pycom02g02690
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
1674792 .. 1681074
6283 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g02690.18

Sequence Viewer

Length: 4164 bp
ATGACGTCATGGGCTGCTTTAGAGCGACTGCCGACGCGCTCGAGAGCAAGGAGAGGTATTCTGCTCGCGGAAGATCAAGAACACAACAGAGAGATTGATGTGAAGGAACTTGGATTAGTAGAAAGGAAAAACGTTTTGGAGAGGCTTATCCAGATTAATAATTCAAACCAAGATGAAACTAGTAATAATCCCACGTTCTTGCTCAAGCTCAAGGACCGCATGAACAGAGTTGGACTTGAATTTCCAACAACTGAGGTGCGGTTCGAGCATTTGAACGTTGAAGCAGAAGCTCACGTAGGAAGCAGGGCATCGCTTTCAATCCTCAACTTCTCCCTTAATATCTTAGAGGGGTTCCTGAAATGCTTTCACATTCTTACAAGTAAGAAGAAGCCAGTGTCGATCCTCCACGATGCAAGTGGGATTATCAAGCCAAGAAGAATGACACTTCTTTTAGGGCCCCCGGGCTCTGGAAAGACCACATTACTATTGGCATTGGCCGGAAAACTTAGCAAACACCATCTAAAACTTTCGGGGAGAGTTACATACAACGGACAAGGGATGGAGGAGTTTGTGCCGCAGAGGGCGGCAGCTTATGTTAGCCAACACGATCTCCACTTACCGGAATTGACAGTGAGGGAAACACTGGCTTTTTCAGCGAGATGTCATGGTGTTGGGCCGCGCTATGAATTGTTGGTAGAATTATTGAGAAGAGAGAAGGCTGCAAATGTCATGCCGGATCTTGATCTTGATCTAATCATGAAGGCAGCGGTACTAGAAGGACGGGAAGCCAATACAGTTACAGACTTAATACTCAAGGTTTTGAGACTGGAAGCTTGTGCTGACACCGTTGTAGGGGACGAAATGACCAGAGGCATATCTGGTGGACAAAAAAAGCGAGTCACGACAGGGGAGATGCTAGTCGGACCAGAAGGAGTACTTTTTATGGATGAGATATCGACTGGTCTGGACAGTTCTACAACATTTCAAATAGTGAATTCGCTGCGTCATTGTGTCTACATCCTCAATGGAACTGCATTAATCGCTCTCCTGCAGCCAGCACCGGAGACGTATGATCTTTTCGATGACATAATTCTCCTCTCGGATGGATACATTGTGTATCAAGGTCCCTGCGAGAATGTGATCGAGTTCTTTGAGCACATGGGATTCAAATGTCCCCAGAGGAAAGGAGTCGCCGATTTCTTACAAGAAGTGACATCAAGGAAAGACCAAGAGCAATACTGGGTCTATAGAGATAAGCCTCATGGCTTTGTAACTCCCAAAGAGTTTTCTGAAGCAATGAATTCGTTTCACATTGGTCAAAAACTCGGCGATGAGCTTGCTATTCCATTTAACAAGTCTGAAGGCCACCCTTTGGATTTAACAACTAAGAAGTACGGTGCTAGCAACAAGGAACTGTTAAAAGCTTGTATGGACAGACAAATTATTCTTATGAAGCGGAATAAATTCGTCTACGTTTTCAAATTGGTGCAGCTTATTGTAGCTGCTTTTGTAACGACGACGTTATTCCTACGCACTGAGATGCACCGGAATACAGCAGCAGATGGTGGAATTTATATGGGAGCTATGTTCTTTACACTGCTATCAATCATGTTCAATGGGTTTGCGGAGCTGCACATGACTGTTGAGAGACTTCCGGCCTTTTACAAGCAAAGGGACGATTTGTTCTATCCAGCTTGGGTGTATACTCTACCTCAATGGATGATACGGATCCCTATGACATTTGTGGAAGTCTCCATTTGGATGCTCATCACTTACTATCCCATCGGTTATGATCCAAGCTTCGCAAGGTTTTTCAAGCAGTTCCTTGTGCTAGCGAGCATTAGCCAGATGGCAAATGGACTTTTTCGATTGATAGGGGTAGTAGGAAGGAACATAACTGCTGCAAATACATTCGGGTTTGTTGCTTTCCTCGTCATTCTTGGTCTGAGCGGCTTTGTTTTACCACGAGACGATATGAACAAGTGGACGTTGTGGGGATATTATCTCTCACCGTTCACATACGGACTGAATGCAATGGCTGTAAATGAATTTCTGGGAAAAAGTTGGAGACATGTTCCTGCAAACTCAGCAGAAGCGTTAGGAGTTATAGTCTTGAAGTCTCAAGGAGTATCTCCAGAAGCACGTTGGTATTGGATTGGAGTGGCAGCTTTGATCGGATTTACTCTTCTATTCAACTTCCTTTTCACGTTTGCACTTGAGTATCTTGATCCATTTGAAGAGCCCCGTGCAGCATCAGAAGTGTCCAATGAGGCTTTGACTGCGGTATCAGAGGGAAGCAACATGGAAGCCAATAGTACAAAGAGGCAGCGCGGAATGGTTCTGCCTTTTCAACCTCTTTCGGTTACTTTTAATGAAATACGATATGCGATTGACATGCCTCATGAAAAGAAAGTTCAAGGCATAAGTAATGAAGGCTTCCGGAAAGAAATTCTCAAGGGTGTGAGTGGAACTTTTAGGCCAGCAGTCTTGACAGCCCTAATGGGTATTAGTGGCGCAGGTAAAACCACTCTACTGGATGTTTTGGCAGGTAGGAAAACCAGTGGACATATCAAGGGTAGCATCACAATATCCGGATATCCAAAAAACCAAGACACATTTGCTCGCGTAACAGGATACTGCGAGCAAACAGATATCCACTCTCCTCATGTTGCAGTGTACGAGTCTTTGGTTTACTCTGCATGGCTCCGGTTACCCCCTGAGGTTGATTCCCGCAGCAGAAGGATGTTCATCGAGGAAGTAATGGAGCTTGTGGAATTGACTCCAATACGCAACGCACTTGTTGGATTGCCTGGTGTGAATGGTCTCTCAACGGAGCAGCGCAAAAGGCTAACAATTGCGGTAGAGCTTGTTGCCAACCCATCCATCATATTTATGGATGAGCCGACCTCTGGCCTTGATGCCAGGGCAGCAGCAATTGTAATGAGAACGGTGAGAAATACAGTGGACACTGGGAGGACCGTAGTCTGCACCATCCACCAGCCAAGCATTGATATATTCGATGCTTTCGATGAGATGCTCCTCTTGAAAGAGGGAGGCGAAGAAATATACGTTGGCCCTTTAGGCCACCATTCTTCCAAGTTGATCGAATACTTTGAGGGGATTAATGGAGTTCCAAAAATAAAGGATGGTTACAATCCGGCAACATGGATGTTGGAGGTTACTTCTGCAGCACAAGAAGCAGCGCTCGGGGTTAATTTCGCTGAAATATACAAGAACTCAGAAATATACGGGAGAAACAAGGCCTTGATCAAGGAGCTAAGCACCCCTGCACCAAATTCGAAAGACTTGTACTTCCCGTCACAATATTCTCAATCGTTCTTTACCCAGTGTCGAGCTTGCTTATGGAAGCAACACATATCATATTGGCGAAACCCGCAATATAGTGCAATGAAGCTGTTTTACACAGCTATGATGGCTTTACTCTTTGGAACAATTTTCTGGGATCTTGGCACCAAAAGGAAAAGGGAAAGAGATCTTCTTAACGCAATCGGTTCAATGTATGCTGCTGTTCTCTTCATTGGGATACAAAACTCCTTAGCAGTGCAGCCAGTCGTAGGCATCGAGAGGATGGTATCTTACAGAGAAAGGGCTGCTGGGATGTACTCGGCGTTTCCATTTGCCTTCGGACAGGCCGTCATTGAGATTCCATACACGTTGATCCAAACTATCATCTACGGAGTTATAGTGTACACAATGGTCGGATTTGAGTGGACGGTCAGCAAATTCTTTTTGTATCTCTTCTTCATGTGCTTCACCTTCTTGTACTTCACCTTCCATGGCATGATGGCAGTGGCCATCACTCCCAATAACACCATCTCTATCGTTGTTTCATCCGCTTTCTATCCGCTATGGAACGTTATTTCCGGATATCTCATTCCCAAAACAAGAATTCCAATATGGTGGAGATGGTTCTACTGGATTAGCCCGACATCATGGAGCTTGTACGGCTTGTTTTCTTCACAATTTGGAGGCATCACGGACAGACTTGATTCCGGCGAAACTGTGGATGAATTTATGAGGTCTTATTTTGGGTATAGGAACGACTTTGTAGGCATTGTTGCAACTGTGTTAGTCGGATTTTCAGTGCTATTTGTTTTCGTCTTTGCCTTAGGAATCAAAAAATTGAACTACCAAAAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1388

Amino Acids

156.46

Weight (kDa)

8.29

Isoelectric Point (pI)

35.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 8
Acc36I ACCTGC 2 cut(s) 2507, 2537
AccB1I GGYRCC 1 cut(s) 3470
AccB7I CCANNNNNTGG 1 cut(s) 1372
AccBSI CCGCTC 1 cut(s) 1950
AccI GTMKAC 3 cut(s) 1014, 1470, 1703
AccII CGCG 5 cut(s) 37, 68, 679, 2331, 2625
AccIII TCCGGA 3 cut(s) 2439, 2591, 3884
AclI AACGTT 3 cut(s) 132, 276, 3876
AclWI GGATC 8 cut(s) 394, 744, 1723, 1736, 1787, 2222, 3471, 3673
AcoI YGGCCR 2 cut(s) 495, 3813
AcuI CTGAAG 2 cut(s) 1311, 1380
AcyI GRCGYC 1 cut(s) 5
AfeI AGCGCT 1 cut(s) 3204
AfiI CCNNNNNNNGG 6 cut(s) 467, 619, 852, 1372, 2909, 3575
AflIII ACRYGT 2 cut(s) 2071, 3672
AhdI GACNNNNNGTC 1 cut(s) 3653
AhlI ACTAGT 1 cut(s) 179
AjnI CCWGG 2 cut(s) 2809, 2921
AjuI GAANNNNNNNTTGG 4 cut(s) 119, 151, 3054, 3086
AloI GAACNNNNNNTCC 4 cut(s) 1667, 1699, 3866, 3898
Alw21I GWGCWC 1 cut(s) 1158
Alw26I GTCTC 8 cut(s) 817, 1058, 1642, 1756, 1962, 2062, 2124, 2828
AlwI GGATC 8 cut(s) 394, 744, 1723, 1736, 1787, 2222, 3471, 3673
Ama87I CYCGRG 3 cut(s) 40, 460, 3206
Aor13HI TCCGGA 3 cut(s) 2439, 2591, 3884
Aor51HI AGCGCT 1 cut(s) 3204
ApaI GGGCCC 1 cut(s) 459
AseI ATTAAT 3 cut(s) 156, 1037, 3123
Asp700I GAANNNNTTC 1 cut(s) 1463
AspLEI GCGC 6 cut(s) 39, 681, 2331, 2516, 2841, 3205
AspS9I GGNCC 8 cut(s) 214, 455, 456, 674, 923, 1124, 2976, 3074
AsuC2I CCSGG 2 cut(s) 461, 462
AsuHPI GGTGA 4 cut(s) 2001, 2962, 3766, 3781
AsuII TTCGAA 1 cut(s) 3299
AsuNHI GCTAGC 2 cut(s) 1400, 1831
AvaI CYCGRG 3 cut(s) 40, 460, 3206
AvaII GGWCC 4 cut(s) 214, 923, 1124, 2976
AxyI CCTNAGG 2 cut(s) 2718, 4129
BaeGI GKGCMC 1 cut(s) 459
BaeI ACNNNNGTAYC 4 cut(s) 2204, 2237, 2268, 2301
BalI TGGCCA 1 cut(s) 3815
BamHI GGATCC 1 cut(s) 1728
BanI GGYRCC 1 cut(s) 3470
BanII GRGCYC 3 cut(s) 459, 467, 2244
BarI GAAGNNNNNNTAC 6 cut(s) 3404, 3436, 3746, 3776, 3778, 3808
BauI CACGAG 1 cut(s) 1965
Bbv12I GWGCWC 1 cut(s) 1158
BceAI ACGGC 2 cut(s) 3638, 3982
BcgI CGANNNNNNTGC 8 cut(s) 1284, 1318, 1319, 1353, 2377, 2411, 3279, 3313
BciT130I CCWGG 2 cut(s) 2811, 2923
BciVI GTATCC 3 cut(s) 1100, 2627, 3537
BclI TGATCA 1 cut(s) 3267
BcnI CCSGG 2 cut(s) 461, 462
BcoDI GTCTC 8 cut(s) 817, 1058, 1642, 1756, 1962, 2062, 2124, 2828
BcuI ACTAGT 1 cut(s) 179
BfaI CTAG 5 cut(s) 180, 773, 917, 1401, 1832
BfmI CTRYAG 3 cut(s) 1049, 1246, 3186
BfoI RGCGCY 1 cut(s) 3206
BfuAI ACCTGC 2 cut(s) 2507, 2537
BfuI GTATCC 3 cut(s) 1100, 2627, 3537
BglI GCCNNNNNGGC 1 cut(s) 3081
BglII AGATCT 1 cut(s) 3493
BlpI GCTNAGC 1 cut(s) 3278
BmcAI AGTACT 1 cut(s) 936
Bme1390I CCNGG 4 cut(s) 461, 462, 2811, 2923
Bme18I GGWCC 4 cut(s) 214, 923, 1124, 2976
BmeRI GACNNNNNGTC 1 cut(s) 3653
BmeT110I CYCGRG 3 cut(s) 40, 460, 3206
BmgT120I GGNCC 8 cut(s) 214, 455, 456, 674, 923, 1124, 2976, 3074
BmiI GGNNCC 7 cut(s) 353, 457, 458, 1126, 1730, 2705, 3472
BmrFI CCNGG 4 cut(s) 461, 462, 2811, 2923
BmrI ACTGGG 3 cut(s) 1249, 2979, 3340
BmtI GCTAGC 2 cut(s) 1404, 1835
BmuI ACTGGG 3 cut(s) 1249, 2979, 3340
BoxI GACNNNNGTC 1 cut(s) 2981
BplI GAGNNNNNCTC 2 cut(s) 2891, 2923
BpmI CTGGAG 1 cut(s) 2118
Bpu10I CCTNAGC 1 cut(s) 3556
Bpu1102I GCTNAGC 1 cut(s) 3278
Bpu14I TTCGAA 1 cut(s) 3299
BpuEI CTTGAG 6 cut(s) 188, 194, 797, 2106, 2237, 2438
BpuMI CCSGG 2 cut(s) 461, 462
BsaAI YACGTR 1 cut(s) 295
BsaBI GATNNNNATC 5 cut(s) 741, 747, 1727, 1766, 2747
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 2828
BsaJI CCNNGG 4 cut(s) 459, 460, 2922, 3796
BsaWI WCCGGW 7 cut(s) 619, 1060, 1545, 2439, 2591, 2706, 3884
BsaXI ACNNNNNCTCC 6 cut(s) 594, 624, 2094, 2124, 3690, 3720
Bsc4I CCNNNNNNNGG 6 cut(s) 467, 619, 852, 1372, 2909, 3575
Bse21I CCTNAGG 2 cut(s) 2718, 4129
Bse3DI GCAATG 3 cut(s) 1302, 2040, 3414
Bse8I GATNNNNATC 5 cut(s) 741, 747, 1727, 1766, 2747
BseAI TCCGGA 3 cut(s) 2439, 2591, 3884
BseBI CCWGG 2 cut(s) 2811, 2923
BseDI CCNNGG 4 cut(s) 459, 460, 2922, 3796
BseJI GATNNNNATC 5 cut(s) 741, 747, 1727, 1766, 2747
BseLI CCNNNNNNNGG 6 cut(s) 467, 619, 852, 1372, 2909, 3575
BseMI GCAATG 3 cut(s) 1302, 2040, 3414
BseMII CTCAG 6 cut(s) 243, 1527, 1937, 2100, 2709, 3252
BseRI GAGGAG 4 cut(s) 578, 1085, 2652, 3029
BseSI GKGCMC 1 cut(s) 459
BseYI CCCAGC 1 cut(s) 3614
BsgI GTGCAG 6 cut(s) 1508, 1616, 2268, 2971, 3273, 3584
Bsh1236I CGCG 5 cut(s) 37, 68, 679, 2331, 2625
BshNI GGYRCC 1 cut(s) 3470
BsiHKAI GWGCWC 1 cut(s) 1158
BsiHKCI CYCGRG 3 cut(s) 40, 460, 3206
BslFI GGGAC 4 cut(s) 869, 1110, 1158, 1688
BslI CCNNNNNNNGG 6 cut(s) 467, 619, 852, 1372, 2909, 3575
BsmAI GTCTC 8 cut(s) 817, 1058, 1642, 1756, 1962, 2062, 2124, 2828
BsmBI CGTCTC 2 cut(s) 1058, 1962
BsmFI GGGAC 4 cut(s) 869, 1110, 1158, 1688
BsmI GAATGC 1 cut(s) 2035
Bso31I GGTCTC 1 cut(s) 2828
BsoBI CYCGRG 3 cut(s) 40, 460, 3206
Bsp119I TTCGAA 1 cut(s) 3299
Bsp120I GGGCCC 1 cut(s) 455
Bsp1286I GDGCHC 4 cut(s) 459, 467, 1158, 2244
Bsp13I TCCGGA 3 cut(s) 2439, 2591, 3884
Bsp1407I TGTACA 1 cut(s) 3708
Bsp1720I GCTNAGC 1 cut(s) 3278
Bsp19I CCATGG 1 cut(s) 3796
BspCNI CTCAG 6 cut(s) 244, 1528, 1938, 2099, 2710, 3251
BspEI TCCGGA 3 cut(s) 2439, 2591, 3884
BspFNI CGCG 5 cut(s) 37, 68, 679, 2331, 2625
BspHI TCATGA 2 cut(s) 756, 2401
BspLI GGNNCC 7 cut(s) 353, 457, 458, 1126, 1730, 2705, 3472
BspMAI CTGCAG 2 cut(s) 1053, 3190
BspMI ACCTGC 2 cut(s) 2507, 2537
BspOI GCTAGC 2 cut(s) 1404, 1835
BspPI GGATC 8 cut(s) 394, 744, 1723, 1736, 1787, 2222, 3471, 3673
BspQI GCTCTTC 1 cut(s) 2232
BspT104I TTCGAA 1 cut(s) 3299
BspT107I GGYRCC 1 cut(s) 3470
BspTNI GGTCTC 1 cut(s) 2828
BsrBI CCGCTC 1 cut(s) 1950
BsrDI GCAATG 3 cut(s) 1302, 2040, 3414
BsrGI TGTACA 1 cut(s) 3708
BssECI CCNNGG 4 cut(s) 459, 460, 2922, 3796
BssNAI GTATAC 1 cut(s) 1704
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1965
BssT1I CCWWGG 1 cut(s) 3796
Bst1107I GTATAC 1 cut(s) 1704
Bst2BI CACGAG 1 cut(s) 1965
Bst2UI CCWGG 2 cut(s) 2811, 2923
Bst6I CTCTTC 5 cut(s) 703, 2190, 2232, 3539, 3764
BstACI GRCGYC 1 cut(s) 5
BstAUI TGTACA 1 cut(s) 3708
BstBAI YACGTR 1 cut(s) 295
BstBI TTCGAA 1 cut(s) 3299
BstDSI CCRYGG 1 cut(s) 3796
BstEII GGTNACC 1 cut(s) 2709
BstFNI CGCG 5 cut(s) 37, 68, 679, 2331, 2625
BstH2I RGCGCY 1 cut(s) 3206
BstHHI GCGC 6 cut(s) 39, 681, 2331, 2516, 2841, 3205
BstMAI GTCTC 8 cut(s) 817, 1058, 1642, 1756, 1962, 2062, 2124, 2828
BstNI CCWGG 2 cut(s) 2811, 2923
BstNSI RCATGY 2 cut(s) 2075, 2398
BstPAI GACNNNNGTC 1 cut(s) 2981
BstPI GGTNACC 1 cut(s) 2709
BstSCI CCNGG 4 cut(s) 459, 460, 2809, 2921
BstSFI CTRYAG 3 cut(s) 1049, 1246, 3186
BstSLI GKGCMC 1 cut(s) 459
BstUI CGCG 5 cut(s) 37, 68, 679, 2331, 2625
BstX2I RGATCY 4 cut(s) 736, 1728, 3463, 3493
BstXI CCANNNNNNTGG 2 cut(s) 2533, 3921
BstYI RGATCY 4 cut(s) 736, 1728, 3463, 3493
BstZ17I GTATAC 1 cut(s) 1704
Bsu36I CCTNAGG 2 cut(s) 2718, 4129
BsuI GTATCC 3 cut(s) 1100, 2627, 3537
BtgI CCRYGG 1 cut(s) 3796
BtgZI GCGATG 2 cut(s) 294, 1344
BtsI GCAGTG 4 cut(s) 1595, 2679, 3567, 3816
BveI ACCTGC 2 cut(s) 2507, 2537
CciI TCATGA 2 cut(s) 756, 2401
CfoI GCGC 6 cut(s) 39, 681, 2331, 2516, 2841, 3205
Cfr13I GGNCC 8 cut(s) 214, 455, 456, 674, 923, 1124, 2976, 3074
Cfr9I CCCGGG 1 cut(s) 460
CseI GACGC 2 cut(s) 43, 992
DriI GACNNNNNGTC 1 cut(s) 3653
EaeI YGGCCR 2 cut(s) 495, 3813
Eam1104I CTCTTC 5 cut(s) 703, 2190, 2232, 3539, 3764
Eam1105I GACNNNNNGTC 1 cut(s) 3653
EarI CTCTTC 5 cut(s) 703, 2190, 2232, 3539, 3764
Eco130I CCWWGG 1 cut(s) 3796
Eco147I AGGCCT 1 cut(s) 3263
Eco24I GRGCYC 3 cut(s) 459, 467, 2244
Eco31I GGTCTC 1 cut(s) 2828
Eco32I GATATC 4 cut(s) 954, 2597, 2653, 3890
Eco47I GGWCC 4 cut(s) 214, 923, 1124, 2976
Eco47III AGCGCT 1 cut(s) 3204
Eco57I CTGAAG 2 cut(s) 1311, 1380
Eco81I CCTNAGG 2 cut(s) 2718, 4129
Eco88I CYCGRG 3 cut(s) 40, 460, 3206
Eco91I GGTNACC 1 cut(s) 2709
EcoO109I RGGNCCY 3 cut(s) 455, 456, 1124
EcoO65I GGTNACC 1 cut(s) 2709
EcoRI GAATTC 3 cut(s) 994, 1300, 3909
EcoRII CCWGG 2 cut(s) 2809, 2921
EcoRV GATATC 4 cut(s) 954, 2597, 2653, 3890
EcoT14I CCWWGG 1 cut(s) 3796
EcoT38I GRGCYC 3 cut(s) 459, 467, 2244
ErhI CCWWGG 1 cut(s) 3796
Esp3I CGTCTC 2 cut(s) 1058, 1962
FalI AAGNNNNNCTT 2 cut(s) 921, 953
FaqI GGGAC 4 cut(s) 869, 1110, 1158, 1688
FauI CCCGC 2 cut(s) 2738, 3402
FbaI TGATCA 1 cut(s) 3267
FblI GTMKAC 3 cut(s) 1014, 1470, 1703
FriOI GRGCYC 3 cut(s) 459, 467, 2244
FspBI CTAG 5 cut(s) 180, 773, 917, 1401, 1832
GlaI GCGC 6 cut(s) 38, 680, 2330, 2515, 2840, 3204
GsaI CCCAGC 1 cut(s) 3618
GsuI CTGGAG 1 cut(s) 2118
HaeII RGCGCY 1 cut(s) 3206
HgaI GACGC 2 cut(s) 43, 992
HhaI GCGC 6 cut(s) 39, 681, 2331, 2516, 2841, 3205
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 6 cut(s) 37, 679, 2329, 2514, 2839, 3203
HinP1I GCGC 6 cut(s) 37, 679, 2329, 2514, 2839, 3203
HindIII AAGCTT 3 cut(s) 831, 1422, 1798
HinfI GANTC 9 cut(s) 897, 1164, 1188, 2681, 2726, 2779, 3664, 4010, 4134
HphI GGTGA 4 cut(s) 2001, 2962, 3766, 3781
Hpy99I CGWCG 3 cut(s) 37, 1519, 1522
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 6 cut(s) 37, 679, 2329, 2514, 2839, 3203
Kpn2I TCCGGA 3 cut(s) 2439, 2591, 3884
Ksp22I TGATCA 1 cut(s) 3267
LguI GCTCTTC 1 cut(s) 2232
LmnI GCTCC 8 cut(s) 1580, 1627, 2709, 2764, 2833, 3042, 3274, 3957
MaeI CTAG 5 cut(s) 180, 773, 917, 1401, 1832
MbiI CCGCTC 1 cut(s) 1950
MfeI CAATTG 2 cut(s) 2853, 2934
MflI RGATCY 4 cut(s) 736, 1728, 3463, 3493
MhlI GDGCHC 4 cut(s) 459, 467, 1158, 2244
MlsI TGGCCA 1 cut(s) 3815
MluNI TGGCCA 1 cut(s) 3815
MlyI GAGTC 4 cut(s) 906, 1197, 2690, 2773
MmeI TCCRAC 8 cut(s) 211, 269, 901, 2045, 2782, 3153, 3700, 4075
Mox20I TGGCCA 1 cut(s) 3815
MroI TCCGGA 3 cut(s) 2439, 2591, 3884
MroXI GAANNNNTTC 1 cut(s) 1463
MscI TGGCCA 1 cut(s) 3815
MslI CAYNNNNRTG 4 cut(s) 1538, 1760, 2891, 3428
Msp20I TGGCCA 1 cut(s) 3815
MspA1I CMGCKG 1 cut(s) 767
MspR9I CCNGG 4 cut(s) 461, 462, 2811, 2923
MunI CAATTG 2 cut(s) 2853, 2934
Mva1269I GAATGC 1 cut(s) 2035
MvaI CCWGG 2 cut(s) 2811, 2923
MvnI CGCG 5 cut(s) 37, 68, 679, 2331, 2625
NciI CCSGG 2 cut(s) 461, 462
NcoI CCATGG 1 cut(s) 3796
NheI GCTAGC 2 cut(s) 1400, 1831
NlaIV GGNNCC 7 cut(s) 353, 457, 458, 1126, 1730, 2705, 3472
NmeAIII GCCGAG 2 cut(s) 1305, 3605
NmuCI GTSAC 3 cut(s) 898, 1210, 3318
NspI RCATGY 2 cut(s) 2075, 2398
NspV TTCGAA 1 cut(s) 3299
PaeR7I CTCGAG 1 cut(s) 40
PagI TCATGA 2 cut(s) 756, 2401
PceI AGGCCT 1 cut(s) 3263
PciI ACATGT 1 cut(s) 2071
PciSI GCTCTTC 1 cut(s) 2232
PcsI WCGNNNNNNNCGW 3 cut(s) 3024, 3579, 3651
PctI GAATGC 1 cut(s) 2035
PdmI GAANNNNTTC 1 cut(s) 1463
PfeI GAWTC 5 cut(s) 1164, 2726, 3664, 4010, 4134
PflMI CCANNNNNTGG 1 cut(s) 1372
PleI GAGTC 4 cut(s) 905, 1196, 2689, 2773
PpsI GAGTC 4 cut(s) 905, 1196, 2689, 2773
Ppu21I YACGTR 1 cut(s) 295
PpuMI RGGWCCY 1 cut(s) 1124
PscI ACATGT 1 cut(s) 2071
PshAI GACNNNNGTC 1 cut(s) 2981
PshBI ATTAAT 3 cut(s) 156, 1037, 3123
Psp1406I AACGTT 3 cut(s) 132, 276, 3876
Psp5II RGGWCCY 1 cut(s) 1124
Psp6I CCWGG 2 cut(s) 2809, 2921
PspEI GGTNACC 1 cut(s) 2709
PspFI CCCAGC 1 cut(s) 3614
PspGI CCWGG 2 cut(s) 2809, 2921
PspN4I GGNNCC 7 cut(s) 353, 457, 458, 1126, 1730, 2705, 3472
PspOMI GGGCCC 1 cut(s) 455
PspPI GGNCC 8 cut(s) 214, 455, 456, 674, 923, 1124, 2976, 3074
PspPPI RGGWCCY 1 cut(s) 1124
PstI CTGCAG 2 cut(s) 1053, 3190
PsuI RGATCY 4 cut(s) 736, 1728, 3463, 3493
RseI CAYNNNNRTG 4 cut(s) 1538, 1760, 2891, 3428
SapI GCTCTTC 1 cut(s) 2232
Sau96I GGNCC 8 cut(s) 214, 455, 456, 674, 923, 1124, 2976, 3074
ScaI AGTACT 1 cut(s) 936
SchI GAGTC 4 cut(s) 906, 1197, 2690, 2773
ScrFI CCNGG 4 cut(s) 461, 462, 2811, 2923
SduI GDGCHC 4 cut(s) 459, 467, 1158, 2244
SfcI CTRYAG 3 cut(s) 1049, 1246, 3186
SfiI GGCCNNNNNGGCC 1 cut(s) 3081
Sfr274I CTCGAG 1 cut(s) 40
SfuI TTCGAA 1 cut(s) 3299
SinI GGWCC 4 cut(s) 214, 923, 1124, 2976
SlaI CTCGAG 1 cut(s) 40
SmaI CCCGGG 1 cut(s) 462
SmiMI CAYNNNNRTG 4 cut(s) 1538, 1760, 2891, 3428
SmlI CTYRAG 7 cut(s) 40, 203, 209, 812, 2121, 2216, 2453
SmoI CTYRAG 7 cut(s) 40, 203, 209, 812, 2121, 2216, 2453
SpeI ACTAGT 1 cut(s) 179
SseBI AGGCCT 1 cut(s) 3263
SspI AATATT 1 cut(s) 3326
SspMI CTAG 5 cut(s) 180, 773, 917, 1401, 1832
StuI AGGCCT 1 cut(s) 3263
StyD4I CCNGG 4 cut(s) 459, 460, 2809, 2921
StyI CCWWGG 1 cut(s) 3796
TatI WGTACW 6 cut(s) 934, 2315, 3309, 3621, 3708, 3783
TauI GCSGC 4 cut(s) 577, 587, 679, 1953
TfiI GAWTC 5 cut(s) 1164, 2726, 3664, 4010, 4134
TseFI GTSAC 3 cut(s) 898, 1210, 3318
Tsp45I GTSAC 3 cut(s) 898, 1210, 3318
TspGWI ACGGA 6 cut(s) 564, 1741, 2037, 2846, 3711, 4013
TspMI CCCGGG 1 cut(s) 460
Van91I CCANNNNNTGG 1 cut(s) 1372
VpaK11BI GGWCC 4 cut(s) 214, 923, 1124, 2976
VspI ATTAAT 3 cut(s) 156, 1037, 3123
XceI RCATGY 2 cut(s) 2075, 2398
XcmI CCANNNNNNNNNTGG 5 cut(s) 413, 484, 1853, 2142, 2890
XhoI CTCGAG 1 cut(s) 40
XmaI CCCGGG 1 cut(s) 460
XmiI GTMKAC 3 cut(s) 1014, 1470, 1703
XmnI GAANNNNTTC 1 cut(s) 1463
XspI CTAG 5 cut(s) 180, 773, 917, 1401, 1832
ZraI GACGTC 1 cut(s) 6
ZrmI AGTACT 1 cut(s) 936
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.