Prupe.1G471400_v2.0.a1
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000493
Physical Location & Seq
Reverse (-)
39230850 .. 39237744
6895 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G471400.1

Sequence Viewer

Length: 4266 bp
ATGGAGGAACAGTGCCATGGGATGTTTTCTCCCAAGTCTTCCCACGATGAAGACGATGAAGAAGCTCTGAAATGGGCAGCCATTGAGAAGCTGCCTACTTATTTGCGTATCAGAAGAGGCATACTTACTGAGGCAGAAGGCCAAGCCAGAGAGATTGATATCAAGAATCTTGGGTCGCTAGAGAGAAGGAGTAAGTTCTTGTTGAAGCTTAAGGACCGGATTAATCGGGTTGGACTGGATATTCCAACAATTGAAGTCCGGTTTGAGCATTTGAGTGTTGAAGCAGAAGCTTATGTGGGAGGCAGGGCCTTGCCTACAATATTCAACTTTTGTGTTAACATTTTGGAGGGGTTCCTGAATTTTGTTCACGTTCTTCCAAGTAGAAAGCAACCATTACCAATCCTTGATGATGTTAGTGGAATTATCAAACCAAGAAGAATGACACTGCTTTTAGGACCCCCAAGCTCTGGAAAAACCACATTGCTATTGGCTTTGGCTGGAAAACTTGCTAAAGAGCTAAAATTTTCTGGGAGAGTTGCATATAATGGACATGGGATGGAAGAGTTTGTCCCGGAGAGGACATCGGCTTATATCAGTCAGCATGATCTCCACATAGGAGAAATGACAGTGAGAGAAACACTGGCTTTTTCAGCAAGATGCCAAGGGGTCGGACCGCGTTATGAAATGTTGGCAGAATTATCAAGGAGAGAAAAGGCTGCAAATATCATGCCAGATGCGGATCTAGATATCTACATGAAGGCAGCATCACTAGAAGGACAAGAGACCAACGTAGTTACAGATTATATACTCAAGATTTTGGGACTTGAGGTTTGCGCCGACATCATGGTGGGGGATGAAATGGTACGAGGTATTTCTGGTGGGCAAAAGAAGCGAGTCACGACAGGGGAGATGCTTGTCGGACCAGCAAGAGCACTTTTTATGGATGAGATATCAACTGGTTTAGACAGTTCAACAACATTTCAGATAGTGAATTCACTCAGACAATCCATCCACATCCTGAGTGGAACTGCTCTTATCTCTCTTCTCCAACCAGCACCAGAAACTTATGATTTATTTGATGACATAATTCTGCTGTCTGATGGACAAATCGTATACCAAGGTCCCCGAGAGAATGTGCTCGAGTTCTTCGAGCACATGGGCTTCAAATGTCCAGAGAGGAAAGGAGTAGCTGACTTCCTACAAGAAGTGACATCAAAGAAAGATCAAGAGCAGTACTGGGCACAGAAAGAAGAGCCATATAATTTTATATCTTCTAAGGAATTTGCTGAAGCATTTCAGTCATTTCATATCGGTCGAAAACTCGGTGATGAGCTTGCTACTCCATTTGACAAGTCCAAAGGTCACCCTGCAGCTTTAACAACTATGAAGTATGGTGTTAGCAAGAAGGAACTGCTCAAAGCTTGTATTTCTAGAGAATATTTGCTTATGAAGAGGAATTCGTTTGTCTACATTTTCAAAATGACCCAGCTCACTCTAATGGCTTTTATGTCAATGACGCTATTTCTCCGGACTAAGATGCACCGGGATACAGTTGCGGATGGGGGTATTTACATGGGTGCTATGTTCTTTACAATCATCATAATTATGTTTAACGGGTTCTCGGAGCTTGCCATGACTATCATGAAACTTCCTGTATTTTTCAAGCAAAGGGACCTTCTGTTCTATCCTTCATGGGCATACTCTTTACCAACATGGATCCTTAAGATCCCTATCACCTTCATAGAATGTGCTGTTTGGGTGGTCATGACATACTATGTAATTGGTTTCGATCCCAACATCGAAAGGTTTTTCAAGCAGTACCTTTTACTCCTATGCCTTAACCAGATGGCATCAGGACTATTCAGATTTATGGGGGCATTAGGGAGGAATATAATTGTTGCAAACACATTCGGGTCTTTTGCATTACTTGCAGTTCTAGTTATGGGTGGCTTTATCTTGTCACGAGAGGATGTGCAGAAGTGGTGGTTATGGGGTTACTGGGTCTCACCAATGATGTACGGCCAGAACGCTATAGCTGTCAACGAATTTCTTGGAAAGAGTTGGAGCCATGTTCCTCCTAATTCAACAGAATCATTAGGAATTATGGTCTTGAAGTCTCGCGGGGTTTTCATTGAACCATACTGGTACTGGATTGGAGTAGGAGCTACAATTGGATACATTTTTCTGTTCAATTTCTTCTACACTTTGGCCTTAAAATATCTTGATCCATTTGGGAAGCCTCAGGCAATACTATCCAAAGAGGCCTTGGCTGAGAAAACTAGTGATAGAACTGGAGATTCCATTGAGCTATCATCACGGGGAAAGAACTCTTCTGACTCAAGGAACGAAAGTCGAAGAAGTGTATCATCCAGAACATTGTCGTCGAGAGTGGGCAGCATTACTGAAGCCAACGAAAACAGGAAGCGCGGAATGGTTCTTCCTTTTGAACCTCTTTGGATTACTTTTGATGAAATCACATATGCTGTTGACATGCCCGAGGAAATGAAAACTCAAGGTATAACTGAGGATCGGCTAAAGCTTCTGAAGGGTGTGACTGGTGCTTTTAGGCCAGGAGTCTTAACAGCTCTAATGGGCATTAGTGGTGCTGGAAAGACTACTCTAATGGATGTCTTGGCAGGAAGGAAAACAGGTGGATATATTGAGGGAAACATCACAATATCTGGGCATCCAAAAAAGCAAGAAACATTTGCTCGCATATCGGGATATTGTGAGCAAACTGATATACACTCTCCTCATGTTACGGTTTACGAGTCTTTGGTTTATTCTGCATGGCTCCGGTTGCCTCCTGAGGTTGATTCCTCAACAAGAAAGATGTTTGTTGAGGAGGTCATGGAGCTTGTAGAACTGACCCCGATAAGGGAAGCGCTTGTTGGATTGCCTGGAGTGAATGGTCTCTCAACCGAGCAGCGCAAAAGGCTAACGATTGCAGTAGAGCTTGTTGCCAATCCATCCATTATATTTATGGATGAGCCAACCTCTGGCCTCGATGCCAGGGCAGCGGCAATTGTAATGAGAACAGTGAGGAATACAGTGGACACTGGGAGAACTGTAGTATGCACCATCCACCAGCCAAGCATCGACATCTTTGATGCTTTCGATGAGCTGTTTCTTTTGAAAAGGGGAGGTGAAGAAATATATGTGGGTCCTTTGGGCCGCCATTCTACCCATTTGATCAAGTACTTTGAGGAAATTGATGGAGTTCCTAAAATTAAAGATGGTTACAATCCCGCAACTTGGATGTTAGACATTACTGCAGCAGCACAAGAAGCAGCTCTTGGTGTCAACTTCACCGAAATATACAAGAACTCAGAACTCTATGGGAGAAACAAAGCTCTGATCAAGGACCTTAGTACTCCTCCAGCAGGTTCAAAAGACTTGTACTTCCCTACTCAATACTCTCAGTCTTTCTTCAGCCAGTGTATGGCCTGTCTATGGAAACAACATCTATCATACTGGCGAAACCCGCCATACAGTGCAGTGAGACTCTTGTTCACAACTTTCATAGCTTTAATGTTCGGGACGATATTCTGGGATCTTGGCTCCAAAAGGAGAAGCCAACAAGACCTTTTCAATGCAATGGGTTCCATGTATGCTGCTGTTCTCTTCATTGGTGTACAAAATGCTTCATCAGTGCAGCCAGTTGTGGCTATTGAGAGGACAGTCTTTTACAGAGAAAGGGCAGCTGGAATGTACTCAGCCTTGCCATATGCCTTTGGACAGGTTGTGATTGAGCTCCCATACATTTTTGTTCAAACCATCATATACGGAGTTATAGTATACGCCATGATCGGATTTGATTGGACAGTGAGCAAATTTTTATGGTATCTCTTCTTCATGTACTTCACTTTCCTATACTTCACATTCTACGGCATGATGACCGTAGCCGTTACTCCCAACCACAACATTGCTGCCATAGTCTCCTCTGCCTTCTATGCTATATGGAACCTTTTCTCAGGATTCATCATTCCAAGAACGAGGATGCCGATTTGGTGGAGATGGTACTACTGGATTTGCCCTGTTTCGTACACACTGTATGGATTAGTTGCTTCACAATTTGGAGACATTAAAGAAATATTTGATTCAGGTGAAAGTGCTGGTAAAAGTGTGGAACACTTTGTAAAGGACTACTTTGGCTACAGACAGGACTTTCTGGGAGTAGTTGCAGCCGTCCATGTCGGGATTTGCGTGCTCTTCGGCTTCACCTTTGCCTTCTCAATCAAGGTGTTCAACTTCCAAAAGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1422

Amino Acids

160.72

Weight (kDa)

7.1

Isoelectric Point (pI)

43.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000493)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29820 FvH4_2g29820 FvH4_2g29822 FvH4_2g29824 FvH4_2g29824 FvH4_2g29824 FvH4_2g29840 FvH4_2g29840 FvH4_2g29840 FvH4_5g00550 FvH4_5g00550
malus_domestica MD02G1032700.v1.1 MD08G1140900.v1.1 MD08G1141400.v1.1 MD15G1117800.v1.1 MD15G1117900.v1.1
prunus_persica Prupe.1G471200_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471300_v2.0.a1 Prupe.1G471400_v2.0.a1 Prupe.7G242900_v2.0.a1
pyrus_communis pycom02g02690 pycom08g11890
rosa_chinensis RchiOBHm_Chr2g0111741 RchiOBHm_Chr2g0145991 RchiOBHm_Chr6g0298851 RchiOBHm_Chr6g0298871 RchiOBHm_Chr6g0298891 RchiOBHm_Chr6g0298901 RchiOBHm_Chr6g0298911 RchiOBHm_Chr7g0201801 RchiOBHm_Chr7g0211531 RchiOBHm_Chr7g0214601
rosa_laevigata RLG00000002931 RLG00000003000 RLG00000003647 RLG00000011476 RLG00000011479
rosa_multiflora Rmu_sc0001030.1_g000012 Rmu_sc0001548.1_g000041 Rmu_ssc0000397.1_g000033 Rmu_ssc0000397.1_g000036 Rmu_ssc0000397.1_g000037 Rmu_ssc0000397.1_g000039 Rmu_ssc0000397.1_g000048
rosa_roxburghii Rroxscaffold_1G00003830 Rroxscaffold_3G00247810 Rroxscaffold_3G00255060 Rroxscaffold_7G00169220 Rroxscaffold_7G00169230 Rroxscaffold_7G00169280
rosa_rugosa Rorug02G0223600 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283100 Rorug06G0283200 Rorug06G0283300 Rorug06G0283400 Rorug06G0283500 Rorug07G0066000
rosa_samantha Rh2AG511300 Rh2CG235100 Rh2CG496400 Rh2DG330900 Rh6BG403100 Rh6BG403300 Rh6BG403400 Rh6BG403500 Rh6CG408700 Rh6CG408900 Rh6CG409000 Rh6CG409200 Rh6DG395800 Rh6DG395900 Rh6DG396000 Rh6DG396200 Rh7AG193400 Rh7BG195100 Rh7BG436600 Rh7DG199300 Rh7DG265500
rosa_wichuraiana Rw2G016900 Rw6G034570 Rw6G034580 Rw6G034590 Rw6G034600 Rw7G016900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3374
AccB7I CCANNNNNTGG 3 cut(s) 467, 2999, 3442
AccI GTMKAC 3 cut(s) 1113, 1467, 3798
AccII CGCG 3 cut(s) 676, 2121, 2427
AccIII TCCGGA 1 cut(s) 1527
AciI CCGC 9 cut(s) 674, 737, 1556, 2121, 2427, 3020, 3175, 3249, 3485
AclWI GGATC 8 cut(s) 747, 1711, 1720, 1724, 1784, 2219, 2535, 3561
AcoI YGGCCR 1 cut(s) 2020
AcsI RAATTY 7 cut(s) 358, 521, 991, 1280, 1456, 2045, 3833
AcuI CTGAAG 4 cut(s) 1308, 2424, 2564, 3415
AfeI AGCGCT 1 cut(s) 2886
AfiI CCNNNNNNNGG 8 cut(s) 467, 2877, 2878, 2999, 3255, 3383, 3442, 3453
AflII CTTAAG 2 cut(s) 209, 1721
AhlI ACTAGT 1 cut(s) 2279
AjnI CCWGG 3 cut(s) 2569, 2899, 3011
AjuI GAANNNNNNNTTGG 4 cut(s) 2874, 2906, 3279, 3311
AloI GAACNNNNNNTCC 2 cut(s) 1664, 1696
Alw21I GWGCWC 5 cut(s) 934, 1140, 1155, 3756, 4212
Alw26I GTCTC 7 cut(s) 776, 2008, 2121, 2918, 3496, 3943, 4074
AlwI GGATC 8 cut(s) 747, 1711, 1720, 1724, 1784, 2219, 2535, 3561
Ama87I CYCGRG 3 cut(s) 1125, 1139, 2495
Aor13HI TCCGGA 1 cut(s) 1527
Aor51HI AGCGCT 1 cut(s) 2886
AoxI GGCC 9 cut(s) 139, 306, 2020, 2208, 2262, 2567, 3001, 3172, 3444
ApoI RAATTY 7 cut(s) 358, 521, 991, 1280, 1456, 2045, 3833
ArsI GACNNNNNNTTYG 2 cut(s) 813, 845
AseI ATTAAT 1 cut(s) 222
Asp700I GAANNNNTTC 2 cut(s) 1293, 3968
AspLEI GCGC 4 cut(s) 836, 2427, 2887, 2931
AsuC2I CCSGG 2 cut(s) 572, 1544
AsuHPI GGTGA 8 cut(s) 1337, 1355, 1726, 1998, 3158, 3301, 4118, 4213
AvaI CYCGRG 3 cut(s) 1125, 1139, 2495
AvaII GGWCC 8 cut(s) 214, 455, 671, 920, 1121, 1672, 3164, 3364
AxyI CCTNAGG 2 cut(s) 2241, 2808
BaeGI GKGCMC 1 cut(s) 1243
BamHI GGATCC 1 cut(s) 1716
BanII GRGCYC 1 cut(s) 3756
BarI GAAGNNNNNNTAC 2 cut(s) 3836, 3868
BauI CACGAG 1 cut(s) 1962
BbsI GAAGAC 2 cut(s) 30, 57
Bbv12I GWGCWC 5 cut(s) 934, 1140, 1155, 3756, 4212
BceAI ACGGC 4 cut(s) 2035, 3890, 3904, 4172
BciT130I CCWGG 3 cut(s) 2571, 2901, 3013
BciVI GTATCC 2 cut(s) 1540, 2168
BclI TGATCA 2 cut(s) 3192, 3357
BcnI CCSGG 2 cut(s) 572, 1544
BcoDI GTCTC 7 cut(s) 776, 2008, 2121, 2918, 3496, 3943, 4074
BcuI ACTAGT 1 cut(s) 2279
BfaI CTAG 6 cut(s) 179, 743, 770, 1431, 1937, 2280
BfmI CTRYAG 5 cut(s) 1368, 2031, 3069, 3273, 4156
BfoI RGCGCY 1 cut(s) 2888
BfrI CTTAAG 2 cut(s) 209, 1721
BfuAI ACCTGC 1 cut(s) 3374
BfuI GTATCC 2 cut(s) 1540, 2168
BmcAI AGTACT 3 cut(s) 1235, 3200, 3373
Bme1390I CCNGG 5 cut(s) 572, 1544, 2571, 2901, 3013
Bme18I GGWCC 8 cut(s) 214, 455, 671, 920, 1121, 1672, 3164, 3364
BmeT110I CYCGRG 3 cut(s) 1125, 1139, 2495
BmrFI CCNGG 5 cut(s) 572, 1544, 2571, 2901, 3013
BmrI ACTGGG 3 cut(s) 1246, 2008, 3069
BmuI ACTGGG 3 cut(s) 1246, 2008, 3069
BpiI GAAGAC 2 cut(s) 30, 57
BplI GAGNNNNNCTC 2 cut(s) 2981, 3013
BpmI CTGGAG 3 cut(s) 2313, 2922, 3363
BpuEI CTTGAG 4 cut(s) 794, 845, 2323, 2496
BpuMI CCSGG 2 cut(s) 572, 1544
BsaBI GATNNNNATC 3 cut(s) 158, 738, 1730
BsaI GGTCTC 3 cut(s) 776, 2008, 2918
BsaJI CCNNGG 6 cut(s) 16, 661, 1117, 2265, 2496, 3012
BsaWI WCCGGW 4 cut(s) 216, 258, 1527, 2796
BsaXI ACNNNNNCTCC 3 cut(s) 26, 3780, 3810
Bsc4I CCNNNNNNNGG 8 cut(s) 467, 2877, 2878, 2999, 3255, 3383, 3442, 3453
Bse21I CCTNAGG 2 cut(s) 2241, 2808
Bse3DI GCAATG 3 cut(s) 479, 3603, 3924
Bse8I GATNNNNATC 3 cut(s) 158, 738, 1730
BseAI TCCGGA 1 cut(s) 1527
BseBI CCWGG 3 cut(s) 2571, 2901, 3013
BseDI CCNNGG 6 cut(s) 16, 661, 1117, 2265, 2496, 3012
BseJI GATNNNNATC 3 cut(s) 158, 738, 1730
BseLI CCNNNNNNNGG 8 cut(s) 467, 2877, 2878, 2999, 3255, 3383, 3442, 3453
BseMI GCAATG 3 cut(s) 479, 3603, 3924
BseRI GAGGAG 4 cut(s) 2742, 2858, 3366, 3931
BseSI GKGCMC 1 cut(s) 1243
BseYI CCCAGC 1 cut(s) 1485
BsgI GTGCAG 3 cut(s) 1994, 3516, 3674
Bsh1236I CGCG 3 cut(s) 676, 2121, 2427
Bsh1285I CGRYCG 1 cut(s) 1315
BshFI GGCC 9 cut(s) 141, 308, 2022, 2210, 2264, 2569, 3003, 3174, 3446
BsiEI CGRYCG 1 cut(s) 1315
BsiHKAI GWGCWC 5 cut(s) 934, 1140, 1155, 3756, 4212
BsiHKCI CYCGRG 3 cut(s) 1125, 1139, 2495
BsiSI CCGG 6 cut(s) 217, 259, 572, 1528, 1543, 2797
BslFI GGGAC 5 cut(s) 554, 834, 1107, 1685, 3553
BslI CCNNNNNNNGG 8 cut(s) 467, 2877, 2878, 2999, 3255, 3383, 3442, 3453
BsmAI GTCTC 7 cut(s) 776, 2008, 2121, 2918, 3496, 3943, 4074
BsmFI GGGAC 5 cut(s) 554, 834, 1107, 1685, 3553
BsnI GGCC 9 cut(s) 141, 308, 2022, 2210, 2264, 2569, 3003, 3174, 3446
Bso31I GGTCTC 3 cut(s) 776, 2008, 2918
BsoBI CYCGRG 3 cut(s) 1125, 1139, 2495
Bsp1286I GDGCHC 6 cut(s) 934, 1140, 1155, 1243, 3756, 4212
Bsp13I TCCGGA 1 cut(s) 1527
Bsp1407I TGTACA 1 cut(s) 3634
Bsp19I CCATGG 1 cut(s) 16
BspACI CCGC 9 cut(s) 674, 737, 1556, 2121, 2427, 3020, 3175, 3249, 3485
BspANI GGCC 9 cut(s) 141, 308, 2022, 2210, 2264, 2569, 3003, 3174, 3446
BspEI TCCGGA 1 cut(s) 1527
BspFNI CGCG 3 cut(s) 676, 2121, 2427
BspHI TCATGA 2 cut(s) 1641, 1764
BspMAI CTGCAG 2 cut(s) 1372, 3277
BspMI ACCTGC 1 cut(s) 3374
BspPI GGATC 8 cut(s) 747, 1711, 1720, 1724, 1784, 2219, 2535, 3561
BspQI GCTCTTC 2 cut(s) 1245, 4217
BspTI CTTAAG 2 cut(s) 209, 1721
BspTNI GGTCTC 3 cut(s) 776, 2008, 2918
BsrDI GCAATG 3 cut(s) 479, 3603, 3924
BsrGI TGTACA 1 cut(s) 3634
BssECI CCNNGG 6 cut(s) 16, 661, 1117, 2265, 2496, 3012
BssNAI GTATAC 2 cut(s) 1114, 3799
BssSI CACGAG 1 cut(s) 1962
BssT1I CCWWGG 4 cut(s) 16, 661, 1117, 2265
Bst1107I GTATAC 2 cut(s) 1114, 3799
Bst2BI CACGAG 1 cut(s) 1962
Bst2UI CCWGG 3 cut(s) 2571, 2901, 3013
Bst6I CTCTTC 9 cut(s) 109, 555, 1047, 1245, 1445, 2335, 3629, 3854, 4217
BstAFI CTTAAG 2 cut(s) 209, 1721
BstAPI GCANNNNNTGC 1 cut(s) 1928
BstAUI TGTACA 1 cut(s) 3634
BstC8I GCNNGC 4 cut(s) 1335, 1629, 2713, 4208
BstDSI CCRYGG 1 cut(s) 16
BstEII GGTNACC 1 cut(s) 1361
BstENI CCTNNNNNAGG 1 cut(s) 3381
BstFNI CGCG 3 cut(s) 676, 2121, 2427
BstH2I RGCGCY 1 cut(s) 2888
BstHHI GCGC 4 cut(s) 836, 2427, 2887, 2931
BstMAI GTCTC 7 cut(s) 776, 2008, 2121, 2918, 3496, 3943, 4074
BstMCI CGRYCG 1 cut(s) 1315
BstMWI GCNNNNNNNGC 9 cut(s) 650, 889, 1928, 2800, 2935, 3017, 3287, 3484, 3953
BstNI CCWGG 3 cut(s) 2571, 2901, 3013
BstNSI RCATGY 1 cut(s) 2494
BstPI GGTNACC 1 cut(s) 1361
BstSCI CCNGG 5 cut(s) 570, 1542, 2569, 2899, 3011
BstSFI CTRYAG 5 cut(s) 1368, 2031, 3069, 3273, 4156
BstSLI GKGCMC 1 cut(s) 1243
BstUI CGCG 3 cut(s) 676, 2121, 2427
BstV2I GAAGAC 2 cut(s) 30, 57
BstX2I RGATCY 4 cut(s) 739, 1716, 1725, 3553
BstYI RGATCY 4 cut(s) 739, 1716, 1725, 3553
BstZ17I GTATAC 2 cut(s) 1114, 3799
Bsu36I CCTNAGG 2 cut(s) 2241, 2808
BsuI GTATCC 2 cut(s) 1540, 2168
BsuRI GGCC 9 cut(s) 141, 308, 2022, 2210, 2264, 2569, 3003, 3174, 3446
BtgI CCRYGG 1 cut(s) 16
BtsI GCAGTG 2 cut(s) 443, 3504
BveI ACCTGC 1 cut(s) 3374
Cac8I GCNNGC 4 cut(s) 1335, 1629, 2713, 4208
CciI TCATGA 2 cut(s) 1641, 1764
CfoI GCGC 4 cut(s) 836, 2427, 2887, 2931
CpoI CGGWCCG 1 cut(s) 671
CseI GACGC 1 cut(s) 1525
CspI CGGWCCG 1 cut(s) 671
EaeI YGGCCR 1 cut(s) 2020
Eam1104I CTCTTC 9 cut(s) 109, 555, 1047, 1245, 1445, 2335, 3629, 3854, 4217
EarI CTCTTC 9 cut(s) 109, 555, 1047, 1245, 1445, 2335, 3629, 3854, 4217
Ecl136II GAGCTC 1 cut(s) 3754
Eco130I CCWWGG 4 cut(s) 16, 661, 1117, 2265
Eco147I AGGCCT 1 cut(s) 2264
Eco24I GRGCYC 1 cut(s) 3756
Eco31I GGTCTC 3 cut(s) 776, 2008, 2918
Eco32I GATATC 3 cut(s) 160, 748, 951
Eco47I GGWCC 8 cut(s) 214, 455, 671, 920, 1121, 1672, 3164, 3364
Eco47III AGCGCT 1 cut(s) 2886
Eco53kI GAGCTC 1 cut(s) 3754
Eco57I CTGAAG 4 cut(s) 1308, 2424, 2564, 3415
Eco81I CCTNAGG 2 cut(s) 2241, 2808
Eco88I CYCGRG 3 cut(s) 1125, 1139, 2495
Eco91I GGTNACC 1 cut(s) 1361
EcoICRI GAGCTC 1 cut(s) 3754
EcoNI CCTNNNNNAGG 1 cut(s) 3381
EcoO109I RGGNCCY 6 cut(s) 306, 455, 1121, 1672, 3164, 3364
EcoO65I GGTNACC 1 cut(s) 1361
EcoRI GAATTC 2 cut(s) 991, 1456
EcoRII CCWGG 3 cut(s) 2569, 2899, 3011
EcoRV GATATC 3 cut(s) 160, 748, 951
EcoT14I CCWWGG 4 cut(s) 16, 661, 1117, 2265
EcoT38I GRGCYC 1 cut(s) 3756
ErhI CCWWGG 4 cut(s) 16, 661, 1117, 2265
FalI AAGNNNNNCTT 4 cut(s) 3279, 3311, 4133, 4165
FaqI GGGAC 5 cut(s) 554, 834, 1107, 1685, 3553
FauI CCCGC 3 cut(s) 2114, 3256, 3492
FauNDI CATATG 2 cut(s) 2479, 3727
FbaI TGATCA 2 cut(s) 3192, 3357
FblI GTMKAC 3 cut(s) 1113, 1467, 3798
FriOI GRGCYC 1 cut(s) 3756
FspBI CTAG 6 cut(s) 179, 743, 770, 1431, 1937, 2280
GlaI GCGC 4 cut(s) 835, 2426, 2886, 2930
GsaI CCCAGC 1 cut(s) 1489
GsuI CTGGAG 3 cut(s) 2313, 2922, 3363
HaeII RGCGCY 1 cut(s) 2888
HaeIII GGCC 9 cut(s) 141, 308, 2022, 2210, 2264, 2569, 3003, 3174, 3446
HapII CCGG 6 cut(s) 217, 259, 572, 1528, 1543, 2797
HgaI GACGC 1 cut(s) 1525
HhaI GCGC 4 cut(s) 836, 2427, 2887, 2931
Hin6I GCGC 4 cut(s) 834, 2425, 2885, 2929
HinP1I GCGC 4 cut(s) 834, 2425, 2885, 2929
HincII GTYRAC 4 cut(s) 337, 2041, 2488, 3304
HindII GTYRAC 4 cut(s) 337, 2041, 2488, 3304
HindIII AAGCTT 4 cut(s) 206, 288, 1419, 2537
HpaI GTTAAC 1 cut(s) 337
HpaII CCGG 6 cut(s) 217, 259, 572, 1528, 1543, 2797
HphI GGTGA 8 cut(s) 1337, 1355, 1726, 1998, 3158, 3301, 4118, 4213
Hpy99I CGWCG 1 cut(s) 2386
HpyCH4IV ACGT 2 cut(s) 369, 789
HpyF10VI GCNNNNNNNGC 9 cut(s) 650, 889, 1928, 2800, 2935, 3017, 3287, 3484, 3953
HpySE526I ACGT 2 cut(s) 369, 789
HspAI GCGC 4 cut(s) 834, 2425, 2885, 2929
Kpn2I TCCGGA 1 cut(s) 1527
Ksp22I TGATCA 2 cut(s) 3192, 3357
KspAI GTTAAC 1 cut(s) 337
LguI GCTCTTC 2 cut(s) 1245, 4217
LmnI GCTCC 7 cut(s) 1624, 2064, 2162, 2799, 2854, 3566, 3759
MaeI CTAG 6 cut(s) 179, 743, 770, 1431, 1937, 2280
MaeII ACGT 2 cut(s) 369, 789
MfeI CAATTG 3 cut(s) 249, 2169, 3024
MflI RGATCY 4 cut(s) 739, 1716, 1725, 3553
MhlI GDGCHC 6 cut(s) 934, 1140, 1155, 1243, 3756, 4212
MlyI GAGTC 5 cut(s) 903, 2330, 2583, 2780, 3498
MmeI TCCRAC 7 cut(s) 211, 269, 649, 898, 1072, 2042, 2872
MroI TCCGGA 1 cut(s) 1527
MroXI GAANNNNTTC 2 cut(s) 1293, 3968
MslI CAYNNNNRTG 4 cut(s) 273, 845, 1496, 1604
MspA1I CMGCKG 2 cut(s) 3020, 3704
MspCI CTTAAG 2 cut(s) 209, 1721
MspI CCGG 6 cut(s) 217, 259, 572, 1528, 1543, 2797
MspR9I CCNGG 5 cut(s) 572, 1544, 2571, 2901, 3013
MunI CAATTG 3 cut(s) 249, 2169, 3024
MvaI CCWGG 3 cut(s) 2571, 2901, 3013
MvnI CGCG 3 cut(s) 676, 2121, 2427
MwoI GCNNNNNNNGC 9 cut(s) 650, 889, 1928, 2800, 2935, 3017, 3287, 3484, 3953
NciI CCSGG 2 cut(s) 572, 1544
NcoI CCATGG 1 cut(s) 16
NdeI CATATG 2 cut(s) 2479, 3727
NmuCI GTSAC 5 cut(s) 895, 1207, 1361, 1959, 2551
NspI RCATGY 1 cut(s) 2494
PaeR7I CTCGAG 1 cut(s) 1139
PagI TCATGA 2 cut(s) 1641, 1764
PceI AGGCCT 1 cut(s) 2264
PciSI GCTCTTC 2 cut(s) 1245, 4217
PcsI WCGNNNNNNNCGW 4 cut(s) 51, 1146, 4001, 4203
PdmI GAANNNNTTC 2 cut(s) 1293, 3968
PfeI GAWTC 6 cut(s) 166, 2090, 2297, 2816, 3978, 4100
PflMI CCANNNNNTGG 3 cut(s) 467, 2999, 3442
PfoI TCCNGGA 1 cut(s) 570
PleI GAGTC 5 cut(s) 902, 2330, 2582, 2779, 3498
PpsI GAGTC 5 cut(s) 902, 2330, 2582, 2779, 3498
PpuMI RGGWCCY 5 cut(s) 455, 1121, 1672, 3164, 3364
PshBI ATTAAT 1 cut(s) 222
Psp124BI GAGCTC 1 cut(s) 3756
Psp5II RGGWCCY 5 cut(s) 455, 1121, 1672, 3164, 3364
Psp6I CCWGG 3 cut(s) 2569, 2899, 3011
PspEI GGTNACC 1 cut(s) 1361
PspFI CCCAGC 1 cut(s) 1485
PspGI CCWGG 3 cut(s) 2569, 2899, 3011
PspPPI RGGWCCY 5 cut(s) 455, 1121, 1672, 3164, 3364
PspXI VCTCGAGB 1 cut(s) 1139
PstI CTGCAG 2 cut(s) 1372, 3277
PsuI RGATCY 4 cut(s) 739, 1716, 1725, 3553
PvuII CAGCTG 1 cut(s) 3704
RseI CAYNNNNRTG 4 cut(s) 273, 845, 1496, 1604
Rsr2I CGGWCCG 1 cut(s) 671
RsrII CGGWCCG 1 cut(s) 671
SacI GAGCTC 1 cut(s) 3756
SapI GCTCTTC 2 cut(s) 1245, 4217
ScaI AGTACT 3 cut(s) 1235, 3200, 3373
SchI GAGTC 5 cut(s) 903, 2330, 2583, 2780, 3498
ScrFI CCNGG 5 cut(s) 572, 1544, 2571, 2901, 3013
SduI GDGCHC 6 cut(s) 934, 1140, 1155, 1243, 3756, 4212
SfcI CTRYAG 5 cut(s) 1368, 2031, 3069, 3273, 4156
Sfr274I CTCGAG 1 cut(s) 1139
SinI GGWCC 8 cut(s) 214, 455, 671, 920, 1121, 1672, 3164, 3364
SlaI CTCGAG 1 cut(s) 1139
SmiMI CAYNNNNRTG 4 cut(s) 273, 845, 1496, 1604
SmlI CTYRAG 7 cut(s) 209, 809, 824, 1139, 1721, 2338, 2511
SmoI CTYRAG 7 cut(s) 209, 809, 824, 1139, 1721, 2338, 2511
SpeI ACTAGT 1 cut(s) 2279
SseBI AGGCCT 1 cut(s) 2264
SsiI CCGC 9 cut(s) 674, 737, 1556, 2121, 2427, 3020, 3175, 3249, 3485
SspI AATATT 3 cut(s) 321, 1439, 4095
SspMI CTAG 6 cut(s) 179, 743, 770, 1431, 1937, 2280
SstI GAGCTC 1 cut(s) 3756
StuI AGGCCT 1 cut(s) 2264
StyD4I CCNGG 5 cut(s) 570, 1542, 2569, 2899, 3011
StyI CCWWGG 4 cut(s) 16, 661, 1117, 2265
TaiI ACGT 2 cut(s) 372, 792
TaqII GACCGA 1 cut(s) 1301
TatI WGTACW 7 cut(s) 1233, 3198, 3371, 3399, 3634, 3711, 3858
TauI GCSGC 2 cut(s) 3023, 3177
TfiI GAWTC 6 cut(s) 166, 2090, 2297, 2816, 3978, 4100
TseFI GTSAC 5 cut(s) 895, 1207, 1361, 1959, 2551
Tsp45I GTSAC 5 cut(s) 895, 1207, 1361, 1959, 2551
TspGWI ACGGA 1 cut(s) 3801
Van91I CCANNNNNTGG 3 cut(s) 467, 2999, 3442
Vha464I CTTAAG 2 cut(s) 209, 1721
VpaK11BI GGWCC 8 cut(s) 214, 455, 671, 920, 1121, 1672, 3164, 3364
VspI ATTAAT 1 cut(s) 222
XagI CCTNNNNNAGG 1 cut(s) 3381
XapI RAATTY 7 cut(s) 358, 521, 991, 1280, 1456, 2045, 3833
XbaI TCTAGA 2 cut(s) 742, 1430
XceI RCATGY 1 cut(s) 2494
XcmI CCANNNNNNNNNTGG 5 cut(s) 484, 1019, 2145, 2263, 2980
XhoI CTCGAG 1 cut(s) 1139
XmiI GTMKAC 3 cut(s) 1113, 1467, 3798
XmnI GAANNNNTTC 2 cut(s) 1293, 3968
XspI CTAG 6 cut(s) 179, 743, 770, 1431, 1937, 2280
ZrmI AGTACT 3 cut(s) 1235, 3200, 3373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.