 2 cut(s) 2772, 4183
Eco88I CYCGRG 1 cut(s) 514
Eco91I GGTNACC 1 cut(s) 2763
EcoO109I RGGNCCY 2 cut(s) 509, 1178
EcoO65I GGTNACC 1 cut(s) 2763
EcoRI GAATTC 3 cut(s) 1048, 1354, 3963
EcoRII CCWGG 4 cut(s) 1017, 2533, 2863, 2975
EcoRV GATATC 3 cut(s) 1008, 2707, 3944
EcoT14I CCWWGG 1 cut(s) 3850
EcoT38I GRGCYC 2 cut(s) 521, 2298
ErhI CCWWGG 1 cut(s) 3850
Esp3I CGTCTC 2 cut(s) 1112, 2016
FalI AAGNNNNNCTT 4 cut(s) 975, 1007, 3243, 3275
FaqI GGGAC 4 cut(s) 923, 1164, 1212, 1742
FauI CCCGC 3 cut(s) 2563, 2792, 3456
FbaI TGATCA 1 cut(s) 3321
FblI GTMKAC 3 cut(s) 1068, 1524, 1757
FriOI GRGCYC 2 cut(s) 521, 2298
FspBI CTAG 5 cut(s) 827, 971, 1391, 1455, 1886
GlaI GCGC 5 cut(s) 92, 734, 2569, 2894, 3258
HaeII RGCGCY 1 cut(s) 3260
HgaI GACGC 1 cut(s) 1046
HhaI GCGC 5 cut(s) 93, 735, 2570, 2895, 3259
Hin1I GRCGYC 1 cut(s) 59
Hin6I GCGC 5 cut(s) 91, 733, 2568, 2893, 3257
HinP1I GCGC 5 cut(s) 91, 733, 2568, 2893, 3257
HindIII AAGCTT 2 cut(s) 885, 1476
HphI GGTGA 5 cut(s) 2055, 3016, 3820, 3835, 4082
Hpy99I CGWCG 1 cut(s) 1576
Hsp92I GRCGYC 1 cut(s) 59
HspAI GCGC 5 cut(s) 91, 733, 2568, 2893, 3257
Kpn2I TCCGGA 3 cut(s) 2188, 2493, 2645
Ksp22I TGATCA 1 cut(s) 3321
LguI GCTCTTC 2 cut(s) 12, 2286
LmnI GCTCC 7 cut(s) 1634, 1681, 2763, 2818, 2887, 3328, 4011
MaeI CTAG 5 cut(s) 827, 971, 1391, 1455, 1886
MbiI CCGCTC 1 cut(s) 2004
MfeI CAATTG 2 cut(s) 2907, 2988
MflI RGATCY 5 cut(s) 790, 1296, 1782, 3517, 3547
MhlI GDGCHC 3 cut(s) 521, 1212, 2298
MlsI TGGCCA 1 cut(s) 3869
MluNI TGGCCA 1 cut(s) 3869
MlyI GAGTC 6 cut(s) 50, 960, 1251, 2547, 2744, 2827
MmeI TCCRAC 6 cut(s) 265, 323, 2099, 2836, 3207, 3754
Mox20I TGGCCA 1 cut(s) 3869
MroI TCCGGA 3 cut(s) 2188, 2493, 2645
MroXI GAANNNNTTC 1 cut(s) 1517
MscI TGGCCA 1 cut(s) 3869
MslI CAYNNNNRTG 5 cut(s) 1592, 1814, 2945, 3482, 3973
Msp20I TGGCCA 1 cut(s) 3869
MspA1I CMGCKG 1 cut(s) 821
MspR9I CCNGG 7 cut(s) 515, 516, 1019, 2535, 2865, 2977, 3670
MunI CAATTG 2 cut(s) 2907, 2988
Mva1269I GAATGC 1 cut(s) 2089
MvaI CCWGG 4 cut(s) 1019, 2535, 2865, 2977
MvnI CGCG 5 cut(s) 91, 122, 733, 2570, 2679
NciI CCSGG 3 cut(s) 515, 516, 3670
NcoI CCATGG 1 cut(s) 3850
NheI GCTAGC 3 cut(s) 1390, 1454, 1885
NlaIV GGNNCC 7 cut(s) 407, 511, 1180, 1784, 2759, 3526, 4013
NmeAIII GCCGAG 2 cut(s) 38, 1359
NmuCI GTSAC 3 cut(s) 952, 1264, 3372
NspI RCATGY 2 cut(s) 2129, 2452
NspV TTCGAA 1 cut(s) 3353
OliI CACNNNNGTG 1 cut(s) 3973
PagI TCATGA 2 cut(s) 810, 2455
PceI AGGCCT 1 cut(s) 3317
PciI ACATGT 1 cut(s) 2125
PciSI GCTCTTC 2 cut(s) 12, 2286
PcsI WCGNNNNNNNCGW 3 cut(s) 3078, 3633, 3705
PctI GAATGC 1 cut(s) 2089
PdmI GAANNNNTTC 1 cut(s) 1517
PfeI GAWTC 5 cut(s) 1218, 2780, 3718, 4064, 4188
PflMI CCANNNNNTGG 1 cut(s) 1426
PleI GAGTC 6 cut(s) 49, 959, 1250, 2546, 2743, 2827
PpsI GAGTC 6 cut(s) 49, 959, 1250, 2546, 2743, 2827
Ppu21I YACGTR 1 cut(s) 349
PpuMI RGGWCCY 1 cut(s) 1178
PscI ACATGT 1 cut(s) 2125
PshAI GACNNNNGTC 1 cut(s) 3035
PshBI ATTAAT 4 cut(s) 210, 1091, 3177, 3267
Psp1406I AACGTT 3 cut(s) 186, 330, 3930
Psp5II RGGWCCY 1 cut(s) 1178
Psp6I CCWGG 4 cut(s) 1017, 2533, 2863, 2975
PspEI GGTNACC 1 cut(s) 2763
PspGI CCWGG 4 cut(s) 1017, 2533, 2863, 2975
PspN4I GGNNCC 7 cut(s) 407, 511, 1180, 1784, 2759, 3526, 4013
PspPI GGNCC 6 cut(s) 268, 509, 728, 1178, 3030, 3128
PspPPI RGGWCCY 1 cut(s) 1178
PstI CTGCAG 2 cut(s) 1107, 3244
PsuI RGATCY 5 cut(s) 790, 1296, 1782, 3517, 3547
RseI CAYNNNNRTG 5 cut(s) 1592, 1814, 2945, 3482, 3973
SapI GCTCTTC 2 cut(s) 12, 2286
Sau96I GGNCC 6 cut(s) 268, 509, 728, 1178, 3030, 3128
ScaI AGTACT 2 cut(s) 990, 4161
SchI GAGTC 6 cut(s) 50, 960, 1251, 2547, 2744, 2827
ScrFI CCNGG 7 cut(s) 515, 516, 1019, 2535, 2865, 2977, 3670
SduI GDGCHC 3 cut(s) 521, 1212, 2298
SfcI CTRYAG 3 cut(s) 1103, 1300, 3240
SfiI GGCCNNNNNGGCC 1 cut(s) 3135
SfuI TTCGAA 1 cut(s) 3353
SinI GGWCC 3 cut(s) 268, 1178, 3030
SmaI CCCGGG 1 cut(s) 516
SmiMI CAYNNNNRTG 5 cut(s) 1592, 1814, 2945, 3482, 3973
SmlI CTYRAG 8 cut(s) 94, 257, 263, 866, 1196, 2175, 2270, 2507
SmoI CTYRAG 8 cut(s) 94, 257, 263, 866, 1196, 2175, 2270, 2507
SseBI AGGCCT 1 cut(s) 3317
SspI AATATT 1 cut(s) 3380
SspMI CTAG 5 cut(s) 827, 971, 1391, 1455, 1886
StuI AGGCCT 1 cut(s) 3317
StyD4I CCNGG 7 cut(s) 513, 514, 1017, 2533, 2863, 2975, 3668
StyI CCWWGG 1 cut(s) 3850
TatI WGTACW 7 cut(s) 988, 2369, 3363, 3675, 3762, 3837, 4159
TauI GCSGC 5 cut(s) 631, 641, 733, 2007, 2306
TfiI GAWTC 5 cut(s) 1218, 2780, 3718, 4064, 4188
TseFI GTSAC 3 cut(s) 952, 1264, 3372
Tsp45I GTSAC 3 cut(s) 952, 1264, 3372
TspGWI ACGGA 7 cut(s) 618, 1795, 2091, 2400, 2900, 3765, 4067
TspMI CCCGGG 1 cut(s) 514
Van91I CCANNNNNTGG 1 cut(s) 1426
VpaK11BI GGWCC 3 cut(s) 268, 1178, 3030
VspI ATTAAT 4 cut(s) 210, 1091, 3177, 3267
XceI RCATGY 2 cut(s) 2129, 2452
XcmI CCANNNNNNNNNTGG 5 cut(s) 230, 467, 538, 1907, 2944
XmaI CCCGGG 1 cut(s) 514
XmiI GTMKAC 3 cut(s) 1068, 1524, 1757
XmnI GAANNNNTTC 1 cut(s) 1517
XspI CTAG 5 cut(s) 827, 971, 1391, 1455, 1886
ZraI GACGTC 1 cut(s) 60
ZrmI AGTACT 2 cut(s) 990, 4161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.