Rmu_ssc0000397.1_g000039
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000397.1
OG0000493
Physical Location & Seq
Forward (+)
160151 .. 163146
2996 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000397.1_g000039.1.cds

Sequence Viewer

Length: 1836 bp
atgcagcaaggaatgattcttccttttcaacccctctcaattacgtttactgaaatcaaatatgcagttgacatgccacaggaaatgaaaggtcaaggcattactgaggatcgactagaactgctgaagggtgtgagtggtgctttcaggcctggggtcctaacagctctaatgggtgttagcggtgctggaaagactactttactggatgttctggcaggaaggaaaaccggtggatatattgaaggaaacattaccatttctgggtatccaaaaaagcaagaaacatttgctcgtatctcaggatattgtgagcagacagatatacactctccacatgttacagtttatgagtctttgatttattctgcatggctccgcttgtcccctgaagttgattccccaaccagaaagatgtttattgaagaagtcatggaacttgtggaactgacctcaataagggaagcacttgttggattgcctggagggaatggtctctcgactgagcagcgcaaaaggctaacaattgcagtagagcttgttgccaacccatccataatatttatggatgagcccacctctggccttgatgccagggcagcagcaattgtaatgagaacagtgaggaatacagtggataccggaagaacagtagtctgcaccatccaccagccaagcattgatatatttgatgcttttgatgagatgctccttctgaaacagggtggcgaagaaatatacgttggccctttaggctaccattcttcctacttgatcggatactttgagggaattagtggagtttctaaaatgaagaatggttacaatcctgcaacttggatgttggaggttacttctgcagctcaagaagcagctctagggattaatttcacagacatatacaagaattcagaagcatacaggagaaacaaggccttggtcaaggaactaagtattcctccaccgaatacaagagacttgtacttcccaacaaaatattcccagtctttctatacccagtgcaaagcttgcttatggaagcaacatttgtcttactggagaaacccggcatatagtgcagttagacttcttttcacaacattgatagctttagcaaccgggacattattctggggtcttggctccagaaggcaaaagcagcaagatctttttaatgcaatgggtgctatgtattctgctattctcttcattgggccacaaaatacctcaacagtgcagccagttgtaggcattgagcgaatagtcttttacagagaaagggctgccggaatgtactctgccttgccatatgcctttggacaggttgggattgagctcccatacactttgatccaaactatcatatatgtggttatatcatacacgatgatcggatttgagtggacggtcagcaagttcttttggcaactattcttcatatacttcacttacttatacttcaccttatatggcatgatgagtgtggccattactcccaacattgccgtttccgctgtagtttccacggcattcaacccgctatggaacgttttttcaggatttatcattcccaaatcaagaattccgatatggtggagatggttctactggtcgtgcccggtctcttggagcttgtacggaatgattggttcgcagtttgaaggcattgaggacaggcttgattccggggaaactgtggacgcttttaccaggacttattttgggtatagagaagactttatgagtgttgttgcaatagtgcttgtagctttttcagtgctctttggatccgtctttgccttttcaatcaaagcctttaactttcaaaagagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

611

Amino Acids

68.75

Weight (kDa)

7.56

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 183, 379, 1512, 1538
AclI AACGTT 1 cut(s) 1548
AclWI GGATC 4 cut(s) 117, 1345, 1782, 1795
AcoI YGGCCR 1 cut(s) 1485
AcsI RAATTY 2 cut(s) 907, 1581
AcuI CTGAAG 2 cut(s) 146, 411
AfaI GTAC 3 cut(s) 983, 1295, 1637
AfiI CCNNNNNNNGG 4 cut(s) 264, 459, 581, 1247
AflIII ACRYGT 1 cut(s) 337
AgeI ACCGGT 1 cut(s) 230
AgsI TTSAA 7 cut(s) 29, 245, 425, 1534, 1661, 1806, 1826
AjnI CCWGG 4 cut(s) 151, 481, 593, 1709
AjuI GAANNNNNNNTTGG 6 cut(s) 456, 488, 726, 758, 982, 1014
AluBI AGCT 9 cut(s) 167, 538, 863, 875, 1028, 1109, 1336, 1632, 1769
AluI AGCT 9 cut(s) 167, 538, 863, 875, 1028, 1109, 1336, 1632, 1769
Alw21I GWGCWC 2 cut(s) 1338, 1782
Alw26I GTCTC 3 cut(s) 500, 969, 1627
AlwI GGATC 4 cut(s) 117, 1345, 1782, 1795
AoxI GGCC 6 cut(s) 149, 583, 745, 933, 1214, 1485
ApeKI GCWGC 9 cut(s) 4, 508, 599, 602, 860, 872, 1159, 1237, 1283
ApoI RAATTY 2 cut(s) 907, 1581
AseI ATTAAT 1 cut(s) 885
AsiGI ACCGGT 1 cut(s) 230
AspLEI GCGC 1 cut(s) 513
AspS9I GGNCC 3 cut(s) 157, 746, 1214
AsuC2I CCSGG 4 cut(s) 1067, 1120, 1619, 1687
AsuHPI GGTGA 1 cut(s) 1453
AvaII GGWCC 1 cut(s) 157
BaeGI GKGCMC 1 cut(s) 1619
BalI TGGCCA 1 cut(s) 1487
BamHI GGATCC 1 cut(s) 1787
BanII GRGCYC 2 cut(s) 576, 1338
BarI GAAGNNNNNNTAC 2 cut(s) 806, 838
BbsI GAAGAC 1 cut(s) 1740
Bbv12I GWGCWC 2 cut(s) 1338, 1782
BbvI GCAGC 9 cut(s) 16, 520, 611, 614, 872, 884, 1171, 1249, 1270
BccI CCATC 3 cut(s) 559, 671, 1593
BceAI ACGGC 2 cut(s) 1490, 1542
BciT130I CCWGG 4 cut(s) 153, 483, 595, 1711
BciVI GTATCC 3 cut(s) 279, 631, 773
BcnI CCSGG 4 cut(s) 1067, 1120, 1619, 1687
BcoDI GTCTC 3 cut(s) 500, 969, 1627
BfaI CTAG 2 cut(s) 116, 878
BfmI CTRYAG 2 cut(s) 858, 1515
BfuI GTATCC 3 cut(s) 279, 631, 773
BglI GCCNNNNNGGC 1 cut(s) 753
BglII AGATCT 1 cut(s) 1165
BisI GCNGC 9 cut(s) 5, 509, 600, 603, 861, 873, 1160, 1238, 1284
BlsI GCNGC 9 cut(s) 6, 510, 601, 604, 862, 874, 1161, 1239, 1285
Bme1390I CCNGG 8 cut(s) 153, 483, 595, 1067, 1120, 1619, 1687, 1711
Bme18I GGWCC 1 cut(s) 157
BmgT120I GGNCC 3 cut(s) 157, 746, 1214
BmiI GGNNCC 4 cut(s) 158, 377, 1144, 1789
BmrFI CCNGG 8 cut(s) 153, 483, 595, 1067, 1120, 1619, 1687, 1711
BmrI ACTGGG 2 cut(s) 997, 1012
BmsI GCATC 3 cut(s) 580, 682, 696
BmuI ACTGGG 2 cut(s) 997, 1012
BpiI GAAGAC 1 cut(s) 1740
BplI GAGNNNNNCTC 2 cut(s) 563, 595
BpmI CTGGAG 3 cut(s) 504, 1078, 1129
BpuEI CTTGAG 1 cut(s) 849
BpuMI CCSGG 4 cut(s) 1067, 1120, 1619, 1687
BsaI GGTCTC 2 cut(s) 500, 1627
BsaJI CCNNGG 5 cut(s) 152, 594, 936, 1524, 1686
BsaWI WCCGGW 2 cut(s) 230, 641
Bsc4I CCNNNNNNNGG 4 cut(s) 264, 459, 581, 1247
Bse118I RCCGGY 1 cut(s) 230
Bse1I ACTGG 6 cut(s) 210, 1003, 1018, 1061, 1241, 1613
Bse3DI GCAATG 2 cut(s) 1185, 1500
BseBI CCWGG 4 cut(s) 153, 483, 595, 1711
BseDI CCNNGG 5 cut(s) 152, 594, 936, 1524, 1686
BseGI GGATG 5 cut(s) 214, 551, 574, 663, 846
BseLI CCNNNNNNNGG 4 cut(s) 264, 459, 581, 1247
BseMI GCAATG 2 cut(s) 1185, 1500
BseMII CTCAG 3 cut(s) 96, 315, 495
BseNI ACTGG 6 cut(s) 210, 1003, 1018, 1061, 1241, 1613
BseSI GKGCMC 1 cut(s) 1619
BseXI GCAGC 9 cut(s) 16, 520, 611, 614, 872, 884, 1171, 1249, 1270
BsgI GTGCAG 3 cut(s) 643, 1098, 1256
BshFI GGCC 6 cut(s) 151, 585, 747, 935, 1216, 1487
BshTI ACCGGT 1 cut(s) 230
BsiHKAI GWGCWC 2 cut(s) 1338, 1782
BsiSI CCGG 7 cut(s) 231, 642, 1067, 1119, 1287, 1619, 1686
BslFI GGGAC 2 cut(s) 370, 1135
BslI CCNNNNNNNGG 4 cut(s) 264, 459, 581, 1247
BsmAI GTCTC 3 cut(s) 500, 969, 1627
BsmFI GGGAC 2 cut(s) 370, 1135
BsmI GAATGC 1 cut(s) 1529
BsnI GGCC 6 cut(s) 151, 585, 747, 935, 1216, 1487
Bso31I GGTCTC 2 cut(s) 500, 1627
Bsp1286I GDGCHC 4 cut(s) 576, 1338, 1619, 1782
Bsp143I GATC 6 cut(s) 109, 774, 1165, 1350, 1389, 1787
BspACI CCGC 4 cut(s) 183, 379, 1512, 1538
BspANI GGCC 6 cut(s) 151, 585, 747, 935, 1216, 1487
BspCNI CTCAG 3 cut(s) 97, 314, 496
BspLI GGNNCC 4 cut(s) 158, 377, 1144, 1789
BspMAI CTGCAG 1 cut(s) 862
BspPI GGATC 4 cut(s) 117, 1345, 1782, 1795
BspTNI GGTCTC 2 cut(s) 500, 1627
BsrDI GCAATG 2 cut(s) 1185, 1500
BsrFI RCCGGY 1 cut(s) 230
BsrI ACTGG 6 cut(s) 210, 1003, 1018, 1061, 1241, 1613
BssAI RCCGGY 1 cut(s) 230
BssECI CCNNGG 5 cut(s) 152, 594, 936, 1524, 1686
BssMI GATC 6 cut(s) 109, 774, 1165, 1350, 1389, 1787
BssT1I CCWWGG 1 cut(s) 936
Bst2UI CCWGG 4 cut(s) 153, 483, 595, 1711
Bst4CI ACNGT 7 cut(s) 346, 622, 634, 652, 1234, 1408, 1696
Bst6I CTCTTC 1 cut(s) 1211
BstAPI GCANNNNNTGC 3 cut(s) 1029, 1076, 1184
BstC8I GCNNGC 1 cut(s) 1030
BstDEI CTNAG 4 cut(s) 105, 301, 504, 950
BstDSI CCRYGG 1 cut(s) 1524
BstENI CCTNNNNNAGG 1 cut(s) 457
BstF5I GGATG 5 cut(s) 214, 551, 574, 663, 846
BstHHI GCGC 1 cut(s) 513
BstKTI GATC 6 cut(s) 112, 777, 1168, 1353, 1392, 1790
BstMAI GTCTC 3 cut(s) 500, 969, 1627
BstMBI GATC 6 cut(s) 109, 774, 1165, 1350, 1389, 1787
BstMWI GCNNNNNNNGC 9 cut(s) 517, 599, 753, 869, 1029, 1076, 1159, 1184, 1511
BstNI CCWGG 4 cut(s) 153, 483, 595, 1711
BstNSI RCATGY 2 cut(s) 76, 341
BstSCI CCNGG 8 cut(s) 151, 481, 593, 1065, 1118, 1617, 1685, 1709
BstSFI CTRYAG 2 cut(s) 858, 1515
BstSLI GKGCMC 1 cut(s) 1619
BstV1I GCAGC 9 cut(s) 16, 520, 611, 614, 872, 884, 1171, 1249, 1270
BstV2I GAAGAC 1 cut(s) 1740
BstX2I RGATCY 2 cut(s) 1165, 1787
BstYI RGATCY 2 cut(s) 1165, 1787
BsuI GTATCC 3 cut(s) 279, 631, 773
BsuRI GGCC 6 cut(s) 151, 585, 747, 935, 1216, 1487
BtgI CCRYGG 1 cut(s) 1524
BtsCI GGATG 5 cut(s) 214, 551, 574, 663, 846
BtsIMutI CAGTG 5 cut(s) 627, 639, 1025, 1239, 1782
Cac8I GCNNGC 1 cut(s) 1030
CfoI GCGC 1 cut(s) 513
Cfr10I RCCGGY 1 cut(s) 230
Cfr13I GGNCC 3 cut(s) 157, 746, 1214
CseI GACGC 1 cut(s) 1709
Csp6I GTAC 3 cut(s) 982, 1294, 1636
CspAI ACCGGT 1 cut(s) 230
CviAII CATG 5 cut(s) 73, 338, 372, 433, 1474
CviQI GTAC 3 cut(s) 982, 1294, 1636
DdeI CTNAG 4 cut(s) 105, 301, 504, 950
DpnI GATC 6 cut(s) 111, 776, 1167, 1352, 1391, 1789
DpnII GATC 6 cut(s) 109, 774, 1165, 1350, 1389, 1787
EaeI YGGCCR 1 cut(s) 1485
Eam1104I CTCTTC 1 cut(s) 1211
EarI CTCTTC 1 cut(s) 1211
Ecl136II GAGCTC 1 cut(s) 1336
Eco130I CCWWGG 1 cut(s) 936
Eco147I AGGCCT 2 cut(s) 151, 935
Eco24I GRGCYC 2 cut(s) 576, 1338
Eco31I GGTCTC 2 cut(s) 500, 1627
Eco47I GGWCC 1 cut(s) 157
Eco53kI GAGCTC 1 cut(s) 1336
Eco57I CTGAAG 2 cut(s) 146, 411
EcoICRI GAGCTC 1 cut(s) 1336
EcoNI CCTNNNNNAGG 1 cut(s) 457
EcoO109I RGGNCCY 1 cut(s) 157
EcoRI GAATTC 2 cut(s) 907, 1581
EcoRII CCWGG 4 cut(s) 151, 481, 593, 1709
EcoT14I CCWWGG 1 cut(s) 936
EcoT38I GRGCYC 2 cut(s) 576, 1338
ErhI CCWWGG 1 cut(s) 936
FaeI CATG 5 cut(s) 76, 341, 375, 436, 1477
FaqI GGGAC 2 cut(s) 370, 1135
FatI CATG 5 cut(s) 72, 337, 371, 432, 1473
FauI CCCGC 1 cut(s) 1545
FauNDI CATATG 1 cut(s) 1309
Fnu4HI GCNGC 9 cut(s) 5, 509, 600, 603, 861, 873, 1160, 1238, 1284
FokI GGATG 5 cut(s) 221, 538, 581, 650, 853
FriOI GRGCYC 2 cut(s) 576, 1338
Fsp4HI GCNGC 9 cut(s) 5, 509, 600, 603, 861, 873, 1160, 1238, 1284
FspBI CTAG 2 cut(s) 116, 878
GlaI GCGC 1 cut(s) 512
GluI GCNGC 9 cut(s) 5, 509, 600, 603, 861, 873, 1160, 1238, 1284
GsuI CTGGAG 3 cut(s) 504, 1078, 1129
HaeIII GGCC 6 cut(s) 151, 585, 747, 935, 1216, 1487
HapII CCGG 7 cut(s) 231, 642, 1067, 1119, 1287, 1619, 1686
HgaI GACGC 1 cut(s) 1709
HhaI GCGC 1 cut(s) 513
Hin1II CATG 5 cut(s) 76, 341, 375, 436, 1477
Hin6I GCGC 1 cut(s) 511
HinP1I GCGC 1 cut(s) 511
HincII GTYRAC 1 cut(s) 70
HindII GTYRAC 1 cut(s) 70
HindIII AAGCTT 1 cut(s) 1026
HinfI GANTC 4 cut(s) 16, 353, 398, 1682
HpaII CCGG 7 cut(s) 231, 642, 1067, 1119, 1287, 1619, 1686
HphI GGTGA 1 cut(s) 1453
Hpy166II GTNNAC 4 cut(s) 48, 70, 1404, 1699
Hpy188I TCNGA 5 cut(s) 717, 779, 913, 1394, 1587
Hpy188III TCNNGA 6 cut(s) 303, 499, 866, 1146, 1557, 1578
Hpy8I GTNNAC 4 cut(s) 48, 70, 1404, 1699
HpyAV CCTTC 6 cut(s) 121, 216, 239, 722, 1143, 1655
HpyCH4III ACNGT 7 cut(s) 346, 622, 634, 652, 1234, 1408, 1696
HpyCH4IV ACGT 3 cut(s) 44, 741, 1548
HpyF10VI GCNNNNNNNGC 9 cut(s) 517, 599, 753, 869, 1029, 1076, 1159, 1184, 1511
HpyF3I CTNAG 4 cut(s) 105, 301, 504, 950
HpySE526I ACGT 3 cut(s) 44, 741, 1548
Hsp92II CATG 5 cut(s) 76, 341, 375, 436, 1477
HspAI GCGC 1 cut(s) 511
Kzo9I GATC 6 cut(s) 109, 774, 1165, 1350, 1389, 1787
LmnI GCTCC 5 cut(s) 381, 714, 1148, 1341, 1629
Lsp1109I GCAGC 9 cut(s) 16, 520, 611, 614, 872, 884, 1171, 1249, 1270
LweI GCATC 3 cut(s) 580, 682, 696
MaeI CTAG 2 cut(s) 116, 878
MaeII ACGT 3 cut(s) 44, 741, 1548
MaeIII GTNAC 3 cut(s) 340, 821, 850
MalI GATC 6 cut(s) 111, 776, 1167, 1352, 1391, 1789
MboI GATC 6 cut(s) 109, 774, 1165, 1350, 1389, 1787
MboII GAAGA 9 cut(s) 11, 437, 657, 743, 756, 826, 1198, 1426, 1745
MfeI CAATTG 2 cut(s) 525, 606
MflI RGATCY 2 cut(s) 1165, 1787
MhlI GDGCHC 4 cut(s) 576, 1338, 1619, 1782
MlsI TGGCCA 1 cut(s) 1487
MluCI AATT 7 cut(s) 39, 525, 606, 792, 886, 907, 1581
MluNI TGGCCA 1 cut(s) 1487
MlyI GAGTC 1 cut(s) 362
MmeI TCCRAC 2 cut(s) 454, 825
Mox20I TGGCCA 1 cut(s) 1487
MscI TGGCCA 1 cut(s) 1487
MseI TTAA 3 cut(s) 885, 1173, 1818
MslI CAYNNNNRTG 1 cut(s) 1367
Msp20I TGGCCA 1 cut(s) 1487
MspA1I CMGCKG 1 cut(s) 1514
MspI CCGG 7 cut(s) 231, 642, 1067, 1119, 1287, 1619, 1686
MspR9I CCNGG 8 cut(s) 153, 483, 595, 1067, 1120, 1619, 1687, 1711
MunI CAATTG 2 cut(s) 525, 606
Mva1269I GAATGC 1 cut(s) 1529
MvaI CCWGG 4 cut(s) 153, 483, 595, 1711
MwoI GCNNNNNNNGC 9 cut(s) 517, 599, 753, 869, 1029, 1076, 1159, 1184, 1511
NciI CCSGG 4 cut(s) 1067, 1120, 1619, 1687
NdeI CATATG 1 cut(s) 1309
NdeII GATC 6 cut(s) 109, 774, 1165, 1350, 1389, 1787
NlaIII CATG 5 cut(s) 76, 341, 375, 436, 1477
NlaIV GGNNCC 4 cut(s) 158, 377, 1144, 1789
NspI RCATGY 2 cut(s) 76, 341
PceI AGGCCT 2 cut(s) 151, 935
PciI ACATGT 1 cut(s) 337
PctI GAATGC 1 cut(s) 1529
PfeI GAWTC 3 cut(s) 16, 398, 1682
PinAI ACCGGT 1 cut(s) 230
PkrI GCNGC 9 cut(s) 6, 510, 601, 604, 862, 874, 1161, 1239, 1285
PleI GAGTC 1 cut(s) 361
PpsI GAGTC 1 cut(s) 361
PpuMI RGGWCCY 1 cut(s) 157
PscI ACATGT 1 cut(s) 337
PshBI ATTAAT 1 cut(s) 885
Psp124BI GAGCTC 1 cut(s) 1338
Psp1406I AACGTT 1 cut(s) 1548
Psp5II RGGWCCY 1 cut(s) 157
Psp6I CCWGG 4 cut(s) 151, 481, 593, 1709
PspGI CCWGG 4 cut(s) 151, 481, 593, 1709
PspN4I GGNNCC 4 cut(s) 158, 377, 1144, 1789
PspPI GGNCC 3 cut(s) 157, 746, 1214
PspPPI RGGWCCY 1 cut(s) 157
PstI CTGCAG 1 cut(s) 862
PsuI RGATCY 2 cut(s) 1165, 1787
RsaI GTAC 3 cut(s) 983, 1295, 1637
RsaNI GTAC 3 cut(s) 982, 1294, 1636
RseI CAYNNNNRTG 1 cut(s) 1367
SacI GAGCTC 1 cut(s) 1338
SaqAI TTAA 3 cut(s) 885, 1173, 1818
SatI GCNGC 9 cut(s) 5, 509, 600, 603, 861, 873, 1160, 1238, 1284
Sau3AI GATC 6 cut(s) 109, 774, 1165, 1350, 1389, 1787
Sau96I GGNCC 3 cut(s) 157, 746, 1214
SchI GAGTC 1 cut(s) 362
ScrFI CCNGG 8 cut(s) 153, 483, 595, 1067, 1120, 1619, 1687, 1711
SduI GDGCHC 4 cut(s) 576, 1338, 1619, 1782
SfaNI GCATC 3 cut(s) 580, 682, 696
SfcI CTRYAG 2 cut(s) 858, 1515
SinI GGWCC 1 cut(s) 157
SmiMI CAYNNNNRTG 1 cut(s) 1367
SmlI CTYRAG 1 cut(s) 864
SmoI CTYRAG 1 cut(s) 864
Sse9I AATT 7 cut(s) 39, 525, 606, 792, 886, 907, 1581
SseBI AGGCCT 2 cut(s) 151, 935
SsiI CCGC 4 cut(s) 183, 379, 1512, 1538
SspI AATATT 2 cut(s) 561, 998
SspMI CTAG 2 cut(s) 116, 878
SstI GAGCTC 1 cut(s) 1338
StuI AGGCCT 2 cut(s) 151, 935
StyD4I CCNGG 8 cut(s) 151, 481, 593, 1065, 1118, 1617, 1685, 1709
StyI CCWWGG 1 cut(s) 936
TaaI ACNGT 7 cut(s) 346, 622, 634, 652, 1234, 1408, 1696
TaiI ACGT 3 cut(s) 47, 744, 1551
TaqI TCGA 2 cut(s) 112, 500
TasI AATT 7 cut(s) 39, 525, 606, 792, 886, 907, 1581
TatI WGTACW 2 cut(s) 981, 1293
TfiI GAWTC 3 cut(s) 16, 398, 1682
Tru1I TTAA 3 cut(s) 885, 1173, 1818
Tru9I TTAA 3 cut(s) 885, 1173, 1818
TscAI CASTG 5 cut(s) 627, 639, 1025, 1239, 1782
TseI GCWGC 9 cut(s) 4, 508, 599, 602, 860, 872, 1159, 1237, 1283
TspDTI ATGAA 4 cut(s) 101, 827, 1198, 1426
TspGWI ACGGA 2 cut(s) 1653, 1780
TspRI CASTG 5 cut(s) 627, 639, 1025, 1239, 1782
VpaK11BI GGWCC 1 cut(s) 157
VspI ATTAAT 1 cut(s) 885
XagI CCTNNNNNAGG 1 cut(s) 457
XapI RAATTY 2 cut(s) 907, 1581
XceI RCATGY 2 cut(s) 76, 341
XcmI CCANNNNNNNNNTGG 1 cut(s) 562
XspI CTAG 2 cut(s) 116, 878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.