Rorug06G0283500
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
43177865 .. 43185214
7350 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0283500.1

Sequence Viewer

Length: 1884 bp
ATGGCGGAGGATCGCCGGAGTAGTTCCGAGAGTTCTGTAGAAGTTCCGGGGAGAATTGAGCAGGAAATTGACGGCGGAAGTGGCGGGAAAAGAATAGAGTTGGAGAACGGAGAGGCTAGTGGCGGAGGCGGAGGCGTTACTGCTCCGGTGAATAACGGCGGCGGTAGTAGCTCTACAGGAAGTTCTGGCTTTAGCTTTTCGAAAGCGAACGCATTGCCAGTGGAGATATCACCGACTCATGAAACGCCAGAACCACATTCAGTTCCAGCAAAGTTGGAGAGATCGAAAACGGAGAGCACCAGACCTAATGTATTGTCCAAAGAGGCAGCAATGATTTTTGACGACAAAACTTCAGTCCATCAGAAGTTAAAGCTGTTAAAGAGAATAGCTACTGTGAAAGATGACGGAACTGTAGAATTCGATGTTCCAGGGGATGTTGAATCTCAATCTTTTGGTGTTGGATCCACTGCTGGTTGTACCGATGTTGCTGATGAGCCTCTTGATGCAACAGAGCTCCAATGCATACCACCAATGCAAATAGTAATGCTTATTGTTGGAACGCGTGGAGATGTGCAGCCGTTTATTGCAATTGGCAAACGTTTGCAGGACTATGGCCATCGTGTAAGACTAGCTACTCATTCAAATTTTAAAGAGTTTGTCTTGACTGCTGGTTTGGAGTTCTACCCTTTAGGCGGTGATCCAAAAGTTCTTGCTGGCTATATGGTTAAAAATAAAGGCTTCTTGCCGTCAGGGCCTTCGGAGATTCCTATTCAGCGTAACCAAATAAAGGAAATTATATATTCCTTACTTCCAGCTTGCAAAGAGCCTGATGTAGATTCTGGTATCCCCTTTAAAGCGGATGCAATTATTGCAAACCCCCCAGCCTATGGGCATACTCATGTGGCGGAGGCACTGAAAATACCTCTTCACATATTTTTTACAATGCCATGGACGCCAACAAGTGAATTTCCACATCCCTTGTCCCGCGTTAAACAACAAACTGGATATAGGCTATCGTATCAAATTGTTGACTCCTTAATATGGCTTGGAATACGGGACATGATTAATGATGTTCGGAAGAAAAAATTGAAATTACGACCCGTCACATATTTAAGTGGTTCACAAGGCTCTGAGTCTGATGTCCCACATGGATACATATGGAGTCCTCATCTTGTTCCCAAACCAAAAGATTGGGGACCTAAGGTAGATGTGGTGGGATTTTGCTTCCTTGATCTTGCATCAAATTATGAACCTCCACAACCACTAGTGGAATGGCTTAAAGCTGGTGACAAGCCTATATACATTGGGTTTGGTAGCCTTCCTGTTCAAGAGCCAGAGAAAATGACCCAAATAATCGTCGATGCATTAGAAAAGACAGGACAGAGAGGCATCATTAACAAAGGCTGGGGTGGCCTGGGGAACTTGGCTGAACCAAAGGAATCCATATACTTATTGGACAACTGCCCTCATGACTGGCTGTTTCTACAATGCAAGGCAGTGGTGCATCATGGAGGTGCTGGAACAACGGCTGCTGGTCTAAAAGCTGCATGTCCAACAACAATTGTTCCTTTCTTTGGAGACCAACCCTTCTGGGGAGAGCGAGTACATGCCAGAGGAGTAGGCCCTGCACCCATTGCAGTCGATGAGTTCTCACTTCCCAAATTGGTTGGTGCTATAAATTACATGCTTGATCCCAAGGTGAAGGAGCGTGCTATTGAACTTGCCAAGGATATGGAGAATGAGGATGGTGTGACAGGAGCAGTCATGGCCTTCTTTAAGCATCTTCCTCGCAAAAAGCCAGAGTCTGAGCCAGAAACAGATTGCATGAAGAGAATTCCTTGCTGTGCCTCCAAAGAGAGAGGAGTGATCCTTGTTGATTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

627

Amino Acids

68.15

Weight (kDa)

5.95

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_28 PF03033 180 - 323 5.2e-35 Glycosyltransferase family 28 N-terminal domain
UDPGT PF00201 428 - 575 8.1e-06 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 481 - 580 3.7e-11 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 887
AccII CGCG 2 cut(s) 562, 987
AclI AACGTT 1 cut(s) 598
AclWI GGATC 6 cut(s) 18, 456, 469, 692, 1685, 1861
AcoI YGGCCR 1 cut(s) 613
AcsI RAATTY 4 cut(s) 416, 643, 965, 1833
AcuI CTGAAG 1 cut(s) 336
AcyI GRCGYC 1 cut(s) 953
AfaI GTAC 2 cut(s) 478, 1605
AfiI CCNNNNNNNGG 6 cut(s) 692, 787, 887, 1041, 1574, 1592
AflIII ACRYGT 1 cut(s) 560
AgsI TTSAA 5 cut(s) 440, 642, 1090, 1328, 1718
AhlI ACTAGT 1 cut(s) 1264
AjnI CCWGG 2 cut(s) 427, 1413
AluBI AGCT 9 cut(s) 171, 195, 373, 389, 514, 632, 815, 1283, 1544
AluI AGCT 9 cut(s) 171, 195, 373, 389, 514, 632, 815, 1283, 1544
Alw21I GWGCWC 2 cut(s) 299, 516
Alw26I GTCTC 1 cut(s) 1572
AlwI GGATC 6 cut(s) 18, 456, 469, 692, 1685, 1861
AlwNI CAGNNNCTG 1 cut(s) 1805
AoxI GGCC 5 cut(s) 613, 752, 1411, 1621, 1767
ApeKI GCWGC 4 cut(s) 326, 574, 1529, 1544
ApoI RAATTY 4 cut(s) 416, 643, 965, 1833
ArsI GACNNNNNNTTYG 4 cut(s) 339, 371, 655, 687
AseI ATTAAT 1 cut(s) 1065
AspS9I GGNCC 3 cut(s) 752, 1196, 1622
AsuC2I CCSGG 1 cut(s) 48
AsuHPI GGTGA 5 cut(s) 160, 222, 707, 1298, 1711
AsuII TTCGAA 1 cut(s) 200
AvaII GGWCC 1 cut(s) 1196
AxyI CCTNAGG 1 cut(s) 1200
BalI TGGCCA 1 cut(s) 615
BamHI GGATCC 1 cut(s) 461
BanII GRGCYC 1 cut(s) 516
Bbv12I GWGCWC 2 cut(s) 299, 516
BbvI GCAGC 4 cut(s) 338, 586, 1516, 1531
BccI CCATC 3 cut(s) 366, 624, 1739
BceAI ACGGC 5 cut(s) 88, 172, 562, 730, 1542
BcgI CGANNNNNNTGC 4 cut(s) 196, 230, 1769, 1803
BciT130I CCWGG 2 cut(s) 429, 1415
BciVI GTATCC 2 cut(s) 854, 1145
BcnI CCSGG 1 cut(s) 48
BcoDI GTCTC 1 cut(s) 1572
BcuI ACTAGT 1 cut(s) 1264
BfaI CTAG 3 cut(s) 117, 629, 1265
BfmI CTRYAG 3 cut(s) 36, 174, 411
BfuI GTATCC 2 cut(s) 854, 1145
BglI GCCNNNNNGGC 1 cut(s) 751
BisI GCNGC 5 cut(s) 160, 327, 575, 1530, 1545
BlsI GCNGC 5 cut(s) 161, 328, 576, 1531, 1546
Bme1390I CCNGG 3 cut(s) 48, 429, 1415
Bme18I GGWCC 1 cut(s) 1196
BmgT120I GGNCC 3 cut(s) 752, 1196, 1622
BmiI GGNNCC 2 cut(s) 463, 1197
BmrFI CCNGG 3 cut(s) 48, 429, 1415
BmsI GCATC 7 cut(s) 493, 850, 1247, 1351, 1398, 1513, 1789
Bpu14I TTCGAA 1 cut(s) 200
BpuMI CCSGG 1 cut(s) 48
BsaHI GRCGYC 1 cut(s) 953
BsaI GGTCTC 1 cut(s) 1572
BsaJI CCNNGG 6 cut(s) 47, 428, 947, 1414, 1695, 1725
BsaWI WCCGGW 1 cut(s) 145
BsaXI ACNNNNNCTCC 2 cut(s) 1587, 1617
Bsc4I CCNNNNNNNGG 6 cut(s) 692, 787, 887, 1041, 1574, 1592
Bse1I ACTGG 3 cut(s) 218, 1006, 1478
Bse21I CCTNAGG 1 cut(s) 1200
Bse3DI GCAATG 3 cut(s) 212, 336, 1632
BseBI CCWGG 2 cut(s) 429, 1415
BseDI CCNNGG 6 cut(s) 47, 428, 947, 1414, 1695, 1725
BseGI GGATG 4 cut(s) 439, 865, 973, 1750
BseLI CCNNNNNNNGG 6 cut(s) 692, 787, 887, 1041, 1574, 1592
BseMI GCAATG 3 cut(s) 212, 336, 1632
BseMII CTCAG 2 cut(s) 1122, 1797
BseNI ACTGG 3 cut(s) 218, 1006, 1478
BseRI GAGGAG 2 cut(s) 1629, 1875
BseXI GCAGC 4 cut(s) 338, 586, 1516, 1531
BseYI CCCAGC 2 cut(s) 880, 1404
BsgI GTGCAG 2 cut(s) 593, 1611
Bsh1236I CGCG 2 cut(s) 562, 987
BshFI GGCC 5 cut(s) 615, 754, 1413, 1623, 1769
BsiHKAI GWGCWC 2 cut(s) 299, 516
BsiSI CCGG 3 cut(s) 16, 47, 146
BslFI GGGAC 4 cut(s) 967, 1070, 1127, 1209
BslI CCNNNNNNNGG 6 cut(s) 692, 787, 887, 1041, 1574, 1592
BsmAI GTCTC 1 cut(s) 1572
BsmFI GGGAC 4 cut(s) 967, 1070, 1127, 1209
BsnI GGCC 5 cut(s) 615, 754, 1413, 1623, 1769
Bso31I GGTCTC 1 cut(s) 1572
Bsp119I TTCGAA 1 cut(s) 200
Bsp1286I GDGCHC 2 cut(s) 299, 516
Bsp143I GATC 7 cut(s) 10, 281, 461, 697, 1231, 1690, 1866
Bsp19I CCATGG 1 cut(s) 947
BspANI GGCC 5 cut(s) 615, 754, 1413, 1623, 1769
BspCNI CTCAG 2 cut(s) 1123, 1798
BspFNI CGCG 2 cut(s) 562, 987
BspHI TCATGA 2 cut(s) 238, 1468
BspLI GGNNCC 2 cut(s) 463, 1197
BspPI GGATC 6 cut(s) 18, 456, 469, 692, 1685, 1861
BspT104I TTCGAA 1 cut(s) 200
BspTNI GGTCTC 1 cut(s) 1572
BsrDI GCAATG 3 cut(s) 212, 336, 1632
BsrI ACTGG 3 cut(s) 218, 1006, 1478
BssECI CCNNGG 6 cut(s) 47, 428, 947, 1414, 1695, 1725
BssMI GATC 7 cut(s) 10, 281, 461, 697, 1231, 1690, 1866
BssNI GRCGYC 1 cut(s) 953
BssT1I CCWWGG 3 cut(s) 947, 1695, 1725
Bst2UI CCWGG 2 cut(s) 429, 1415
Bst4CI ACNGT 2 cut(s) 394, 412
Bst6I CTCTTC 2 cut(s) 930, 1823
BstACI GRCGYC 1 cut(s) 953
BstAPI GCANNNNNTGC 2 cut(s) 869, 1634
BstBI TTCGAA 1 cut(s) 200
BstC8I GCNNGC 3 cut(s) 715, 817, 1710
BstDEI CTNAG 3 cut(s) 1131, 1200, 1806
BstDSI CCRYGG 1 cut(s) 947
BstF5I GGATG 4 cut(s) 439, 865, 973, 1750
BstFNI CGCG 2 cut(s) 562, 987
BstKTI GATC 7 cut(s) 13, 284, 464, 700, 1234, 1693, 1869
BstMAI GTCTC 1 cut(s) 1572
BstMBI GATC 7 cut(s) 10, 281, 461, 697, 1231, 1690, 1866
BstMWI GCNNNNNNNGC 8 cut(s) 81, 168, 751, 869, 952, 1410, 1634, 1766
BstNI CCWGG 2 cut(s) 429, 1415
BstNSI RCATGY 3 cut(s) 1551, 1610, 1687
BstSCI CCNGG 3 cut(s) 46, 427, 1413
BstSFI CTRYAG 3 cut(s) 36, 174, 411
BstUI CGCG 2 cut(s) 562, 987
BstV1I GCAGC 4 cut(s) 338, 586, 1516, 1531
BstX2I RGATCY 1 cut(s) 461
BstXI CCANNNNNNTGG 2 cut(s) 1191, 1732
BstYI RGATCY 1 cut(s) 461
Bsu36I CCTNAGG 1 cut(s) 1200
BsuI GTATCC 2 cut(s) 854, 1145
BsuRI GGCC 5 cut(s) 615, 754, 1413, 1623, 1769
BtgI CCRYGG 1 cut(s) 947
BtsCI GGATG 4 cut(s) 439, 865, 973, 1750
BtsI GCAGTG 2 cut(s) 465, 1503
BtsIMutI CAGTG 4 cut(s) 225, 465, 911, 1503
Cac8I GCNNGC 3 cut(s) 715, 817, 1710
CaiI CAGNNNCTG 1 cut(s) 1805
CciI TCATGA 2 cut(s) 238, 1468
Cfr13I GGNCC 3 cut(s) 752, 1196, 1622
CseI GACGC 1 cut(s) 961
Csp6I GTAC 2 cut(s) 477, 1604
CspCI CAANNNNNGTGG 2 cut(s) 960, 995
CviQI GTAC 2 cut(s) 477, 1604
DdeI CTNAG 3 cut(s) 1131, 1200, 1806
DpnI GATC 7 cut(s) 12, 283, 463, 699, 1233, 1692, 1868
DpnII GATC 7 cut(s) 10, 281, 461, 697, 1231, 1690, 1866
DraI TTTAAA 2 cut(s) 649, 853
EaeI YGGCCR 1 cut(s) 613
Eam1104I CTCTTC 2 cut(s) 930, 1823
EarI CTCTTC 2 cut(s) 930, 1823
EciI GGCGGA 5 cut(s) 20, 90, 138, 144, 920
Ecl136II GAGCTC 1 cut(s) 514
Eco130I CCWWGG 3 cut(s) 947, 1695, 1725
Eco24I GRGCYC 1 cut(s) 516
Eco31I GGTCTC 1 cut(s) 1572
Eco32I GATATC 1 cut(s) 228
Eco47I GGWCC 1 cut(s) 1196
Eco53kI GAGCTC 1 cut(s) 514
Eco57I CTGAAG 1 cut(s) 336
Eco81I CCTNAGG 1 cut(s) 1200
EcoICRI GAGCTC 1 cut(s) 514
EcoO109I RGGNCCY 3 cut(s) 752, 1196, 1622
EcoRI GAATTC 2 cut(s) 416, 1833
EcoRII CCWGG 2 cut(s) 427, 1413
EcoRV GATATC 1 cut(s) 228
EcoT14I CCWWGG 3 cut(s) 947, 1695, 1725
EcoT22I ATGCAT 2 cut(s) 524, 1366
EcoT38I GRGCYC 1 cut(s) 516
ErhI CCWWGG 3 cut(s) 947, 1695, 1725
FaqI GGGAC 4 cut(s) 967, 1070, 1127, 1209
FauI CCCGC 2 cut(s) 77, 992
FauNDI CATATG 1 cut(s) 1157
Fnu4HI GCNGC 5 cut(s) 160, 327, 575, 1530, 1545
FokI GGATG 4 cut(s) 446, 872, 960, 1757
FriOI GRGCYC 1 cut(s) 516
Fsp4HI GCNGC 5 cut(s) 160, 327, 575, 1530, 1545
FspBI CTAG 3 cut(s) 117, 629, 1265
GluI GCNGC 5 cut(s) 160, 327, 575, 1530, 1545
GsaI CCCAGC 2 cut(s) 884, 1408
HaeIII GGCC 5 cut(s) 615, 754, 1413, 1623, 1769
HapII CCGG 3 cut(s) 16, 47, 146
HgaI GACGC 1 cut(s) 961
Hin1I GRCGYC 1 cut(s) 953
HincII GTYRAC 1 cut(s) 1030
HindII GTYRAC 1 cut(s) 1030
HinfI GANTC 9 cut(s) 235, 440, 763, 836, 1031, 1133, 1162, 1439, 1802
HpaII CCGG 3 cut(s) 16, 47, 146
HphI GGTGA 5 cut(s) 160, 222, 707, 1298, 1711
Hpy166II GTNNAC 2 cut(s) 1030, 1121
Hpy188I TCNGA 7 cut(s) 28, 363, 760, 1077, 1132, 1138, 1807
Hpy188III TCNNGA 5 cut(s) 239, 500, 661, 1328, 1469
Hpy8I GTNNAC 2 cut(s) 1030, 1121
Hpy99I CGWCG 1 cut(s) 1361
HpyAV CCTTC 5 cut(s) 765, 1328, 1597, 1696, 1780
HpyCH4III ACNGT 2 cut(s) 394, 412
HpyCH4IV ACGT 1 cut(s) 598
HpyF10VI GCNNNNNNNGC 8 cut(s) 81, 168, 751, 869, 952, 1410, 1634, 1766
HpyF3I CTNAG 3 cut(s) 1131, 1200, 1806
HpySE526I ACGT 1 cut(s) 598
Hsp92I GRCGYC 1 cut(s) 953
Kzo9I GATC 7 cut(s) 10, 281, 461, 697, 1231, 1690, 1866
LmnI GCTCC 4 cut(s) 148, 519, 1705, 1757
Lsp1109I GCAGC 4 cut(s) 338, 586, 1516, 1531
LweI GCATC 7 cut(s) 493, 850, 1247, 1351, 1398, 1513, 1789
MaeI CTAG 3 cut(s) 117, 629, 1265
MaeII ACGT 1 cut(s) 598
MaeIII GTNAC 5 cut(s) 136, 776, 1102, 1286, 1750
MalI GATC 7 cut(s) 12, 283, 463, 699, 1233, 1692, 1868
MboI GATC 7 cut(s) 10, 281, 461, 697, 1231, 1690, 1866
MboII GAAGA 4 cut(s) 917, 1090, 1775, 1840
MfeI CAATTG 2 cut(s) 588, 1560
MflI RGATCY 1 cut(s) 461
MhlI GDGCHC 2 cut(s) 299, 516
MlsI TGGCCA 1 cut(s) 615
MluI ACGCGT 1 cut(s) 560
MluNI TGGCCA 1 cut(s) 615
MlyI GAGTC 5 cut(s) 229, 1025, 1142, 1171, 1811
MmeI TCCRAC 5 cut(s) 81, 255, 439, 535, 1577
Mox20I TGGCCA 1 cut(s) 615
Mph1103I ATGCAT 2 cut(s) 524, 1366
MscI TGGCCA 1 cut(s) 615
MslI CAYNNNNRTG 2 cut(s) 897, 1512
Msp20I TGGCCA 1 cut(s) 615
MspI CCGG 3 cut(s) 16, 47, 146
MspR9I CCNGG 3 cut(s) 48, 429, 1415
MunI CAATTG 2 cut(s) 588, 1560
MvaI CCWGG 2 cut(s) 429, 1415
MvnI CGCG 2 cut(s) 562, 987
MwoI GCNNNNNNNGC 8 cut(s) 81, 168, 751, 869, 952, 1410, 1634, 1766
NciI CCSGG 1 cut(s) 48
NcoI CCATGG 1 cut(s) 947
NdeI CATATG 1 cut(s) 1157
NdeII GATC 7 cut(s) 10, 281, 461, 697, 1231, 1690, 1866
NlaIV GGNNCC 2 cut(s) 463, 1197
NmuCI GTSAC 3 cut(s) 1102, 1286, 1750
NsiI ATGCAT 2 cut(s) 524, 1366
NspI RCATGY 3 cut(s) 1551, 1610, 1687
NspV TTCGAA 1 cut(s) 200
PagI TCATGA 2 cut(s) 238, 1468
PfeI GAWTC 4 cut(s) 440, 763, 836, 1439
PflMI CCANNNNNTGG 1 cut(s) 887
PkrI GCNGC 5 cut(s) 161, 328, 576, 1531, 1546
PleI GAGTC 5 cut(s) 229, 1025, 1141, 1170, 1810
PpsI GAGTC 5 cut(s) 229, 1025, 1141, 1170, 1810
PpuMI RGGWCCY 1 cut(s) 1196
PshBI ATTAAT 1 cut(s) 1065
Psp124BI GAGCTC 1 cut(s) 516
Psp1406I AACGTT 1 cut(s) 598
Psp5II RGGWCCY 1 cut(s) 1196
Psp6I CCWGG 2 cut(s) 427, 1413
PspFI CCCAGC 2 cut(s) 880, 1404
PspGI CCWGG 2 cut(s) 427, 1413
PspN4I GGNNCC 2 cut(s) 463, 1197
PspPI GGNCC 3 cut(s) 752, 1196, 1622
PspPPI RGGWCCY 1 cut(s) 1196
PstNI CAGNNNCTG 1 cut(s) 1805
PsuI RGATCY 1 cut(s) 461
RsaI GTAC 2 cut(s) 478, 1605
RsaNI GTAC 2 cut(s) 477, 1604
RseI CAYNNNNRTG 2 cut(s) 897, 1512
SacI GAGCTC 1 cut(s) 516
SatI GCNGC 5 cut(s) 160, 327, 575, 1530, 1545
Sau3AI GATC 7 cut(s) 10, 281, 461, 697, 1231, 1690, 1866
Sau96I GGNCC 3 cut(s) 752, 1196, 1622
SchI GAGTC 5 cut(s) 229, 1025, 1142, 1171, 1811
ScrFI CCNGG 3 cut(s) 48, 429, 1415
SduI GDGCHC 2 cut(s) 299, 516
SfaNI GCATC 7 cut(s) 493, 850, 1247, 1351, 1398, 1513, 1789
SfcI CTRYAG 3 cut(s) 36, 174, 411
SfuI TTCGAA 1 cut(s) 200
SinI GGWCC 1 cut(s) 1196
SmiMI CAYNNNNRTG 2 cut(s) 897, 1512
SpeI ACTAGT 1 cut(s) 1264
SspMI CTAG 3 cut(s) 117, 629, 1265
SstI GAGCTC 1 cut(s) 516
StyD4I CCNGG 3 cut(s) 46, 427, 1413
StyI CCWWGG 3 cut(s) 947, 1695, 1725
TaaI ACNGT 2 cut(s) 394, 412
TaiI ACGT 1 cut(s) 601
TaqI TCGA 5 cut(s) 200, 284, 420, 1359, 1641
TatI WGTACW 1 cut(s) 1603
TauI GCSGC 1 cut(s) 162
TfiI GAWTC 4 cut(s) 440, 763, 836, 1439
TscAI CASTG 4 cut(s) 225, 472, 918, 1503
TseFI GTSAC 3 cut(s) 1102, 1286, 1750
TseI GCWGC 4 cut(s) 326, 574, 1529, 1544
Tsp45I GTSAC 3 cut(s) 1102, 1286, 1750
TspDTI ATGAA 3 cut(s) 255, 1263, 1841
TspGWI ACGGA 3 cut(s) 123, 305, 420
TspRI CASTG 4 cut(s) 225, 472, 918, 1503
Van91I CCANNNNNTGG 1 cut(s) 887
VpaK11BI GGWCC 1 cut(s) 1196
VspI ATTAAT 1 cut(s) 1065
XapI RAATTY 4 cut(s) 416, 643, 965, 1833
XceI RCATGY 3 cut(s) 1551, 1610, 1687
XcmI CCANNNNNNNNNTGG 2 cut(s) 1269, 1450
XspI CTAG 3 cut(s) 117, 629, 1265
Zsp2I ATGCAT 2 cut(s) 524, 1366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.