Prupe.1G361700_v2.0.a1

hydrolase activity, acting on ester bonds

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000393
Physical Location & Seq
Forward (+)
33292869 .. 33294907
2039 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G361700.1

Sequence Viewer

Length: 1134 bp
ATGCAGAAGTACTTTTCATGTGTGAATCTGCTTTCTGCAACTTTTTCGAAAATTTTAGTTATACTAGTACTTCAAGTGCAATTATGTCTGTGGTTTTGCACCCCAACATATACAGAAGCAGCCAAGGAGCAGCTACCTGCTGCAGAAAATGGGACGTTAAAATTTCCGGGGCTTTTTGCCTTTGGAGATTCAATTCTTGATACTGGCAACAACAATAATCTTGCAACTGTAGCTAAATGCAATTTCCCGCCCTATGGAAGAGATTTAGTGGGAGGCATACCAACAGGAAGATTTGGCAATGGAAAAGTGCTCTCAGACTTGATAGCCGAAGGCTTGGGAATCAAAGAACTTTTGCCACCATATCTTGACCCAAACCTGCAGAGCCCTGATCTCCCTACTGGTGTATGCTTTGCGTCAGGTAGCTCTGGTTATGATCCTCTAACACCAACCATAACGGGAACTTTATCTCTATTCAAACAATTAGAACTCTTCAAAGAGTACATTGTGAAGCTGACAGGGATTATTGGAGAAGAGAGAGCAAGAGCCATCATAGCCAACAGTCTATATTTAGTTTCAGCAGGCAACAATGACATTTTGATTAGTTATTCTCTCATTGCTAGAAAGCTTCACTACGATTTTCCTTCATATGCTGCTCTTTTAGTCAGCATGGCTTCTACTTTCCTCCGGGATTTATATAGCCTCGGGGCAAGGCGAATTGGTGTTTTCAGTACAGCAGCAGTGGGATGCTCCCCATTTGACAGAAATAGAGGAGGCTTACTGAGAGAGTGTTTGGAGCTGGAATTGGAAGAAGCAGCATGGTTCAATTCTCAGCTATCATCTGAACTAGATTACATCAAAACCAACTTTACAGAAGCCAAGCTAGTCTTTTTGGATATCTACCACCCTCTTCTTGATCTCAATCAACATCCTCACAAATCAGGATTCCAAGTAGAGAAGTTTGGATGTTGTGGTACTGGAACAATAGGAGTAGCGGTATTGTGTAACGAATTCAGTCCGTTCACATGTACAGATGCATCTAAATACCTCTATTGGGATGCAGTTCATCCCACAGAAAGAGCTCTCAGAATCGTTGCTTCTCAGATTCTTAAAAAATACATAAATAGTTTCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipase_GDSL

Protein Analysis

378

Amino Acids

41.46

Weight (kDa)

5.81

Isoelectric Point (pI)

33.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000393)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G20120 AT1G20132
fragaria_vesca FvH4_1g11330 FvH4_1g11340 FvH4_1g11341 FvH4_1g11342 FvH4_1g11390 FvH4_1g11390 FvH4_2g38111 FvH4_2g38111 FvH4_2g38111 FvH4_5g34670
malus_domestica MD02G1126900.v1.1 MD02G1127000.v1.1 MD02G1127100.v1.1 MD15G1008700.v1.1 MD15G1241600.v1.1 MD15G1241700.v1.1
prunus_persica Prupe.1G361600_v2.0.a1 Prupe.1G361700_v2.0.a1 Prupe.7G172300_v2.0.a1
pyrus_communis pycom02g09900 pycom02g09910 pycom02g09920 pycom15g00720 pycom15g21320
rosa_chinensis RchiOBHm_Chr2g0098851 RchiOBHm_Chr2g0098861 RchiOBHm_Chr2g0098871 RchiOBHm_Chr2g0098881 RchiOBHm_Chr2g0098921 RchiOBHm_Chr2g0130201 RchiOBHm_Chr6g0303431 RchiOBHm_Chr7g0235831
rosa_laevigata RLG00000001135 RLG00000011086 RLG00000016830 RLG00000016834 RLG00000019130
rosa_multiflora Rmu_co8160810.1_g000001 Rmu_co8282213.1_g000001 Rmu_co8476509.1_g000001 Rmu_sc0007686.1_g000001 Rmu_sc0008564.1_g000006 Rmu_sc0008564.1_g000009 Rmu_sc0008564.1_g000011 Rmu_sc0008564.1_g000016 Rmu_sc0008940.1_g000006 Rmu_sc0008941.1_g000009 Rmu_sc0010460.1_g000019 Rmu_sc0027015.1_g000001 Rmu_sc0027115.1_g000001 Rmu_sc0039572.1_g000001 Rmu_ssc0000114.1_g000053
rosa_roxburghii Rroxscaffold_2G00143590 Rroxscaffold_2G00143660 Rroxscaffold_2G00143670 Rroxscaffold_2G00143680 Rroxscaffold_7G00164780
rosa_rugosa Rorug02G0075000 Rorug02G0075100 Rorug02G0075200 Rorug02G0291100 Rorug02G0291200 Rorug02G0291300
rosa_samantha Rh2AG123000 Rh2AG123100 Rh2AG123200 Rh2AG123400 Rh2AG123800 Rh2AG123900 Rh2AG124200 Rh2AG124400 Rh2AG343000 Rh2BG126600 Rh2BG126700 Rh2BG126900 Rh2BG127100 Rh2BG127400 Rh2BG127600 Rh2BG350800 Rh2CG127600 Rh2CG127700 Rh2CG127800 Rh2CG128000 Rh2CG128300 Rh2CG128500 Rh2CG330100 Rh6AG435600 Rh6CG447600 Rh6DG434300 Rh7AG447900 Rh7BG420100 Rh7CG468400
rosa_wichuraiana Rw0G004290 Rw2G009510 Rw2G009550 Rw2G027630 Rw2G027650 Rw6G037700 Rw7G037230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 145, 384
AciI CCGC 2 cut(s) 248, 992
AclWI GGATC 1 cut(s) 428
AcsI RAATTY 3 cut(s) 51, 161, 1007
AfaI GTAC 6 cut(s) 11, 69, 500, 730, 973, 1027
AfiI CCNNNNNNNGG 2 cut(s) 254, 1051
AflIII ACRYGT 1 cut(s) 1022
AgsI TTSAA 5 cut(s) 74, 192, 475, 493, 823
AhlI ACTAGT 1 cut(s) 64
AluBI AGCT 9 cut(s) 133, 233, 423, 511, 625, 796, 832, 880, 1079
AluI AGCT 9 cut(s) 133, 233, 423, 511, 625, 796, 832, 880, 1079
Alw21I GWGCWC 2 cut(s) 312, 1081
AlwI GGATC 1 cut(s) 428
Ama87I CYCGRG 1 cut(s) 701
ApeKI GCWGC 6 cut(s) 119, 130, 140, 650, 734, 812
ApoI RAATTY 3 cut(s) 51, 161, 1007
AsuC2I CCSGG 2 cut(s) 168, 686
AsuII TTCGAA 1 cut(s) 47
AvaI CYCGRG 1 cut(s) 701
BanII GRGCYC 2 cut(s) 386, 1081
Bbv12I GWGCWC 2 cut(s) 312, 1081
BbvI GCAGC 6 cut(s) 127, 131, 142, 637, 746, 824
BccI CCATC 1 cut(s) 554
BcgI CGANNNNNNTGC 2 cut(s) 27, 61
BcnI CCSGG 2 cut(s) 168, 686
BcuI ACTAGT 1 cut(s) 64
BfaI CTAG 4 cut(s) 65, 618, 845, 881
BfmI CTRYAG 3 cut(s) 141, 228, 377
BfuAI ACCTGC 2 cut(s) 145, 384
BisI GCNGC 6 cut(s) 120, 131, 141, 651, 735, 813
BlsI GCNGC 6 cut(s) 121, 132, 142, 652, 736, 814
BmcAI AGTACT 2 cut(s) 11, 69
Bme1390I CCNGG 2 cut(s) 168, 686
BmeT110I CYCGRG 1 cut(s) 701
BmrFI CCNGG 2 cut(s) 168, 686
BmsI GCATC 4 cut(s) 734, 1021, 1043, 1045
Bpu14I TTCGAA 1 cut(s) 47
BpuMI CCSGG 2 cut(s) 168, 686
BsaBI GATNNNNATC 1 cut(s) 918
BsaJI CCNNGG 3 cut(s) 123, 167, 700
BsaXI ACNNNNNCTCC 2 cut(s) 978, 1008
Bsc4I CCNNNNNNNGG 2 cut(s) 254, 1051
Bse1I ACTGG 3 cut(s) 208, 403, 979
Bse3DI GCAATG 2 cut(s) 304, 612
Bse8I GATNNNNATC 1 cut(s) 918
BseDI CCNNGG 3 cut(s) 123, 167, 700
BseGI GGATG 5 cut(s) 749, 925, 968, 1060, 1063
BseJI GATNNNNATC 1 cut(s) 918
BseLI CCNNNNNNNGG 2 cut(s) 254, 1051
BseMI GCAATG 2 cut(s) 304, 612
BseMII CTCAG 5 cut(s) 327, 770, 842, 1096, 1112
BseNI ACTGG 3 cut(s) 208, 403, 979
BseRI GAGGAG 1 cut(s) 783
BseXI GCAGC 6 cut(s) 127, 131, 142, 637, 746, 824
BsiHKAI GWGCWC 2 cut(s) 312, 1081
BsiHKCI CYCGRG 1 cut(s) 701
BsiSI CCGG 2 cut(s) 167, 685
BslFI GGGAC 1 cut(s) 166
BslI CCNNNNNNNGG 2 cut(s) 254, 1051
BsmFI GGGAC 1 cut(s) 166
BsoBI CYCGRG 1 cut(s) 701
Bsp119I TTCGAA 1 cut(s) 47
Bsp1286I GDGCHC 3 cut(s) 312, 386, 1081
Bsp1407I TGTACA 1 cut(s) 1025
Bsp143I GATC 3 cut(s) 388, 433, 913
BspACI CCGC 2 cut(s) 248, 992
BspCNI CTCAG 5 cut(s) 326, 771, 841, 1095, 1111
BspMAI CTGCAG 2 cut(s) 145, 381
BspMI ACCTGC 2 cut(s) 145, 384
BspPI GGATC 1 cut(s) 428
BspT104I TTCGAA 1 cut(s) 47
BsrDI GCAATG 2 cut(s) 304, 612
BsrGI TGTACA 1 cut(s) 1025
BsrI ACTGG 3 cut(s) 208, 403, 979
BssECI CCNNGG 3 cut(s) 123, 167, 700
BssMI GATC 3 cut(s) 388, 433, 913
BssT1I CCWWGG 1 cut(s) 123
Bst4CI ACNGT 2 cut(s) 229, 560
Bst6I CTCTTC 4 cut(s) 253, 494, 525, 912
BstAUI TGTACA 1 cut(s) 1025
BstBI TTCGAA 1 cut(s) 47
BstC8I GCNNGC 1 cut(s) 580
BstDEI CTNAG 5 cut(s) 313, 779, 828, 1082, 1098
BstF5I GGATG 5 cut(s) 749, 925, 968, 1060, 1063
BstKTI GATC 3 cut(s) 391, 436, 916
BstMBI GATC 3 cut(s) 388, 433, 913
BstMWI GCNNNNNNNGC 2 cut(s) 230, 551
BstNSI RCATGY 1 cut(s) 1026
BstSCI CCNGG 2 cut(s) 166, 684
BstSFI CTRYAG 3 cut(s) 141, 228, 377
BstV1I GCAGC 6 cut(s) 127, 131, 142, 637, 746, 824
BtsCI GGATG 5 cut(s) 749, 925, 968, 1060, 1063
BtsI GCAGTG 1 cut(s) 744
BtsIMutI CAGTG 1 cut(s) 744
BveI ACCTGC 2 cut(s) 145, 384
Cac8I GCNNGC 1 cut(s) 580
CseI GACGC 1 cut(s) 402
Csp6I GTAC 6 cut(s) 10, 68, 499, 729, 972, 1026
CviAII CATG 4 cut(s) 18, 667, 816, 1023
CviQI GTAC 6 cut(s) 10, 68, 499, 729, 972, 1026
DdeI CTNAG 5 cut(s) 313, 779, 828, 1082, 1098
DpnI GATC 3 cut(s) 390, 435, 915
DpnII GATC 3 cut(s) 388, 433, 913
Eam1104I CTCTTC 4 cut(s) 253, 494, 525, 912
EarI CTCTTC 4 cut(s) 253, 494, 525, 912
Ecl136II GAGCTC 1 cut(s) 1079
Eco130I CCWWGG 1 cut(s) 123
Eco24I GRGCYC 2 cut(s) 386, 1081
Eco32I GATATC 1 cut(s) 895
Eco53kI GAGCTC 1 cut(s) 1079
Eco88I CYCGRG 1 cut(s) 701
EcoICRI GAGCTC 1 cut(s) 1079
EcoRI GAATTC 1 cut(s) 1007
EcoRV GATATC 1 cut(s) 895
EcoT14I CCWWGG 1 cut(s) 123
EcoT22I ATGCAT 1 cut(s) 1036
EcoT38I GRGCYC 2 cut(s) 386, 1081
ErhI CCWWGG 1 cut(s) 123
FaeI CATG 4 cut(s) 21, 670, 819, 1026
FalI AAGNNNNNCTT 2 cut(s) 869, 901
FaqI GGGAC 1 cut(s) 166
FatI CATG 4 cut(s) 17, 666, 815, 1022
FauI CCCGC 1 cut(s) 255
FauNDI CATATG 1 cut(s) 646
Fnu4HI GCNGC 6 cut(s) 120, 131, 141, 651, 735, 813
FokI GGATG 5 cut(s) 756, 912, 975, 1050, 1067
FriOI GRGCYC 2 cut(s) 386, 1081
Fsp4HI GCNGC 6 cut(s) 120, 131, 141, 651, 735, 813
FspBI CTAG 4 cut(s) 65, 618, 845, 881
GluI GCNGC 6 cut(s) 120, 131, 141, 651, 735, 813
HapII CCGG 2 cut(s) 167, 685
HgaI GACGC 1 cut(s) 402
Hin1II CATG 4 cut(s) 21, 670, 819, 1026
HindIII AAGCTT 1 cut(s) 623
HinfI GANTC 6 cut(s) 25, 188, 339, 942, 1086, 1102
HpaII CCGG 2 cut(s) 167, 685
Hpy166II GTNNAC 1 cut(s) 1020
Hpy188I TCNGA 4 cut(s) 316, 841, 1085, 1101
Hpy188III TCNNGA 4 cut(s) 197, 365, 911, 939
Hpy8I GTNNAC 1 cut(s) 1020
HpyAV CCTTC 2 cut(s) 323, 651
HpyCH4III ACNGT 2 cut(s) 229, 560
HpyCH4IV ACGT 1 cut(s) 155
HpyF10VI GCNNNNNNNGC 2 cut(s) 230, 551
HpyF3I CTNAG 5 cut(s) 313, 779, 828, 1082, 1098
HpySE526I ACGT 1 cut(s) 155
Hsp92II CATG 4 cut(s) 21, 670, 819, 1026
Kzo9I GATC 3 cut(s) 388, 433, 913
LmnI GCTCC 3 cut(s) 127, 752, 793
Lsp1109I GCAGC 6 cut(s) 127, 131, 142, 637, 746, 824
LweI GCATC 4 cut(s) 734, 1021, 1043, 1045
MaeI CTAG 4 cut(s) 65, 618, 845, 881
MaeII ACGT 1 cut(s) 155
MaeIII GTNAC 1 cut(s) 1001
MalI GATC 3 cut(s) 390, 435, 915
MboI GATC 3 cut(s) 388, 433, 913
MboII GAAGA 6 cut(s) 270, 300, 481, 542, 818, 899
MhlI GDGCHC 3 cut(s) 312, 386, 1081
MnlI CCTC 9 cut(s) 266, 447, 692, 710, 761, 764, 915, 939, 1055
Mph1103I ATGCAT 1 cut(s) 1036
MseI TTAA 2 cut(s) 158, 1107
MspI CCGG 2 cut(s) 167, 685
MspR9I CCNGG 2 cut(s) 168, 686
MwoI GCNNNNNNNGC 2 cut(s) 230, 551
NciI CCSGG 2 cut(s) 168, 686
NdeI CATATG 1 cut(s) 646
NdeII GATC 3 cut(s) 388, 433, 913
NlaIII CATG 4 cut(s) 21, 670, 819, 1026
NsiI ATGCAT 1 cut(s) 1036
NspI RCATGY 1 cut(s) 1026
NspV TTCGAA 1 cut(s) 47
PciI ACATGT 1 cut(s) 1022
PfeI GAWTC 6 cut(s) 25, 188, 339, 942, 1086, 1102
PfoI TCCNGGA 1 cut(s) 684
PkrI GCNGC 6 cut(s) 121, 132, 142, 652, 736, 814
PscI ACATGT 1 cut(s) 1022
Psp124BI GAGCTC 1 cut(s) 1081
PstI CTGCAG 2 cut(s) 145, 381
RsaI GTAC 6 cut(s) 11, 69, 500, 730, 973, 1027
RsaNI GTAC 6 cut(s) 10, 68, 499, 729, 972, 1026
SacI GAGCTC 1 cut(s) 1081
SaqAI TTAA 2 cut(s) 158, 1107
SatI GCNGC 6 cut(s) 120, 131, 141, 651, 735, 813
Sau3AI GATC 3 cut(s) 388, 433, 913
ScaI AGTACT 2 cut(s) 11, 69
ScrFI CCNGG 2 cut(s) 168, 686
SduI GDGCHC 3 cut(s) 312, 386, 1081
SfaNI GCATC 4 cut(s) 734, 1021, 1043, 1045
SfcI CTRYAG 3 cut(s) 141, 228, 377
SfuI TTCGAA 1 cut(s) 47
SpeI ACTAGT 1 cut(s) 64
SsiI CCGC 2 cut(s) 248, 992
SspMI CTAG 4 cut(s) 65, 618, 845, 881
SstI GAGCTC 1 cut(s) 1081
StyD4I CCNGG 2 cut(s) 166, 684
StyI CCWWGG 1 cut(s) 123
TaaI ACNGT 2 cut(s) 229, 560
TaiI ACGT 1 cut(s) 158
TaqI TCGA 1 cut(s) 47
TatI WGTACW 5 cut(s) 9, 67, 498, 728, 1025
TfiI GAWTC 6 cut(s) 25, 188, 339, 942, 1086, 1102
Tru1I TTAA 2 cut(s) 158, 1107
Tru9I TTAA 2 cut(s) 158, 1107
TscAI CASTG 1 cut(s) 744
TseI GCWGC 6 cut(s) 119, 130, 140, 650, 734, 812
TspDTI ATGAA 3 cut(s) 6, 633, 1052
TspGWI ACGGA 1 cut(s) 1005
TspRI CASTG 1 cut(s) 744
XapI RAATTY 3 cut(s) 51, 161, 1007
XceI RCATGY 1 cut(s) 1026
XspI CTAG 4 cut(s) 65, 618, 845, 881
ZrmI AGTACT 2 cut(s) 11, 69
Zsp2I ATGCAT 1 cut(s) 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.