pycom15g21320

GDSL esterase lipase EXL3-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
15328008 .. 15328595
588 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g21320.2

Sequence Viewer

Length: 498 bp
ATGAAGTTTCTCTCCCAAAAACTTCTTCCCTCGTCATCGGAATTTTCTCAAAAAAAAAAATTTCTGATCGTTATAGTTTTATTCTTCTACCACAATGTGGCTGCTGTAAAACTACCGAACAACGAAAAGATTCCTGCAGTGATTGTTTTCGGAGATTCAGTAGTGGATTCTGGAAACAACAACAATATTAGCACTGTAGTCAAATGTAATTTCCCACCATATGGGAGGGACTTTGTAGGACAAAGACCTACTGGAAGATTTAGCAATGGCAGAGTCCCCTCAGACTTGATAGCTGAATCAGTTGGAGTAAAGAAGATATTGCCAGCTTATCTGGATCCAAATCTGAAGATTCACGACTTACTTACGGGTGTAACTTTTGCCTCAGGTGGCTCAGGATATGATCCTCTCACTCCTAAAATAGTGGTAAATACAAACATATATATATATATATATATATATATATATATATTGTGGGTCGCGCCTCACCGCAGGCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

166

Amino Acids

18.44

Weight (kDa)

9.62

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000393)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G20120 AT1G20132
fragaria_vesca FvH4_1g11330 FvH4_1g11340 FvH4_1g11341 FvH4_1g11342 FvH4_1g11390 FvH4_1g11390 FvH4_2g38111 FvH4_2g38111 FvH4_2g38111 FvH4_5g34670
malus_domestica MD02G1126900.v1.1 MD02G1127000.v1.1 MD02G1127100.v1.1 MD15G1008700.v1.1 MD15G1241600.v1.1 MD15G1241700.v1.1
prunus_persica Prupe.1G361600_v2.0.a1 Prupe.1G361700_v2.0.a1 Prupe.7G172300_v2.0.a1
pyrus_communis pycom02g09900 pycom02g09910 pycom02g09920 pycom15g00720 pycom15g21320
rosa_chinensis RchiOBHm_Chr2g0098851 RchiOBHm_Chr2g0098861 RchiOBHm_Chr2g0098871 RchiOBHm_Chr2g0098881 RchiOBHm_Chr2g0098921 RchiOBHm_Chr2g0130201 RchiOBHm_Chr6g0303431 RchiOBHm_Chr7g0235831
rosa_laevigata RLG00000001135 RLG00000011086 RLG00000016830 RLG00000016834 RLG00000019130
rosa_multiflora Rmu_co8160810.1_g000001 Rmu_co8282213.1_g000001 Rmu_co8476509.1_g000001 Rmu_sc0007686.1_g000001 Rmu_sc0008564.1_g000006 Rmu_sc0008564.1_g000009 Rmu_sc0008564.1_g000011 Rmu_sc0008564.1_g000016 Rmu_sc0008940.1_g000006 Rmu_sc0008941.1_g000009 Rmu_sc0010460.1_g000019 Rmu_sc0027015.1_g000001 Rmu_sc0027115.1_g000001 Rmu_sc0039572.1_g000001 Rmu_ssc0000114.1_g000053
rosa_roxburghii Rroxscaffold_2G00143590 Rroxscaffold_2G00143660 Rroxscaffold_2G00143670 Rroxscaffold_2G00143680 Rroxscaffold_7G00164780
rosa_rugosa Rorug02G0075000 Rorug02G0075100 Rorug02G0075200 Rorug02G0291100 Rorug02G0291200 Rorug02G0291300
rosa_samantha Rh2AG123000 Rh2AG123100 Rh2AG123200 Rh2AG123400 Rh2AG123800 Rh2AG123900 Rh2AG124200 Rh2AG124400 Rh2AG343000 Rh2BG126600 Rh2BG126700 Rh2BG126900 Rh2BG127100 Rh2BG127400 Rh2BG127600 Rh2BG350800 Rh2CG127600 Rh2CG127700 Rh2CG127800 Rh2CG128000 Rh2CG128300 Rh2CG128500 Rh2CG330100 Rh6AG435600 Rh6CG447600 Rh6DG434300 Rh7AG447900 Rh7BG420100 Rh7CG468400
rosa_wichuraiana Rw0G004290 Rw2G009510 Rw2G009550 Rw2G027630 Rw2G027650 Rw6G037700 Rw7G037230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 97, 221
AccII CGCG 1 cut(s) 479
AciI CCGC 1 cut(s) 487
AclWI GGATC 3 cut(s) 329, 342, 395
AcsI RAATTY 2 cut(s) 41, 59
AcuI CTGAAG 1 cut(s) 365
AdeI CACNNNGTG 1 cut(s) 97
AfiI CCNNNNNNNGG 2 cut(s) 97, 221
AjuI GAANNNNNNNTTGG 2 cut(s) 9, 41
AluBI AGCT 2 cut(s) 293, 326
AluI AGCT 2 cut(s) 293, 326
AlwI GGATC 3 cut(s) 329, 342, 395
AlwNI CAGNNNCTG 1 cut(s) 495
ApeKI GCWGC 1 cut(s) 101
ApoI RAATTY 2 cut(s) 41, 59
Asp700I GAANNNNTTC 1 cut(s) 129
AspLEI GCGC 1 cut(s) 481
AsuHPI GGTGA 1 cut(s) 476
AxyI CCTNAGG 1 cut(s) 382
BamHI GGATCC 1 cut(s) 334
BbvI GCAGC 1 cut(s) 88
BfmI CTRYAG 2 cut(s) 135, 195
BisI GCNGC 1 cut(s) 102
BlsI GCNGC 1 cut(s) 103
BmiI GGNNCC 1 cut(s) 336
Bpu10I CCTNAGC 1 cut(s) 391
BsaBI GATNNNNATC 1 cut(s) 339
BsaXI ACNNNNNCTCC 2 cut(s) 144, 174
Bsc4I CCNNNNNNNGG 2 cut(s) 97, 221
Bse1I ACTGG 1 cut(s) 256
Bse21I CCTNAGG 1 cut(s) 382
Bse3DI GCAATG 1 cut(s) 271
Bse8I GATNNNNATC 1 cut(s) 339
BseJI GATNNNNATC 1 cut(s) 339
BseLI CCNNNNNNNGG 2 cut(s) 97, 221
BseMI GCAATG 1 cut(s) 271
BseMII CTCAG 3 cut(s) 294, 396, 405
BseNI ACTGG 1 cut(s) 256
BseXI GCAGC 1 cut(s) 88
Bsh1236I CGCG 1 cut(s) 479
BslFI GGGAC 2 cut(s) 242, 260
BslI CCNNNNNNNGG 2 cut(s) 97, 221
BsmFI GGGAC 2 cut(s) 242, 260
Bsp143I GATC 3 cut(s) 66, 334, 400
BspACI CCGC 1 cut(s) 487
BspCNI CTCAG 3 cut(s) 293, 395, 404
BspFNI CGCG 1 cut(s) 479
BspLI GGNNCC 1 cut(s) 336
BspMAI CTGCAG 1 cut(s) 139
BspPI GGATC 3 cut(s) 329, 342, 395
BsrDI GCAATG 1 cut(s) 271
BsrI ACTGG 1 cut(s) 256
BssMI GATC 3 cut(s) 66, 334, 400
Bst4CI ACNGT 1 cut(s) 196
BstC8I GCNNGC 2 cut(s) 324, 491
BstDEI CTNAG 3 cut(s) 280, 382, 391
BstFNI CGCG 1 cut(s) 479
BstHHI GCGC 1 cut(s) 481
BstKTI GATC 3 cut(s) 69, 337, 403
BstMBI GATC 3 cut(s) 66, 334, 400
BstSFI CTRYAG 2 cut(s) 135, 195
BstUI CGCG 1 cut(s) 479
BstV1I GCAGC 1 cut(s) 88
BstX2I RGATCY 1 cut(s) 334
BstYI RGATCY 1 cut(s) 334
Bsu36I CCTNAGG 1 cut(s) 382
BtsI GCAGTG 1 cut(s) 144
BtsIMutI CAGTG 3 cut(s) 144, 192, 493
Cac8I GCNNGC 2 cut(s) 324, 491
CaiI CAGNNNCTG 1 cut(s) 495
CfoI GCGC 1 cut(s) 481
CviJI RGCY 4 cut(s) 101, 293, 326, 390
CviKI_1 RGCY 4 cut(s) 101, 293, 326, 390
DdeI CTNAG 3 cut(s) 280, 382, 391
DpnI GATC 3 cut(s) 68, 336, 402
DpnII GATC 3 cut(s) 66, 334, 400
DraIII CACNNNGTG 1 cut(s) 97
Eco57I CTGAAG 1 cut(s) 365
Eco81I CCTNAGG 1 cut(s) 382
FaqI GGGAC 2 cut(s) 242, 260
FauNDI CATATG 1 cut(s) 220
Fnu4HI GCNGC 1 cut(s) 102
Fsp4HI GCNGC 1 cut(s) 102
GlaI GCGC 1 cut(s) 480
GluI GCNGC 1 cut(s) 102
HhaI GCGC 1 cut(s) 481
Hin6I GCGC 1 cut(s) 479
HinP1I GCGC 1 cut(s) 479
HinfI GANTC 6 cut(s) 130, 155, 167, 273, 296, 349
HphI GGTGA 1 cut(s) 476
Hpy188I TCNGA 5 cut(s) 40, 66, 152, 283, 345
Hpy188III TCNNGA 4 cut(s) 171, 332, 353, 393
HpyCH4III ACNGT 1 cut(s) 196
HpyCH4V TGCA 1 cut(s) 137
HpyF3I CTNAG 3 cut(s) 280, 382, 391
HspAI GCGC 1 cut(s) 479
Kzo9I GATC 3 cut(s) 66, 334, 400
LpnPI CCDG 8 cut(s) 147, 156, 237, 317, 336, 369, 378, 475
Lsp1109I GCAGC 1 cut(s) 88
MaeIII GTNAC 1 cut(s) 370
MalI GATC 3 cut(s) 68, 336, 402
MboI GATC 3 cut(s) 66, 334, 400
MboII GAAGA 5 cut(s) 17, 76, 267, 325, 358
MflI RGATCY 1 cut(s) 334
MluCI AATT 3 cut(s) 41, 59, 208
MlyI GAGTC 1 cut(s) 282
MmeI TCCRAC 1 cut(s) 283
MnlI CCTC 6 cut(s) 40, 219, 289, 391, 414, 492
MroXI GAANNNNTTC 1 cut(s) 129
MvnI CGCG 1 cut(s) 479
NdeI CATATG 1 cut(s) 220
NdeII GATC 3 cut(s) 66, 334, 400
NlaIV GGNNCC 1 cut(s) 336
PdmI GAANNNNTTC 1 cut(s) 129
PfeI GAWTC 5 cut(s) 130, 155, 167, 296, 349
PflMI CCANNNNNTGG 2 cut(s) 97, 221
PkrI GCNGC 1 cut(s) 103
PleI GAGTC 1 cut(s) 281
PpsI GAGTC 1 cut(s) 281
PspN4I GGNNCC 1 cut(s) 336
PstI CTGCAG 1 cut(s) 139
PstNI CAGNNNCTG 1 cut(s) 495
PsuI RGATCY 1 cut(s) 334
SatI GCNGC 1 cut(s) 102
Sau3AI GATC 3 cut(s) 66, 334, 400
SchI GAGTC 1 cut(s) 282
SetI ASST 4 cut(s) 250, 295, 328, 388
SfcI CTRYAG 2 cut(s) 135, 195
Sse9I AATT 3 cut(s) 41, 59, 208
SsiI CCGC 1 cut(s) 487
SspI AATATT 1 cut(s) 187
TaaI ACNGT 1 cut(s) 196
TasI AATT 3 cut(s) 41, 59, 208
TfiI GAWTC 5 cut(s) 130, 155, 167, 296, 349
TscAI CASTG 2 cut(s) 144, 199
TseI GCWGC 1 cut(s) 101
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 2 cut(s) 144, 199
Van91I CCANNNNNTGG 2 cut(s) 97, 221
XapI RAATTY 2 cut(s) 41, 59
XmnI GAANNNNTTC 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.