FvH4_5g00550
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000493
Physical Location & Seq
Forward (+)
341031 .. 348245
7215 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g00550.t2

Sequence Viewer

Length: 4242 bp
ATGAACTTCATGATCAGCCAAGAACAAGAAGGAAAGCCAATCTCCGAGCCTCCTTCCGGCGACGGAGCCACCGCCGCTAAGGAGTCGAGTCCGACAATGACGACATGGGGTGCCATTGAGAGACTGCCTACGTATTCACGCACAAGGAGAGGCATTCTACACGGTCAATGTCAGGAGGAGGAGGACGTTCAATGCAGAGAGATTGATGTAAAGAAGAATCTTGGACTACCAGAGAGGAAGACTTTGTTGGAGAGGCTAGTGAATATTGTTGAGCATGATAATGCCAAGTTCTTGCTCAAGATCAAGGATCGCATGAATAGAGTTGGACTTGAATTTCCAACAACTGAAGTGCGGTTTGAGCATTTAAATGTTGAAGCAGAAGCTTATGTAGGAAGCAGGGCATCATCTACAATGTTCAACTTCTCGATTAATATGTTGGAGGGATTCCTGAATTATTTTCACATTCTTCAAAGTAAAAAAAGACCTTTTCCAATCCTTCATGATGTAAGTGGGATTATCAAACCAAGAAGAATGACACTCCTTTTAGGCCCCCCTGGCTCTGGAAAGACGACTTTACTATTGGCATTGGCTGGAAAACTCGGTAAAGCCAATCTGAAATTATCGGGGAGAGTTACATACAATGGAGTGGAGACGGATGAGTTTGTGTCAGAGAGGACATCAGCTTATGTCAGTCAACATGATCTCCACATACCAGAATTGACAGTGAGAGAAACACTGGCTTTTGCAGCTAGATGTCAAGGTGTTGGATCACGTTATGAAATGTTGGTGGAAGTATTAAGGAGAGAAAAGGCTGCAAATATAATGCCAGATCTTGATCTTGATCTCTACATGAAGGCAGCAGCACTAGAGGGACAGGAAACTAATATAGTTACAGACTTTATTCTCAAGGTTTTGGGACTCGAAGAATGTGCTGACATTATGGTAGGAGATGAAATGACCAGAGGTATCTCTGGTGGAGAAAAGAAGCGACTCACCACAGGGGAGATGCTGGTTGGACCGGAAAGAGTACTTCTTATGGATGAGATATCAAACGGGCTGGACAGTTCAACAACATTCCAAATAGTGAAATCACTACAACAATACGTCCATATCCTTAACGGAACTGCATTTATCGCTCTACTGCAGCCAGCACCAGAGACTTATGATCTCTTCGATGATATAATTCTCCTCTCGGATGGCTACATTGTGTATCAAGGTCCCCGTGAAAATGTTCTTGAATTCTTTGAGTATATGGGCTTCAAATGTCCAGAGAGGAAAGGAGTTGCTGATTTCCTACAAGAGGTGACATCAAGAAAAGATCAAGAGCAATACTGGGCTCATGTGGATAGGCCTTATACCTTTGTAACAACTAAAGAATTTTCTGAAGCAATGCAGTTATTTCATATTGGTAGGAAACTTGATGATGAGCTTTCTATTCCATTTAACAAGTCTGAAGGCCACCCTGCTGCTTTGTCAACCAAGAAATATGGTGTTAGTAAGAAGGAATTGTTCAAAGCTTGTATGGCCAGACAAATTTTGCTTACGAAGAGGAATTCATTCGTCTACATTTTCAAATTGGTCCAGCTTATTATAGTTGCTGTTACAACAATGTCATTATTTTTCCATACTGTGATGGACCGGAACACAGTAGCAGATGGTGAGATTTATATGGGAGCTTTATTCTATACGCTACTTGCAATTATGCTCAATGGGTTTGCAGAGCTTCATATGACAGTCACCAGACTGCCTGTGTTTTACAAACAAAGGGACCATCTGTTCTATCCTGCTTGGGCATACTCTTTACCCACATGGATGATAAGGATCCCTATAACTTTTGTGGACGTTTTCATCTGGATGATCATTACTTACTACAGTGTAGGTTATGATCCGAGCATTGAAAGGTTTTTCAAACAGTTCATTCTACTGCTGTGTGTTAGCCAGATGGCAAATGGACTGTTTCGATTGATAGGGGCACTAGGAAGGAACATAACTATTTCAAACACATTTGGATTTGGTGCTTTACTTCTCGTTCTTGGTCTGGGTGGCTTTATCCTATCAAAAGATGATATGAAGAAATGGTGGTTGTGGGGATATTGGCTCTCACCATTCACGTATGGACTGAATGCAATCGCTGTCAATGAATTTCTTGGAAAAAGTTGGAAAGATGTTCCTGCTAACTCACCAGAAGCATTAGGAGTTATGGTCTTGAAGTATCAAGGCATAGTCCCAGAGGCACGCTTTTACTGGATTGGAGTAGTAGCTTTGATTGGATTTATTCTTCTGTTGAATTTCATTTTCACCTTGGCACTTCAGTATCTTGATCCAATTGAGAAGCCCCAAGCAATACTATCCAATGAGGCATCCTCTACAACAGATAATATCAGAGTTTCAAGCAATCCTACTATGCAGCATGGCATGGTTCTTCCATTTCAACCCCTTTCACTTACTTTCGAGGAAATCAGATATGCTGTTGATATGCCTAAGGAAATGAAAGATCAAAGCAAAACTGAAGATCGGCTAGAACTTCTGAAGAGTGTGAGTGGTGCTTTTAGGCCTGGAGTTCTAACAGCTTTGATGGGTGTTAGTGGCGCTGGAAAAACCACTCTCATGGATGTCTTGGCAGGAAGGAAGACAAGTGGATATATAGAGGGGAGCATCACCTTATCTGGATATGCAAAAAAGCAAGAGACATTTGCTCGCATAGCAGGATACTGTGAGCAAACAGATATACACTCCCCTCATGTCACTGTTTACGAGTCTTTGGTTTACTCTGCATGGCTTCGGTTGCCCCGGGAGGTTGATTCTCCAACCAGAAATATGTTTATTGAGGAAATCATGGAGCTTGTAGAAATGACCTCAATAAGTGACAGACTTGTTGGATTCCCAGGGGTGAATGGTCTCTCAACTGAACAACGCAAAAGGCTAACAATTGCAGTAGAGCTTGTTGCTAACCCCTCGATAATATTTATGGATGAGCCGACCTCTGGCCTTGATGCTAGGGCGGCAGCAATTGTAATGAGAACGGTGAGGAATACAGTGGACACAGGTAGAACTGTAGTCTGTACCATCCACCAACCAAGCATTGACATATTTGATGCTTTTGATGAGATGCTGCTTTTGAAACGGGGAGGTGAAGAAATATATGTTGGTCCTTTAGGTCATCATGCTTATCAGATGATCGAATACTTTCAGGGGATTAGTGGAGTTTCTAAAATAAAGTATGGTTATAATCCGGCAACTTGGATGTTGGAGGTTACTTCTCCAGCACAAGAAGCATCTCTTGGGGTTGATTTTGCCAAAATATACAAGGATTCAGAAATGTTTAGGAAGAATAAGGCATTGATAAAAGAACTAAGTAGTCCTGCACCAGATTCAAAAGACTTGTACTTTCCTACACGATATTCTCAGTCTTTCTTTACCCAGTGTATGGCTTGCCTGTGGAAACAATGTGTATCATACTGGCGACACCCTCAATACACTGCAGTGAGACTAATTTTCACGGCTATGATGGCTGTATTACTTGGATCATTTTTCTGGGATCTTGGCTCCAAAAGAGAAAAGCAAAGAGATCTCTTAAGTGCAATGGGTTCTATGTATGCTGCTGTGCTCTTTATTGGTATACAAAATTCATTATCAGTGCAGCCAGTCGTAGGTGTTGAGAAGTTGGTCTCTTACAGAGAAAGAGCTGCTGGAATGTACTCAGCTTTTCCATTTGCCTTTGGACAGGCTGTCATTGAGATCCCATACGCTTTGATCCAGAGTATCATATATGGGATTATAGTATACTCCATGATTGGATTTGAGTGGACCGTCAGCAAATTCTTTTATTATCTCATGTTCATGTACCTCACCTTCTTATACTTCACCTTCCATGGCATGATGATTGTGGCCATTACTCCCAACAACACCATCTCTGCAGTAGTTTCCTCCGCCTTCTATCCACTATGGAATGTTATTTCAGGATATCTCATACCCAAAACAAGAATTCCTATATGGTGGAGATGGTTCTATTGGGTTAGCCCGACCTCTTGGAGTTTGTATGGATTATTTGGTTCACAGTTTGGAGGCCTTATGGACACACTTGATGATTCTGGGGAAACTATAGATCATTTCACAAGGACATATTTTGGATATAGGAAAGACTTTCTAGGTGTTGTTGTTGCGGTGCTTGTTGGGTTTTCAGCATTCTTTATTTTCATCTTTGCTTTTGCAATCAAGAAACTGAACTTTCAAAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1414

Amino Acids

160.01

Weight (kDa)

6.58

Isoelectric Point (pI)

39.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 166 - 349 4.7e-17 ABC transporter
ABC2_membrane PF01061 503 - 715 8.7e-48 ABC-2 type transporter
PDR_assoc PF08370 720 - 782 6.8e-22 Plant PDR ABC transporter associated
ABC_tran PF00005 843 - 995 1e-20 ABC transporter
ABC2_membrane PF01061 1140 - 1354 1.2e-54 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3228
AccB1I GGYRCC 1 cut(s) 110
AccB7I CCANNNNNTGG 1 cut(s) 3427
AccI GTMKAC 3 cut(s) 1563, 3619, 3783
AciI CCGC 6 cut(s) 72, 75, 352, 3002, 3930, 4163
AcoI YGGCCR 2 cut(s) 1524, 3888
AcuI CTGAAG 6 cut(s) 366, 1404, 1473, 2294, 2529, 2549
AfaI GTAC 5 cut(s) 1029, 3064, 3386, 3698, 3845
AfiI CCNNNNNNNGG 6 cut(s) 56, 560, 1300, 2984, 3427, 3650
AflII CTTAAG 1 cut(s) 3574
AhdI GACNNNNNGTC 1 cut(s) 3728
AjnI CCWGG 3 cut(s) 553, 2554, 2884
AjuI GAANNNNNNNTTGG 6 cut(s) 230, 262, 3129, 3161, 3264, 3296
AleI CACNNNNGTG 1 cut(s) 3482
AloI GAACNNNNNNTCC 2 cut(s) 1760, 1792
Alw21I GWGCWC 1 cut(s) 3609
Alw26I GTCTC 7 cut(s) 115, 644, 1151, 2681, 2903, 3481, 3673
Ama87I CYCGRG 1 cut(s) 2790
AoxI GGCC 8 cut(s) 547, 1349, 1456, 1524, 2552, 2986, 3888, 4066
AseI ATTAAT 1 cut(s) 429
Asp700I GAANNNNTTC 3 cut(s) 1230, 1556, 3186
AspLEI GCGC 1 cut(s) 2591
AspS9I GGNCC 8 cut(s) 548, 1016, 1217, 1579, 1636, 1768, 3149, 3807
AsuC2I CCSGG 2 cut(s) 2791, 2792
AvaI CYCGRG 1 cut(s) 2790
AvaII GGWCC 7 cut(s) 1016, 1217, 1579, 1636, 1768, 3149, 3807
AxyI CCTNAGG 1 cut(s) 2481
BaeGI GKGCMC 1 cut(s) 1975
BaeI ACNNNNGTAYC 2 cut(s) 2297, 2330
BalI TGGCCA 2 cut(s) 1526, 3890
BamHI GGATCC 1 cut(s) 1821
BanI GGYRCC 1 cut(s) 110
BanII GRGCYC 1 cut(s) 1339
BarI GAAGNNNNNNTAC 4 cut(s) 1241, 1273, 3836, 3868
BbsI GAAGAC 2 cut(s) 245, 2636
Bbv12I GWGCWC 1 cut(s) 3609
BceAI ACGGC 1 cut(s) 3516
BcgI CGANNNNNNTGC 2 cut(s) 911, 945
BciT130I CCWGG 3 cut(s) 555, 2556, 2886
BciVI GTATCC 1 cut(s) 2702
BclI TGATCA 2 cut(s) 12, 1857
BcnI CCSGG 2 cut(s) 2791, 2792
BcoDI GTCTC 7 cut(s) 115, 644, 1151, 2681, 2903, 3481, 3673
BfaI CTAG 7 cut(s) 257, 750, 866, 1976, 2519, 2997, 4148
BfmI CTRYAG 6 cut(s) 1142, 1870, 3054, 3480, 3915, 4101
BfoI RGCGCY 1 cut(s) 2592
BfrI CTTAAG 1 cut(s) 3574
BfuI GTATCC 1 cut(s) 2702
BglI GCCNNNNNGGC 1 cut(s) 555
BglII AGATCT 2 cut(s) 829, 3568
BmcAI AGTACT 1 cut(s) 1029
Bme1390I CCNGG 5 cut(s) 555, 2556, 2791, 2792, 2886
Bme18I GGWCC 7 cut(s) 1016, 1217, 1579, 1636, 1768, 3149, 3807
BmeRI GACNNNNNGTC 1 cut(s) 3728
BmeT110I CYCGRG 1 cut(s) 2790
BmgT120I GGNCC 8 cut(s) 548, 1016, 1217, 1579, 1636, 1768, 3149, 3807
BmiI GGNNCC 7 cut(s) 67, 112, 550, 1219, 1769, 1823, 3547
BmrFI CCNGG 5 cut(s) 555, 2556, 2791, 2792, 2886
BmrI ACTGGG 2 cut(s) 1342, 3415
BmsI GCATC 8 cut(s) 410, 996, 2369, 2664, 2983, 3085, 3099, 3284
BmuI ACTGGG 2 cut(s) 1342, 3415
BpiI GAAGAC 2 cut(s) 245, 2636
BplI GAGNNNNNCTC 4 cut(s) 2348, 2380, 2966, 2998
BpmI CTGGAG 2 cut(s) 2577, 3246
Bpu10I CCTNAGC 1 cut(s) 78
BpuEI CTTGAG 2 cut(s) 281, 890
BpuMI CCSGG 2 cut(s) 2791, 2792
BsaAI YACGTR 2 cut(s) 132, 2112
BsaBI GATNNNNATC 3 cut(s) 834, 840, 1820
BsaI GGTCTC 2 cut(s) 2903, 3673
BsaJI CCNNGG 7 cut(s) 553, 2301, 2789, 2790, 2884, 2885, 3871
BsaWI WCCGGW 2 cut(s) 1018, 1638
BsaXI ACNNNNNCTCC 4 cut(s) 687, 717, 2187, 2217
Bsc4I CCNNNNNNNGG 6 cut(s) 56, 560, 1300, 2984, 3427, 3650
Bse1I ACTGG 6 cut(s) 741, 1337, 2249, 3421, 3464, 3644
Bse21I CCTNAGG 1 cut(s) 2481
Bse3DI GCAATG 2 cut(s) 1395, 3588
Bse8I GATNNNNATC 3 cut(s) 834, 840, 1820
BseBI CCWGG 3 cut(s) 555, 2556, 2886
BseDI CCNNGG 7 cut(s) 553, 2301, 2789, 2790, 2884, 2885, 3871
BseJI GATNNNNATC 3 cut(s) 834, 840, 1820
BseLI CCNNNNNNNGG 6 cut(s) 56, 560, 1300, 2984, 3427, 3650
BseMI GCAATG 2 cut(s) 1395, 3588
BseMII CTCAG 2 cut(s) 3419, 3714
BseNI ACTGG 6 cut(s) 741, 1337, 2249, 3421, 3464, 3644
BseRI GAGGAG 3 cut(s) 191, 194, 1178
BseSI GKGCMC 1 cut(s) 1975
BsgI GTGCAG 2 cut(s) 3348, 3659
BshFI GGCC 8 cut(s) 549, 1351, 1458, 1526, 2554, 2988, 3890, 4068
BshNI GGYRCC 1 cut(s) 110
BsiHKAI GWGCWC 1 cut(s) 3609
BsiHKCI CYCGRG 1 cut(s) 2790
BsiSI CCGG 5 cut(s) 57, 1019, 1639, 2791, 3233
BslFI GGGAC 5 cut(s) 885, 930, 1203, 1781, 2210
BslI CCNNNNNNNGG 6 cut(s) 56, 560, 1300, 2984, 3427, 3650
BsmAI GTCTC 7 cut(s) 115, 644, 1151, 2681, 2903, 3481, 3673
BsmBI CGTCTC 1 cut(s) 644
BsmFI GGGAC 5 cut(s) 885, 930, 1203, 1781, 2210
BsmI GAATGC 3 cut(s) 153, 2128, 4184
BsnI GGCC 8 cut(s) 549, 1351, 1458, 1526, 2554, 2988, 3890, 4068
Bso31I GGTCTC 2 cut(s) 2903, 3673
BsoBI CYCGRG 1 cut(s) 2790
Bsp1286I GDGCHC 3 cut(s) 1339, 1975, 3609
Bsp19I CCATGG 1 cut(s) 3871
BspACI CCGC 6 cut(s) 72, 75, 352, 3002, 3930, 4163
BspANI GGCC 8 cut(s) 549, 1351, 1458, 1526, 2554, 2988, 3890, 4068
BspCNI CTCAG 2 cut(s) 3418, 3713
BspHI TCATGA 2 cut(s) 9, 499
BspLI GGNNCC 7 cut(s) 67, 112, 550, 1219, 1769, 1823, 3547
BspMAI CTGCAG 3 cut(s) 1146, 3484, 3919
BspT107I GGYRCC 1 cut(s) 110
BspTI CTTAAG 1 cut(s) 3574
BspTNI GGTCTC 2 cut(s) 2903, 3673
BsrDI GCAATG 2 cut(s) 1395, 3588
BsrI ACTGG 6 cut(s) 741, 1337, 2249, 3421, 3464, 3644
BssECI CCNNGG 7 cut(s) 553, 2301, 2789, 2790, 2884, 2885, 3871
BssNAI GTATAC 2 cut(s) 3620, 3784
BssT1I CCWWGG 2 cut(s) 2301, 3871
Bst1107I GTATAC 2 cut(s) 3620, 3784
Bst2UI CCWGG 3 cut(s) 555, 2556, 2886
Bst6I CTCTTC 3 cut(s) 1175, 1541, 2525
BstAFI CTTAAG 1 cut(s) 3574
BstBAI YACGTR 2 cut(s) 132, 2112
BstC8I GCNNGC 4 cut(s) 1149, 2236, 2698, 3433
BstDEI CTNAG 5 cut(s) 78, 2481, 3353, 3405, 3700
BstDSI CCRYGG 1 cut(s) 3871
BstENI CCTNNNNNAGG 1 cut(s) 1298
BstH2I RGCGCY 1 cut(s) 2592
BstHHI GCGC 1 cut(s) 2591
BstMAI GTCTC 7 cut(s) 115, 644, 1151, 2681, 2903, 3481, 3673
BstNI CCWGG 3 cut(s) 555, 2556, 2886
BstSCI CCNGG 5 cut(s) 553, 2554, 2789, 2790, 2884
BstSFI CTRYAG 6 cut(s) 1142, 1870, 3054, 3480, 3915, 4101
BstSLI GKGCMC 1 cut(s) 1975
BstSNI TACGTA 1 cut(s) 132
BstV2I GAAGAC 2 cut(s) 245, 2636
BstX2I RGATCY 5 cut(s) 829, 1821, 3538, 3568, 3738
BstXI CCANNNNNNTGG 1 cut(s) 2608
BstYI RGATCY 5 cut(s) 829, 1821, 3538, 3568, 3738
BstZ17I GTATAC 2 cut(s) 3620, 3784
Bsu36I CCTNAGG 1 cut(s) 2481
BsuI GTATCC 1 cut(s) 2702
BsuRI GGCC 8 cut(s) 549, 1351, 1458, 1526, 2554, 2988, 3890, 4068
BtgI CCRYGG 1 cut(s) 3871
BtsI GCAGTG 2 cut(s) 3477, 3489
BtsIMutI CAGTG 9 cut(s) 729, 734, 1879, 2745, 3042, 3428, 3477, 3489, 3642
Cac8I GCNNGC 4 cut(s) 1149, 2236, 2698, 3433
CciI TCATGA 2 cut(s) 9, 499
CfoI GCGC 1 cut(s) 2591
Cfr13I GGNCC 8 cut(s) 548, 1016, 1217, 1579, 1636, 1768, 3149, 3807
Cfr9I CCCGGG 1 cut(s) 2790
Csp6I GTAC 5 cut(s) 1028, 3063, 3385, 3697, 3844
CviQI GTAC 5 cut(s) 1028, 3063, 3385, 3697, 3844
DdeI CTNAG 5 cut(s) 78, 2481, 3353, 3405, 3700
DraI TTTAAA 1 cut(s) 366
DriI GACNNNNNGTC 1 cut(s) 3728
EaeI YGGCCR 2 cut(s) 1524, 3888
Eam1104I CTCTTC 3 cut(s) 1175, 1541, 2525
Eam1105I GACNNNNNGTC 1 cut(s) 3728
EarI CTCTTC 3 cut(s) 1175, 1541, 2525
EciI GGCGGA 1 cut(s) 3919
Eco105I TACGTA 1 cut(s) 132
Eco130I CCWWGG 2 cut(s) 2301, 3871
Eco147I AGGCCT 3 cut(s) 1351, 2554, 4068
Eco24I GRGCYC 1 cut(s) 1339
Eco31I GGTCTC 2 cut(s) 2903, 3673
Eco32I GATATC 2 cut(s) 1047, 3965
Eco47I GGWCC 7 cut(s) 1016, 1217, 1579, 1636, 1768, 3149, 3807
Eco57I CTGAAG 6 cut(s) 366, 1404, 1473, 2294, 2529, 2549
Eco81I CCTNAGG 1 cut(s) 2481
Eco88I CYCGRG 1 cut(s) 2790
EcoNI CCTNNNNNAGG 1 cut(s) 1298
EcoO109I RGGNCCY 2 cut(s) 548, 1217
EcoRI GAATTC 3 cut(s) 1238, 1552, 3984
EcoRII CCWGG 3 cut(s) 553, 2554, 2884
EcoRV GATATC 2 cut(s) 1047, 3965
EcoT14I CCWWGG 2 cut(s) 2301, 3871
EcoT38I GRGCYC 1 cut(s) 1339
ErhI CCWWGG 2 cut(s) 2301, 3871
Esp3I CGTCTC 1 cut(s) 644
FalI AAGNNNNNCTT 2 cut(s) 3264, 3296
FaqI GGGAC 5 cut(s) 885, 930, 1203, 1781, 2210
FauNDI CATATG 1 cut(s) 1728
FbaI TGATCA 2 cut(s) 12, 1857
FblI GTMKAC 3 cut(s) 1563, 3619, 3783
FriOI GRGCYC 1 cut(s) 1339
FspBI CTAG 7 cut(s) 257, 750, 866, 1976, 2519, 2997, 4148
GlaI GCGC 1 cut(s) 2590
GsuI CTGGAG 2 cut(s) 2577, 3246
HaeII RGCGCY 1 cut(s) 2592
HaeIII GGCC 8 cut(s) 549, 1351, 1458, 1526, 2554, 2988, 3890, 4068
HapII CCGG 5 cut(s) 57, 1019, 1639, 2791, 3233
HhaI GCGC 1 cut(s) 2591
Hin6I GCGC 1 cut(s) 2589
HinP1I GCGC 1 cut(s) 2589
HincII GTYRAC 2 cut(s) 695, 1476
HindII GTYRAC 2 cut(s) 695, 1476
HindIII AAGCTT 2 cut(s) 381, 1515
HpaII CCGG 5 cut(s) 57, 1019, 1639, 2791, 3233
Hpy99I CGWCG 1 cut(s) 65
HpyCH4IV ACGT 6 cut(s) 131, 186, 772, 1104, 1842, 2111
HpyF3I CTNAG 5 cut(s) 78, 2481, 3353, 3405, 3700
HpySE526I ACGT 6 cut(s) 131, 186, 772, 1104, 1842, 2111
HspAI GCGC 1 cut(s) 2589
Ksp22I TGATCA 2 cut(s) 12, 1857
LmnI GCTCC 5 cut(s) 65, 1673, 2652, 2839, 3551
LweI GCATC 8 cut(s) 410, 996, 2369, 2664, 2983, 3085, 3099, 3284
MaeI CTAG 7 cut(s) 257, 750, 866, 1976, 2519, 2997, 4148
MaeII ACGT 6 cut(s) 131, 186, 772, 1104, 1842, 2111
MaeIII GTNAC 9 cut(s) 631, 889, 1303, 1363, 1600, 1735, 2743, 2864, 3253
MfeI CAATTG 3 cut(s) 2325, 2928, 3009
MflI RGATCY 5 cut(s) 829, 1821, 3538, 3568, 3738
MhlI GDGCHC 3 cut(s) 1339, 1975, 3609
MlsI TGGCCA 2 cut(s) 1526, 3890
MluNI TGGCCA 2 cut(s) 1526, 3890
MlyI GAGTC 5 cut(s) 92, 97, 912, 984, 2765
Mox20I TGGCCA 2 cut(s) 1526, 3890
MroXI GAANNNNTTC 3 cut(s) 1230, 1556, 3186
MscI TGGCCA 2 cut(s) 1526, 3890
MseI TTAA 6 cut(s) 365, 429, 797, 1116, 1443, 3575
MslI CAYNNNNRTG 8 cut(s) 279, 366, 1811, 1853, 2606, 3482, 3503, 3839
Msp20I TGGCCA 2 cut(s) 1526, 3890
MspCI CTTAAG 1 cut(s) 3574
MspI CCGG 5 cut(s) 57, 1019, 1639, 2791, 3233
MspR9I CCNGG 5 cut(s) 555, 2556, 2791, 2792, 2886
MunI CAATTG 3 cut(s) 2325, 2928, 3009
Mva1269I GAATGC 3 cut(s) 153, 2128, 4184
MvaI CCWGG 3 cut(s) 555, 2556, 2886
NciI CCSGG 2 cut(s) 2791, 2792
NcoI CCATGG 1 cut(s) 3871
NdeI CATATG 1 cut(s) 1728
NlaIV GGNNCC 7 cut(s) 67, 112, 550, 1219, 1769, 1823, 3547
NmuCI GTSAC 4 cut(s) 1303, 1735, 2743, 2864
OliI CACNNNNGTG 1 cut(s) 3482
PagI TCATGA 2 cut(s) 9, 499
PasI CCCWGGG 1 cut(s) 2885
PceI AGGCCT 3 cut(s) 1351, 2554, 4068
PctI GAATGC 3 cut(s) 153, 2128, 4184
PdmI GAANNNNTTC 3 cut(s) 1230, 1556, 3186
PfeI GAWTC 7 cut(s) 217, 444, 2801, 2880, 3311, 3371, 4088
PflMI CCANNNNNTGG 1 cut(s) 3427
PleI GAGTC 5 cut(s) 91, 96, 912, 984, 2764
PpsI GAGTC 5 cut(s) 91, 96, 912, 984, 2764
Ppu21I YACGTR 2 cut(s) 132, 2112
PpuMI RGGWCCY 1 cut(s) 1217
PshBI ATTAAT 1 cut(s) 429
PsiI TTATAA 1 cut(s) 3228
Psp5II RGGWCCY 1 cut(s) 1217
Psp6I CCWGG 3 cut(s) 553, 2554, 2884
PspGI CCWGG 3 cut(s) 553, 2554, 2884
PspN4I GGNNCC 7 cut(s) 67, 112, 550, 1219, 1769, 1823, 3547
PspPI GGNCC 8 cut(s) 548, 1016, 1217, 1579, 1636, 1768, 3149, 3807
PspPPI RGGWCCY 1 cut(s) 1217
PstI CTGCAG 3 cut(s) 1146, 3484, 3919
PsuI RGATCY 5 cut(s) 829, 1821, 3538, 3568, 3738
RsaI GTAC 5 cut(s) 1029, 3064, 3386, 3698, 3845
RsaNI GTAC 5 cut(s) 1028, 3063, 3385, 3697, 3844
RseI CAYNNNNRTG 8 cut(s) 279, 366, 1811, 1853, 2606, 3482, 3503, 3839
SaqAI TTAA 6 cut(s) 365, 429, 797, 1116, 1443, 3575
Sau96I GGNCC 8 cut(s) 548, 1016, 1217, 1579, 1636, 1768, 3149, 3807
ScaI AGTACT 1 cut(s) 1029
SchI GAGTC 5 cut(s) 92, 97, 912, 984, 2765
ScrFI CCNGG 5 cut(s) 555, 2556, 2791, 2792, 2886
SduI GDGCHC 3 cut(s) 1339, 1975, 3609
SfaNI GCATC 8 cut(s) 410, 996, 2369, 2664, 2983, 3085, 3099, 3284
SfcI CTRYAG 6 cut(s) 1142, 1870, 3054, 3480, 3915, 4101
SinI GGWCC 7 cut(s) 1016, 1217, 1579, 1636, 1768, 3149, 3807
SmaI CCCGGG 1 cut(s) 2792
SmiI ATTTAAAT 1 cut(s) 366
SmiMI CAYNNNNRTG 8 cut(s) 279, 366, 1811, 1853, 2606, 3482, 3503, 3839
SmlI CTYRAG 3 cut(s) 296, 905, 3574
SmoI CTYRAG 3 cut(s) 296, 905, 3574
SnaBI TACGTA 1 cut(s) 132
SseBI AGGCCT 3 cut(s) 1351, 2554, 4068
SsiI CCGC 6 cut(s) 72, 75, 352, 3002, 3930, 4163
SspI AATATT 2 cut(s) 265, 2964
SspMI CTAG 7 cut(s) 257, 750, 866, 1976, 2519, 2997, 4148
StuI AGGCCT 3 cut(s) 1351, 2554, 4068
StyD4I CCNGG 5 cut(s) 553, 2554, 2789, 2790, 2884
StyI CCWWGG 2 cut(s) 2301, 3871
SwaI ATTTAAAT 1 cut(s) 366
TaiI ACGT 6 cut(s) 134, 189, 775, 1107, 1845, 2114
TaqI TCGA 8 cut(s) 86, 425, 921, 1173, 1960, 2451, 2957, 3180
TatI WGTACW 3 cut(s) 1027, 3384, 3696
TauI GCSGC 2 cut(s) 77, 3005
TfiI GAWTC 7 cut(s) 217, 444, 2801, 2880, 3311, 3371, 4088
Tru1I TTAA 6 cut(s) 365, 429, 797, 1116, 1443, 3575
Tru9I TTAA 6 cut(s) 365, 429, 797, 1116, 1443, 3575
TscAI CASTG 9 cut(s) 729, 741, 1879, 2752, 3042, 3428, 3484, 3489, 3642
TseFI GTSAC 4 cut(s) 1303, 1735, 2743, 2864
Tsp45I GTSAC 4 cut(s) 1303, 1735, 2743, 2864
TspGWI ACGGA 3 cut(s) 78, 668, 1134
TspMI CCCGGG 1 cut(s) 2790
TspRI CASTG 9 cut(s) 729, 741, 1879, 2752, 3042, 3428, 3484, 3489, 3642
Van91I CCANNNNNTGG 1 cut(s) 3427
Vha464I CTTAAG 1 cut(s) 3574
VpaK11BI GGWCC 7 cut(s) 1016, 1217, 1579, 1636, 1768, 3149, 3807
VspI ATTAAT 1 cut(s) 429
XagI CCTNNNNNAGG 1 cut(s) 1298
XcmI CCANNNNNNNNNTGG 1 cut(s) 1946
XmaI CCCGGG 1 cut(s) 2790
XmiI GTMKAC 3 cut(s) 1563, 3619, 3783
XmnI GAANNNNTTC 3 cut(s) 1230, 1556, 3186
XspI CTAG 7 cut(s) 257, 750, 866, 1976, 2519, 2997, 4148
ZrmI AGTACT 1 cut(s) 1029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.