Prupe.6G258600_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000451
Physical Location & Seq
Reverse (-)
25032611 .. 25034918
2308 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G258600.1

Sequence Viewer

Length: 1017 bp
ATGGCAAGTGTTCAAGAACTGGTCAAGAGTGACCCTTGGCAGGTCCCTGAAAAATTCCTCGTAGATAGGAATGAAGAAGACGAGCCAAAGAGTGATCTTTCTTCGAAGATCCCTATCATTGATCTTTCTCTGCTCTCTAGAGGGCAGAAAGAGGAGCTTGACAAACTGGACCAGGCTTGCAAAGAATGGGGATTCTTTCAGGTTGTGAATCATGGAGTGGTAGCAGAAGTGTTGCAGGAGATGAAGTATGCGACGGCCAAGTTCTTTCAACTTCCGTTGGAAGAGAAGAACAAGATTCGTATGGCATCCGGTGGGTTTCAAGGTTACGGGCAAGTCGATGGTGTTACCCGAGGGGAGACAATGGACTGGTCTGACCAACTGGTTCTCACTCTTTATCCAGCCCAATACAGGATGCTTAACTCTTGGCCAACAGAGCCAGAGGGATACAAGGAGGCTATTGAGGCATATTCAAGTGAAGTTAAAAGAGTTGGAGAGGAGCTCCCGAGGTCTCTATCTTTAATTATGGGGATGGAGAAGCATACTCTTCTTGAACTACATAAAGAGTTGCTCCAAACTCTGCGTGTGAACTACATTCCTCCATGCTCCATGCCTGATAAAGTACTAGGTCTAAGTCCACACTCGGACGCAAGCACCATAACCATACTGATGCAAGAAGACAATGTAACCGGGTTACATATTCGAAAAGAAGGTGAATGGGTGCCGGTGAAGCCAATTCCAAACGCTCTCGTTGTGAATGTGGGAGATGCTATTGAGATATGGAGCAATGGGAAGTACAAGAGCATTGAACATAGAGCTGTGGCAAACTCAGGCAAACTCAGGATATCTTATGCTTCATTTCTTTTCCCGCATGTTGACGTGGAAGTTGGACCATTTGATCATATGGTGGAGTCGTCAAGAACGTACAAGAAAGTCAAATATGGAGATTATCTGACGACTGCCTTGAAGAATAAACTGAAGGGAAAGACACACACTGAAATGGCCAAGACTGGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N Thaumatin

Protein Analysis

339

Amino Acids

38.19

Weight (kDa)

5.8

Isoelectric Point (pI)

35.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000451)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g13280 FvH4_6g13281 FvH4_6g13290 FvH4_6g13290 FvH4_6g13290 FvH4_6g13290 FvH4_6g13300 FvH4_6g13322
malus_domestica MD04G1132000.v1.1 MD04G1132100.v1.1 MD04G1132400.v1.1 MD12G1145100.v1.1 MD12G1145200.v1.1
prunus_persica Prupe.6G258600_v2.0.a1 Prupe.6G258700_v2.0.a1 Prupe.6G258800_v2.0.a1 Prupe.6G258800_v2.0.a1 Prupe.6G258900_v2.0.a1
pyrus_communis pycom04g12010 pycom04g12020
rosa_chinensis RchiOBHm_Chr3g0466131 RchiOBHm_Chr3g0466151 RchiOBHm_Chr3g0466161 RchiOBHm_Chr3g0466171 RchiOBHm_Chr3g0466181 RchiOBHm_Chr3g0466201 RchiOBHm_Chr3g0466211 RchiOBHm_Chr6g0251841
rosa_laevigata RLG00000015425 RLG00000024596 RLG00000024599 RLG00000024600 RLG00000024601 RLG00000024602
rosa_multiflora Rmu_co8112718.1_g000001 Rmu_co8178858.1_g000001 Rmu_co8388385.1_g000001 Rmu_sc0000350.1_g000002 Rmu_sc0000350.1_g000003 Rmu_sc0000350.1_g000004 Rmu_sc0000350.1_g000006 Rmu_sc0000350.1_g000011 Rmu_sc0002249.1_g000004 Rmu_sc0007597.1_g000012 Rmu_sc0012177.1_g000002 Rmu_sc0012177.1_g000006 Rmu_sc0012177.1_g000007 Rmu_sc0022084.1_g000003 Rmu_ssc0000303.1_g000004
rosa_roxburghii Rroxscaffold_6G00414720 Rroxscaffold_6G00414730 Rroxscaffold_6G00414740 Rroxscaffold_6G00414750 Rroxscaffold_6G00414760 Rroxscaffold_6G00414770 Rroxscaffold_6G00414780 Rroxscaffold_6G00414790
rosa_rugosa Rorug03G0079600 Rorug03G0079600 Rorug03G0079800 Rorug03G0080100 Rorug03G0080200 Rorug03G0080300 Rorug03G0080400 Rorug05G0504900
rosa_samantha Rh3BG147200 Rh3BG147300 Rh3BG147400 Rh3BG147500 Rh3BG147600 Rh3CG147900 Rh3CG148000 Rh3CG148100 Rh3CG148200 Rh3CG148300 Rh3CG148500 Rh3CG148600 Rh3DG147800 Rh3DG147900 Rh3DG148100 Rh3DG148300 Rh4BG237100 Rh6AG015600 Rh6AG015700 Rh6BG013700 Rh6CG069500
rosa_wichuraiana Rw3G011870 Rw3G011880 Rw3G011890 Rw3G011900 Rw3G011910 Rw3G011930 Rw6G001500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 31
AccB1I GGYRCC 1 cut(s) 718
AciI CCGC 1 cut(s) 866
AclWI GGATC 1 cut(s) 103
AcoI YGGCCR 3 cut(s) 255, 425, 999
AcsI RAATTY 1 cut(s) 53
AcuI CTGAAG 1 cut(s) 995
AfaI GTAC 3 cut(s) 621, 794, 923
AfiI CCNNNNNNNGG 2 cut(s) 40, 408
AgsI TTSAA 7 cut(s) 14, 269, 320, 471, 551, 806, 964
AjiI CACGTC 1 cut(s) 877
AjnI CCWGG 1 cut(s) 171
AluBI AGCT 3 cut(s) 157, 499, 815
AluI AGCT 3 cut(s) 157, 499, 815
Alw21I GWGCWC 1 cut(s) 501
Alw26I GTCTC 2 cut(s) 350, 513
AlwI GGATC 1 cut(s) 103
Ama87I CYCGRG 2 cut(s) 348, 502
AoxI GGCC 3 cut(s) 255, 425, 999
ApoI RAATTY 1 cut(s) 53
AspS9I GGNCC 3 cut(s) 43, 169, 887
AsuC2I CCSGG 1 cut(s) 688
AsuHPI GGTGA 2 cut(s) 722, 736
AsuII TTCGAA 2 cut(s) 104, 700
AvaI CYCGRG 2 cut(s) 348, 502
AvaII GGWCC 3 cut(s) 43, 169, 887
BalI TGGCCA 2 cut(s) 427, 1001
BanI GGYRCC 1 cut(s) 718
BanII GRGCYC 1 cut(s) 501
BbsI GAAGAC 2 cut(s) 84, 681
Bbv12I GWGCWC 1 cut(s) 501
BccI CCATC 2 cut(s) 332, 523
BceAI ACGGC 1 cut(s) 270
BciT130I CCWGG 1 cut(s) 173
BciVI GTATCC 1 cut(s) 437
BclI TGATCA 1 cut(s) 895
BcnI CCSGG 1 cut(s) 688
BcoDI GTCTC 2 cut(s) 350, 513
BfaI CTAG 2 cut(s) 138, 623
BfuAI ACCTGC 1 cut(s) 31
BfuI GTATCC 1 cut(s) 437
BmcAI AGTACT 1 cut(s) 621
Bme1390I CCNGG 2 cut(s) 173, 688
Bme18I GGWCC 3 cut(s) 43, 169, 887
BmeT110I CYCGRG 2 cut(s) 348, 502
BmgBI CACGTC 1 cut(s) 877
BmgT120I GGNCC 3 cut(s) 43, 169, 887
BmiI GGNNCC 2 cut(s) 45, 720
BmrFI CCNGG 2 cut(s) 173, 688
BmsI GCATC 4 cut(s) 314, 402, 657, 754
BpiI GAAGAC 2 cut(s) 84, 681
BplI GAGNNNNNCTC 2 cut(s) 483, 515
Bpu14I TTCGAA 2 cut(s) 104, 700
BpuMI CCSGG 1 cut(s) 688
BsaBI GATNNNNATC 1 cut(s) 113
BsaI GGTCTC 1 cut(s) 513
BsaJI CCNNGG 3 cut(s) 35, 349, 503
BsaWI WCCGGW 1 cut(s) 308
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 2 cut(s) 40, 408
Bse118I RCCGGY 1 cut(s) 721
Bse1I ACTGG 5 cut(s) 24, 171, 371, 384, 1012
Bse3DI GCAATG 1 cut(s) 790
Bse8I GATNNNNATC 1 cut(s) 113
BseBI CCWGG 1 cut(s) 173
BseDI CCNNGG 3 cut(s) 35, 349, 503
BseGI GGATG 3 cut(s) 305, 417, 534
BseJI GATNNNNATC 1 cut(s) 113
BseLI CCNNNNNNNGG 2 cut(s) 40, 408
BseMI GCAATG 1 cut(s) 790
BseMII CTCAG 2 cut(s) 840, 850
BseNI ACTGG 5 cut(s) 24, 171, 371, 384, 1012
BseRI GAGGAG 2 cut(s) 167, 509
BshFI GGCC 3 cut(s) 257, 427, 1001
BshNI GGYRCC 1 cut(s) 718
BsiHKAI GWGCWC 1 cut(s) 501
BsiHKCI CYCGRG 2 cut(s) 348, 502
BsiSI CCGG 3 cut(s) 309, 687, 722
BslFI GGGAC 1 cut(s) 29
BslI CCNNNNNNNGG 2 cut(s) 40, 408
BsmAI GTCTC 2 cut(s) 350, 513
BsmFI GGGAC 1 cut(s) 29
BsnI GGCC 3 cut(s) 257, 427, 1001
Bso31I GGTCTC 1 cut(s) 513
BsoBI CYCGRG 2 cut(s) 348, 502
Bsp119I TTCGAA 2 cut(s) 104, 700
Bsp1286I GDGCHC 1 cut(s) 501
Bsp143I GATC 4 cut(s) 94, 108, 121, 895
BspACI CCGC 1 cut(s) 866
BspANI GGCC 3 cut(s) 257, 427, 1001
BspCNI CTCAG 2 cut(s) 839, 849
BspLI GGNNCC 2 cut(s) 45, 720
BspMI ACCTGC 1 cut(s) 31
BspPI GGATC 1 cut(s) 103
BspT104I TTCGAA 2 cut(s) 104, 700
BspT107I GGYRCC 1 cut(s) 718
BspTNI GGTCTC 1 cut(s) 513
BsrDI GCAATG 1 cut(s) 790
BsrFI RCCGGY 1 cut(s) 721
BsrI ACTGG 5 cut(s) 24, 171, 371, 384, 1012
BssAI RCCGGY 1 cut(s) 721
BssECI CCNNGG 3 cut(s) 35, 349, 503
BssMI GATC 4 cut(s) 94, 108, 121, 895
BssT1I CCWWGG 1 cut(s) 35
Bst2UI CCWGG 1 cut(s) 173
Bst6I CTCTTC 2 cut(s) 276, 549
BstBI TTCGAA 2 cut(s) 104, 700
BstC8I GCNNGC 2 cut(s) 178, 649
BstDEI CTNAG 3 cut(s) 629, 826, 836
BstF5I GGATG 3 cut(s) 305, 417, 534
BstKTI GATC 4 cut(s) 97, 111, 124, 898
BstMAI GTCTC 2 cut(s) 350, 513
BstMBI GATC 4 cut(s) 94, 108, 121, 895
BstMWI GCNNNNNNNGC 3 cut(s) 433, 461, 727
BstNI CCWGG 1 cut(s) 173
BstNSI RCATGY 1 cut(s) 872
BstSCI CCNGG 2 cut(s) 171, 686
BstV2I GAAGAC 2 cut(s) 84, 681
BstX2I RGATCY 1 cut(s) 108
BstYI RGATCY 1 cut(s) 108
BsuI GTATCC 1 cut(s) 437
BsuRI GGCC 3 cut(s) 257, 427, 1001
BtrI CACGTC 1 cut(s) 877
BtsCI GGATG 3 cut(s) 305, 417, 534
BtsIMutI CAGTG 1 cut(s) 990
BveI ACCTGC 1 cut(s) 31
Cac8I GCNNGC 2 cut(s) 178, 649
Cfr10I RCCGGY 1 cut(s) 721
Cfr13I GGNCC 3 cut(s) 43, 169, 887
CseI GACGC 1 cut(s) 653
Csp6I GTAC 3 cut(s) 620, 793, 922
CviAII CATG 4 cut(s) 212, 600, 607, 869
CviQI GTAC 3 cut(s) 620, 793, 922
DdeI CTNAG 3 cut(s) 629, 826, 836
DpnI GATC 4 cut(s) 96, 110, 123, 897
DpnII GATC 4 cut(s) 94, 108, 121, 895
EaeI YGGCCR 3 cut(s) 255, 425, 999
Eam1104I CTCTTC 2 cut(s) 276, 549
EarI CTCTTC 2 cut(s) 276, 549
Ecl136II GAGCTC 1 cut(s) 499
Eco130I CCWWGG 1 cut(s) 35
Eco24I GRGCYC 1 cut(s) 501
Eco31I GGTCTC 1 cut(s) 513
Eco32I GATATC 1 cut(s) 843
Eco47I GGWCC 3 cut(s) 43, 169, 887
Eco53kI GAGCTC 1 cut(s) 499
Eco57I CTGAAG 1 cut(s) 995
Eco88I CYCGRG 2 cut(s) 348, 502
EcoICRI GAGCTC 1 cut(s) 499
EcoO109I RGGNCCY 1 cut(s) 43
EcoRII CCWGG 1 cut(s) 171
EcoRV GATATC 1 cut(s) 843
EcoT14I CCWWGG 1 cut(s) 35
EcoT38I GRGCYC 1 cut(s) 501
ErhI CCWWGG 1 cut(s) 35
FaeI CATG 4 cut(s) 215, 603, 610, 872
FalI AAGNNNNNCTT 2 cut(s) 141, 173
FaqI GGGAC 1 cut(s) 29
FatI CATG 4 cut(s) 211, 599, 606, 868
FauI CCCGC 1 cut(s) 873
FauNDI CATATG 1 cut(s) 900
FbaI TGATCA 1 cut(s) 895
FokI GGATG 3 cut(s) 292, 424, 541
FriOI GRGCYC 1 cut(s) 501
FspBI CTAG 2 cut(s) 138, 623
HaeIII GGCC 3 cut(s) 257, 427, 1001
HapII CCGG 3 cut(s) 309, 687, 722
HgaI GACGC 1 cut(s) 653
Hin1II CATG 4 cut(s) 215, 603, 610, 872
HincII GTYRAC 1 cut(s) 874
HindII GTYRAC 1 cut(s) 874
HinfI GANTC 4 cut(s) 192, 208, 295, 908
HpaII CCGG 3 cut(s) 309, 687, 722
HphI GGTGA 2 cut(s) 722, 736
Hpy166II GTNNAC 3 cut(s) 586, 635, 874
Hpy188I TCNGA 3 cut(s) 373, 643, 951
Hpy188III TCNNGA 7 cut(s) 14, 25, 138, 502, 548, 838, 915
Hpy8I GTNNAC 3 cut(s) 586, 635, 874
Hpy99I CGWCG 1 cut(s) 256
HpyAV CCTTC 2 cut(s) 701, 970
HpyCH4IV ACGT 2 cut(s) 876, 920
HpyCH4V TGCA 3 cut(s) 180, 235, 670
HpyF10VI GCNNNNNNNGC 3 cut(s) 433, 461, 727
HpyF3I CTNAG 3 cut(s) 629, 826, 836
HpySE526I ACGT 2 cut(s) 876, 920
Hsp92II CATG 4 cut(s) 215, 603, 610, 872
Ksp22I TGATCA 1 cut(s) 895
Kzo9I GATC 4 cut(s) 94, 108, 121, 895
LmnI GCTCC 6 cut(s) 154, 496, 504, 573, 608, 780
LweI GCATC 4 cut(s) 314, 402, 657, 754
MaeI CTAG 2 cut(s) 138, 623
MaeII ACGT 2 cut(s) 876, 920
MaeIII GTNAC 5 cut(s) 29, 323, 343, 682, 690
MalI GATC 4 cut(s) 96, 110, 123, 897
MboI GATC 4 cut(s) 94, 108, 121, 895
MboII GAAGA 9 cut(s) 86, 89, 93, 118, 293, 298, 536, 686, 976
MflI RGATCY 1 cut(s) 108
MhlI GDGCHC 1 cut(s) 501
MlsI TGGCCA 2 cut(s) 427, 1001
MluCI AATT 3 cut(s) 53, 519, 732
MluNI TGGCCA 2 cut(s) 427, 1001
MlyI GAGTC 1 cut(s) 917
MmeI TCCRAC 3 cut(s) 258, 469, 865
Mox20I TGGCCA 2 cut(s) 427, 1001
MscI TGGCCA 2 cut(s) 427, 1001
MseI TTAA 3 cut(s) 417, 480, 518
MslI CAYNNNNRTG 2 cut(s) 665, 995
Msp20I TGGCCA 2 cut(s) 427, 1001
MspI CCGG 3 cut(s) 309, 687, 722
MspR9I CCNGG 2 cut(s) 173, 688
MvaI CCWGG 1 cut(s) 173
MwoI GCNNNNNNNGC 3 cut(s) 433, 461, 727
NciI CCSGG 1 cut(s) 688
NdeI CATATG 1 cut(s) 900
NdeII GATC 4 cut(s) 94, 108, 121, 895
NlaIII CATG 4 cut(s) 215, 603, 610, 872
NlaIV GGNNCC 2 cut(s) 45, 720
NmuCI GTSAC 1 cut(s) 29
NspI RCATGY 1 cut(s) 872
NspV TTCGAA 2 cut(s) 104, 700
PcsI WCGNNNNNNNCGW 2 cut(s) 333, 917
PfeI GAWTC 3 cut(s) 192, 208, 295
PleI GAGTC 1 cut(s) 916
PpsI GAGTC 1 cut(s) 916
PpuMI RGGWCCY 1 cut(s) 43
Psp124BI GAGCTC 1 cut(s) 501
Psp5II RGGWCCY 1 cut(s) 43
Psp6I CCWGG 1 cut(s) 171
PspGI CCWGG 1 cut(s) 171
PspN4I GGNNCC 2 cut(s) 45, 720
PspPI GGNCC 3 cut(s) 43, 169, 887
PspPPI RGGWCCY 1 cut(s) 43
PsuI RGATCY 1 cut(s) 108
RsaI GTAC 3 cut(s) 621, 794, 923
RsaNI GTAC 3 cut(s) 620, 793, 922
RseI CAYNNNNRTG 2 cut(s) 665, 995
SacI GAGCTC 1 cut(s) 501
SaqAI TTAA 3 cut(s) 417, 480, 518
Sau3AI GATC 4 cut(s) 94, 108, 121, 895
Sau96I GGNCC 3 cut(s) 43, 169, 887
ScaI AGTACT 1 cut(s) 621
SchI GAGTC 1 cut(s) 917
ScrFI CCNGG 2 cut(s) 173, 688
SduI GDGCHC 1 cut(s) 501
SfaNI GCATC 4 cut(s) 314, 402, 657, 754
SfuI TTCGAA 2 cut(s) 104, 700
SinI GGWCC 3 cut(s) 43, 169, 887
SmiMI CAYNNNNRTG 2 cut(s) 665, 995
Sse9I AATT 3 cut(s) 53, 519, 732
SsiI CCGC 1 cut(s) 866
SspMI CTAG 2 cut(s) 138, 623
SstI GAGCTC 1 cut(s) 501
StyD4I CCNGG 2 cut(s) 171, 686
StyI CCWWGG 1 cut(s) 35
TaiI ACGT 2 cut(s) 879, 923
TaqI TCGA 3 cut(s) 104, 336, 700
TasI AATT 3 cut(s) 53, 519, 732
TatI WGTACW 2 cut(s) 619, 792
TfiI GAWTC 3 cut(s) 192, 208, 295
Tru1I TTAA 3 cut(s) 417, 480, 518
Tru9I TTAA 3 cut(s) 417, 480, 518
TscAI CASTG 1 cut(s) 997
TseFI GTSAC 1 cut(s) 29
Tsp45I GTSAC 1 cut(s) 29
TspDTI ATGAA 3 cut(s) 87, 257, 843
TspGWI ACGGA 1 cut(s) 264
TspRI CASTG 1 cut(s) 997
VpaK11BI GGWCC 3 cut(s) 43, 169, 887
XapI RAATTY 1 cut(s) 53
XbaI TCTAGA 1 cut(s) 137
XceI RCATGY 1 cut(s) 872
XspI CTAG 2 cut(s) 138, 623
ZrmI AGTACT 1 cut(s) 621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.