Rh6BG403300
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
62988868 .. 63022497
33630 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG403300.1

Sequence Viewer

Length: 2877 bp
ATGTGTCGAAGCAGAAGCAGTAGGGCATTACCTACAATGCTCAACTTCTCCATTAACATCTTAGAGGGGTTGTTGAATTACCTTCATGTTCTTCTGAGTAGAAAGAAGCGATTGCCAATCCTCCACGGTGTTAGTGGAATTATCAAGCCAAGAAGAATGACACTGCTTTTAGGCCCTCCAAGCTCTGGAAAGACCACATTACTACTGGCTTTGGCTGGAAAACTCGGTAAAGATCTGAAAGGAAAGATTTATACTCTATCTAAATATCAGTCTAATCTTTCGGGGAGAGTTACATACAATGGAGAGGGGACGGAAGAGTTTGTACCAGAGAGGACATCAGCATATATTAGTCAACATGATCTTCACATACCAGAGATGACAGTGAGAGAAACTCTGGCTTTTTCAGCAAGATGTCAAGGAGTCGGACCATGTTATGAAATGTTGGTAGAATTATCAAGGAGAGAAAAGACTGCAAATATAATGCCAGATCCTGATCTTGATGTTTACATGAAGGCAGCTGCACTAGAAGGACAGGAAACCAATGTAATTACAGATTATATACTCAAGGTTTTGGGGCTTGAAGTTTGTGCTGACACTATAGTAGGGGATCAAATGAGACGAGGTATCTCTGGGGGGCAAAGAAAGCGACTCACCACAGGGGAGATGCTGGTTGGACCAGCAAGAGCACTTTTTATGGATGAGATATCCACTGGCTTGGACAGTTCAACAACATTTCAGATAGTGAAGTCACTTAGACAATCCATCCACATTCTCAATGGAACTGCTGTCATCTCTCTCCTGCAGCCAGCGCCAGAAACTTATGATCTTTTCGATGATATAATTCTACTCTCAGATGGGCACATTGTGTATCAAGGTCCCCGGGACAATGTGCTTGAGTTCTTTGAGTACATGGGCTTTAAATGTCCAGAGAGAAAAGGAGTTGCTGATTTTCTACAAGAAATGATTCTATTGTCTTGTGTAACAATAACATTATTCCTACGAACTGAGATGCACCGAGATACTGTTGAAGATGGTGGGATATATATGGGAGCATTGTTTTACTCAATGATGATAATTATGTTCAATGGGTTCTCAGAGCTTGCTATGACTGTCATGAAGCTTCCTGTGTTTTTCAAGCAAAGGGACCTTCTCTTCTATCCTGCTTGGGCGTACTCTTTGCCCACATGGCTGATAAGGATCCCTATGACTTTTGTGGAAGTTTCCATTTGGGTGACCATTACGTACTACACTATAGGTTTTGATCCAAACATTGAAAGGTTCTTCAAACAGTTCCTTTCACTGCTGTTTATTAGCCAAATGGCAACTGGACTGTTCCGACTGATAGGGGCATTAGGAAGAAACATGATTGTTGCAAACACATTTGGATCGGTTGCTTTGCTTGTGCTGTTTGTTCTTGGTGGATTCCTTTTATCACTAGAGGATATGAAAAGCTGGTTGGTGTGGGGATATTATCTGTCACCAATGTCGTATGGACTGAATGCCCTGGCTGTCAATGAATTTCTTGGAAAAAGTTGGAGACATGTTTCTACCAACTCAAAAGAACCATTAGGAATAATGGTCTTGAATTCTCGAGGGGTGTTCCCAGAAGCACGTTGTATCTTGAACGCAGTACTTTCCAAAGAGGCCTTGGCAAAGAAACAAGCCACTGAAACTGGAGAGGCCATTGAATTATTGTCAACAGGAAAGAGCTATATTGGTGCAGCTAATGAAAGACTAGACACGTACAATGTGTCAGTCAATCTTACTGGCCAGCGAGGAATGGTTCTTCCTTTTGAACCCCTCACAATTACATTTGATGAAATCAGATATGCAGTTGACATGCCACAGGATATGAAAGCTCAAGGCATAACAGAGAATCGGTTAAAACTTCTGAAGGGAAGGAAAACTGGTGGACATATTGAAGGAAACATTACAATTTATGGCTATCCAAAGAAGCAAGAAACATTTGCTCGTATATCTGGATATTGTGAGCAAACGGATATACACTCTCCACATGTTACAGTCTATGAATCTTTGGTTTATTCTGCTTGGCTCCGGTTGCCCCCTGAGGTTGATTCCCCCACCAGAAAGATGTTTATTGAGGAAGTCATGGAACTTGTGGAACTGACCCCAATAAGAGATGCACTTGTTGGATTGCCTGGAGTGAATGAGCTCTCAACTGAGCAGCGCAAAAGACTAACAATGGCAGTAGAGCTTGTTGCCAACCCATCCATAATATTTATGGATGAGCCAACCTCTGGTCTTGATGCCAGGGCTGCAGCAATTGTAATGAGAACTCCAAGCATTGATATATTTGATGCTTTTGATGAGATGCTACTTTTGAAATGGGGAGGAGAAGAAATATATGTTGGTCCTTTAGGCCACCAGTCCTCTCAGTTGATCGAATACTTTGAGGGGATCAGTGGAGTTCCTAAAATGAATGATGGTTACAATCCTGCAACTTGGATGTTAGAGGTTACTTCTGCAGCACAAGAATCAACTCTTGGGGTCAATTTCACCGACATATACAAGAACTCAGAAATGTACAGGAGAAACAAGGAATTGATCAAGGAACTAAGTACTCCACCAGAAAATTCAGTAGAATTGCACTTCACAACACATGCAGCGAGACTTATTTACACAACTATGATGGCTATAGTATTTGGGATATTATTCTGGGGTCTTGGCTTCAAAAGGCAAAAGCAACAAGATCTTTTCAATGTATTAGGCTCTATGTATTCTGCCATACTCTTCATTGGGATACAAAATGCCTCATCAGTGCAGCCAGTTATAGCGATTGAGAGGGTAGTCTTTTACAGAGAAAGGGCAGCTGGAATGTACTCTGCTTTTCCATATGCATTTGGACAGATAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

958

Amino Acids

107.42

Weight (kDa)

6.07

Isoelectric Point (pI)

43.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 41 - 234 3.1e-13 ABC transporter
ABC2_membrane PF01061 320 - 507 5.1e-42 ABC-2 type transporter
ABC_tran PF00005 634 - 753 1.5e-08 ABC transporter
ABC2_membrane PF01061 872 - 957 7.3e-17 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 185, 2258
AclWI GGATC 7 cut(s) 482, 615, 1192, 1205, 1256, 1393, 2426
AcoI YGGCCR 1 cut(s) 1768
AcsI RAATTY 3 cut(s) 1517, 1585, 2593
AcuI CTGAAG 1 cut(s) 1913
AdeI CACNNNGTG 1 cut(s) 865
AfaI GTAC 9 cut(s) 324, 908, 1172, 1244, 1632, 1745, 2546, 2581, 2840
AfiI CCNNNNNNNGG 2 cut(s) 185, 2258
AflIII ACRYGT 3 cut(s) 1540, 1740, 2014
AjnI CCWGG 3 cut(s) 1503, 2158, 2270
AjuI GAANNNNNNNTTGG 6 cut(s) 1439, 1471, 2352, 2384, 2487, 2519
Alw21I GWGCWC 2 cut(s) 688, 2175
Alw26I GTCTC 3 cut(s) 610, 1531, 2623
AlwI GGATC 7 cut(s) 482, 615, 1192, 1205, 1256, 1393, 2426
AlwNI CAGNNNCTG 1 cut(s) 491
Ama87I CYCGRG 2 cut(s) 879, 1590
AoxI GGCC 5 cut(s) 172, 1644, 1680, 1768, 2380
ApoI RAATTY 3 cut(s) 1517, 1585, 2593
Asp700I GAANNNNTTC 1 cut(s) 963
AspLEI GCGC 2 cut(s) 811, 2190
AspS9I GGNCC 6 cut(s) 173, 425, 674, 875, 1144, 2372
AsuC2I CCSGG 2 cut(s) 880, 881
AsuHPI GGTGA 4 cut(s) 643, 1243, 1470, 2509
AvaI CYCGRG 2 cut(s) 879, 1590
AvaII GGWCC 5 cut(s) 425, 674, 875, 1144, 2372
AxyI CCTNAGG 1 cut(s) 2067
BaeGI GKGCMC 1 cut(s) 861
BalI TGGCCA 1 cut(s) 1770
BamHI GGATCC 1 cut(s) 1197
BanII GRGCYC 1 cut(s) 2175
BarI GAAGNNNNNNTAC 2 cut(s) 306, 338
Bbv12I GWGCWC 2 cut(s) 688, 2175
BccI CCATC 6 cut(s) 770, 848, 1025, 2236, 2438, 2644
BciT130I CCWGG 3 cut(s) 1505, 2160, 2272
BciVI GTATCC 1 cut(s) 2754
BclI TGATCA 1 cut(s) 2565
BcnI CCSGG 2 cut(s) 880, 881
BcoDI GTCTC 3 cut(s) 610, 1531, 2623
BfaI CTAG 3 cut(s) 524, 1436, 1736
BfmI CTRYAG 6 cut(s) 597, 800, 1251, 2277, 2484, 2655
BfoI RGCGCY 1 cut(s) 812
BfuI GTATCC 1 cut(s) 2754
BglI GCCNNNNNGGC 1 cut(s) 1186
BglII AGATCT 2 cut(s) 232, 2710
BmcAI AGTACT 2 cut(s) 1632, 2581
Bme1390I CCNGG 5 cut(s) 880, 881, 1505, 2160, 2272
Bme18I GGWCC 5 cut(s) 425, 674, 875, 1144, 2372
BmeT110I CYCGRG 2 cut(s) 879, 1590
BmgT120I GGNCC 6 cut(s) 173, 425, 674, 875, 1144, 2372
BmiI GGNNCC 4 cut(s) 877, 1145, 1199, 2054
BmrFI CCNGG 5 cut(s) 880, 881, 1505, 2160, 2272
BmsI GCATC 6 cut(s) 654, 999, 2131, 2257, 2308, 2322
BplI GAGNNNNNCTC 4 cut(s) 376, 408, 2240, 2272
BpmI CTGGAG 2 cut(s) 1695, 2181
BpuEI CTTGAG 3 cut(s) 548, 914, 1845
BpuMI CCSGG 2 cut(s) 880, 881
BsaAI YACGTR 2 cut(s) 1242, 1743
BsaBI GATNNNNATC 2 cut(s) 492, 1196
BsaJI CCNNGG 6 cut(s) 124, 878, 879, 1503, 1647, 2271
BsaWI WCCGGW 1 cut(s) 2055
Bsc4I CCNNNNNNNGG 2 cut(s) 185, 2258
Bse1I ACTGG 8 cut(s) 210, 715, 1330, 1678, 1771, 1912, 2386, 2786
Bse21I CCTNAGG 1 cut(s) 2067
Bse8I GATNNNNATC 2 cut(s) 492, 1196
BseBI CCWGG 3 cut(s) 1505, 2160, 2272
BseDI CCNNGG 6 cut(s) 124, 878, 879, 1503, 1647, 2271
BseGI GGATG 5 cut(s) 703, 762, 2228, 2251, 2472
BseJI GATNNNNATC 2 cut(s) 492, 1196
BseLI CCNNNNNNNGG 2 cut(s) 185, 2258
BseMII CTCAG 8 cut(s) 86, 864, 996, 1107, 2058, 2172, 2408, 2550
BseNI ACTGG 8 cut(s) 210, 715, 1330, 1678, 1771, 1912, 2386, 2786
BseRI GAGGAG 1 cut(s) 2367
BseSI GKGCMC 1 cut(s) 861
BsgI GTGCAG 3 cut(s) 504, 1740, 2801
BshFI GGCC 5 cut(s) 174, 1646, 1682, 1770, 2382
BsiHKAI GWGCWC 2 cut(s) 688, 2175
BsiHKCI CYCGRG 2 cut(s) 879, 1590
BsiSI CCGG 2 cut(s) 880, 2056
BslFI GGGAC 4 cut(s) 322, 861, 896, 1157
BslI CCNNNNNNNGG 2 cut(s) 185, 2258
BsmAI GTCTC 3 cut(s) 610, 1531, 2623
BsmBI CGTCTC 1 cut(s) 610
BsmFI GGGAC 4 cut(s) 322, 861, 896, 1157
BsmI GAATGC 1 cut(s) 1504
BsnI GGCC 5 cut(s) 174, 1646, 1682, 1770, 2382
BsoBI CYCGRG 2 cut(s) 879, 1590
Bsp1286I GDGCHC 3 cut(s) 688, 861, 2175
Bsp1407I TGTACA 1 cut(s) 2544
BspANI GGCC 5 cut(s) 174, 1646, 1682, 1770, 2382
BspCNI CTCAG 8 cut(s) 87, 863, 997, 1106, 2059, 2173, 2407, 2549
BspHI TCATGA 1 cut(s) 1113
BspLI GGNNCC 4 cut(s) 877, 1145, 1199, 2054
BspMAI CTGCAG 3 cut(s) 804, 2281, 2488
BspPI GGATC 7 cut(s) 482, 615, 1192, 1205, 1256, 1393, 2426
BsrGI TGTACA 1 cut(s) 2544
BsrI ACTGG 8 cut(s) 210, 715, 1330, 1678, 1771, 1912, 2386, 2786
BssECI CCNNGG 6 cut(s) 124, 878, 879, 1503, 1647, 2271
BssT1I CCWWGG 1 cut(s) 1647
Bst2UI CCWGG 3 cut(s) 1505, 2160, 2272
Bst4CI ACNGT 8 cut(s) 128, 382, 722, 1024, 1111, 1290, 1332, 2023
Bst6I CTCTTC 3 cut(s) 309, 1157, 2756
BstAUI TGTACA 1 cut(s) 2544
BstBAI YACGTR 2 cut(s) 1242, 1743
BstC8I GCNNGC 3 cut(s) 807, 1101, 1772
BstDSI CCRYGG 1 cut(s) 124
BstEII GGTNACC 1 cut(s) 1231
BstF5I GGATG 5 cut(s) 703, 762, 2228, 2251, 2472
BstH2I RGCGCY 1 cut(s) 812
BstHHI GCGC 2 cut(s) 811, 2190
BstMAI GTCTC 3 cut(s) 610, 1531, 2623
BstMWI GCNNNNNNNGC 7 cut(s) 180, 404, 643, 808, 1186, 2059, 2276
BstNI CCWGG 3 cut(s) 1505, 2160, 2272
BstNSI RCATGY 4 cut(s) 1544, 1843, 2018, 2624
BstPI GGTNACC 1 cut(s) 1231
BstSCI CCNGG 5 cut(s) 878, 879, 1503, 2158, 2270
BstSFI CTRYAG 6 cut(s) 597, 800, 1251, 2277, 2484, 2655
BstSLI GKGCMC 1 cut(s) 861
BstSNI TACGTA 1 cut(s) 1242
BstX2I RGATCY 4 cut(s) 232, 487, 1197, 2710
BstXI CCANNNNNNTGG 1 cut(s) 715
BstYI RGATCY 4 cut(s) 232, 487, 1197, 2710
Bsu36I CCTNAGG 1 cut(s) 2067
BsuI GTATCC 1 cut(s) 2754
BsuRI GGCC 5 cut(s) 174, 1646, 1682, 1770, 2382
BtgI CCRYGG 1 cut(s) 124
BtsCI GGATG 5 cut(s) 703, 762, 2228, 2251, 2472
BtsI GCAGTG 2 cut(s) 161, 1298
BtsIMutI CAGTG 7 cut(s) 161, 387, 708, 1298, 1665, 2428, 2784
Cac8I GCNNGC 3 cut(s) 807, 1101, 1772
CaiI CAGNNNCTG 1 cut(s) 491
CciI TCATGA 1 cut(s) 1113
CfoI GCGC 2 cut(s) 811, 2190
Cfr13I GGNCC 6 cut(s) 173, 425, 674, 875, 1144, 2372
Cfr9I CCCGGG 1 cut(s) 879
Csp6I GTAC 9 cut(s) 323, 907, 1171, 1243, 1631, 1744, 2545, 2580, 2839
CviQI GTAC 9 cut(s) 323, 907, 1171, 1243, 1631, 1744, 2545, 2580, 2839
DraI TTTAAA 1 cut(s) 919
DraIII CACNNNGTG 1 cut(s) 865
EaeI YGGCCR 1 cut(s) 1768
Eam1104I CTCTTC 3 cut(s) 309, 1157, 2756
EarI CTCTTC 3 cut(s) 309, 1157, 2756
Ecl136II GAGCTC 1 cut(s) 2173
Eco105I TACGTA 1 cut(s) 1242
Eco130I CCWWGG 1 cut(s) 1647
Eco147I AGGCCT 1 cut(s) 1646
Eco24I GRGCYC 1 cut(s) 2175
Eco32I GATATC 1 cut(s) 705
Eco47I GGWCC 5 cut(s) 425, 674, 875, 1144, 2372
Eco53kI GAGCTC 1 cut(s) 2173
Eco57I CTGAAG 1 cut(s) 1913
Eco81I CCTNAGG 1 cut(s) 2067
Eco88I CYCGRG 2 cut(s) 879, 1590
Eco91I GGTNACC 1 cut(s) 1231
EcoICRI GAGCTC 1 cut(s) 2173
EcoO109I RGGNCCY 3 cut(s) 173, 875, 1144
EcoO65I GGTNACC 1 cut(s) 1231
EcoRI GAATTC 1 cut(s) 1585
EcoRII CCWGG 3 cut(s) 1503, 2158, 2270
EcoRV GATATC 1 cut(s) 705
EcoT14I CCWWGG 1 cut(s) 1647
EcoT22I ATGCAT 1 cut(s) 2860
EcoT38I GRGCYC 1 cut(s) 2175
ErhI CCWWGG 1 cut(s) 1647
Esp3I CGTCTC 1 cut(s) 610
FaqI GGGAC 4 cut(s) 322, 861, 896, 1157
FauNDI CATATG 1 cut(s) 2854
FbaI TGATCA 1 cut(s) 2565
FokI GGATG 5 cut(s) 710, 749, 2215, 2258, 2479
FriOI GRGCYC 1 cut(s) 2175
FspBI CTAG 3 cut(s) 524, 1436, 1736
GlaI GCGC 2 cut(s) 810, 2189
GsuI CTGGAG 2 cut(s) 1695, 2181
HaeII RGCGCY 1 cut(s) 812
HaeIII GGCC 5 cut(s) 174, 1646, 1682, 1770, 2382
HapII CCGG 2 cut(s) 880, 2056
HhaI GCGC 2 cut(s) 811, 2190
Hin6I GCGC 2 cut(s) 809, 2188
HinP1I GCGC 2 cut(s) 809, 2188
HincII GTYRAC 3 cut(s) 353, 1698, 1837
HindII GTYRAC 3 cut(s) 353, 1698, 1837
HindIII AAGCTT 1 cut(s) 1118
HinfI GANTC 8 cut(s) 420, 648, 964, 1422, 1876, 2030, 2075, 2495
HpaII CCGG 2 cut(s) 880, 2056
HphI GGTGA 4 cut(s) 643, 1243, 1470, 2509
Hpy166II GTNNAC 5 cut(s) 353, 505, 1698, 1837, 1913
Hpy8I GTNNAC 5 cut(s) 353, 505, 1698, 1837, 1913
HpyAV CCTTC 7 cut(s) 92, 505, 521, 1157, 1888, 1893, 1916
HpyCH4III ACNGT 8 cut(s) 128, 382, 722, 1024, 1111, 1290, 1332, 2023
HpyCH4IV ACGT 3 cut(s) 1241, 1612, 1742
HpyF10VI GCNNNNNNNGC 7 cut(s) 180, 404, 643, 808, 1186, 2059, 2276
HpySE526I ACGT 3 cut(s) 1241, 1612, 1742
HspAI GCGC 2 cut(s) 809, 2188
Ksp22I TGATCA 1 cut(s) 2565
LmnI GCTCC 2 cut(s) 1049, 2058
LweI GCATC 6 cut(s) 654, 999, 2131, 2257, 2308, 2322
MaeI CTAG 3 cut(s) 524, 1436, 1736
MaeII ACGT 3 cut(s) 1241, 1612, 1742
MaeIII GTNAC 8 cut(s) 289, 747, 979, 1231, 1476, 2017, 2447, 2476
MfeI CAATTG 1 cut(s) 2283
MflI RGATCY 4 cut(s) 232, 487, 1197, 2710
MhlI GDGCHC 3 cut(s) 688, 861, 2175
MlsI TGGCCA 1 cut(s) 1770
MluNI TGGCCA 1 cut(s) 1770
MlyI GAGTC 2 cut(s) 429, 642
MmeI TCCRAC 5 cut(s) 403, 652, 1360, 1514, 2131
Mox20I TGGCCA 1 cut(s) 1770
Mph1103I ATGCAT 1 cut(s) 2860
MroXI GAANNNNTTC 1 cut(s) 963
MscI TGGCCA 1 cut(s) 1770
MseI TTAA 3 cut(s) 54, 918, 1883
MslI CAYNNNNRTG 2 cut(s) 1229, 2645
Msp20I TGGCCA 1 cut(s) 1770
MspA1I CMGCKG 2 cut(s) 518, 2831
MspI CCGG 2 cut(s) 880, 2056
MspR9I CCNGG 5 cut(s) 880, 881, 1505, 2160, 2272
MunI CAATTG 1 cut(s) 2283
Mva1269I GAATGC 1 cut(s) 1504
MvaI CCWGG 3 cut(s) 1505, 2160, 2272
MwoI GCNNNNNNNGC 7 cut(s) 180, 404, 643, 808, 1186, 2059, 2276
NciI CCSGG 2 cut(s) 880, 881
NdeI CATATG 1 cut(s) 2854
NlaIV GGNNCC 4 cut(s) 877, 1145, 1199, 2054
NmuCI GTSAC 3 cut(s) 747, 1231, 1476
NsiI ATGCAT 1 cut(s) 2860
NspI RCATGY 4 cut(s) 1544, 1843, 2018, 2624
PaeR7I CTCGAG 1 cut(s) 1590
PagI TCATGA 1 cut(s) 1113
PceI AGGCCT 1 cut(s) 1646
PciI ACATGT 2 cut(s) 1540, 2014
PctI GAATGC 1 cut(s) 1504
PdmI GAANNNNTTC 1 cut(s) 963
PfeI GAWTC 6 cut(s) 964, 1422, 1876, 2030, 2075, 2495
PflMI CCANNNNNTGG 2 cut(s) 185, 2258
PleI GAGTC 2 cut(s) 428, 642
PpsI GAGTC 2 cut(s) 428, 642
Ppu21I YACGTR 2 cut(s) 1242, 1743
PpuMI RGGWCCY 2 cut(s) 875, 1144
PscI ACATGT 2 cut(s) 1540, 2014
Psp124BI GAGCTC 1 cut(s) 2175
Psp5II RGGWCCY 2 cut(s) 875, 1144
Psp6I CCWGG 3 cut(s) 1503, 2158, 2270
PspEI GGTNACC 1 cut(s) 1231
PspGI CCWGG 3 cut(s) 1503, 2158, 2270
PspN4I GGNNCC 4 cut(s) 877, 1145, 1199, 2054
PspPI GGNCC 6 cut(s) 173, 425, 674, 875, 1144, 2372
PspPPI RGGWCCY 2 cut(s) 875, 1144
PstI CTGCAG 3 cut(s) 804, 2281, 2488
PstNI CAGNNNCTG 1 cut(s) 491
PsuI RGATCY 4 cut(s) 232, 487, 1197, 2710
PvuII CAGCTG 2 cut(s) 518, 2831
RsaI GTAC 9 cut(s) 324, 908, 1172, 1244, 1632, 1745, 2546, 2581, 2840
RsaNI GTAC 9 cut(s) 323, 907, 1171, 1243, 1631, 1744, 2545, 2580, 2839
RseI CAYNNNNRTG 2 cut(s) 1229, 2645
SacI GAGCTC 1 cut(s) 2175
SaqAI TTAA 3 cut(s) 54, 918, 1883
Sau96I GGNCC 6 cut(s) 173, 425, 674, 875, 1144, 2372
ScaI AGTACT 2 cut(s) 1632, 2581
SchI GAGTC 2 cut(s) 429, 642
ScrFI CCNGG 5 cut(s) 880, 881, 1505, 2160, 2272
SduI GDGCHC 3 cut(s) 688, 861, 2175
SfaNI GCATC 6 cut(s) 654, 999, 2131, 2257, 2308, 2322
SfcI CTRYAG 6 cut(s) 597, 800, 1251, 2277, 2484, 2655
Sfr274I CTCGAG 1 cut(s) 1590
SinI GGWCC 5 cut(s) 425, 674, 875, 1144, 2372
SlaI CTCGAG 1 cut(s) 1590
SmaI CCCGGG 1 cut(s) 881
SmiMI CAYNNNNRTG 2 cut(s) 1229, 2645
SmlI CTYRAG 4 cut(s) 563, 893, 1590, 1860
SmoI CTYRAG 4 cut(s) 563, 893, 1590, 1860
SnaBI TACGTA 1 cut(s) 1242
SseBI AGGCCT 1 cut(s) 1646
SspI AATATT 1 cut(s) 2238
SspMI CTAG 3 cut(s) 524, 1436, 1736
SstI GAGCTC 1 cut(s) 2175
StuI AGGCCT 1 cut(s) 1646
StyD4I CCNGG 5 cut(s) 878, 879, 1503, 2158, 2270
StyI CCWWGG 1 cut(s) 1647
TaaI ACNGT 8 cut(s) 128, 382, 722, 1024, 1111, 1290, 1332, 2023
TaiI ACGT 3 cut(s) 1244, 1615, 1745
TaqI TCGA 4 cut(s) 7, 831, 1591, 2403
TatI WGTACW 5 cut(s) 906, 1630, 2544, 2579, 2838
TfiI GAWTC 6 cut(s) 964, 1422, 1876, 2030, 2075, 2495
Tru1I TTAA 3 cut(s) 54, 918, 1883
Tru9I TTAA 3 cut(s) 54, 918, 1883
TscAI CASTG 7 cut(s) 168, 387, 715, 1305, 1672, 2428, 2784
TseFI GTSAC 3 cut(s) 747, 1231, 1476
Tsp45I GTSAC 3 cut(s) 747, 1231, 1476
TspGWI ACGGA 2 cut(s) 326, 2012
TspMI CCCGGG 1 cut(s) 879
TspRI CASTG 7 cut(s) 168, 387, 715, 1305, 1672, 2428, 2784
Van91I CCANNNNNTGG 2 cut(s) 185, 2258
VpaK11BI GGWCC 5 cut(s) 425, 674, 875, 1144, 2372
XapI RAATTY 3 cut(s) 1517, 1585, 2593
XceI RCATGY 4 cut(s) 1544, 1843, 2018, 2624
XcmI CCANNNNNNNNNTGG 6 cut(s) 131, 202, 773, 1322, 1645, 2239
XhoI CTCGAG 1 cut(s) 1590
XmaI CCCGGG 1 cut(s) 879
XmnI GAANNNNTTC 1 cut(s) 963
XspI CTAG 3 cut(s) 524, 1436, 1736
ZrmI AGTACT 2 cut(s) 1632, 2581
Zsp2I ATGCAT 1 cut(s) 2860
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.