Rmu_ssc0000397.1_g000037
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000397.1
OG0000493
Physical Location & Seq
Forward (+)
154804 .. 158662
3859 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000397.1_g000037.1.cds

Sequence Viewer

Length: 2391 bp
atggaagctttctccaagtcttctcgtgaagaagacgatgaagaatctctcaaatgggctgctattgagagattgcctacttatttacgcataaggagaagtatactcgctgatcaagagaagggtaaagccagagaaattgatgtcaaggatcttggattactagagaggaagaatttgttggagcggttagtgaagattgctgaggaagataatgagaaattcttgttcaagctcagggaccgcatgaatagagttggacttgaatttccaacaactgaagtgcggttcgagcacttaaatgttgaagcagaagcttatgtaggaagcagggcattacctacaatgttcaacttctccattaatatgttagaggggctcttgaattgtgttcatcttcttcctagtagaaagaaacctttgccaatcctacatggtgtaagtggaacaatcaagccaagaagaatgacactgcttttaggccctccaggctccggaaaaaccacattgctattggcattggctggaaagctcggtaaagatcttaaaagatctggaagagttacctacaatggacttgggatggatgagtttgtaccagagaggacagcagcttacattagtcaatatgatcttcacataccggagttgactgtgagagaaactctagctttttcagcaagatgtcaaggggtcggaccacgttatgaaatgttagtagaactactaagaagagagaaggctgcaaatattatgccagattctgatcttgatgtctacatgaaggcagcagcactaaaaggacaggaaactactgtgattacagattatatactcaaggttttgggacttgaagtttgtgcagacaccatggtaggggatcaaatgagacgaggtatatctggtggccaaagaaagcgactcaccacaggggaaatgcttgttgggccagcaagagcactttttatggatgagatatcgactggcctggacagttcaacaacatttcagatagtaaattcactaagacaatccattcacattctcaatggaactgctgtaatctctctcctgcagccagcaccagaaacttatgatctctttgatgatataattctcctctcagatgggcacattgtgtatcaaggtcctcgtgaaaatgtgcttgagttctttgagtacatgggcttccgatgtccggagaggaaaggagtcgctgatttcctccaagaagtgacatcatggaaagaccaagagcaatattggactgataaagataagccttatagctttgtcacgtccaaggaattttctgtagcattgcagtcatttcacattggtcaagaactcggtgatgagcttgctagaccttttgacaagtctagaggaaaccctgcatctttagcaactgagaagtacggcgttagcaagaaggaactttttaaagcttgtctgtctagacattatttgctcatgaagaggaactcgtttgtctacattaccagaatgacaatgtttctcataactgcttttgtgacaatgacactattcctacggactgagatgcaccgggatacagtagaagatggtggcatttatatgggagctatgttcttcacaatgatggtaattatgttcaatggatactcagaccttgctatgactctcatgaaacttcctgtgttttacaagcaaagggacctgctcttctatcctgcttgggcatactctttaccaacagtgattataagaatccccatgacctttgtggaagtttccatttggatggccatcacttactacggtattggttatgatccaagcattggaaggttctgcaagcagttccttgtactagtgtgcattagccagatggcaaacggactgttccgattgataggtgcattaggaaggaacatgactgttgcaaacacatttggatctgttgctttactatgctgttttgttctgggtggctttatgttatcacgagaggagatgaagaactggttgttgtggggatattggctctcaccgatgacgtatggaacgaatgcaatggctgtcaatgagttttttggaaaaagttggagacatgttccacctaactcaacagaatcgttaggagttatggtcttgaagtctcgaggggtattcccagatgcaagttggtactggattggagtagtagctttatttggatattttcttgtgttcaacttcctttacactttggcacttcagcttctggaaccacttgataagcctcaggcagtattgtccaaagaggctttggcagtgaaacacgccatgaaaactggagagaccattgagctatcgccaataggaaacaattctattggtgggttcataaagctcattttatattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

796

Amino Acids

90.22

Weight (kDa)

8.15

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1748
Acc36I ACCTGC 1 cut(s) 1710
AccB7I CCANNNNNTGG 1 cut(s) 1826
AccBSI CCGCTC 1 cut(s) 187
AccI GTMKAC 3 cut(s) 103, 777, 1494
AccIII TCCGGA 2 cut(s) 494, 1198
AciI CCGC 3 cut(s) 187, 244, 286
AclWI GGATC 4 cut(s) 159, 888, 1811, 1948
AcoI YGGCCR 2 cut(s) 907, 1788
AcsI RAATTY 5 cut(s) 175, 221, 266, 1018, 1307
AcuI CTGAAG 2 cut(s) 300, 2225
AdeI CACNNNGTG 1 cut(s) 1138
AfaI GTAC 5 cut(s) 597, 1181, 1418, 1854, 2174
AfiI CCNNNNNNNGG 4 cut(s) 494, 876, 1198, 1826
AflIII ACRYGT 1 cut(s) 2095
AhlI ACTAGT 1 cut(s) 1855
AjiI CACGTC 1 cut(s) 1299
AjnI CCWGG 2 cut(s) 487, 987
AjuI GAANNNNNNNTTGG 4 cut(s) 164, 196, 927, 959
Alw21I GWGCWC 2 cut(s) 297, 961
Alw26I GTCTC 4 cut(s) 883, 2086, 2148, 2318
AlwI GGATC 4 cut(s) 159, 888, 1811, 1948
AlwNI CAGNNNCTG 2 cut(s) 764, 2248
Ama87I CYCGRG 1 cut(s) 2145
Aor13HI TCCGGA 2 cut(s) 494, 1198
AoxI GGCC 5 cut(s) 481, 907, 947, 985, 1788
ApeKI GCWGC 6 cut(s) 59, 611, 743, 788, 791, 1075
ApoI RAATTY 5 cut(s) 175, 221, 266, 1018, 1307
ArsI GACNNNNNNTTYG 2 cut(s) 840, 872
AseI ATTAAT 1 cut(s) 363
Asp700I GAANNNNTTC 1 cut(s) 2353
AspS9I GGNCC 6 cut(s) 241, 482, 698, 947, 1148, 1699
AsuC2I CCSGG 1 cut(s) 1571
AsuHPI GGTGA 3 cut(s) 916, 1364, 2025
AvaI CYCGRG 1 cut(s) 2145
AvaII GGWCC 4 cut(s) 241, 698, 1148, 1699
AxyI CCTNAGG 1 cut(s) 2268
BaeGI GKGCMC 1 cut(s) 1134
BalI TGGCCA 2 cut(s) 909, 1790
BanII GRGCYC 1 cut(s) 381
BarI GAAGNNNNNNTAC 2 cut(s) 1172, 1204
BauI CACGAG 3 cut(s) 24, 1152, 1989
BbsI GAAGAC 2 cut(s) 12, 39
Bbv12I GWGCWC 2 cut(s) 297, 961
BbvCI CCTCAGC 1 cut(s) 204
BbvI GCAGC 6 cut(s) 46, 623, 730, 800, 803, 1087
BccI CCATC 7 cut(s) 577, 1121, 1580, 1618, 1780, 1799, 1867
BceAI ACGGC 1 cut(s) 1435
BciT130I CCWGG 2 cut(s) 489, 989
BciVI GTATCC 2 cut(s) 1567, 1637
BclI TGATCA 1 cut(s) 112
BcnI CCSGG 1 cut(s) 1571
BcoDI GTCTC 4 cut(s) 883, 2086, 2148, 2318
BcuI ACTAGT 1 cut(s) 1855
BfaI CTAG 7 cut(s) 164, 405, 668, 1365, 1383, 1458, 1856
BfmI CTRYAG 2 cut(s) 1073, 1314
BfuAI ACCTGC 1 cut(s) 1710
BfuI GTATCC 2 cut(s) 1567, 1637
BglI GCCNNNNNGGC 1 cut(s) 489
BglII AGATCT 2 cut(s) 541, 551
BisI GCNGC 6 cut(s) 60, 612, 744, 789, 792, 1076
BlsI GCNGC 6 cut(s) 61, 613, 745, 790, 793, 1077
Bme1390I CCNGG 3 cut(s) 489, 989, 1571
Bme18I GGWCC 4 cut(s) 241, 698, 1148, 1699
BmeT110I CYCGRG 1 cut(s) 2145
BmgBI CACGTC 1 cut(s) 1299
BmgT120I GGNCC 6 cut(s) 241, 482, 698, 947, 1148, 1699
BmiI GGNNCC 4 cut(s) 242, 493, 1700, 2253
BmrFI CCNGG 3 cut(s) 489, 989, 1571
BmsI GCATC 3 cut(s) 1406, 1554, 2152
BpiI GAAGAC 2 cut(s) 12, 39
BplI GAGNNNNNCTC 2 cut(s) 649, 681
BpmI CTGGAG 2 cut(s) 471, 2340
Bpu10I CCTNAGC 2 cut(s) 204, 236
BpuEI CTTGAG 2 cut(s) 821, 1187
BpuMI CCSGG 1 cut(s) 1571
BsaBI GATNNNNATC 2 cut(s) 765, 1790
BsaI GGTCTC 1 cut(s) 2318
BsaJI CCNNGG 2 cut(s) 870, 1302
BsaWI WCCGGW 3 cut(s) 494, 643, 1198
BsaXI ACNNNNNCTCC 2 cut(s) 2118, 2148
Bsc4I CCNNNNNNNGG 4 cut(s) 494, 876, 1198, 1826
Bse1I ACTGG 4 cut(s) 988, 2012, 2180, 2323
Bse21I CCTNAGG 1 cut(s) 2268
Bse3DI GCAATG 3 cut(s) 506, 1319, 2064
Bse8I GATNNNNATC 2 cut(s) 765, 1790
BseAI TCCGGA 2 cut(s) 494, 1198
BseBI CCWGG 2 cut(s) 489, 989
BseDI CCNNGG 2 cut(s) 870, 1302
BseGI GGATG 4 cut(s) 588, 592, 976, 1791
BseJI GATNNNNATC 2 cut(s) 765, 1790
BseLI CCNNNNNNNGG 4 cut(s) 494, 876, 1198, 1826
BseMI GCAATG 3 cut(s) 506, 1319, 2064
BseMII CTCAG 7 cut(s) 195, 250, 1137, 1401, 1551, 1662, 2282
BseNI ACTGG 4 cut(s) 988, 2012, 2180, 2323
BseRI GAGGAG 2 cut(s) 1109, 2009
BseSI GKGCMC 1 cut(s) 1134
BseXI GCAGC 6 cut(s) 46, 623, 730, 800, 803, 1087
BsgI GTGCAG 1 cut(s) 882
BshFI GGCC 5 cut(s) 483, 909, 949, 987, 1790
BsiHKAI GWGCWC 2 cut(s) 297, 961
BsiHKCI CYCGRG 1 cut(s) 2145
BsiSI CCGG 4 cut(s) 495, 644, 1199, 1570
BslFI GGGAC 3 cut(s) 254, 861, 1712
BslI CCNNNNNNNGG 4 cut(s) 494, 876, 1198, 1826
BsmAI GTCTC 4 cut(s) 883, 2086, 2148, 2318
BsmBI CGTCTC 1 cut(s) 883
BsmFI GGGAC 3 cut(s) 254, 861, 1712
BsmI GAATGC 1 cut(s) 2059
BsnI GGCC 5 cut(s) 483, 909, 949, 987, 1790
Bso31I GGTCTC 1 cut(s) 2318
BsoBI CYCGRG 1 cut(s) 2145
Bsp1286I GDGCHC 4 cut(s) 297, 381, 961, 1134
Bsp13I TCCGGA 2 cut(s) 494, 1198
Bsp19I CCATGG 1 cut(s) 870
BspACI CCGC 3 cut(s) 187, 244, 286
BspANI GGCC 5 cut(s) 483, 909, 949, 987, 1790
BspCNI CTCAG 7 cut(s) 196, 249, 1136, 1402, 1552, 1661, 2281
BspEI TCCGGA 2 cut(s) 494, 1198
BspHI TCATGA 2 cut(s) 1473, 1668
BspLI GGNNCC 4 cut(s) 242, 493, 1700, 2253
BspMAI CTGCAG 1 cut(s) 1077
BspMI ACCTGC 1 cut(s) 1710
BspPI GGATC 4 cut(s) 159, 888, 1811, 1948
BspQI GCTCTTC 1 cut(s) 1712
BspTNI GGTCTC 1 cut(s) 2318
BsrBI CCGCTC 1 cut(s) 187
BsrDI GCAATG 3 cut(s) 506, 1319, 2064
BsrI ACTGG 4 cut(s) 988, 2012, 2180, 2323
BssECI CCNNGG 2 cut(s) 870, 1302
BssNAI GTATAC 1 cut(s) 104
BssSI CACGAG 3 cut(s) 24, 1152, 1989
BssT1I CCWWGG 2 cut(s) 870, 1302
Bst1107I GTATAC 1 cut(s) 104
Bst2BI CACGAG 3 cut(s) 24, 1152, 1989
Bst2UI CCWGG 2 cut(s) 489, 989
Bst4CI ACNGT 8 cut(s) 655, 817, 995, 1579, 1741, 1805, 1887, 1924
Bst6I CTCTTC 4 cut(s) 553, 727, 1472, 1712
BstC8I GCNNGC 4 cut(s) 951, 1080, 1362, 1841
BstDEI CTNAG 9 cut(s) 204, 236, 728, 1025, 1123, 1410, 1560, 1648, 2268
BstDSI CCRYGG 1 cut(s) 870
BstF5I GGATG 4 cut(s) 588, 592, 976, 1791
BstMAI GTCTC 4 cut(s) 883, 2086, 2148, 2318
BstMWI GCNNNNNNNGC 5 cut(s) 292, 489, 677, 946, 1403
BstNI CCWGG 2 cut(s) 489, 989
BstNSI RCATGY 1 cut(s) 2099
BstSCI CCNGG 3 cut(s) 487, 987, 1569
BstSFI CTRYAG 2 cut(s) 1073, 1314
BstSLI GKGCMC 1 cut(s) 1134
BstV1I GCAGC 6 cut(s) 46, 623, 730, 800, 803, 1087
BstV2I GAAGAC 2 cut(s) 12, 39
BstX2I RGATCY 4 cut(s) 151, 541, 551, 1940
BstXI CCANNNNNNTGG 1 cut(s) 1786
BstYI RGATCY 4 cut(s) 151, 541, 551, 1940
BstZ17I GTATAC 1 cut(s) 104
Bsu36I CCTNAGG 1 cut(s) 2268
BsuI GTATCC 2 cut(s) 1567, 1637
BsuRI GGCC 5 cut(s) 483, 909, 949, 987, 1790
BtgI CCRYGG 1 cut(s) 870
BtrI CACGTC 1 cut(s) 1299
BtsCI GGATG 4 cut(s) 588, 592, 976, 1791
BtsI GCAGTG 2 cut(s) 470, 2304
BtsIMutI CAGTG 3 cut(s) 470, 1746, 2304
BveI ACCTGC 1 cut(s) 1710
Cac8I GCNNGC 4 cut(s) 951, 1080, 1362, 1841
CaiI CAGNNNCTG 2 cut(s) 764, 2248
CciI TCATGA 2 cut(s) 1473, 1668
Cfr13I GGNCC 6 cut(s) 241, 482, 698, 947, 1148, 1699
Csp6I GTAC 5 cut(s) 596, 1180, 1417, 1853, 2173
CviQI GTAC 5 cut(s) 596, 1180, 1417, 1853, 2173
DdeI CTNAG 9 cut(s) 204, 236, 728, 1025, 1123, 1410, 1560, 1648, 2268
DraI TTTAAA 1 cut(s) 1444
DraIII CACNNNGTG 1 cut(s) 1138
EaeI YGGCCR 2 cut(s) 907, 1788
Eam1104I CTCTTC 4 cut(s) 553, 727, 1472, 1712
EarI CTCTTC 4 cut(s) 553, 727, 1472, 1712
Eco130I CCWWGG 2 cut(s) 870, 1302
Eco24I GRGCYC 1 cut(s) 381
Eco31I GGTCTC 1 cut(s) 2318
Eco32I GATATC 1 cut(s) 978
Eco47I GGWCC 4 cut(s) 241, 698, 1148, 1699
Eco57I CTGAAG 2 cut(s) 300, 2225
Eco81I CCTNAGG 1 cut(s) 2268
Eco88I CYCGRG 1 cut(s) 2145
EcoO109I RGGNCCY 3 cut(s) 482, 1148, 1699
EcoRII CCWGG 2 cut(s) 487, 987
EcoRV GATATC 1 cut(s) 978
EcoT14I CCWWGG 2 cut(s) 870, 1302
EcoT38I GRGCYC 1 cut(s) 381
ErhI CCWWGG 2 cut(s) 870, 1302
Esp3I CGTCTC 1 cut(s) 883
FaqI GGGAC 3 cut(s) 254, 861, 1712
FbaI TGATCA 1 cut(s) 112
FblI GTMKAC 3 cut(s) 103, 777, 1494
Fnu4HI GCNGC 6 cut(s) 60, 612, 744, 789, 792, 1076
FokI GGATG 4 cut(s) 595, 599, 983, 1798
FriOI GRGCYC 1 cut(s) 381
Fsp4HI GCNGC 6 cut(s) 60, 612, 744, 789, 792, 1076
FspBI CTAG 7 cut(s) 164, 405, 668, 1365, 1383, 1458, 1856
GluI GCNGC 6 cut(s) 60, 612, 744, 789, 792, 1076
GsuI CTGGAG 2 cut(s) 471, 2340
HaeIII GGCC 5 cut(s) 483, 909, 949, 987, 1790
HapII CCGG 4 cut(s) 495, 644, 1199, 1570
HincII GTYRAC 1 cut(s) 651
HindII GTYRAC 1 cut(s) 651
HindIII AAGCTT 3 cut(s) 6, 315, 1446
HinfI GANTC 7 cut(s) 44, 761, 921, 1212, 1663, 1752, 2117
HpaII CCGG 4 cut(s) 495, 644, 1199, 1570
HphI GGTGA 3 cut(s) 916, 1364, 2025
Hpy166II GTNNAC 4 cut(s) 104, 651, 778, 1495
Hpy188I TCNGA 7 cut(s) 698, 766, 1011, 1126, 1193, 1651, 1892
Hpy8I GTNNAC 4 cut(s) 104, 651, 778, 1495
HpyAV CCTTC 6 cut(s) 115, 733, 778, 1426, 1824, 1905
HpyCH4III ACNGT 8 cut(s) 655, 817, 995, 1579, 1741, 1805, 1887, 1924
HpyCH4IV ACGT 3 cut(s) 703, 1298, 2042
HpyF10VI GCNNNNNNNGC 5 cut(s) 292, 489, 677, 946, 1403
HpyF3I CTNAG 9 cut(s) 204, 236, 728, 1025, 1123, 1410, 1560, 1648, 2268
HpySE526I ACGT 3 cut(s) 703, 1298, 2042
Kpn2I TCCGGA 2 cut(s) 494, 1198
Ksp22I TGATCA 1 cut(s) 112
LguI GCTCTTC 1 cut(s) 1712
LmnI GCTCC 3 cut(s) 184, 497, 1604
Lsp1109I GCAGC 6 cut(s) 46, 623, 730, 800, 803, 1087
LweI GCATC 3 cut(s) 1406, 1554, 2152
MaeI CTAG 7 cut(s) 164, 405, 668, 1365, 1383, 1458, 1856
MaeII ACGT 3 cut(s) 703, 1298, 2042
MaeIII GTNAC 4 cut(s) 562, 1234, 1294, 1534
MbiI CCGCTC 1 cut(s) 187
MflI RGATCY 4 cut(s) 151, 541, 551, 1940
MhlI GDGCHC 4 cut(s) 297, 381, 961, 1134
MlsI TGGCCA 2 cut(s) 909, 1790
MluNI TGGCCA 2 cut(s) 909, 1790
MlyI GAGTC 3 cut(s) 915, 1221, 1657
MmeI TCCRAC 5 cut(s) 162, 238, 296, 676, 2069
Mox20I TGGCCA 2 cut(s) 909, 1790
MroI TCCGGA 2 cut(s) 494, 1198
MroXI GAANNNNTTC 1 cut(s) 2353
MscI TGGCCA 2 cut(s) 909, 1790
MseI TTAA 4 cut(s) 299, 363, 546, 1443
MslI CAYNNNNRTG 5 cut(s) 300, 365, 1598, 1622, 1784
Msp20I TGGCCA 2 cut(s) 909, 1790
MspI CCGG 4 cut(s) 495, 644, 1199, 1570
MspR9I CCNGG 3 cut(s) 489, 989, 1571
Mva1269I GAATGC 1 cut(s) 2059
MvaI CCWGG 2 cut(s) 489, 989
MwoI GCNNNNNNNGC 5 cut(s) 292, 489, 677, 946, 1403
NciI CCSGG 1 cut(s) 1571
NcoI CCATGG 1 cut(s) 870
NlaIV GGNNCC 4 cut(s) 242, 493, 1700, 2253
NmuCI GTSAC 3 cut(s) 1234, 1294, 1534
NspI RCATGY 1 cut(s) 2099
PaeR7I CTCGAG 1 cut(s) 2145
PagI TCATGA 2 cut(s) 1473, 1668
PciI ACATGT 1 cut(s) 2095
PciSI GCTCTTC 1 cut(s) 1712
PcsI WCGNNNNNNNCGW 1 cut(s) 2048
PctI GAATGC 1 cut(s) 2059
PdmI GAANNNNTTC 1 cut(s) 2353
PfeI GAWTC 4 cut(s) 44, 761, 1752, 2117
PflMI CCANNNNNTGG 1 cut(s) 1826
PkrI GCNGC 6 cut(s) 61, 613, 745, 790, 793, 1077
PleI GAGTC 3 cut(s) 915, 1220, 1657
PpsI GAGTC 3 cut(s) 915, 1220, 1657
PpuMI RGGWCCY 2 cut(s) 1148, 1699
PscI ACATGT 1 cut(s) 2095
PshBI ATTAAT 1 cut(s) 363
PsiI TTATAA 1 cut(s) 1748
Psp5II RGGWCCY 2 cut(s) 1148, 1699
Psp6I CCWGG 2 cut(s) 487, 987
PspGI CCWGG 2 cut(s) 487, 987
PspN4I GGNNCC 4 cut(s) 242, 493, 1700, 2253
PspPI GGNCC 6 cut(s) 241, 482, 698, 947, 1148, 1699
PspPPI RGGWCCY 2 cut(s) 1148, 1699
PstI CTGCAG 1 cut(s) 1077
PstNI CAGNNNCTG 2 cut(s) 764, 2248
PsuI RGATCY 4 cut(s) 151, 541, 551, 1940
RsaI GTAC 5 cut(s) 597, 1181, 1418, 1854, 2174
RsaNI GTAC 5 cut(s) 596, 1180, 1417, 1853, 2173
RseI CAYNNNNRTG 5 cut(s) 300, 365, 1598, 1622, 1784
SapI GCTCTTC 1 cut(s) 1712
SaqAI TTAA 4 cut(s) 299, 363, 546, 1443
SatI GCNGC 6 cut(s) 60, 612, 744, 789, 792, 1076
Sau96I GGNCC 6 cut(s) 241, 482, 698, 947, 1148, 1699
SchI GAGTC 3 cut(s) 915, 1221, 1657
ScrFI CCNGG 3 cut(s) 489, 989, 1571
SduI GDGCHC 4 cut(s) 297, 381, 961, 1134
SfaNI GCATC 3 cut(s) 1406, 1554, 2152
SfcI CTRYAG 2 cut(s) 1073, 1314
Sfr274I CTCGAG 1 cut(s) 2145
SinI GGWCC 4 cut(s) 241, 698, 1148, 1699
SlaI CTCGAG 1 cut(s) 2145
SmiMI CAYNNNNRTG 5 cut(s) 300, 365, 1598, 1622, 1784
SmlI CTYRAG 3 cut(s) 836, 1166, 2145
SmoI CTYRAG 3 cut(s) 836, 1166, 2145
SpeI ACTAGT 1 cut(s) 1855
SsiI CCGC 3 cut(s) 187, 244, 286
SspI AATATT 2 cut(s) 751, 1262
SspMI CTAG 7 cut(s) 164, 405, 668, 1365, 1383, 1458, 1856
StyD4I CCNGG 3 cut(s) 487, 987, 1569
StyI CCWWGG 2 cut(s) 870, 1302
TaaI ACNGT 8 cut(s) 655, 817, 995, 1579, 1741, 1805, 1887, 1924
TaiI ACGT 3 cut(s) 706, 1301, 2045
TaqI TCGA 3 cut(s) 291, 980, 2146
TatI WGTACW 2 cut(s) 1179, 1852
TfiI GAWTC 4 cut(s) 44, 761, 1752, 2117
Tru1I TTAA 4 cut(s) 299, 363, 546, 1443
Tru9I TTAA 4 cut(s) 299, 363, 546, 1443
TscAI CASTG 3 cut(s) 477, 1746, 2304
TseFI GTSAC 3 cut(s) 1234, 1294, 1534
TseI GCWGC 6 cut(s) 59, 611, 743, 788, 791, 1075
Tsp45I GTSAC 3 cut(s) 1234, 1294, 1534
TspGWI ACGGA 2 cut(s) 1570, 1896
TspRI CASTG 3 cut(s) 477, 1746, 2304
Van91I CCANNNNNTGG 1 cut(s) 1826
VpaK11BI GGWCC 4 cut(s) 241, 698, 1148, 1699
VspI ATTAAT 1 cut(s) 363
XapI RAATTY 5 cut(s) 175, 221, 266, 1018, 1307
XbaI TCTAGA 2 cut(s) 1382, 1457
XceI RCATGY 1 cut(s) 2099
XcmI CCANNNNNNNNNTGG 4 cut(s) 511, 1765, 2166, 2290
XhoI CTCGAG 1 cut(s) 2145
XmiI GTMKAC 3 cut(s) 103, 777, 1494
XmnI GAANNNNTTC 1 cut(s) 2353
XspI CTAG 7 cut(s) 164, 405, 668, 1365, 1383, 1458, 1856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.