Prupe.5G145900_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000526
Physical Location & Seq
Forward (+)
13422786 .. 13428395
5610 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G145900.1

Sequence Viewer

Length: 5076 bp
ATGGCGACACCAAAAGAGCACGTAGAAGAGATACGAAAGAAAAAGTTCTCCATAGGAGCAGAAGCAATCAACCCTTTGACTGAGGATCTTCACCAGGCTGTCAAGAATCTCTCTGCTGAACTCTATGCCAAAGATATTCATTTCTTAATGGAACTCATCCAGAATGCAGAAGATAATGAGTACGCGGAGGTGGTTGATCCATCACTTGAGTTCCTCATAACGTCTCGGGATATAACGGGCACAGGGGCTCCTGCCACATTGCTGGTTTTCAACAATGAGAAAGGATTTTCTCATAAAAACATAGAATCCATTTGCAGTGTTGGACGGTCCACCAAAAAAGGCAACAGGAAGCGTGGCTATATTGGGGAGAAAGGTATTAATGGTTATCAAATAAGGTTTAGTGAAGATCCTTGTGTGCATTGCAATCTCGGGTACATGGTTCCTGAATGGGTTGATACAAACCCTAATTTGTCTGACATAAAACAGTTATATGGTTCTGCTTCTGCCCTTCCAACAACAACATTGATCTTACCTCTAAAGCCCGACAAGGTCCAAGCCGTGCAGCAGCAGCTGTCAATCATACACCCTGAGGTTCTGTTGTTTCTTTCAAAGATTAAGAGGCTCTCAGTCAGGGAAGATAATGAGGATCCAAGTCTCAGCACTGTTTGTGCTATTGAGATAGTGAGTGAGACTGACTTTGTGACGAGGAAGAACATCGATGCGCAGTCCTACACCCTCCATCTCTCTGCAGAAGAAAGTGGTAAGGTGTTTGAAAATGAATGTGGCTATTATATGTGGAAGCAGAAGTTTCCTGTCAAGCAGGAATGCAGAGTTGAGAGGAGAATGGAGGTGGATGAGTGGGTGATCACCCTTGCATTTCCAATAGGAGAACGCCTTCGCAGAGGAATGAACACTTCTTCTGGGATCTATGCATTCCTTCCAACTGAGATGGTGACAAATTTTCCCTTCATAATTCAAGCTGATTTTCTTCTTGCATCATCAAGGGAAACAATTCTCCTGGACAACAAATGGAATAAGGGTATTCTTGATTGCGTGCCCACTGCATTTGTTAATGCATTTATCTCGCTTGTTAGATCTATTGTAGATGCTCCTGTGTCTAGTTTGCCTCATATGTTCAAGTTCCTGCCTGTACAGAGCTCTTCCTATGAAGAATTGAATGTTGTCAGGGAGTCTATAAAGGCAAAAATTGTTGAGGAAAGCATTGTCCCTAGTGAGCCCCACAAGGAGCAGAAGTTCTTTTACAAACCTCGTGAAGTGGGTAGGTTGATGCCTGCTTTTTGGAATATTTTGAGGAAGGCGGAGGATCAAGGGGTAAGTTTGATTAATCTCTCATCTCATGGAAGATATGTTCTGTCGTATTCATTTGACAAGGTCGAGTATGATCACATACTGAGTTTCCTGGGAGTTGAACCAGTAGACAATGAATGGTATGCTAAATGCATCCAGGGTACTTCCAATCTTGTAACTGGGGTGTCGGATGTTGTCTACTTGGAGCTTCTTCTGTTTATTGCTGATAATTGGGGGTCCAAATTTTGCCGCTCTAGCATCAAGAACATATCCTTAATTAAATGTGTGGGGAATGGAATTAAATCTTTGTGCAGCATAAGTGCAATCCAGAATAGTCGAAGTAAAGTTTGCCTATCCATTAATTCTTGTCATGTCTCATGGCTGATTGATTGGAACTGCGAGTTTATATCCGTTGCTAGCTTTCTTTTTATGCCAAAAATCACACAGGAAGCTATCTGGTCGTGTTCTCGGAAGGAGACATTGGTGAAATGGCTTTCGGAGCAAGTCAAGGTCTGTTCTGTAAGCCTATATGAATACGCAGTTGATCTCTTTGACAAGTCACTTAATGAGAGGAAGCTTGTTATTGCAATTGCCCACTTTTTGTATCAGTCATTGTGCAAAAGTTACATCTCAGATCGAGAAGTTGATAAATTATGCAGAATTATGCCTCTGGTGGATAAGTATGGGAGCATCATCAAATATAGGGCTAGGGTTATTGTCCCTGCCAATGGAAGCAAATGGGCGGGGTTAACTGATTCTAATCTGTGGAGAAAAGAAGGCTATGTTGAGTTAAGAGAAGATTATTTGGATTCAGGTCGTTTTGCTGGTAACATTACACCACAGAAGAAGCTCCTTGAGTTTCTTAAAGTTCAAGCTGGAGCTTTGGATGTCCCTTATATATCTGCCCCAAGTGATGGTATATCAGCATTATCTGCTCAACTTACTAAGCAAAATACATTTTTGCTTTTGGACTGGATTCATCACCTCATGTATCAAGGTGTTCGAATCCCACAGAAGTTCTTGACGTGCATAAAAGATGGGGGCTGGCTGAAAGTTACTTTGAATGGCTCTTCTGGTGTCAGGCCACCTTCACAGTCATTCCTACTTAAGTCATCATGGGGAAACATTTTGCAGGATGGCTCCGTTTTTGTTGATATCCCATTGATTGATCAGAGCTATTATGGTGAGAGAATTAATAGTTACAAGGACGAGCTGAAAAAGATTGGAGTCAGGTTTGAGTATGCTGAAGCATGTGAATATATGGGGAAGCATCTAATGTCTCTTGCTTCGTCTTCCACTCTAACCCGAGACAATGTACTTTCTGTGCTTCGTTTCATCAAGTTTTTAAGAGACAAGTATCTTTCCCCAGACGATTTTATCTGCAGTATTAAAGAAGGCCAGTGGCTTAAAACATCCCTTGGCTTCAGGTCTCCGGTAGGATCAGTCTTGTCTGATAAAGAGTGGGAAATTGCATCAAAAGTAAGTGACATTCCCTTTATCGATAAAGCATTCTATGGTGGTGAAATATGTAAATTCAAAAACGAACTTGAGTTGCTTGGTGTGGTTGTCTCCATCAGCAAAAGTTACCAGCTTATAATTGACAACCTGAAATCACCTTCTCGCTTAACTTCTCTGCCAGCTGAGGCTGTTCTATTGATGCTTGAATGTATGCAGCTTTCCAGTTCATCTGAGAAACTTGTCAGAGCATTGAAAGGAATCAAGTGCCTGAAGACAACAGTTGGTTACAAGTCTCCAAATGAATGTCTCCTGCCCCAAGTTGAATGGGGCTGCATTCTGAAGGTATTCAGTGGTCTCCCATTGATTGATCACAATTTCTATGGAAAAGGAATACATTCCTACAGAAATGAGTTGAAGAAAACAGGGGTGGTTGTTGATTTTGATGAGGCTGCAAAAGTGTTTGCTCGCTATTTCAGGCAGTATGCATCATCGGCTTCCATCACCAAAGAAAATGTAGAAGCATTTCTGTCCTGTTACAGAAAGCTGGAGGGAACTCCTTTTAAATTTCCTGCAGATCTTAAGAGCTGCATTTGCAAAGAAAAGTGGCTGCGTACTCGCCTTGGTGATTATAGATCTCCAAGAGAGTGCATTCTGTTTTGTTCTGATTGGGAATCTATCTCTCCCATATGCCTTCTCCCTTTTATTGACGATTCTGACACTTGTTATGGCAAGAACATTCATGAATATAAGCAAGAGCTGAAGAGCTTGGGGGTTGTTGTGGAATTCAAGGATGGGGTCAAGTTTGTGCCTTCTTGTCTTTATCTTCCCCAGAATCCGAGCAGCATTTCTCAAGAAAATGCACTTGCTTTGCTGGACTGCATACATATTTTATTGGAGGAGAAAGATTACTCCTTTCCTGATGTGTTCACGAAGAAAGTTTCTCAGGCATGGCTGAAGGCTCATGATGGTTACGAGCCTCCGAGCAAGTGCTTGTTGTTTGATTCCGAGTTTGGTAAGTATCTAAAGCAGACTGATGGGCCTTTCATTGATGAAGAGTTTTATGGTTCTAAAATTACAACATACAGAAAAGAGCTCTCTGAAATAGGGGTGATTGTTGAAGTGGACAAAGGATGTCCTTTGCTTGCCAGCCAGCTTGCTCTTCGTGATGAATTGTCCACTTTTGTTCGAGTATATAGTTACTTGAGTGAGTTTAAGTGGAAGCCGGATAGCAAGGCTGACAAAAGGATCTGGTTTCCAAAGGGAAATCAGAATGGAGAGTGGGTTAATCCAGAAGAGTGTGTTATATATGACAAGGATGAGCTGTTTGGCTTGCAGTTGACTGTTCTGGAGAAATACTTTGAGCATAACCTATTGGTGTTCTTCTCCCGTGCTTATGGGGTAAAGTCCTGTCCTTCAATTGAAGACTACTGCAGGCTCTGGAAGGTGTGGGAAAATTTTGAAGGTGGATTGTTGCATGATCAATGTTGCAAATTCTGGGGGTATGTTTCAAAGCACTGGAATTCAAAAACGGAGAAAACTCTTGCTGAGGCTTTGGTGAAAGTACCTGTTAATTCAGGCTCCGCTGGAATCTTGTTGTGCAACAAGCAAGATGTTTTCATTGCTGATGACCTTCAGCTGCAGTATCTTTTTGAACAGTCTTCTCACCAAGTTTTTGTTTGGTACCCTCAGCCTAGCCTGGCTTCCTTGCCTAGGACTAAGTTGCTTGAAATTTACAGGGAAATTGGTGTTCGTACTATCTCTGAATCAGTGCAGAAGGAAGAACTATTCCTAGCAAATGATGTTGAACTACAGTTAATTCCAACAGAGAAATTGATCGGGAAAGCACTGCTCAGGCTGATACTTGGTTTTCTAGCTTGTCCTCCCATTAAAATGGAAGCAGAGAAAAGGCAAAAAGCTGTCCAAGGTCTTGCCAATGTTGCTGTTGTGGAGACATCTGAACCAATCACTGTAAGCTATGATCTACCATTATCTTCTGGGAAAATTTTGAATGTGAGAGGTAGCCGAAAGGTACGATGGGATAGAGAAGATTCCAAAATTTTCACCGAGAAGATGGACAGATCTGGAGGATATAAGAGCATCATTGAGTTTGCTACATATTTCTCTGAAGCAATTTCTGAGTTTGTACTGTGGGAGATCCCTGATCATATACATGCACTTTCTGAGCTGATCAAGTTGGCCTTTGTGCTAGACCTTGATGAGGAAGCCGTTACTTTCTTGATGAAGTCCAAGAATTTGCAGATCTTCGTGGAGGATGAGGAGTTTCTGAATTCTGCCTACCGTTCTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1692

Amino Acids

192.29

Weight (kDa)

6.11

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000526)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28020 AT3G48770 AT3G48770
fragaria_vesca FvH4_5g09020 FvH4_5g09020
malus_domestica MD06G1092400.v1.1 MD06G1134600.v1.1 MD06G1134700.v1.1 MD06G1134800.v1.1 MD06G1135200.v1.1 MD06G1135400.v1.1 MD06G1135500.v1.1 MD08G1137600.v1.1 MD15G1395100.v1.1
prunus_persica Prupe.5G145400_v2.0.a1 Prupe.5G145400_v2.0.a1 Prupe.5G145400_v2.0.a1 Prupe.5G145600_v2.0.a1 Prupe.5G145800_v2.0.a1 Prupe.5G145900_v2.0.a1
pyrus_communis pycom06g12550 pycom06g12570 pycom06g12580 pycom06g12590 pycom06g12610 pycom06g12630 pycom06g12640 pycom06g12650 pycom08g06280
rosa_chinensis RchiOBHm_Chr6g0249321 RchiOBHm_Chr6g0275111 RchiOBHm_Chr7g0189191 RchiOBHm_Chr7g0189261
rosa_laevigata RLG00000004622 RLG00000004623 RLG00000008237 RLG00000008238 RLG00000023303 RLG00000035187
rosa_multiflora Rmu_co8294311.1_g000001 Rmu_co8389833.1_g000001 Rmu_sc0001044.1_g000004 Rmu_sc0001329.1_g000011 Rmu_sc0006012.1_g000010 Rmu_sc0007286.1_g000032 Rmu_sc0009360.1_g000016 Rmu_sc0011817.1_g000001 Rmu_sc0015050.1_g000001
rosa_roxburghii Rroxscaffold_1G00064000 Rroxscaffold_3G00265460 Rroxscaffold_3G00265580 Rroxscaffold_3G00265640 Rroxscaffold_3G00265690 Rroxscaffold_3G00265700 Rroxscaffold_7G00193620 Rroxscaffold_7G00204550 Rroxscaffold_7G00217350
rosa_rugosa Rorug01G0465500 Rorug06G0088500 Rorug06G0496700 Rorug06G0496700
rosa_samantha Rh1AG064800 Rh2BG015100 Rh2BG493500 Rh2DG017300 Rh2DG502500 Rh4BG208500 Rh5BG528500 Rh5CG552900 Rh6CG207800 Rh6DG197900 Rh6DG198000 Rh7AG101300 Rh7AG101400 Rh7AG101600 Rh7BG104100 Rh7BG104200 Rh7CG105600 Rh7CG105700 Rh7DG103200 Rh7DG103400
rosa_wichuraiana Rw1G007300 Rw5G034670 Rw7G008750 Rw7G008780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2903
Acc16I TGCGCA 1 cut(s) 723
Acc65I GGTACC 1 cut(s) 4446
AccB1I GGYRCC 1 cut(s) 4446
AccB7I CCANNNNNTGG 1 cut(s) 2222
AccBSI CCGCTC 1 cut(s) 1560
AccI GTMKAC 2 cut(s) 1437, 1506
AccII CGCG 1 cut(s) 185
AciI CCGC 5 cut(s) 185, 1319, 1558, 2051, 4347
AcuI CTGAAG 8 cut(s) 2574, 2716, 3056, 3125, 3545, 3740, 4382, 4911
AfiI CCNNNNNNNGG 4 cut(s) 2036, 2222, 4476, 4984
AflII CTTAAG 2 cut(s) 2414, 3344
AjiI CACGTC 1 cut(s) 2334
AjnI CCWGG 5 cut(s) 93, 1017, 1419, 1464, 4461
AjuI GAANNNNNNNTTGG 2 cut(s) 1772, 1804
AloI GAACNNNNNNTCC 4 cut(s) 1238, 1270, 1353, 1385
Alw21I GWGCWC 3 cut(s) 21, 1160, 3861
AlwNI CAGNNNCTG 2 cut(s) 571, 4203
Ama87I CYCGRG 3 cut(s) 225, 428, 2613
AoxI GGCC 4 cut(s) 2390, 2704, 3803, 4962
AseI ATTAAT 4 cut(s) 378, 1344, 1668, 2502
Asp700I GAANNNNTTC 6 cut(s) 44, 894, 1011, 3110, 3160, 3288
Asp718I GGTACC 1 cut(s) 4446
AspA2I CCTAGG 1 cut(s) 4475
AspLEI GCGC 1 cut(s) 724
AspS9I GGNCC 4 cut(s) 327, 550, 1545, 3803
AsuII TTCGAA 1 cut(s) 2311
AsuNHI GCTAGC 1 cut(s) 1724
AvaI CYCGRG 3 cut(s) 225, 428, 2613
AvaII GGWCC 3 cut(s) 327, 550, 1545
AvrII CCTAGG 1 cut(s) 4475
AxyI CCTNAGG 1 cut(s) 588
BaeGI GKGCMC 2 cut(s) 242, 1059
BamHI GGATCC 1 cut(s) 646
BanI GGYRCC 1 cut(s) 4446
BanII GRGCYC 4 cut(s) 250, 1160, 1239, 3861
BarI GAAGNNNNNNTAC 2 cut(s) 1244, 1276
BauI CACGAG 1 cut(s) 1269
BbsI GAAGAC 4 cut(s) 2592, 3044, 4194, 4416
Bbv12I GWGCWC 3 cut(s) 21, 1160, 3861
BbvCI CCTCAGC 3 cut(s) 2949, 4311, 4452
BceAI ACGGC 2 cut(s) 542, 4976
BcgI CGANNNNNNTGC 2 cut(s) 1065, 1099
BciT130I CCWGG 5 cut(s) 95, 1019, 1421, 1466, 4463
BclI TGATCA 7 cut(s) 864, 1402, 2476, 3133, 4243, 4927, 4953
BfmI CTRYAG 7 cut(s) 747, 2689, 3166, 3336, 4195, 4403, 4574
BfrI CTTAAG 2 cut(s) 2414, 3344
BglII AGATCT 5 cut(s) 1094, 3340, 3398, 4844, 5025
BlnI CCTAGG 1 cut(s) 4475
Bme1390I CCNGG 5 cut(s) 95, 1019, 1421, 1466, 4463
Bme18I GGWCC 3 cut(s) 327, 550, 1545
BmeT110I CYCGRG 3 cut(s) 225, 428, 2613
BmgBI CACGTC 1 cut(s) 2334
BmgT120I GGNCC 4 cut(s) 327, 550, 1545, 3803
BmiI GGNNCC 7 cut(s) 249, 441, 648, 1546, 2449, 4345, 4448
BmrFI CCNGG 5 cut(s) 95, 1019, 1421, 1466, 4463
BmrI ACTGGG 1 cut(s) 1497
BmtI GCTAGC 1 cut(s) 1728
BmuI ACTGGG 1 cut(s) 1497
BpiI GAAGAC 4 cut(s) 2592, 3044, 4194, 4416
BpmI CTGGAG 4 cut(s) 2205, 3332, 4133, 4869
Bpu10I CCTNAGC 4 cut(s) 2949, 4311, 4452, 4616
Bpu14I TTCGAA 1 cut(s) 2311
BpuEI CTTGAG 5 cut(s) 227, 2183, 2876, 3600, 3988
Bsa29I ATCGAT 2 cut(s) 717, 2808
BsaAI YACGTR 1 cut(s) 22
BsaBI GATNNNNATC 1 cut(s) 2067
BsaI GGTCTC 2 cut(s) 2742, 3125
BsaJI CCNNGG 6 cut(s) 1420, 1465, 2725, 3385, 4475, 4687
BsaWI WCCGGW 1 cut(s) 2740
BsaXI ACNNNNNCTCC 6 cut(s) 232, 262, 1238, 1268, 4032, 4062
Bsc4I CCNNNNNNNGG 4 cut(s) 2036, 2222, 4476, 4984
Bse1I ACTGG 6 cut(s) 1433, 1492, 2285, 2707, 2988, 4286
Bse21I CCTNAGG 1 cut(s) 588
Bse3DI GCAATG 3 cut(s) 257, 418, 4383
Bse8I GATNNNNATC 1 cut(s) 2067
BseBI CCWGG 5 cut(s) 95, 1019, 1421, 1466, 4463
BseCI ATCGAT 2 cut(s) 717, 2808
BseDI CCNNGG 6 cut(s) 1420, 1465, 2725, 3385, 4475, 4687
BseJI GATNNNNATC 1 cut(s) 2067
BseLI CCNNNNNNNGG 4 cut(s) 2036, 2222, 4476, 4984
BseMI GCAATG 3 cut(s) 257, 418, 4383
BseNI ACTGG 6 cut(s) 1433, 1492, 2285, 2707, 2988, 4286
BseRI GAGGAG 3 cut(s) 853, 3677, 5057
BseSI GKGCMC 2 cut(s) 242, 1059
BsgI GTGCAG 3 cut(s) 581, 1639, 4556
Bsh1236I CGCG 1 cut(s) 185
BshFI GGCC 4 cut(s) 2392, 2706, 3805, 4964
BshNI GGYRCC 1 cut(s) 4446
BshVI ATCGAT 2 cut(s) 717, 2808
BsiHKAI GWGCWC 3 cut(s) 21, 1160, 3861
BsiHKCI CYCGRG 3 cut(s) 225, 428, 2613
BsiSI CCGG 2 cut(s) 2741, 3989
BslFI GGGAC 3 cut(s) 1211, 2012, 2183
BslI CCNNNNNNNGG 4 cut(s) 2036, 2222, 4476, 4984
BsmBI CGTCTC 1 cut(s) 228
BsmFI GGGAC 3 cut(s) 1211, 2012, 2183
BsmI GAATGC 6 cut(s) 169, 830, 932, 2816, 3099, 3414
BsnI GGCC 4 cut(s) 2392, 2706, 3805, 4964
Bso31I GGTCTC 2 cut(s) 2742, 3125
BsoBI CYCGRG 3 cut(s) 225, 428, 2613
Bsp119I TTCGAA 1 cut(s) 2311
Bsp1286I GDGCHC 7 cut(s) 21, 242, 250, 1059, 1160, 1239, 3861
Bsp1407I TGTACA 1 cut(s) 1150
BspACI CCGC 5 cut(s) 185, 1319, 1558, 2051, 4347
BspANI GGCC 4 cut(s) 2392, 2706, 3805, 4964
BspDI ATCGAT 2 cut(s) 717, 2808
BspFNI CGCG 1 cut(s) 185
BspHI TCATGA 2 cut(s) 3505, 3727
BspLI GGNNCC 7 cut(s) 249, 441, 648, 1546, 2449, 4345, 4448
BspMAI CTGCAG 5 cut(s) 751, 2693, 3340, 4199, 4407
BspOI GCTAGC 1 cut(s) 1728
BspQI GCTCTTC 4 cut(s) 1165, 2383, 3521, 3930
BspT104I TTCGAA 1 cut(s) 2311
BspT107I GGYRCC 1 cut(s) 4446
BspTI CTTAAG 2 cut(s) 2414, 3344
BspTNI GGTCTC 2 cut(s) 2742, 3125
BsrBI CCGCTC 1 cut(s) 1560
BsrDI GCAATG 3 cut(s) 257, 418, 4383
BsrGI TGTACA 1 cut(s) 1150
BsrI ACTGG 6 cut(s) 1433, 1492, 2285, 2707, 2988, 4286
BssECI CCNNGG 6 cut(s) 1420, 1465, 2725, 3385, 4475, 4687
BssSI CACGAG 1 cut(s) 1269
BssT1I CCWWGG 4 cut(s) 2725, 3385, 4475, 4687
Bst2BI CACGAG 1 cut(s) 1269
Bst2UI CCWGG 5 cut(s) 95, 1019, 1421, 1466, 4463
Bst6I CTCTTC 7 cut(s) 21, 1165, 2383, 3521, 3813, 3930, 4053
BstAFI CTTAAG 2 cut(s) 2414, 3344
BstAPI GCANNNNNTGC 1 cut(s) 2240
BstAUI TGTACA 1 cut(s) 1150
BstBAI YACGTR 1 cut(s) 22
BstBI TTCGAA 1 cut(s) 2311
BstENI CCTNNNNNAGG 2 cut(s) 4474, 4982
BstFNI CGCG 1 cut(s) 185
BstHHI GCGC 1 cut(s) 724
BstMWI GCNNNNNNNGC 7 cut(s) 568, 1563, 1807, 2240, 3257, 3357, 4703
BstNI CCWGG 5 cut(s) 95, 1019, 1421, 1466, 4463
BstNSI RCATGY 2 cut(s) 2562, 4940
BstSCI CCNGG 5 cut(s) 93, 1017, 1419, 1464, 4461
BstSFI CTRYAG 7 cut(s) 747, 2689, 3166, 3336, 4195, 4403, 4574
BstSLI GKGCMC 2 cut(s) 242, 1059
BstUI CGCG 1 cut(s) 185
BstV2I GAAGAC 4 cut(s) 2592, 3044, 4194, 4416
BstXI CCANNNNNNTGG 2 cut(s) 262, 4657
Bsu15I ATCGAT 2 cut(s) 717, 2808
Bsu36I CCTNAGG 1 cut(s) 588
BsuRI GGCC 4 cut(s) 2392, 2706, 3805, 4964
BsuTUI ATCGAT 2 cut(s) 717, 2808
BtrI CACGTC 1 cut(s) 2334
BtsI GCAGTG 3 cut(s) 322, 1059, 4610
BtsIMutI CAGTG 9 cut(s) 322, 660, 1059, 2714, 3121, 4279, 4539, 4610, 4731
CaiI CAGNNNCTG 2 cut(s) 571, 4203
CciI TCATGA 2 cut(s) 3505, 3727
CfoI GCGC 1 cut(s) 724
Cfr13I GGNCC 4 cut(s) 327, 550, 1545, 3803
ClaI ATCGAT 2 cut(s) 717, 2808
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
DraI TTTAAA 1 cut(s) 3328
Eam1104I CTCTTC 7 cut(s) 21, 1165, 2383, 3521, 3813, 3930, 4053
EarI CTCTTC 7 cut(s) 21, 1165, 2383, 3521, 3813, 3930, 4053
EciI GGCGGA 1 cut(s) 1334
Ecl136II GAGCTC 2 cut(s) 1158, 3859
Eco130I CCWWGG 4 cut(s) 2725, 3385, 4475, 4687
Eco24I GRGCYC 4 cut(s) 250, 1160, 1239, 3861
Eco31I GGTCTC 2 cut(s) 2742, 3125
Eco32I GATATC 1 cut(s) 2464
Eco47I GGWCC 3 cut(s) 327, 550, 1545
Eco53kI GAGCTC 2 cut(s) 1158, 3859
Eco57I CTGAAG 8 cut(s) 2574, 2716, 3056, 3125, 3545, 3740, 4382, 4911
Eco81I CCTNAGG 1 cut(s) 588
Eco88I CYCGRG 3 cut(s) 225, 428, 2613
EcoICRI GAGCTC 2 cut(s) 1158, 3859
EcoNI CCTNNNNNAGG 2 cut(s) 4474, 4982
EcoRI GAATTC 3 cut(s) 3548, 4285, 5053
EcoRII CCWGG 5 cut(s) 93, 1017, 1419, 1464, 4461
EcoRV GATATC 1 cut(s) 2464
EcoT14I CCWWGG 4 cut(s) 2725, 3385, 4475, 4687
EcoT22I ATGCAT 4 cut(s) 934, 1078, 1463, 3253
EcoT38I GRGCYC 4 cut(s) 250, 1160, 1239, 3861
ErhI CCWWGG 4 cut(s) 2725, 3385, 4475, 4687
Esp3I CGTCTC 1 cut(s) 228
FalI AAGNNNNNCTT 2 cut(s) 4949, 4981
FaqI GGGAC 3 cut(s) 1211, 2012, 2183
FauI CCCGC 1 cut(s) 2044
FauNDI CATATG 2 cut(s) 1131, 3452
FbaI TGATCA 7 cut(s) 864, 1402, 2476, 3133, 4243, 4927, 4953
FblI GTMKAC 2 cut(s) 1437, 1506
FriOI GRGCYC 4 cut(s) 250, 1160, 1239, 3861
FspI TGCGCA 1 cut(s) 723
GlaI GCGC 1 cut(s) 723
GsuI CTGGAG 4 cut(s) 2205, 3332, 4133, 4869
HaeIII GGCC 4 cut(s) 2392, 2706, 3805, 4964
HapII CCGG 2 cut(s) 2741, 3989
HhaI GCGC 1 cut(s) 724
Hin6I GCGC 1 cut(s) 722
HinP1I GCGC 1 cut(s) 722
HincII GTYRAC 2 cut(s) 2058, 4104
HindII GTYRAC 2 cut(s) 2058, 4104
HindIII AAGCTT 1 cut(s) 1883
HpaI GTTAAC 1 cut(s) 2058
HpaII CCGG 2 cut(s) 2741, 3989
Hpy166II GTNNAC 8 cut(s) 330, 1438, 1507, 2058, 3693, 3889, 3942, 4104
Hpy8I GTNNAC 8 cut(s) 330, 1438, 1507, 2058, 3693, 3889, 3942, 4104
HpyCH4IV ACGT 3 cut(s) 21, 221, 2333
HpyF10VI GCNNNNNNNGC 7 cut(s) 568, 1563, 1807, 2240, 3257, 3357, 4703
HpySE526I ACGT 3 cut(s) 21, 221, 2333
HspAI GCGC 1 cut(s) 722
KpnI GGTACC 1 cut(s) 4450
Ksp22I TGATCA 7 cut(s) 864, 1402, 2476, 3133, 4243, 4927, 4953
KspAI GTTAAC 1 cut(s) 2058
LguI GCTCTTC 4 cut(s) 1165, 2383, 3521, 3930
MaeII ACGT 3 cut(s) 21, 221, 2333
MbiI CCGCTC 1 cut(s) 1560
MfeI CAATTG 2 cut(s) 1896, 4182
MhlI GDGCHC 7 cut(s) 21, 242, 250, 1059, 1160, 1239, 3861
MlyI GAGTC 2 cut(s) 1199, 2544
MmeI TCCRAC 5 cut(s) 301, 536, 965, 1476, 4610
Mph1103I ATGCAT 4 cut(s) 934, 1078, 1463, 3253
MroXI GAANNNNTTC 6 cut(s) 44, 894, 1011, 3110, 3160, 3288
MslI CAYNNNNRTG 2 cut(s) 4655, 4935
MspA1I CMGCKG 4 cut(s) 571, 2948, 4349, 4402
MspCI CTTAAG 2 cut(s) 2414, 3344
MspI CCGG 2 cut(s) 2741, 3989
MspR9I CCNGG 5 cut(s) 95, 1019, 1421, 1466, 4463
MunI CAATTG 2 cut(s) 1896, 4182
Mva1269I GAATGC 6 cut(s) 169, 830, 932, 2816, 3099, 3414
MvaI CCWGG 5 cut(s) 95, 1019, 1421, 1466, 4463
MvnI CGCG 1 cut(s) 185
MwoI GCNNNNNNNGC 7 cut(s) 568, 1563, 1807, 2240, 3257, 3357, 4703
NdeI CATATG 2 cut(s) 1131, 3452
NheI GCTAGC 1 cut(s) 1724
NlaIV GGNNCC 7 cut(s) 249, 441, 648, 1546, 2449, 4345, 4448
NmuCI GTSAC 4 cut(s) 700, 952, 1866, 2792
NsbI TGCGCA 1 cut(s) 723
NsiI ATGCAT 4 cut(s) 934, 1078, 1463, 3253
NspI RCATGY 2 cut(s) 2562, 4940
NspV TTCGAA 1 cut(s) 2311
PacI TTAATTAA 1 cut(s) 1587
PagI TCATGA 2 cut(s) 3505, 3727
PciSI GCTCTTC 4 cut(s) 1165, 2383, 3521, 3930
PctI GAATGC 6 cut(s) 169, 830, 932, 2816, 3099, 3414
PdmI GAANNNNTTC 6 cut(s) 44, 894, 1011, 3110, 3160, 3288
PflFI GACNNNGTC 2 cut(s) 548, 1391
PflMI CCANNNNNTGG 1 cut(s) 2222
PfoI TCCNGGA 1 cut(s) 1017
PleI GAGTC 2 cut(s) 1198, 2543
PpsI GAGTC 2 cut(s) 1198, 2543
Ppu21I YACGTR 1 cut(s) 22
PshBI ATTAAT 4 cut(s) 378, 1344, 1668, 2502
PsiI TTATAA 1 cut(s) 2903
Psp124BI GAGCTC 2 cut(s) 1160, 3861
Psp6I CCWGG 5 cut(s) 93, 1017, 1419, 1464, 4461
PspGI CCWGG 5 cut(s) 93, 1017, 1419, 1464, 4461
PspN4I GGNNCC 7 cut(s) 249, 441, 648, 1546, 2449, 4345, 4448
PspPI GGNCC 4 cut(s) 327, 550, 1545, 3803
PstI CTGCAG 5 cut(s) 751, 2693, 3340, 4199, 4407
PstNI CAGNNNCTG 2 cut(s) 571, 4203
PsyI GACNNNGTC 2 cut(s) 548, 1391
PvuII CAGCTG 3 cut(s) 571, 2948, 4402
RseI CAYNNNNRTG 2 cut(s) 4655, 4935
SacI GAGCTC 2 cut(s) 1160, 3861
SapI GCTCTTC 4 cut(s) 1165, 2383, 3521, 3930
Sau96I GGNCC 4 cut(s) 327, 550, 1545, 3803
SchI GAGTC 2 cut(s) 1199, 2544
ScrFI CCNGG 5 cut(s) 95, 1019, 1421, 1466, 4463
SduI GDGCHC 7 cut(s) 21, 242, 250, 1059, 1160, 1239, 3861
SfcI CTRYAG 7 cut(s) 747, 2689, 3166, 3336, 4195, 4403, 4574
SfuI TTCGAA 1 cut(s) 2311
SinI GGWCC 3 cut(s) 327, 550, 1545
SmiMI CAYNNNNRTG 2 cut(s) 4655, 4935
SmlI CTYRAG 7 cut(s) 206, 2162, 2414, 2855, 3344, 3615, 3967
SmoI CTYRAG 7 cut(s) 206, 2162, 2414, 2855, 3344, 3615, 3967
SsiI CCGC 5 cut(s) 185, 1319, 1558, 2051, 4347
SspI AATATT 1 cut(s) 1306
SstI GAGCTC 2 cut(s) 1160, 3861
StyD4I CCNGG 5 cut(s) 93, 1017, 1419, 1464, 4461
StyI CCWWGG 4 cut(s) 2725, 3385, 4475, 4687
TaiI ACGT 3 cut(s) 24, 224, 2336
TaqI TCGA 7 cut(s) 717, 1395, 1645, 1945, 2311, 2808, 3952
TatI WGTACW 3 cut(s) 1150, 2623, 4909
TauI GCSGC 1 cut(s) 1560
TscAI CASTG 9 cut(s) 322, 667, 1066, 2714, 3121, 4286, 4539, 4617, 4738
TseFI GTSAC 4 cut(s) 700, 952, 1866, 2792
Tsp45I GTSAC 4 cut(s) 700, 952, 1866, 2792
TspGWI ACGGA 3 cut(s) 1708, 2440, 4310
TspRI CASTG 9 cut(s) 322, 667, 1066, 2714, 3121, 4286, 4539, 4617, 4738
Tth111I GACNNNGTC 2 cut(s) 548, 1391
Van91I CCANNNNNTGG 1 cut(s) 2222
Vha464I CTTAAG 2 cut(s) 2414, 3344
VpaK11BI GGWCC 3 cut(s) 327, 550, 1545
VspI ATTAAT 4 cut(s) 378, 1344, 1668, 2502
XagI CCTNNNNNAGG 2 cut(s) 4474, 4982
XceI RCATGY 2 cut(s) 2562, 4940
XmaJI CCTAGG 1 cut(s) 4475
XmiI GTMKAC 2 cut(s) 1437, 1506
XmnI GAANNNNTTC 6 cut(s) 44, 894, 1011, 3110, 3160, 3288
Zsp2I ATGCAT 4 cut(s) 934, 1078, 1463, 3253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.