Prupe.6G258800_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000451
Physical Location & Seq
Reverse (-)
25038340 .. 25040333
1994 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G258800.1

Sequence Viewer

Length: 1083 bp
ATGGCTTCGAACCCCGATGCACCGGCTTATGGCTCATCTCTTCCAGCACCAAATGTTCAAGAAATAGTAAGGAGTGACCCTTTGCTGGTACCTGAAAGATACCTTATTAGGAATGAAGAAGACTTGCCAAAGTGTGGAGATCATATTAGTCATCTTTCTTCTGAGGTTCCTATCATTGATTTCTCTCTGCTCTCAAAAGGGCACAAGGAGGAGCTTAAGAAACTTGACCTGGCTTGCAAAGAATGGGGATTTTTTCAGATGGTAAATCATGGAGTGGCAACAGAAGTGTTGCAGGCCATGAAGGATGCTGCGGCAGAGTTCTTTGAGCTTGAGTTGGAAGAGAAGAATAAGATTGCTATGCCACCAGATGACATACAAGGCTACGGGCATACCCATGTGGTCTCAGAAAAGCAAATACTGGACTGGTCTGACTCACTGAGTCTCTTTGTTTACCCGTCCCGGTATAGAAAGCTCAAGCTTTGGCCAACCACACCAAAGGAATTCAAGGAGGTTATTGAGGTGTATTCTAGTGAAGTTAAAAAAGTTGGAGAGGAGCTCCTAAGGTCTCTATCTATAATTATGGGGATGGAGAGGGACACTCTTCTTGGACTGCATAAAGAGTTGCTCCAAGCTTTGCGGGTGAACTACTATCCTCAATGTTGCATGCCTGATAAAGTACTAGGTCTAAGTCCTCACTCGGACAAAAACTCAATAACAATACTTTTGCAAGAAGACAATGCGACCGGGTTACAGATTCGACAAGCGGGAGAATGGGTTCCGGTGAAGCCAATTCCAAACGCTCTCGTTGTGAATGTTGGAGATGCTATTGAGATATGGAGTAATGGGAAGTACAAGAGCATTGAACACAGAGTTGTGACAACCGAAAGTAAGGCGAGATTGTCATATGCATCATTTCTTTTGCCAAATGACGATGTGGAAGTTGAACCATTTGATTACATGGTGGAGTCGACAGGGTCCGTTCGGATGTACAAGAAAGTCAGATTTGGAGATTATCTGAGGCAAGCGTTTAAGAAGAAAATCAATGGGAAGGCACACATTCAGACGGCGAGGATTGAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N Thaumatin

Protein Analysis

361

Amino Acids

40.82

Weight (kDa)

5.77

Isoelectric Point (pI)

50.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000451)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g13280 FvH4_6g13281 FvH4_6g13290 FvH4_6g13290 FvH4_6g13290 FvH4_6g13290 FvH4_6g13300 FvH4_6g13322
malus_domestica MD04G1132000.v1.1 MD04G1132100.v1.1 MD04G1132400.v1.1 MD12G1145100.v1.1 MD12G1145200.v1.1
prunus_persica Prupe.6G258600_v2.0.a1 Prupe.6G258700_v2.0.a1 Prupe.6G258800_v2.0.a1 Prupe.6G258800_v2.0.a1 Prupe.6G258900_v2.0.a1
pyrus_communis pycom04g12010 pycom04g12020
rosa_chinensis RchiOBHm_Chr3g0466131 RchiOBHm_Chr3g0466151 RchiOBHm_Chr3g0466161 RchiOBHm_Chr3g0466171 RchiOBHm_Chr3g0466181 RchiOBHm_Chr3g0466201 RchiOBHm_Chr3g0466211 RchiOBHm_Chr6g0251841
rosa_laevigata RLG00000015425 RLG00000024596 RLG00000024599 RLG00000024600 RLG00000024601 RLG00000024602
rosa_multiflora Rmu_co8112718.1_g000001 Rmu_co8178858.1_g000001 Rmu_co8388385.1_g000001 Rmu_sc0000350.1_g000002 Rmu_sc0000350.1_g000003 Rmu_sc0000350.1_g000004 Rmu_sc0000350.1_g000006 Rmu_sc0000350.1_g000011 Rmu_sc0002249.1_g000004 Rmu_sc0007597.1_g000012 Rmu_sc0012177.1_g000002 Rmu_sc0012177.1_g000006 Rmu_sc0012177.1_g000007 Rmu_sc0022084.1_g000003 Rmu_ssc0000303.1_g000004
rosa_roxburghii Rroxscaffold_6G00414720 Rroxscaffold_6G00414730 Rroxscaffold_6G00414740 Rroxscaffold_6G00414750 Rroxscaffold_6G00414760 Rroxscaffold_6G00414770 Rroxscaffold_6G00414780 Rroxscaffold_6G00414790
rosa_rugosa Rorug03G0079600 Rorug03G0079600 Rorug03G0079800 Rorug03G0080100 Rorug03G0080200 Rorug03G0080300 Rorug03G0080400 Rorug05G0504900
rosa_samantha Rh3BG147200 Rh3BG147300 Rh3BG147400 Rh3BG147500 Rh3BG147600 Rh3CG147900 Rh3CG148000 Rh3CG148100 Rh3CG148200 Rh3CG148300 Rh3CG148500 Rh3CG148600 Rh3DG147800 Rh3DG147900 Rh3DG148100 Rh3DG148300 Rh4BG237100 Rh6AG015600 Rh6AG015700 Rh6BG013700 Rh6CG069500
rosa_wichuraiana Rw3G011870 Rw3G011880 Rw3G011890 Rw3G011900 Rw3G011910 Rw3G011930 Rw6G001500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 88
AccB1I GGYRCC 1 cut(s) 88
AccB7I CCANNNNNTGG 1 cut(s) 134
AccI GTMKAC 1 cut(s) 968
AciI CCGC 3 cut(s) 311, 637, 764
AcoI YGGCCR 1 cut(s) 482
AcsI RAATTY 1 cut(s) 500
AfaI GTAC 4 cut(s) 90, 678, 851, 989
AfiI CCNNNNNNNGG 3 cut(s) 29, 85, 134
AflII CTTAAG 1 cut(s) 215
AgsI TTSAA 5 cut(s) 59, 505, 863, 944, 1076
AjnI CCWGG 1 cut(s) 228
AloI GAACNNNNNNTCC 2 cut(s) 759, 791
AluBI AGCT 6 cut(s) 214, 328, 472, 478, 556, 632
AluI AGCT 6 cut(s) 214, 328, 472, 478, 556, 632
Alw21I GWGCWC 1 cut(s) 558
Alw26I GTCTC 3 cut(s) 406, 446, 570
AoxI GGCC 2 cut(s) 294, 482
ApeKI GCWGC 1 cut(s) 308
ApoI RAATTY 1 cut(s) 500
Asp700I GAANNNNTTC 1 cut(s) 774
Asp718I GGTACC 1 cut(s) 88
AspS9I GGNCC 1 cut(s) 975
AsuC2I CCSGG 2 cut(s) 460, 745
AsuHPI GGTGA 2 cut(s) 652, 793
AsuII TTCGAA 1 cut(s) 8
AvaII GGWCC 1 cut(s) 975
AxyI CCTNAGG 1 cut(s) 560
BaeGI GKGCMC 1 cut(s) 204
BalI TGGCCA 1 cut(s) 484
BanI GGYRCC 1 cut(s) 88
BanII GRGCYC 1 cut(s) 558
BbsI GAAGAC 2 cut(s) 126, 738
Bbv12I GWGCWC 1 cut(s) 558
BbvI GCAGC 1 cut(s) 295
BccI CCATC 2 cut(s) 253, 580
BceAI ACGGC 1 cut(s) 1080
BciT130I CCWGG 1 cut(s) 230
BcnI CCSGG 2 cut(s) 460, 745
BcoDI GTCTC 3 cut(s) 406, 446, 570
BfaI CTAG 2 cut(s) 528, 680
BfrI CTTAAG 1 cut(s) 215
BisI GCNGC 2 cut(s) 309, 312
BlsI GCNGC 2 cut(s) 310, 313
BmcAI AGTACT 1 cut(s) 678
Bme1390I CCNGG 3 cut(s) 230, 460, 745
Bme18I GGWCC 1 cut(s) 975
BmgT120I GGNCC 1 cut(s) 975
BmiI GGNNCC 4 cut(s) 90, 168, 777, 976
BmrFI CCNGG 3 cut(s) 230, 460, 745
BmsI GCATC 4 cut(s) 7, 295, 811, 917
BpiI GAAGAC 2 cut(s) 126, 738
BplI GAGNNNNNCTC 4 cut(s) 540, 572, 583, 615
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 2 cut(s) 350, 458
BpuMI CCSGG 2 cut(s) 460, 745
BsaI GGTCTC 2 cut(s) 406, 570
BsaWI WCCGGW 1 cut(s) 778
BsaXI ACNNNNNCTCC 2 cut(s) 759, 789
Bsc4I CCNNNNNNNGG 3 cut(s) 29, 85, 134
Bse118I RCCGGY 1 cut(s) 22
Bse1I ACTGG 2 cut(s) 423, 428
Bse21I CCTNAGG 1 cut(s) 560
BseBI CCWGG 1 cut(s) 230
BseGI GGATG 3 cut(s) 310, 591, 990
BseLI CCNNNNNNNGG 3 cut(s) 29, 85, 134
BseMII CTCAG 4 cut(s) 153, 417, 428, 1007
BseNI ACTGG 2 cut(s) 423, 428
BseRI GAGGAG 2 cut(s) 224, 566
BseSI GKGCMC 1 cut(s) 204
BseXI GCAGC 1 cut(s) 295
Bsh1285I CGRYCG 1 cut(s) 744
BshFI GGCC 2 cut(s) 296, 484
BshNI GGYRCC 1 cut(s) 88
BsiEI CGRYCG 1 cut(s) 744
BsiHKAI GWGCWC 1 cut(s) 558
BsiSI CCGG 4 cut(s) 23, 460, 744, 779
BslFI GGGAC 2 cut(s) 442, 608
BslI CCNNNNNNNGG 3 cut(s) 29, 85, 134
BsmAI GTCTC 3 cut(s) 406, 446, 570
BsmFI GGGAC 2 cut(s) 442, 608
BsnI GGCC 2 cut(s) 296, 484
Bso31I GGTCTC 2 cut(s) 406, 570
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 2 cut(s) 204, 558
Bsp1407I TGTACA 1 cut(s) 987
Bsp143I GATC 1 cut(s) 139
BspACI CCGC 3 cut(s) 311, 637, 764
BspANI GGCC 2 cut(s) 296, 484
BspCNI CTCAG 4 cut(s) 154, 416, 429, 1008
BspLI GGNNCC 4 cut(s) 90, 168, 777, 976
BspT104I TTCGAA 1 cut(s) 8
BspT107I GGYRCC 1 cut(s) 88
BspTI CTTAAG 1 cut(s) 215
BspTNI GGTCTC 2 cut(s) 406, 570
BsrFI RCCGGY 1 cut(s) 22
BsrGI TGTACA 1 cut(s) 987
BsrI ACTGG 2 cut(s) 423, 428
BssAI RCCGGY 1 cut(s) 22
BssMI GATC 1 cut(s) 139
Bst2UI CCWGG 1 cut(s) 230
Bst6I CTCTTC 3 cut(s) 45, 333, 606
BstAFI CTTAAG 1 cut(s) 215
BstAUI TGTACA 1 cut(s) 987
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 4 cut(s) 235, 294, 665, 1023
BstDEI CTNAG 6 cut(s) 162, 403, 437, 560, 686, 1016
BstF5I GGATG 3 cut(s) 310, 591, 990
BstKTI GATC 1 cut(s) 142
BstMAI GTCTC 3 cut(s) 406, 446, 570
BstMBI GATC 1 cut(s) 139
BstMCI CGRYCG 1 cut(s) 744
BstNI CCWGG 1 cut(s) 230
BstNSI RCATGY 1 cut(s) 667
BstSCI CCNGG 3 cut(s) 228, 458, 743
BstSLI GKGCMC 1 cut(s) 204
BstV1I GCAGC 1 cut(s) 295
BstV2I GAAGAC 2 cut(s) 126, 738
Bsu36I CCTNAGG 1 cut(s) 560
BsuRI GGCC 2 cut(s) 296, 484
BtsCI GGATG 3 cut(s) 310, 591, 990
BtsIMutI CAGTG 1 cut(s) 434
Cac8I GCNNGC 4 cut(s) 235, 294, 665, 1023
Cfr10I RCCGGY 1 cut(s) 22
Cfr13I GGNCC 1 cut(s) 975
Csp6I GTAC 4 cut(s) 89, 677, 850, 988
CviAII CATG 5 cut(s) 269, 298, 395, 664, 958
CviQI GTAC 4 cut(s) 89, 677, 850, 988
DdeI CTNAG 6 cut(s) 162, 403, 437, 560, 686, 1016
DpnI GATC 1 cut(s) 141
DpnII GATC 1 cut(s) 139
EaeI YGGCCR 1 cut(s) 482
Eam1104I CTCTTC 3 cut(s) 45, 333, 606
EarI CTCTTC 3 cut(s) 45, 333, 606
Ecl136II GAGCTC 1 cut(s) 556
Eco24I GRGCYC 1 cut(s) 558
Eco31I GGTCTC 2 cut(s) 406, 570
Eco47I GGWCC 1 cut(s) 975
Eco53kI GAGCTC 1 cut(s) 556
Eco81I CCTNAGG 1 cut(s) 560
EcoICRI GAGCTC 1 cut(s) 556
EcoRI GAATTC 1 cut(s) 500
EcoRII CCWGG 1 cut(s) 228
EcoT22I ATGCAT 1 cut(s) 910
EcoT38I GRGCYC 1 cut(s) 558
FaeI CATG 5 cut(s) 272, 301, 398, 667, 961
FaqI GGGAC 2 cut(s) 442, 608
FatI CATG 5 cut(s) 268, 297, 394, 663, 957
FauI CCCGC 2 cut(s) 630, 757
FauNDI CATATG 1 cut(s) 904
FblI GTMKAC 1 cut(s) 968
Fnu4HI GCNGC 2 cut(s) 309, 312
FokI GGATG 3 cut(s) 317, 598, 997
FriOI GRGCYC 1 cut(s) 558
Fsp4HI GCNGC 2 cut(s) 309, 312
FspBI CTAG 2 cut(s) 528, 680
GluI GCNGC 2 cut(s) 309, 312
HaeIII GGCC 2 cut(s) 296, 484
HapII CCGG 4 cut(s) 23, 460, 744, 779
Hin1II CATG 5 cut(s) 272, 301, 398, 667, 961
HincII GTYRAC 1 cut(s) 969
HindII GTYRAC 1 cut(s) 969
HindIII AAGCTT 2 cut(s) 476, 630
HinfI GANTC 4 cut(s) 431, 439, 754, 965
HpaII CCGG 4 cut(s) 23, 460, 744, 779
HphI GGTGA 2 cut(s) 652, 793
Hpy166II GTNNAC 3 cut(s) 451, 643, 969
Hpy188I TCNGA 9 cut(s) 163, 258, 406, 430, 700, 984, 1001, 1017, 1062
Hpy188III TCNNGA 1 cut(s) 59
Hpy8I GTNNAC 3 cut(s) 451, 643, 969
HpyAV CCTTC 2 cut(s) 295, 1042
HpyCH4V TGCA 7 cut(s) 20, 237, 292, 613, 663, 727, 908
HpyF3I CTNAG 6 cut(s) 162, 403, 437, 560, 686, 1016
Hsp92II CATG 5 cut(s) 272, 301, 398, 667, 961
KpnI GGTACC 1 cut(s) 92
Kzo9I GATC 1 cut(s) 139
LmnI GCTCC 4 cut(s) 211, 553, 561, 630
Lsp1109I GCAGC 1 cut(s) 295
LweI GCATC 4 cut(s) 7, 295, 811, 917
MaeI CTAG 2 cut(s) 528, 680
MaeIII GTNAC 3 cut(s) 74, 747, 874
MalI GATC 1 cut(s) 141
MboI GATC 1 cut(s) 139
MboII GAAGA 9 cut(s) 32, 128, 131, 150, 350, 355, 593, 743, 1045
MhlI GDGCHC 2 cut(s) 204, 558
MlsI TGGCCA 1 cut(s) 484
MluCI AATT 3 cut(s) 500, 576, 789
MluNI TGGCCA 1 cut(s) 484
MlyI GAGTC 3 cut(s) 425, 448, 974
MmeI TCCRAC 3 cut(s) 315, 526, 796
Mox20I TGGCCA 1 cut(s) 484
Mph1103I ATGCAT 1 cut(s) 910
MroXI GAANNNNTTC 1 cut(s) 774
MscI TGGCCA 1 cut(s) 484
MseI TTAA 3 cut(s) 216, 537, 1029
MslI CAYNNNNRTG 1 cut(s) 393
Msp20I TGGCCA 1 cut(s) 484
MspCI CTTAAG 1 cut(s) 215
MspI CCGG 4 cut(s) 23, 460, 744, 779
MspR9I CCNGG 3 cut(s) 230, 460, 745
MvaI CCWGG 1 cut(s) 230
NciI CCSGG 2 cut(s) 460, 745
NdeI CATATG 1 cut(s) 904
NdeII GATC 1 cut(s) 139
NlaIII CATG 5 cut(s) 272, 301, 398, 667, 961
NlaIV GGNNCC 4 cut(s) 90, 168, 777, 976
NmuCI GTSAC 2 cut(s) 74, 874
NsiI ATGCAT 1 cut(s) 910
NspI RCATGY 1 cut(s) 667
NspV TTCGAA 1 cut(s) 8
PaeI GCATGC 1 cut(s) 667
PdmI GAANNNNTTC 1 cut(s) 774
PfeI GAWTC 1 cut(s) 754
PflFI GACNNNGTC 1 cut(s) 973
PflMI CCANNNNNTGG 1 cut(s) 134
PkrI GCNGC 2 cut(s) 310, 313
PleI GAGTC 3 cut(s) 425, 447, 973
PpsI GAGTC 3 cut(s) 425, 447, 973
Psp124BI GAGCTC 1 cut(s) 558
Psp6I CCWGG 1 cut(s) 228
PspGI CCWGG 1 cut(s) 228
PspN4I GGNNCC 4 cut(s) 90, 168, 777, 976
PspPI GGNCC 1 cut(s) 975
PsyI GACNNNGTC 1 cut(s) 973
RsaI GTAC 4 cut(s) 90, 678, 851, 989
RsaNI GTAC 4 cut(s) 89, 677, 850, 988
RseI CAYNNNNRTG 1 cut(s) 393
SacI GAGCTC 1 cut(s) 558
SalI GTCGAC 1 cut(s) 967
SaqAI TTAA 3 cut(s) 216, 537, 1029
SatI GCNGC 2 cut(s) 309, 312
Sau3AI GATC 1 cut(s) 139
Sau96I GGNCC 1 cut(s) 975
ScaI AGTACT 1 cut(s) 678
SchI GAGTC 3 cut(s) 425, 448, 974
ScrFI CCNGG 3 cut(s) 230, 460, 745
SduI GDGCHC 2 cut(s) 204, 558
SfaNI GCATC 4 cut(s) 7, 295, 811, 917
SfuI TTCGAA 1 cut(s) 8
SinI GGWCC 1 cut(s) 975
SmiMI CAYNNNNRTG 1 cut(s) 393
SmlI CTYRAG 3 cut(s) 215, 329, 473
SmoI CTYRAG 3 cut(s) 215, 329, 473
SphI GCATGC 1 cut(s) 667
Sse9I AATT 3 cut(s) 500, 576, 789
SsiI CCGC 3 cut(s) 311, 637, 764
SspMI CTAG 2 cut(s) 528, 680
SstI GAGCTC 1 cut(s) 558
StyD4I CCNGG 3 cut(s) 228, 458, 743
TaqI TCGA 3 cut(s) 8, 757, 968
TasI AATT 3 cut(s) 500, 576, 789
TatI WGTACW 3 cut(s) 676, 849, 987
TauI GCSGC 1 cut(s) 314
TfiI GAWTC 1 cut(s) 754
Tru1I TTAA 3 cut(s) 216, 537, 1029
Tru9I TTAA 3 cut(s) 216, 537, 1029
TscAI CASTG 1 cut(s) 441
TseFI GTSAC 2 cut(s) 74, 874
TseI GCWGC 1 cut(s) 308
Tsp45I GTSAC 2 cut(s) 74, 874
TspDTI ATGAA 2 cut(s) 129, 314
TspGWI ACGGA 1 cut(s) 967
TspRI CASTG 1 cut(s) 441
Tth111I GACNNNGTC 1 cut(s) 973
Van91I CCANNNNNTGG 1 cut(s) 134
Vha464I CTTAAG 1 cut(s) 215
VpaK11BI GGWCC 1 cut(s) 975
XapI RAATTY 1 cut(s) 500
XceI RCATGY 1 cut(s) 667
XmiI GTMKAC 1 cut(s) 968
XmnI GAANNNNTTC 1 cut(s) 774
XspI CTAG 2 cut(s) 528, 680
ZrmI AGTACT 1 cut(s) 678
Zsp2I ATGCAT 1 cut(s) 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.