RchiOBHm_Chr2g0145991

Aspartokinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
63757127 .. 63758953
1827 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51579

Sequence Viewer

Length: 171 bp
ATGCTCCATGTTCTCTGCTTGGAATTACTTGACCATGTTGTGGAAGAACTGGAGAAAATTGCTGTTGTCAATCTCCTTCAGCACCAATCAATAATATCTCTCATTGGAAATGTGCAAAAATCATCACTAATATTAGAGAAGTTGTTGTACTGTGTTTTGCCAAGTACTTAG

Protein Analysis

56

Amino Acids

6.29

Weight (kDa)

5.36

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 40
AcuI CTGAAG 1 cut(s) 62
AfaI GTAC 2 cut(s) 149, 166
AfiI CCNNNNNNNGG 1 cut(s) 40
BarI GAAGNNNNNNTAC 2 cut(s) 131, 163
BmcAI AGTACT 1 cut(s) 166
BpmI CTGGAG 1 cut(s) 71
Bsc4I CCNNNNNNNGG 1 cut(s) 40
Bse1I ACTGG 1 cut(s) 54
BseLI CCNNNNNNNGG 1 cut(s) 40
BseNI ACTGG 1 cut(s) 54
BslI CCNNNNNNNGG 1 cut(s) 40
BsrI ACTGG 1 cut(s) 54
Bst4CI ACNGT 1 cut(s) 152
BstDEI CTNAG 1 cut(s) 168
Csp6I GTAC 2 cut(s) 148, 165
CviAII CATG 2 cut(s) 8, 35
CviQI GTAC 2 cut(s) 148, 165
DdeI CTNAG 1 cut(s) 168
Eco57I CTGAAG 1 cut(s) 62
FaeI CATG 2 cut(s) 11, 38
FaiI YATR 2 cut(s) 9, 36
FatI CATG 2 cut(s) 7, 34
FspEI CC 8 cut(s) 5, 20, 26, 35, 47, 89, 90, 98
GsuI CTGGAG 1 cut(s) 71
Hin1II CATG 2 cut(s) 11, 38
HpyAV CCTTC 1 cut(s) 86
HpyCH4III ACNGT 1 cut(s) 152
HpyCH4V TGCA 1 cut(s) 115
HpyF3I CTNAG 1 cut(s) 168
Hsp92II CATG 2 cut(s) 11, 38
LmnI GCTCC 1 cut(s) 9
LpnPI CCDG 1 cut(s) 35
MboII GAAGA 1 cut(s) 56
MluCI AATT 2 cut(s) 23, 57
NlaIII CATG 2 cut(s) 11, 38
PflMI CCANNNNNTGG 1 cut(s) 40
RsaI GTAC 2 cut(s) 149, 166
RsaNI GTAC 2 cut(s) 148, 165
ScaI AGTACT 1 cut(s) 166
SgeI CNNG 5 cut(s) 20, 31, 41, 47, 62
Sse9I AATT 2 cut(s) 23, 57
SspI AATATT 1 cut(s) 132
TaaI ACNGT 1 cut(s) 152
TasI AATT 2 cut(s) 23, 57
TatI WGTACW 2 cut(s) 147, 164
Van91I CCANNNNNTGG 1 cut(s) 40
ZrmI AGTACT 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.