Rh6DG395900
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
58694629 .. 58701434
6806 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG395900.1

Sequence Viewer

Length: 2448 bp
ATGGAAGTTTTCACCAAGTCTTCTCGTGAAGAAGACGATGAAGAAGCTCTGAAATGGGCTGCTATTGAGAGATTGCCAACTTACTTGCGCATAAGGAGAGGCATACTCACGGACCAAGACGCGGGTAAAGCCAGAGAAATTGATGTCAAAAATTTAGGACTTTTAGAAAGGAGGAATTTGCTGGAGAGGCTGGTGAAGATTGCAGATGAAGATAATGAGAAGTTCTTGTTCAAGCTCAGGGACCGCATGGATAGAGTTGGACTTGAATTTCCAACAACTGAGGTGCGGTTTGAGCATTTAAGTGTCGAAGCAGAAGCTTATGTAGGGAGTAGGGCATTACCTACAATGCTCAACTTCTCCATTAACATCTTAGAGGCAGCTGCACTAGAAGGACAGGAAACCAATGTAATTACAGATTATATACTCAAGGTTTCTACCAACTCAAAAGAACCATTAGGAATAATGGTCTTGAATTCTCGAGGGGTGTTCCCAGAAGCACGTTGGTACTGGATTGGAGTAGTAGATTTATTTGGATTTATTCTTCTATTCAACTTCCTTTTCATTTTGGCACTTCAGTATCTTGAACCTCTTGATAAGCCTCAGGCAGTACTTTCCAAAGAGGCCTTGGCAAAGAAACAAGCCACTGAAACTGGAGATGCCATTGAATTATTGTCAACAGGAAAGAGCTATATTGGTGCAGCTAATGAAAGACTAGACAATGTGTCAGTCAATCTTACTGGCCAGCGAGGAATGGTTCTTCCTTTTGAACCCCTCACAATTACATTTGATGAAATCAGATATGCAGTTGACATGCCACAGGAAATGAAAGCTCAAGGCATAACAGAGAATCGGTTAGAACTTCTGAAGGGTGTAAGTGGTGCTTTTAGGCCTGGAGTCCTAACAGCTCTAATGGGGGTCAGTGGCGCTGGAAAGACTACTCTAATGGATGTCCTGGCAGGAAGGAAAACTGGTGGACATATTGAAGGAAACATTACAATTTCTGGCTATCCAAAGAAGCAAGAAACATTTGCTCGTATATCTGGATATTGTGAGCAAACGGATATGCACTCTCCACATGTTACAGTCTATGAATCTTTGGTTTATTCTGCTTGGCTCCGGTTGCCCCCTGAGGTTGATTCCCCCACCAGAAAGATGTTTATTGAGGAAGTCATGGAACTTGTGGAACTGACCCCAATAAGAGATGCACTTGTTGGATTGCCTGGAGTGAATGGGCTCTCAACTGAGCAGCGCAAAAGACTAACAATCGCAGTAGAGCTTGTTGCCAACCCATCCATAATATTTATGGATGAGCCAACCTCTGGTCTTGATGCCAGGGCTGCAGCAATTGTAATGAGAACTGTGAGGAATACAATGAACACCGGGAGAACTGTAGTCTGCACCATCCACCAGCCAAGCATTGATATATTTGATGCTTTTGATGAGATGCTACTTTTGAAATGGGGAGGAGAAGAAATATATGTTGGTCCTTTAGGCCACCAGTCCTCTCAGTTGATCGAATACTTTGAGGGGATCAGTGGAGTTCCTAAAATGAATGATGGTTACAATCCTGCAACTTGGATGTTAGAGGTTACTTCTGCAGCACAAGAATCAACTCTTGGGGTCAATTTCACCGACATATACAAGAACTCAGAAATGTACAGGAGAAACAAGGAATTGATCAAGGAACTAAGTACTCCACCAGAAAATTCAGTAGAATTTCACTTCACAACACAGTATTCTCAGTCCTTCTTTACCCAATGCATAACTTGCCTATGGAAACAACATCTGTCTTACTGGAGAAACCCGCCATACAGTGCAGCGAGACTTATTTACACAACTATGATGGCTATAGTATTTGGGATATTATTCTGGGGTCTTGGCTCCAAAAGGCAAAAGCAACAAGATCTTTTCAATGTATTAGGCTCTATGTATTCTGCCATACTCTTCATTGGGATACAAAACGCCTCATCAGTGCAGCCAGTTATAGCGATTGAGAGGGTAGTCTTTTACAGAGAAAGGGCAGCTGGAATGTACTCTGCTTTTCCATATGCATTTGGACAGGTTGTCATTGAGATACCATACACTTTGATCCAAACCACATTATATGTGGTTATAGTATACACCATGATCGGATATGATTGGACGGTCAGCAAGTTTGTCTGGTATTTTTTCTTCATGTATTTCAGCTTCTTATACTACACATTATATGGTATGATGATTGTGGCCAGTACTCCCAACACTATGGTTGCTGCTGTGCTTTCCTCATCCTTCTACCCGTTATGGAACGTCTTTTCTGGATTTATCATTCCCAAAACAAGAATTCCAATATGGTGGAGATGGTTCTATTGGTTGTGCCCGATTTCTTGGACCTTATACGGATTGATTGCTTCGCAGTTTGGAGACATTAAGGACGCACTTGAATCTGGCAAAACTGGAGAATTTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

815

Amino Acids

92.46

Weight (kDa)

5.33

Isoelectric Point (pI)

41.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 69 - 119 8.9e-08 ABC-transporter N-terminal
PDR_assoc PF08370 146 - 203 2.5e-25 Plant PDR ABC transporter associated
ABC_tran PF00005 288 - 440 4.4e-21 ABC transporter
ABC2_membrane PF01061 585 - 799 4.2e-60 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 89
AccB7I CCANNNNNTGG 1 cut(s) 1319
AccI GTMKAC 1 cut(s) 2118
AccII CGCG 1 cut(s) 122
AciI CCGC 4 cut(s) 122, 244, 286, 1805
AclWI GGATC 2 cut(s) 1538, 2083
AcoI YGGCCR 2 cut(s) 739, 2223
AcsI RAATTY 8 cut(s) 151, 175, 266, 472, 1705, 1715, 2319, 2438
AcuI CTGAAG 2 cut(s) 557, 884
AfaI GTAC 6 cut(s) 506, 609, 1658, 1693, 2033, 2230
AfiI CCNNNNNNNGG 2 cut(s) 121, 1319
AflIII ACRYGT 1 cut(s) 1075
AhdI GACNNNNNGTC 2 cut(s) 721, 2063
AjnI CCWGG 4 cut(s) 889, 951, 1219, 1331
AjuI GAANNNNNNNTTGG 4 cut(s) 1464, 1496, 1599, 1631
Alw26I GTCTC 2 cut(s) 1816, 2394
AlwI GGATC 2 cut(s) 1538, 2083
Ama87I CYCGRG 1 cut(s) 477
AoxI GGCC 5 cut(s) 621, 739, 887, 1492, 2223
ApoI RAATTY 8 cut(s) 151, 175, 266, 472, 1705, 1715, 2319, 2438
AspLEI GCGC 3 cut(s) 90, 926, 1251
AspS9I GGNCC 4 cut(s) 112, 241, 1484, 2367
AsuC2I CCSGG 1 cut(s) 1381
AsuHPI GGTGA 3 cut(s) 4, 205, 1621
AvaI CYCGRG 1 cut(s) 477
AvaII GGWCC 4 cut(s) 112, 241, 1484, 2367
AxyI CCTNAGG 2 cut(s) 600, 1128
BaeGI GKGCMC 1 cut(s) 2357
BaeI ACNNNNGTAYC 2 cut(s) 560, 593
BalI TGGCCA 2 cut(s) 741, 2225
BanII GRGCYC 1 cut(s) 1236
BarI GAAGNNNNNNTAC 4 cut(s) 2156, 2171, 2188, 2203
BauI CACGAG 1 cut(s) 24
BbsI GAAGAC 2 cut(s) 12, 39
BccI CCATC 5 cut(s) 1297, 1409, 1550, 1837, 2331
BciT130I CCWGG 4 cut(s) 891, 953, 1221, 1333
BciVI GTATCC 1 cut(s) 1947
BclI TGATCA 1 cut(s) 1677
BcnI CCSGG 1 cut(s) 1381
BcoDI GTCTC 2 cut(s) 1816, 2394
BfaI CTAG 2 cut(s) 386, 713
BfmI CTRYAG 4 cut(s) 1338, 1389, 1596, 1848
BfoI RGCGCY 1 cut(s) 927
BfuI GTATCC 1 cut(s) 1947
BglII AGATCT 1 cut(s) 1903
BmcAI AGTACT 3 cut(s) 609, 1693, 2230
Bme1390I CCNGG 5 cut(s) 891, 953, 1221, 1333, 1381
Bme18I GGWCC 4 cut(s) 112, 241, 1484, 2367
BmeRI GACNNNNNGTC 2 cut(s) 721, 2063
BmeT110I CYCGRG 1 cut(s) 477
BmgT120I GGNCC 4 cut(s) 112, 241, 1484, 2367
BmiI GGNNCC 3 cut(s) 242, 1115, 1882
BmrFI CCNGG 5 cut(s) 891, 953, 1221, 1333, 1381
BmsI GCATC 5 cut(s) 646, 1192, 1318, 1420, 1434
BpiI GAAGAC 2 cut(s) 12, 39
BplI GAGNNNNNCTC 4 cut(s) 90, 122, 1301, 1333
BpmI CTGGAG 5 cut(s) 203, 672, 912, 1242, 1816
Bpu10I CCTNAGC 1 cut(s) 236
BpuEI CTTGAG 2 cut(s) 410, 816
BpuMI CCSGG 1 cut(s) 1381
BsaJI CCNNGG 2 cut(s) 624, 1332
BsaWI WCCGGW 1 cut(s) 1116
Bsc4I CCNNNNNNNGG 2 cut(s) 121, 1319
Bse1I ACTGG 9 cut(s) 512, 655, 742, 973, 1498, 1799, 1979, 2226, 2437
Bse21I CCTNAGG 2 cut(s) 600, 1128
BseBI CCWGG 4 cut(s) 891, 953, 1221, 1333
BseDI CCNNGG 2 cut(s) 624, 1332
BseGI GGATG 6 cut(s) 952, 1289, 1312, 1401, 1584, 2264
BseLI CCNNNNNNNGG 2 cut(s) 121, 1319
BseMII CTCAG 8 cut(s) 250, 270, 614, 1119, 1233, 1520, 1662, 1754
BseNI ACTGG 9 cut(s) 512, 655, 742, 973, 1498, 1799, 1979, 2226, 2437
BseRI GAGGAG 1 cut(s) 1479
BseSI GKGCMC 1 cut(s) 2357
BsgI GTGCAG 5 cut(s) 366, 717, 1381, 1836, 1994
Bsh1236I CGCG 1 cut(s) 122
BshFI GGCC 5 cut(s) 623, 741, 889, 1494, 2225
BsiHKCI CYCGRG 1 cut(s) 477
BsiSI CCGG 2 cut(s) 1117, 1380
BslFI GGGAC 1 cut(s) 254
BslI CCNNNNNNNGG 2 cut(s) 121, 1319
BsmAI GTCTC 2 cut(s) 1816, 2394
BsmFI GGGAC 1 cut(s) 254
BsnI GGCC 5 cut(s) 623, 741, 889, 1494, 2225
BsoBI CYCGRG 1 cut(s) 477
Bsp1286I GDGCHC 2 cut(s) 1236, 2357
Bsp1407I TGTACA 1 cut(s) 1656
Bsp143I GATC 6 cut(s) 1512, 1530, 1677, 1903, 2088, 2127
BspACI CCGC 4 cut(s) 122, 244, 286, 1805
BspANI GGCC 5 cut(s) 623, 741, 889, 1494, 2225
BspCNI CTCAG 8 cut(s) 249, 271, 613, 1120, 1234, 1519, 1661, 1753
BspFNI CGCG 1 cut(s) 122
BspLI GGNNCC 3 cut(s) 242, 1115, 1882
BspMAI CTGCAG 2 cut(s) 1342, 1600
BspPI GGATC 2 cut(s) 1538, 2083
BsrGI TGTACA 1 cut(s) 1656
BsrI ACTGG 9 cut(s) 512, 655, 742, 973, 1498, 1799, 1979, 2226, 2437
BssECI CCNNGG 2 cut(s) 624, 1332
BssMI GATC 6 cut(s) 1512, 1530, 1677, 1903, 2088, 2127
BssNAI GTATAC 1 cut(s) 2119
BssSI CACGAG 1 cut(s) 24
BssT1I CCWWGG 1 cut(s) 624
Bst1107I GTATAC 1 cut(s) 2119
Bst2BI CACGAG 1 cut(s) 24
Bst2UI CCWGG 4 cut(s) 891, 953, 1221, 1333
Bst4CI ACNGT 6 cut(s) 1084, 1360, 1390, 1734, 1814, 2146
Bst6I CTCTTC 1 cut(s) 1949
BstAPI GCANNNNNTGC 1 cut(s) 1767
BstAUI TGTACA 1 cut(s) 1656
BstC8I GCNNGC 1 cut(s) 743
BstF5I GGATG 6 cut(s) 952, 1289, 1312, 1401, 1584, 2264
BstFNI CGCG 1 cut(s) 122
BstH2I RGCGCY 1 cut(s) 927
BstHHI GCGC 3 cut(s) 90, 926, 1251
BstKTI GATC 6 cut(s) 1515, 1533, 1680, 1906, 2091, 2130
BstMAI GTCTC 2 cut(s) 1816, 2394
BstMBI GATC 6 cut(s) 1512, 1530, 1677, 1903, 2088, 2127
BstMWI GCNNNNNNNGC 6 cut(s) 128, 187, 292, 1120, 1337, 1767
BstNI CCWGG 4 cut(s) 891, 953, 1221, 1333
BstNSI RCATGY 2 cut(s) 814, 1079
BstSCI CCNGG 5 cut(s) 889, 951, 1219, 1331, 1379
BstSFI CTRYAG 4 cut(s) 1338, 1389, 1596, 1848
BstSLI GKGCMC 1 cut(s) 2357
BstUI CGCG 1 cut(s) 122
BstV2I GAAGAC 2 cut(s) 12, 39
BstX2I RGATCY 1 cut(s) 1903
BstXI CCANNNNNNTGG 2 cut(s) 2242, 2331
BstYI RGATCY 1 cut(s) 1903
BstZ17I GTATAC 1 cut(s) 2119
Bsu36I CCTNAGG 2 cut(s) 600, 1128
BsuI GTATCC 1 cut(s) 1947
BsuRI GGCC 5 cut(s) 623, 741, 889, 1494, 2225
BtsCI GGATG 6 cut(s) 952, 1289, 1312, 1401, 1584, 2264
BtsIMutI CAGTG 5 cut(s) 642, 925, 1540, 1819, 1977
Cac8I GCNNGC 1 cut(s) 743
CfoI GCGC 3 cut(s) 90, 926, 1251
Cfr13I GGNCC 4 cut(s) 112, 241, 1484, 2367
CseI GACGC 2 cut(s) 128, 2420
Csp6I GTAC 6 cut(s) 505, 608, 1657, 1692, 2032, 2229
CviAII CATG 6 cut(s) 247, 811, 1076, 1171, 2125, 2176
CviQI GTAC 6 cut(s) 505, 608, 1657, 1692, 2032, 2229
DpnI GATC 6 cut(s) 1514, 1532, 1679, 1905, 2090, 2129
DpnII GATC 6 cut(s) 1512, 1530, 1677, 1903, 2088, 2127
DriI GACNNNNNGTC 2 cut(s) 721, 2063
EaeI YGGCCR 2 cut(s) 739, 2223
Eam1104I CTCTTC 1 cut(s) 1949
Eam1105I GACNNNNNGTC 2 cut(s) 721, 2063
EarI CTCTTC 1 cut(s) 1949
Eco130I CCWWGG 1 cut(s) 624
Eco147I AGGCCT 2 cut(s) 623, 889
Eco24I GRGCYC 1 cut(s) 1236
Eco47I GGWCC 4 cut(s) 112, 241, 1484, 2367
Eco57I CTGAAG 2 cut(s) 557, 884
Eco81I CCTNAGG 2 cut(s) 600, 1128
Eco88I CYCGRG 1 cut(s) 477
EcoRI GAATTC 2 cut(s) 472, 2319
EcoRII CCWGG 4 cut(s) 889, 951, 1219, 1331
EcoT14I CCWWGG 1 cut(s) 624
EcoT22I ATGCAT 2 cut(s) 1763, 2053
EcoT38I GRGCYC 1 cut(s) 1236
ErhI CCWWGG 1 cut(s) 624
FaeI CATG 6 cut(s) 250, 814, 1079, 1174, 2128, 2179
FalI AAGNNNNNCTT 2 cut(s) 865, 897
FaqI GGGAC 1 cut(s) 254
FatI CATG 6 cut(s) 246, 810, 1075, 1170, 2124, 2175
FauI CCCGC 2 cut(s) 115, 1812
FauNDI CATATG 1 cut(s) 2047
FbaI TGATCA 1 cut(s) 1677
FblI GTMKAC 1 cut(s) 2118
FokI GGATG 6 cut(s) 959, 1276, 1319, 1388, 1591, 2251
FriOI GRGCYC 1 cut(s) 1236
FspBI CTAG 2 cut(s) 386, 713
FspI TGCGCA 1 cut(s) 89
GlaI GCGC 3 cut(s) 89, 925, 1250
GsuI CTGGAG 5 cut(s) 203, 672, 912, 1242, 1816
HaeII RGCGCY 1 cut(s) 927
HaeIII GGCC 5 cut(s) 623, 741, 889, 1494, 2225
HapII CCGG 2 cut(s) 1117, 1380
HgaI GACGC 2 cut(s) 128, 2420
HhaI GCGC 3 cut(s) 90, 926, 1251
Hin1II CATG 6 cut(s) 250, 814, 1079, 1174, 2128, 2179
Hin6I GCGC 3 cut(s) 88, 924, 1249
HinP1I GCGC 3 cut(s) 88, 924, 1249
HincII GTYRAC 2 cut(s) 675, 808
HindII GTYRAC 2 cut(s) 675, 808
HindIII AAGCTT 1 cut(s) 315
HinfI GANTC 6 cut(s) 847, 894, 1091, 1136, 1607, 2420
HpaII CCGG 2 cut(s) 1117, 1380
HphI GGTGA 3 cut(s) 4, 205, 1621
Hpy166II GTNNAC 4 cut(s) 675, 808, 974, 2119
Hpy188I TCNGA 5 cut(s) 51, 797, 864, 1651, 2132
Hpy188III TCNNGA 8 cut(s) 26, 469, 477, 581, 590, 1041, 1325, 2295
Hpy8I GTNNAC 4 cut(s) 675, 808, 974, 2119
HpyAV CCTTC 6 cut(s) 383, 859, 954, 977, 1756, 2278
HpyCH4III ACNGT 6 cut(s) 1084, 1360, 1390, 1734, 1814, 2146
HpyCH4IV ACGT 2 cut(s) 499, 2286
HpyF10VI GCNNNNNNNGC 6 cut(s) 128, 187, 292, 1120, 1337, 1767
HpySE526I ACGT 2 cut(s) 499, 2286
Hsp92II CATG 6 cut(s) 250, 814, 1079, 1174, 2128, 2179
HspAI GCGC 3 cut(s) 88, 924, 1249
Ksp22I TGATCA 1 cut(s) 1677
Kzo9I GATC 6 cut(s) 1512, 1530, 1677, 1903, 2088, 2127
LmnI GCTCC 2 cut(s) 1119, 1886
LweI GCATC 5 cut(s) 646, 1192, 1318, 1420, 1434
MaeI CTAG 2 cut(s) 386, 713
MaeII ACGT 2 cut(s) 499, 2286
MaeIII GTNAC 3 cut(s) 1078, 1559, 1588
MalI GATC 6 cut(s) 1514, 1532, 1679, 1905, 2090, 2129
MboI GATC 6 cut(s) 1512, 1530, 1677, 1903, 2088, 2127
MfeI CAATTG 1 cut(s) 1344
MflI RGATCY 1 cut(s) 1903
MhlI GDGCHC 2 cut(s) 1236, 2357
MlsI TGGCCA 2 cut(s) 741, 2225
MluNI TGGCCA 2 cut(s) 741, 2225
MlyI GAGTC 1 cut(s) 903
MmeI TCCRAC 3 cut(s) 238, 296, 1192
Mox20I TGGCCA 2 cut(s) 741, 2225
Mph1103I ATGCAT 2 cut(s) 1763, 2053
MscI TGGCCA 2 cut(s) 741, 2225
MseI TTAA 3 cut(s) 299, 363, 2406
MslI CAYNNNNRTG 2 cut(s) 300, 1838
Msp20I TGGCCA 2 cut(s) 741, 2225
MspA1I CMGCKG 2 cut(s) 380, 2024
MspI CCGG 2 cut(s) 1117, 1380
MspR9I CCNGG 5 cut(s) 891, 953, 1221, 1333, 1381
MunI CAATTG 1 cut(s) 1344
MvaI CCWGG 4 cut(s) 891, 953, 1221, 1333
MvnI CGCG 1 cut(s) 122
MwoI GCNNNNNNNGC 6 cut(s) 128, 187, 292, 1120, 1337, 1767
NciI CCSGG 1 cut(s) 1381
NdeI CATATG 1 cut(s) 2047
NdeII GATC 6 cut(s) 1512, 1530, 1677, 1903, 2088, 2127
NlaIII CATG 6 cut(s) 250, 814, 1079, 1174, 2128, 2179
NlaIV GGNNCC 3 cut(s) 242, 1115, 1882
NsbI TGCGCA 1 cut(s) 89
NsiI ATGCAT 2 cut(s) 1763, 2053
NspI RCATGY 2 cut(s) 814, 1079
PaeR7I CTCGAG 1 cut(s) 477
PceI AGGCCT 2 cut(s) 623, 889
PciI ACATGT 1 cut(s) 1075
PfeI GAWTC 5 cut(s) 847, 1091, 1136, 1607, 2420
PflMI CCANNNNNTGG 1 cut(s) 1319
PleI GAGTC 1 cut(s) 902
PpsI GAGTC 1 cut(s) 902
PscI ACATGT 1 cut(s) 1075
Psp6I CCWGG 4 cut(s) 889, 951, 1219, 1331
PspGI CCWGG 4 cut(s) 889, 951, 1219, 1331
PspN4I GGNNCC 3 cut(s) 242, 1115, 1882
PspPI GGNCC 4 cut(s) 112, 241, 1484, 2367
PstI CTGCAG 2 cut(s) 1342, 1600
PsuI RGATCY 1 cut(s) 1903
PvuII CAGCTG 2 cut(s) 380, 2024
RsaI GTAC 6 cut(s) 506, 609, 1658, 1693, 2033, 2230
RsaNI GTAC 6 cut(s) 505, 608, 1657, 1692, 2032, 2229
RseI CAYNNNNRTG 2 cut(s) 300, 1838
SaqAI TTAA 3 cut(s) 299, 363, 2406
Sau3AI GATC 6 cut(s) 1512, 1530, 1677, 1903, 2088, 2127
Sau96I GGNCC 4 cut(s) 112, 241, 1484, 2367
ScaI AGTACT 3 cut(s) 609, 1693, 2230
SchI GAGTC 1 cut(s) 903
ScrFI CCNGG 5 cut(s) 891, 953, 1221, 1333, 1381
SduI GDGCHC 2 cut(s) 1236, 2357
SfaNI GCATC 5 cut(s) 646, 1192, 1318, 1420, 1434
SfcI CTRYAG 4 cut(s) 1338, 1389, 1596, 1848
Sfr274I CTCGAG 1 cut(s) 477
SinI GGWCC 4 cut(s) 112, 241, 1484, 2367
SlaI CTCGAG 1 cut(s) 477
SmiMI CAYNNNNRTG 2 cut(s) 300, 1838
SmlI CTYRAG 3 cut(s) 425, 477, 831
SmoI CTYRAG 3 cut(s) 425, 477, 831
SseBI AGGCCT 2 cut(s) 623, 889
SsiI CCGC 4 cut(s) 122, 244, 286, 1805
SspI AATATT 1 cut(s) 1299
SspMI CTAG 2 cut(s) 386, 713
StuI AGGCCT 2 cut(s) 623, 889
StyD4I CCNGG 5 cut(s) 889, 951, 1219, 1331, 1379
StyI CCWWGG 1 cut(s) 624
TaaI ACNGT 6 cut(s) 1084, 1360, 1390, 1734, 1814, 2146
TaiI ACGT 2 cut(s) 502, 2289
TaqI TCGA 3 cut(s) 306, 478, 1515
TatI WGTACW 5 cut(s) 607, 1656, 1691, 2031, 2228
TfiI GAWTC 5 cut(s) 847, 1091, 1136, 1607, 2420
Tru1I TTAA 3 cut(s) 299, 363, 2406
Tru9I TTAA 3 cut(s) 299, 363, 2406
TscAI CASTG 5 cut(s) 649, 925, 1540, 1819, 1977
TspGWI ACGGA 3 cut(s) 125, 1073, 2391
TspRI CASTG 5 cut(s) 649, 925, 1540, 1819, 1977
Van91I CCANNNNNTGG 1 cut(s) 1319
VpaK11BI GGWCC 4 cut(s) 112, 241, 1484, 2367
XapI RAATTY 8 cut(s) 151, 175, 266, 472, 1705, 1715, 2319, 2438
XceI RCATGY 2 cut(s) 814, 1079
XcmI CCANNNNNNNNNTGG 4 cut(s) 498, 622, 1300, 2104
XhoI CTCGAG 1 cut(s) 477
XmiI GTMKAC 1 cut(s) 2118
XspI CTAG 2 cut(s) 386, 713
ZrmI AGTACT 3 cut(s) 609, 1693, 2230
Zsp2I ATGCAT 2 cut(s) 1763, 2053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.