Rw6G034570
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
59163273 .. 59170086
6814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G034570.1

Sequence Viewer

Length: 4323 bp
ATGGAGAGTAGCAGTGGAGATGTCTATAGAGTGAGCAGTGCACGTCTGAGCAGTTCAAACATTTGGAGGAACAGTACCATGGATGTTTTCTCCAAGTCTTCACACGATGAAGACGATGAAGAAGCGCTGAAATGGGCGGCCATTGAAAAACTGCCAACTTACTTGCGTATAAGGAGAGGCATTCTCACCGAGGAAGAAGGCGAAGCGAGAGAGATTGACATCAAGAATCTTGGATTGTTGGAAAGGAAGAATGTGTTGGAGAGGCTGGTGAAAGTTGCAGATGAAGATAATGAGAGGTTCTTGATGAAGCTCAAGGACCGGATTGATAGGGTTGGACTTGATATTCCGACGATTGAAGTCCGGTTTGAGCATTTGAATGTTGAAGCAGAAGCTTATGTAGGAGGGAGGGCGCTGCCCACACTCTATAACTTTTCTGTTAATATCTTGGAGGGATTCCTGAGTTTCTGTCGCATTATTCCAACTAGAAAGCATCCATTACCAATCCTTGATGATGTTAGTGGAATTATCAAACCAAAAAGAATGACACTGCTTTTAGGCCCCCCAAACTCTGGAAAAACCACATTGCTTTTGGCTTTGGCTGGTAAACTTGCTAAAGATCTAAAGTCTTCTGGGAGAGTTGCATATAACGGACATGGGATGGAAGAGTTTGTACCGGAGAGGACATCAGCTTATATTAGTCAGTATGATCTCCACATAGGGGAAATGACAGTAAGAGAAACACTGGCCTTTTCAGCAAGGTGTCAAGGGGTTGGAGGACGTTATGAAATGTTGGCAGAGTTATCAAGGAGAGAAAAGGCAGCAAATATTATGCCAGAGAAAGATCTTGATATCTACATGAAGGCTGCATCATTAGAAGGGCAGGAGGCCAATGTAGTTACAGATTACATACTCAAGATTCTGGGACTTGAAGTTTGTGCTGACACCATGGTGGGGGATGAAATGTTCCGAGGTATATCTGGCGGACAAAAGAAGCGAGTCACAACAGGGGAAATGCTGATATCAACTGGTTTAGACAGTTCAACAACATTTCAGATAGTGAATTCCCTCCGACAAACTATCCACATCCTCAATGGAACTGCTCTTATATCTCTTCTCCAGCCAGCACCGGAAACATATGATCTGTTTGATGACATAATTCTTCTGTCAGATGGGCAAATTGTATACCAAGGTCCCCGCGAAAATGTGCTCGAGTTCTTTGAGTATATGGGCTTCAAATGTCCAGAGAGGAAAGGAGTTGCTGATTTCCTTCAAGAAGTGACTTCAAAGAAGGATCAGGAGCAGTACTGGATACAGAAAGAAGAGCCTTATAATTTTATATCTTCCAAGGAATTTGCTGAAGCATTTCAGTCATTTCATATTGGTCGAAAACTAGGTGATGATCTTGCTACTCCATTTGACAAGTCCAAAGGTCACCCTGCTGCTTTAACAACTAAGAAGTATGGTGTTAGCAAGAGGGAACTGCTCAAAGCCTGCATTGCTAGAGAATATTTGCTGATGAAGAGGAATTCGTTTGTGTACATTTTCAAAATGACCCAGCTCACTCTATTGGCCTTTATATCAATGACACTATTTTTCCGTACTAAGATGCACCGGGATACAGTTGAGGATGGTGGGATTTACATGGGTGCTATGTTCTTCACAGTCATCATAATTATGTTCAATGGGTTCTCCGAGCTTGCATTGACTATCATGAAACTTCCTGTATTTTTCAAGCAAAGAGACCTTCTGTTCTATCCAGCTTGGGCATATTCCTTACCAGCATGGATCCTTAAGATTCCCATCACCTTTGTAGAAGTTGCCATTTGGGTGTTCATGACATACTATGTAATTGGTTTTGATCCAAACCCTGGAAGGTTTTTCAAGCAATATCTTTTGCTCCTATGCATTAACCAGATGGCATCCGGATTATTCCGATTTATGGGGGCATTAGGGAGGAATATAATTGTTGCCAACACATTTGGTTCATTTGCTCTACTTGCAGTTCTGGTTATGGGTGGCTTTATCTTGTCCCGAGAGAATGTGCAGGTGTGGTGGTTATGGGGTTATTGGATCTCACCAATGATGTATGGCCAGAATGCTATAGCTGTCAATGAATTTCTTGGAGACAGTTGGAGTCATATTCCTCCTGACTCAACAGAGTCGTTAGGGATCATGGTCTTGAAGTCTCGTGGGGTTTTCATACAAGCATATTGGTACTGGATTGGAGTAGGAGCTACAATTGGATATATATTTCTGTTTAATTTCTTCTACACTGTGGCCTTGCATTATCTTGATCCGTTTGGGAAACCTCAGGCTGTACTCTCCAAAGAAGCTTTAGCTGATAAAAACGCCGCTAGAGCTGGAGGAAACATAGAGCTATCATCAGGAGGAAAGAACTCTTCAGATGCAAAGAATGATAGTCGAAGAAGTATCTCATCTAGAACACTGTCTGCTAGAGTGGGCAGCTTTAATGAAGCCAATGAAAACAGGAAGAGGGGAATGGTTCTTCCTTTTGAACCCCTTTGGATTACATTTAATGAAATCAAATATTCTGTGGACATGCCCGAGGAAATGAAAACTCAAGGAATAACTGAGGAGCGGTTACCACTTCTAAAGGGCGTGACTGGTGCTTTTAGGCCTGGAGTTTTAACAGCTCTAATGGGCATAAGTGGTGCTGGAAAGACTACTCTAATGGATGTCTTGGCAGGCAGAAAAACTGGTGGATATATTGAGGGGGACATAACCATTTCTGGGTATCCAAAAAAGCAAGAAACATTTGCTCGTATATCAGGATATTGTGAGCAAACCGATATACACTCTCCTCATGTTACAGTATATGAGTCTTTGGTTTATTCTGCATGGCTCCGGTTGCCCCCTGAGGTTGATTCCGCAACTAGAAAGATGTTTGTTGAGGAAGTCATGGAGCTTGTGGAACTGACGTCGATAAGGGAGTCTCTTGTGGGATTGCCAGGAGTAAATGGTCTCTCAACCGAGCAGCGTAAAAGGCTAACCATTGCTGTAGAACTTGTTGCTAACCCTTCCATAATATTTATGGATGAGCCAACTTCTGGTCTTGATGCAAGGGCAGCAGCTATTGTAATGAGAACAGTAAGGAATACTGTGGACACAGGGCGAACTGTAGTCTGCACTATCCACCAGCCAAGCATCGACATTTTTGATGCTTTTGATGAGCTGTTTCTATTGAAAAGGGGAGGTGAAGAGATATATGTTGGCCCTCTAGGCCGACATTCTTCCCAGTTGATCAAGTATTTTGAGGAAATTGATGGGGTTCCCAAAATCAAGGATGGTTACAATCCAGCAACTTGGATGTTGGAGGTTACTTCAGCAGCACAGGAAGTAGTTCTCGGTATTAACTTTACCGATATATACAGGAGCTCAGAGCTATATAGGAGAAACAAGGACCTGATCAAGGAACTGAGTACTCCTCCGCAAGGCACAAAAGACTTGTACTTCTCTACTAAATACTCTCAGTCTTTCTACTATCAGTGTATGGCTTGTTTATGGAAACAGCATCTATCATACTGGCGAAACCCACCATACAGTGCAGTGAGACTCCTATTCACCACTTTCATAGCCTTAATGTTTGGAACAATATTCTGGGATCTTGGCTCCAAAAGGAAAAACCAACAAGATCTATTCAATGCTATGGGTTCCATGTACGCCGCTGTTCTCTTCATTGGAGTACAAAATGCCTCATCGGTGCAGCCAGTTGTGGCTATCGAGAGGACAGTCTTTTACAGAGAAAGGGCTGCTGGAATGTACTCAGCATTGCCATATGCCTTCGGACAGGTTGTGATTGAGCTTCCATACATCTTTGTCCAGACTGTCATATATGGAGTTATAGTATACGCCATGATTGGATTTGACTGGACAGTGAGCAAGTTCCTTTGGTATCTCTTCTTCATGTACTTCACTTTCTTATACTTTACATTCTATGGGATGATGACCGTGGCTGTAACACCCAACCACAACATTGCCGCCATAGTGTCCTCTGCCTTCTATGCAATATGGAACCTTTTCTCAGGATTCATTGTTCCCCGAACAAGAATGCCAATTTGGTGGAGATGGTACTATTGGATCTGCCCGGTCTCATATACATTGTATGGACTTGTTGCTTCACAGTTTGGAGACATAAAAGAAGTAATGGATTCAGGTGAAAGTGTGGAAGACTTTGTGAGGAACTACTTTGGTTACAGACACGACTTTGTAGGTATTGTTGCAGTTGTGCTTGTTGGGATTTCAGTGCTTTTCGGGTTCACCTTTGCCTTCTCGATCAAGGCATTCAACTTCCAAAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1440

Amino Acids

163.2

Weight (kDa)

6.71

Isoelectric Point (pI)

40.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 94 - 144 6.5e-07 ABC-transporter N-terminal
ABC_tran PF00005 169 - 339 1.5e-11 ABC transporter
ABC2_membrane PF01061 494 - 706 7.7e-48 ABC-2 type transporter
PDR_assoc PF08370 711 - 773 1.5e-27 Plant PDR ABC transporter associated
ABC_tran PF00005 871 - 1023 5.7e-20 ABC transporter
ABC2_membrane PF01061 1168 - 1382 2.3e-64 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1329
AarI CACCTGC 1 cut(s) 2035
AatII GACGTC 1 cut(s) 2942
Acc36I ACCTGC 1 cut(s) 2035
AccB7I CCANNNNNTGG 3 cut(s) 569, 1868, 3068
AccBSI CCGCTC 1 cut(s) 2599
AccI GTMKAC 2 cut(s) 1182, 3867
AccII CGCG 1 cut(s) 1197
AccIII TCCGGA 1 cut(s) 1922
AciI CCGC 9 cut(s) 137, 981, 1195, 2352, 2599, 2889, 3449, 3684, 3999
AclWI GGATC 9 cut(s) 1299, 1780, 1793, 1853, 2078, 2177, 2288, 3630, 4106
AcoI YGGCCR 2 cut(s) 138, 2089
AcsI RAATTY 4 cut(s) 1060, 1349, 1525, 2114
AcuI CTGAAG 3 cut(s) 1377, 2385, 3327
AcyI GRCGYC 1 cut(s) 2939
AfeI AGCGCT 1 cut(s) 126
AfiI CCNNNNNNNGG 9 cut(s) 569, 718, 951, 1868, 1939, 2751, 3068, 3430, 3452
AflII CTTAAG 1 cut(s) 1790
AjiI CACGTC 1 cut(s) 44
AjnI CCWGG 3 cut(s) 1867, 2638, 2968
AjuI GAANNNNNNNTTGG 4 cut(s) 239, 271, 4060, 4092
AleI CACNNNNGTG 1 cut(s) 947
AloI GAACNNNNNNTCC 4 cut(s) 947, 979, 4038, 4070
Alw21I GWGCWC 3 cut(s) 43, 1209, 3398
Alw26I GTCTC 8 cut(s) 1734, 2118, 2190, 2958, 2987, 3565, 4114, 4143
Alw44I GTGCAC 1 cut(s) 39
AlwI GGATC 9 cut(s) 1299, 1780, 1793, 1853, 2078, 2177, 2288, 3630, 4106
Ama87I CYCGRG 3 cut(s) 1208, 2031, 2564
Aor13HI TCCGGA 1 cut(s) 1922
Aor51HI AGCGCT 1 cut(s) 126
ApaLI GTGCAC 1 cut(s) 39
ApoI RAATTY 4 cut(s) 1060, 1349, 1525, 2114
ArsI GACNNNNNNTTYG 2 cut(s) 915, 947
Asp700I GAANNNNTTC 3 cut(s) 1362, 3360, 4037
AspLEI GCGC 2 cut(s) 127, 412
AspS9I GGNCC 5 cut(s) 316, 557, 1190, 3233, 3421
AsuC2I CCSGG 2 cut(s) 1613, 4106
AvaI CYCGRG 3 cut(s) 1208, 2031, 2564
AvaII GGWCC 3 cut(s) 316, 1190, 3421
AxyI CCTNAGG 2 cut(s) 2310, 2877
BaeGI GKGCMC 1 cut(s) 43
BalI TGGCCA 1 cut(s) 2091
BamHI GGATCC 1 cut(s) 1785
BanII GRGCYC 1 cut(s) 3398
BarI GAAGNNNNNNTAC 6 cut(s) 654, 686, 1214, 1246, 3905, 3937
BauI CACGAG 1 cut(s) 2187
BbsI GAAGAC 4 cut(s) 90, 117, 618, 4194
Bbv12I GWGCWC 3 cut(s) 43, 1209, 3398
BccI CCATC 8 cut(s) 652, 1163, 1622, 1808, 1909, 3278, 3299, 4080
BciT130I CCWGG 3 cut(s) 1869, 2640, 2970
BciVI GTATCC 3 cut(s) 1302, 1609, 2766
BclI TGATCA 2 cut(s) 3261, 3426
BcnI CCSGG 2 cut(s) 1613, 4106
BcoDI GTCTC 8 cut(s) 1734, 2118, 2190, 2958, 2987, 3565, 4114, 4143
BfaI CTAG 8 cut(s) 483, 1391, 1500, 2355, 2439, 2454, 2895, 3239
BfmI CTRYAG 4 cut(s) 25, 2100, 3018, 3138
BfoI RGCGCY 2 cut(s) 128, 413
BfrI CTTAAG 1 cut(s) 1790
BfuAI ACCTGC 1 cut(s) 2035
BfuI GTATCC 3 cut(s) 1302, 1609, 2766
BglI GCCNNNNNGGC 1 cut(s) 3240
BglII AGATCT 3 cut(s) 616, 841, 3652
BmcAI AGTACT 2 cut(s) 1304, 3442
Bme1390I CCNGG 5 cut(s) 1613, 1869, 2640, 2970, 4106
Bme18I GGWCC 3 cut(s) 316, 1190, 3421
BmeT110I CYCGRG 3 cut(s) 1208, 2031, 2564
BmgBI CACGTC 1 cut(s) 44
BmgT120I GGNCC 5 cut(s) 316, 557, 1190, 3233, 3421
BmiI GGNNCC 8 cut(s) 559, 1192, 1787, 2864, 3291, 3631, 3673, 4034
BmrFI CCNGG 5 cut(s) 1613, 1869, 2640, 2970, 4106
BmrI ACTGGG 1 cut(s) 3250
BmsI GCATC 9 cut(s) 499, 875, 1596, 1928, 2395, 3067, 3169, 3174, 3541
BmuI ACTGGG 1 cut(s) 3250
BpiI GAAGAC 4 cut(s) 90, 117, 618, 4194
BplI GAGNNNNNCTC 4 cut(s) 168, 200, 3430, 3462
BpmI CTGGAG 3 cut(s) 1100, 2382, 2661
BpuEI CTTGAG 3 cut(s) 296, 896, 2565
BpuMI CCSGG 2 cut(s) 1613, 4106
BsaBI GATNNNNATC 2 cut(s) 218, 1799
BsaHI GRCGYC 1 cut(s) 2939
BsaI GGTCTC 3 cut(s) 1734, 2987, 4114
BsaJI CCNNGG 9 cut(s) 78, 189, 945, 967, 1186, 1344, 1867, 2565, 3969
BsaWI WCCGGW 6 cut(s) 318, 360, 673, 1126, 1922, 2865
BsaXI ACNNNNNCTCC 4 cut(s) 58, 88, 3849, 3879
Bsc4I CCNNNNNNNGG 9 cut(s) 569, 718, 951, 1868, 1939, 2751, 3068, 3430, 3452
Bse21I CCTNAGG 2 cut(s) 2310, 2877
Bse3DI GCAATG 5 cut(s) 581, 1494, 3012, 3788, 3993
Bse8I GATNNNNATC 2 cut(s) 218, 1799
BseAI TCCGGA 1 cut(s) 1922
BseBI CCWGG 3 cut(s) 1869, 2640, 2970
BseDI CCNNGG 9 cut(s) 78, 189, 945, 967, 1186, 1344, 1867, 2565, 3969
BseJI GATNNNNATC 2 cut(s) 218, 1799
BseLI CCNNNNNNNGG 9 cut(s) 569, 718, 951, 1868, 1939, 2751, 3068, 3430, 3452
BseMI GCAATG 5 cut(s) 581, 1494, 3012, 3788, 3993
BseRI GAGGAG 3 cut(s) 2609, 2811, 3435
BseSI GKGCMC 1 cut(s) 43
BseYI CCCAGC 1 cut(s) 1554
BsgI GTGCAG 4 cut(s) 2063, 3130, 3585, 3743
Bsh1236I CGCG 1 cut(s) 1197
BsiHKAI GWGCWC 3 cut(s) 43, 1209, 3398
BsiHKCI CYCGRG 3 cut(s) 1208, 2031, 2564
BsiSI CCGG 8 cut(s) 319, 361, 674, 1127, 1612, 1923, 2866, 4106
BslFI GGGAC 4 cut(s) 936, 1176, 2014, 2750
BslI CCNNNNNNNGG 9 cut(s) 569, 718, 951, 1868, 1939, 2751, 3068, 3430, 3452
BsmAI GTCTC 8 cut(s) 1734, 2118, 2190, 2958, 2987, 3565, 4114, 4143
BsmFI GGGAC 4 cut(s) 936, 1176, 2014, 2750
BsmI GAATGC 4 cut(s) 180, 2101, 4074, 4301
Bso31I GGTCTC 3 cut(s) 1734, 2987, 4114
BsoBI CYCGRG 3 cut(s) 1208, 2031, 2564
Bsp1286I GDGCHC 3 cut(s) 43, 1209, 3398
Bsp13I TCCGGA 1 cut(s) 1922
Bsp1407I TGTACA 1 cut(s) 1536
Bsp19I CCATGG 2 cut(s) 78, 945
BspACI CCGC 9 cut(s) 137, 981, 1195, 2352, 2599, 2889, 3449, 3684, 3999
BspEI TCCGGA 1 cut(s) 1922
BspFNI CGCG 1 cut(s) 1197
BspHI TCATGA 2 cut(s) 1710, 1833
BspLI GGNNCC 8 cut(s) 559, 1192, 1787, 2864, 3291, 3631, 3673, 4034
BspMI ACCTGC 1 cut(s) 2035
BspPI GGATC 9 cut(s) 1299, 1780, 1793, 1853, 2078, 2177, 2288, 3630, 4106
BspQI GCTCTTC 1 cut(s) 1314
BspTI CTTAAG 1 cut(s) 1790
BspTNI GGTCTC 3 cut(s) 1734, 2987, 4114
BsrBI CCGCTC 1 cut(s) 2599
BsrDI GCAATG 5 cut(s) 581, 1494, 3012, 3788, 3993
BsrGI TGTACA 1 cut(s) 1536
BssECI CCNNGG 9 cut(s) 78, 189, 945, 967, 1186, 1344, 1867, 2565, 3969
BssNAI GTATAC 2 cut(s) 1183, 3868
BssNI GRCGYC 1 cut(s) 2939
BssSI CACGAG 1 cut(s) 2187
BssT1I CCWWGG 4 cut(s) 78, 945, 1186, 1344
Bst1107I GTATAC 2 cut(s) 1183, 3868
Bst2BI CACGAG 1 cut(s) 2187
Bst2UI CCWGG 3 cut(s) 1869, 2640, 2970
Bst6I CTCTTC 9 cut(s) 657, 1116, 1314, 1514, 2404, 2486, 3213, 3698, 3923
BstACI GRCGYC 1 cut(s) 2939
BstAFI CTTAAG 1 cut(s) 1790
BstAUI TGTACA 1 cut(s) 1536
BstC8I GCNNGC 4 cut(s) 1122, 1492, 1698, 2707
BstDSI CCRYGG 3 cut(s) 78, 945, 3969
BstEII GGTNACC 2 cut(s) 1430, 2601
BstENI CCTNNNNNAGG 2 cut(s) 3428, 3450
BstFNI CGCG 1 cut(s) 1197
BstH2I RGCGCY 2 cut(s) 128, 413
BstHHI GCGC 2 cut(s) 127, 412
BstMAI GTCTC 8 cut(s) 1734, 2118, 2190, 2958, 2987, 3565, 4114, 4143
BstMWI GCNNNNNNNGC 9 cut(s) 752, 1496, 1997, 2357, 2869, 3004, 3086, 3240, 4022
BstNI CCWGG 3 cut(s) 1869, 2640, 2970
BstNSI RCATGY 1 cut(s) 2563
BstPI GGTNACC 2 cut(s) 1430, 2601
BstSCI CCNGG 5 cut(s) 1611, 1867, 2638, 2968, 4104
BstSFI CTRYAG 4 cut(s) 25, 2100, 3018, 3138
BstSLI GKGCMC 1 cut(s) 43
BstUI CGCG 1 cut(s) 1197
BstV2I GAAGAC 4 cut(s) 90, 117, 618, 4194
BstX2I RGATCY 7 cut(s) 616, 841, 1785, 2070, 3622, 3652, 4098
BstXI CCANNNNNNTGG 2 cut(s) 3324, 4080
BstYI RGATCY 7 cut(s) 616, 841, 1785, 2070, 3622, 3652, 4098
BstZ17I GTATAC 2 cut(s) 1183, 3868
Bsu36I CCTNAGG 2 cut(s) 2310, 2877
BsuI GTATCC 3 cut(s) 1302, 1609, 2766
BtgI CCRYGG 3 cut(s) 78, 945, 3969
BtrI CACGTC 1 cut(s) 44
BtsI GCAGTG 4 cut(s) 19, 43, 545, 3573
BveI ACCTGC 1 cut(s) 2035
Cac8I GCNNGC 4 cut(s) 1122, 1492, 1698, 2707
CciI TCATGA 2 cut(s) 1710, 1833
CfoI GCGC 2 cut(s) 127, 412
Cfr13I GGNCC 5 cut(s) 316, 557, 1190, 3233, 3421
EaeI YGGCCR 2 cut(s) 138, 2089
Eam1104I CTCTTC 9 cut(s) 657, 1116, 1314, 1514, 2404, 2486, 3213, 3698, 3923
EarI CTCTTC 9 cut(s) 657, 1116, 1314, 1514, 2404, 2486, 3213, 3698, 3923
EciI GGCGGA 1 cut(s) 996
Ecl136II GAGCTC 1 cut(s) 3396
Eco130I CCWWGG 4 cut(s) 78, 945, 1186, 1344
Eco147I AGGCCT 1 cut(s) 2638
Eco24I GRGCYC 1 cut(s) 3398
Eco31I GGTCTC 3 cut(s) 1734, 2987, 4114
Eco32I GATATC 2 cut(s) 850, 1020
Eco47I GGWCC 3 cut(s) 316, 1190, 3421
Eco47III AGCGCT 1 cut(s) 126
Eco53kI GAGCTC 1 cut(s) 3396
Eco57I CTGAAG 3 cut(s) 1377, 2385, 3327
Eco81I CCTNAGG 2 cut(s) 2310, 2877
Eco88I CYCGRG 3 cut(s) 1208, 2031, 2564
Eco91I GGTNACC 2 cut(s) 1430, 2601
EcoICRI GAGCTC 1 cut(s) 3396
EcoNI CCTNNNNNAGG 2 cut(s) 3428, 3450
EcoO109I RGGNCCY 3 cut(s) 557, 1190, 3421
EcoO65I GGTNACC 2 cut(s) 1430, 2601
EcoRI GAATTC 2 cut(s) 1060, 1525
EcoRII CCWGG 3 cut(s) 1867, 2638, 2968
EcoRV GATATC 2 cut(s) 850, 1020
EcoT14I CCWWGG 4 cut(s) 78, 945, 1186, 1344
EcoT22I ATGCAT 1 cut(s) 1907
EcoT38I GRGCYC 1 cut(s) 3398
ErhI CCWWGG 4 cut(s) 78, 945, 1186, 1344
FaqI GGGAC 4 cut(s) 936, 1176, 2014, 2750
FauI CCCGC 1 cut(s) 1202
FauNDI CATATG 2 cut(s) 1135, 3796
FbaI TGATCA 2 cut(s) 3261, 3426
FblI GTMKAC 2 cut(s) 1182, 3867
FriOI GRGCYC 1 cut(s) 3398
FspBI CTAG 8 cut(s) 483, 1391, 1500, 2355, 2439, 2454, 2895, 3239
GlaI GCGC 2 cut(s) 126, 411
GsaI CCCAGC 1 cut(s) 1558
GsuI CTGGAG 3 cut(s) 1100, 2382, 2661
HaeII RGCGCY 2 cut(s) 128, 413
HapII CCGG 8 cut(s) 319, 361, 674, 1127, 1612, 1923, 2866, 4106
HhaI GCGC 2 cut(s) 127, 412
Hin1I GRCGYC 1 cut(s) 2939
Hin6I GCGC 2 cut(s) 125, 410
HinP1I GCGC 2 cut(s) 125, 410
HindIII AAGCTT 2 cut(s) 390, 2331
HpaII CCGG 8 cut(s) 319, 361, 674, 1127, 1612, 1923, 2866, 4106
Hpy166II GTNNAC 8 cut(s) 41, 605, 1183, 1537, 2557, 3124, 3868, 4278
Hpy8I GTNNAC 8 cut(s) 41, 605, 1183, 1537, 2557, 3124, 3868, 4278
Hpy99I CGWCG 2 cut(s) 352, 2944
HpyCH4IV ACGT 3 cut(s) 43, 778, 2939
HpyF10VI GCNNNNNNNGC 9 cut(s) 752, 1496, 1997, 2357, 2869, 3004, 3086, 3240, 4022
HpySE526I ACGT 3 cut(s) 43, 778, 2939
Hsp92I GRCGYC 1 cut(s) 2939
HspAI GCGC 2 cut(s) 125, 410
Kpn2I TCCGGA 1 cut(s) 1922
Ksp22I TGATCA 2 cut(s) 3261, 3426
LguI GCTCTTC 1 cut(s) 1314
LmnI GCTCC 8 cut(s) 1297, 1902, 2231, 2596, 2868, 2923, 3393, 3635
LweI GCATC 9 cut(s) 499, 875, 1596, 1928, 2395, 3067, 3169, 3174, 3541
MaeI CTAG 8 cut(s) 483, 1391, 1500, 2355, 2439, 2454, 2895, 3239
MaeII ACGT 3 cut(s) 43, 778, 2939
MbiI CCGCTC 1 cut(s) 2599
MfeI CAATTG 1 cut(s) 2238
MflI RGATCY 7 cut(s) 616, 841, 1785, 2070, 3622, 3652, 4098
MhlI GDGCHC 3 cut(s) 43, 1209, 3398
MlsI TGGCCA 1 cut(s) 2091
MluNI TGGCCA 1 cut(s) 2091
MlyI GAGTC 7 cut(s) 1005, 2143, 2144, 2168, 2849, 2960, 3567
MmeI TCCRAC 9 cut(s) 219, 237, 313, 371, 503, 751, 1093, 2111, 3312
Mox20I TGGCCA 1 cut(s) 2091
Mph1103I ATGCAT 1 cut(s) 1907
MroI TCCGGA 1 cut(s) 1922
MroXI GAANNNNTTC 3 cut(s) 1362, 3360, 4037
MscI TGGCCA 1 cut(s) 2091
MslI CAYNNNNRTG 4 cut(s) 375, 947, 1673, 1826
Msp20I TGGCCA 1 cut(s) 2091
MspA1I CMGCKG 1 cut(s) 3686
MspCI CTTAAG 1 cut(s) 1790
MspI CCGG 8 cut(s) 319, 361, 674, 1127, 1612, 1923, 2866, 4106
MspR9I CCNGG 5 cut(s) 1613, 1869, 2640, 2970, 4106
MunI CAATTG 1 cut(s) 2238
Mva1269I GAATGC 4 cut(s) 180, 2101, 4074, 4301
MvaI CCWGG 3 cut(s) 1869, 2640, 2970
MvnI CGCG 1 cut(s) 1197
MwoI GCNNNNNNNGC 9 cut(s) 752, 1496, 1997, 2357, 2869, 3004, 3086, 3240, 4022
NciI CCSGG 2 cut(s) 1613, 4106
NcoI CCATGG 2 cut(s) 78, 945
NdeI CATATG 2 cut(s) 1135, 3796
NlaIV GGNNCC 8 cut(s) 559, 1192, 1787, 2864, 3291, 3631, 3673, 4034
NmuCI GTSAC 4 cut(s) 997, 1276, 1430, 2620
NsiI ATGCAT 1 cut(s) 1907
NspI RCATGY 1 cut(s) 2563
OliI CACNNNNGTG 1 cut(s) 947
PaeR7I CTCGAG 1 cut(s) 1208
PagI TCATGA 2 cut(s) 1710, 1833
PaqCI CACCTGC 1 cut(s) 2035
PceI AGGCCT 1 cut(s) 2638
PciSI GCTCTTC 1 cut(s) 1314
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PctI GAATGC 4 cut(s) 180, 2101, 4074, 4301
PdmI GAANNNNTTC 3 cut(s) 1362, 3360, 4037
PfeI GAWTC 7 cut(s) 226, 453, 916, 1795, 2885, 4047, 4169
PflMI CCANNNNNTGG 3 cut(s) 569, 1868, 3068
PleI GAGTC 7 cut(s) 1004, 2142, 2144, 2167, 2848, 2959, 3567
PpsI GAGTC 7 cut(s) 1004, 2142, 2144, 2167, 2848, 2959, 3567
PpuMI RGGWCCY 2 cut(s) 1190, 3421
PsiI TTATAA 1 cut(s) 1329
Psp124BI GAGCTC 1 cut(s) 3398
Psp5II RGGWCCY 2 cut(s) 1190, 3421
Psp6I CCWGG 3 cut(s) 1867, 2638, 2968
PspEI GGTNACC 2 cut(s) 1430, 2601
PspFI CCCAGC 1 cut(s) 1554
PspGI CCWGG 3 cut(s) 1867, 2638, 2968
PspN4I GGNNCC 8 cut(s) 559, 1192, 1787, 2864, 3291, 3631, 3673, 4034
PspPI GGNCC 5 cut(s) 316, 557, 1190, 3233, 3421
PspPPI RGGWCCY 2 cut(s) 1190, 3421
PspXI VCTCGAGB 1 cut(s) 1208
PsuI RGATCY 7 cut(s) 616, 841, 1785, 2070, 3622, 3652, 4098
RseI CAYNNNNRTG 4 cut(s) 375, 947, 1673, 1826
SacI GAGCTC 1 cut(s) 3398
SapI GCTCTTC 1 cut(s) 1314
Sau96I GGNCC 5 cut(s) 316, 557, 1190, 3233, 3421
ScaI AGTACT 2 cut(s) 1304, 3442
SchI GAGTC 7 cut(s) 1005, 2143, 2144, 2168, 2849, 2960, 3567
ScrFI CCNGG 5 cut(s) 1613, 1869, 2640, 2970, 4106
SduI GDGCHC 3 cut(s) 43, 1209, 3398
SfaNI GCATC 9 cut(s) 499, 875, 1596, 1928, 2395, 3067, 3169, 3174, 3541
SfcI CTRYAG 4 cut(s) 25, 2100, 3018, 3138
SfiI GGCCNNNNNGGCC 1 cut(s) 3240
Sfr274I CTCGAG 1 cut(s) 1208
SinI GGWCC 3 cut(s) 316, 1190, 3421
SlaI CTCGAG 1 cut(s) 1208
SmiMI CAYNNNNRTG 4 cut(s) 375, 947, 1673, 1826
SmlI CTYRAG 5 cut(s) 311, 911, 1208, 1790, 2580
SmoI CTYRAG 5 cut(s) 311, 911, 1208, 1790, 2580
SseBI AGGCCT 1 cut(s) 2638
SsiI CCGC 9 cut(s) 137, 981, 1195, 2352, 2599, 2889, 3449, 3684, 3999
SspI AATATT 5 cut(s) 826, 1508, 2549, 3048, 3615
SspMI CTAG 8 cut(s) 483, 1391, 1500, 2355, 2439, 2454, 2895, 3239
SstI GAGCTC 1 cut(s) 3398
StuI AGGCCT 1 cut(s) 2638
StyD4I CCNGG 5 cut(s) 1611, 1867, 2638, 2968, 4104
StyI CCWWGG 4 cut(s) 78, 945, 1186, 1344
TaiI ACGT 3 cut(s) 46, 781, 2942
TaqI TCGA 7 cut(s) 1209, 1384, 2422, 2942, 3168, 3741, 4292
TatI WGTACW 8 cut(s) 1302, 1536, 2317, 3440, 3468, 3703, 3780, 3927
TauI GCSGC 4 cut(s) 140, 2354, 3686, 4001
TfiI GAWTC 7 cut(s) 226, 453, 916, 1795, 2885, 4047, 4169
TseFI GTSAC 4 cut(s) 997, 1276, 1430, 2620
Tsp45I GTSAC 4 cut(s) 997, 1276, 1430, 2620
TspGWI ACGGA 3 cut(s) 663, 1586, 2286
Van91I CCANNNNNTGG 3 cut(s) 569, 1868, 3068
Vha464I CTTAAG 1 cut(s) 1790
VneI GTGCAC 1 cut(s) 39
VpaK11BI GGWCC 3 cut(s) 316, 1190, 3421
XagI CCTNNNNNAGG 2 cut(s) 3428, 3450
XapI RAATTY 4 cut(s) 1060, 1349, 1525, 2114
XbaI TCTAGA 1 cut(s) 2438
XceI RCATGY 1 cut(s) 2563
XcmI CCANNNNNNNNNTGG 3 cut(s) 586, 1088, 3049
XhoI CTCGAG 1 cut(s) 1208
XmiI GTMKAC 2 cut(s) 1182, 3867
XmnI GAANNNNTTC 3 cut(s) 1362, 3360, 4037
XspI CTAG 8 cut(s) 483, 1391, 1500, 2355, 2439, 2454, 2895, 3239
ZraI GACGTC 1 cut(s) 2940
ZrmI AGTACT 2 cut(s) 1304, 3442
Zsp2I ATGCAT 1 cut(s) 1907
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.