Prupe.7G207300_v2.0.a1

Belongs to the nucleosome assembly protein (NAP) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
19072367 .. 19075626
3260 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G207300.3

Sequence Viewer

Length: 1119 bp
ATGAGCAACGACAAGGATAGCATGAACATGTCTGATCTCGCCGCTGCTCTGAACGAAGAGGATCGAGCAGGCCTCGTTAACGCTCTCAAGAATAAGATACAGAGTTTGGCCGGGCAGCACTCTGATATCCTCGAGAGTCTCTCTCCTGTAGTCAGAAAGCGTGTTGATGTTCTTAGAGAAATCCAGACCCAACATGATGAATTAGAAGCAAAGTTTTTTGAGGAGAGAGCAGCCCTAGAAGCCAAGTATCAGAAATTGTACCAGCCTTTGTATAGCAAGAGATACGAGATCGTAAATGGTGTTGTTGAAGCTGAAGGAGCTACTACTGAAGCAGCAAATCAAGAGGATAACGCTGCTGAGGAGAAAGGAGTGCCTGATTTCTGGCTCAATGCAATGAAAAACAATGAAGTGCTAGCTGAGGAGATTACTGAGCGTGATGAAGGGGCCCTTAAATATCTTAGGGACATCAAGTGGTTTAGGATAGATAATCCCAAGGGGTTCAAACTTGAGTTCTACTTTGACACCAACCCCTTCTTTAAGAACTCTGTCTTGACAAAGATATATCACATGATAGATGAAGACGAACCCATTCTTGAGAAAGCAATAGGGACGGAGATTGAATGGTATCCGGCAAAATGTTTGACACAGAAGCTCCTTAAGAAGAAGCCTAAGAAGGGATCTAAGAATGCTAAGCCAATCACTAGAACTGAGAATTGCGAAAGCTTCTTCAACTTTTTTAGTCCACCTCAAGTTCCTGAGGACGACGAAGATATTGAGGAAGATGCTGCGGAGGAACTCCAAAACCAGATGGAACAGGATTATGACATTGGGTCTACCATTCGAGATAAGATCATCCCCCATGCTGTTTCATGGTTTACTGGAGAAGCTATCCAGGGAGATGATTTTGGAGACTTGGAAGATGATGAAGACGATGACATTGAAGATCAAGATGATGATGATGAGGATGAAGATGAGGACGAAGATGATGATGAAGATGATGAAGACGAAGATGAAGGCAAAACCAAAAAGAAGACATCAGCTGCTCACAAGAAGAGTGGAAGAGCACAACTTGCGGACGGTCAGCAGGGCGAGCGGCCTCCAGAATGCAAACAGCAGTAG

Protein Analysis

373

Amino Acids

42.6

Weight (kDa)

4.34

Isoelectric Point (pI)

47.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000381)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19480 AT2G19480 AT2G19480 AT4G26110 AT4G26110 AT5G56950
fragaria_vesca FvH4_1g07740 FvH4_1g07740 FvH4_4g08240 FvH4_5g31310 FvH4_6g00310 FvH4_6g00310 FvH4_6g24290 FvH4_6g33640 FvH4_6g33640 FvH4_6g33640 FvH4_6g33640 FvH4_6g33640 FvH4_6g33640 FvH4_6g33640 FvH4_6g33650 FvH4_6g33710 FvH4_6g47360
malus_domestica MD02G1081800.v1.1 MD09G1192000.v1.1 MD15G1209100.v1.1
prunus_persica Prupe.3G048200_v2.0.a1 Prupe.3G048200_v2.0.a1 Prupe.7G207300_v2.0.a1 Prupe.7G207300_v2.0.a1 Prupe.7G207300_v2.0.a1
pyrus_communis pycom02g06460 pycom09g10850 pycom15g18540
rosa_chinensis RchiOBHm_Chr2g0093631 RchiOBHm_Chr2g0143531 RchiOBHm_Chr2g0143541 RchiOBHm_Chr2g0143561 RchiOBHm_Chr3g0453681 RchiOBHm_Chr3g0453701 RchiOBHm_Chr5g0064061
rosa_laevigata RLG00000015834 RLG00000016422 RLG00000020045 RLG00000020046 RLG00000035700
rosa_multiflora Rmu_co8360287.1_g000001 Rmu_sc0002126.1_g000019 Rmu_sc0003547.1_g000009 Rmu_sc0003556.1_g000007 Rmu_sc0003556.1_g000008 Rmu_sc0026989.1_g000002 Rmu_ssc0000231.1_g000007 Rmu_ssc0000239.1_g000004
rosa_roxburghii Rroxscaffold_1G00016760 Rroxscaffold_1G00016790 Rroxscaffold_2G00101660 Rroxscaffold_2G00101720 Rroxscaffold_2G00101740 Rroxscaffold_6G00430600 Rroxscaffold_6G00430620
rosa_rugosa Rorug02G0038100 Rorug02G0383200 Rorug02G0383300 Rorug02G0383400 Rorug02G0383500 Rorug02G0383800 Rorug02G0651100 Rorug02G0651200 Rorug05G0362500
rosa_samantha Rh1BG414000 Rh2AG084600 Rh2AG435400 Rh2AG435500 Rh2AG435700 Rh2AG588700 Rh2BG085200 Rh2BG443000 Rh2BG443100 Rh2BG443200 Rh2BG443300 Rh2CG087500 Rh2CG421500 Rh2CG421600 Rh2CG421800 Rh2DG083200 Rh2DG453500 Rh2DG453600 Rh2DG453700 Rh2DG611000 Rh5AG420500 Rh5AG421100 Rh5BG436400 Rh5CG459100 Rh5CG459300 Rh5DG449900
rosa_wichuraiana Rw2G007100 Rw2G035480 Rw2G035490 Rw2G035500 Rw3G004120 Rw3G004130 Rw5G039620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1093
AccI GTMKAC 1 cut(s) 833
AciI CCGC 4 cut(s) 42, 788, 1073, 1093
AclWI GGATC 2 cut(s) 69, 685
AcoI YGGCCR 1 cut(s) 108
AcuI CTGAAG 2 cut(s) 333, 348
AfaI GTAC 1 cut(s) 260
AfiI CCNNNNNNNGG 1 cut(s) 674
AflII CTTAAG 1 cut(s) 656
AflIII ACRYGT 1 cut(s) 27
AgsI TTSAA 5 cut(s) 308, 502, 620, 730, 941
AhdI GACNNNNNGTC 1 cut(s) 829
AjnI CCWGG 1 cut(s) 891
AluBI AGCT 7 cut(s) 311, 320, 416, 652, 723, 887, 1040
AluI AGCT 7 cut(s) 311, 320, 416, 652, 723, 887, 1040
Alw21I GWGCWC 1 cut(s) 1066
Alw26I GTCTC 2 cut(s) 143, 903
AlwI GGATC 2 cut(s) 69, 685
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 4 cut(s) 70, 108, 444, 1094
ApaI GGGCCC 1 cut(s) 448
ApeKI GCWGC 7 cut(s) 44, 115, 230, 332, 353, 785, 1040
Asp700I GAANNNNTTC 1 cut(s) 588
AspS9I GGNCC 2 cut(s) 444, 445
AsuC2I CCSGG 1 cut(s) 112
AsuNHI GCTAGC 1 cut(s) 412
AvaI CYCGRG 1 cut(s) 131
AxyI CCTNAGG 1 cut(s) 756
BaeGI GKGCMC 1 cut(s) 448
BanII GRGCYC 1 cut(s) 448
BbsI GAAGAC 4 cut(s) 585, 933, 1008, 1037
Bbv12I GWGCWC 1 cut(s) 1066
BbvCI CCTCAGC 2 cut(s) 357, 417
BbvI GCAGC 7 cut(s) 31, 127, 242, 340, 344, 772, 1027
BccI CCATC 1 cut(s) 802
BciT130I CCWGG 1 cut(s) 893
BciVI GTATCC 1 cut(s) 636
BcnI CCSGG 1 cut(s) 112
BcoDI GTCTC 2 cut(s) 143, 903
BfaI CTAG 3 cut(s) 236, 413, 702
BfmI CTRYAG 1 cut(s) 147
BfrI CTTAAG 1 cut(s) 656
BfuI GTATCC 1 cut(s) 636
BisI GCNGC 9 cut(s) 42, 45, 116, 231, 333, 354, 786, 1041, 1094
BlpI GCTNAGC 1 cut(s) 690
BlsI GCNGC 9 cut(s) 43, 46, 117, 232, 334, 355, 787, 1042, 1095
Bme1390I CCNGG 2 cut(s) 112, 893
BmeRI GACNNNNNGTC 1 cut(s) 829
BmeT110I CYCGRG 1 cut(s) 131
BmgT120I GGNCC 2 cut(s) 444, 445
BmiI GGNNCC 2 cut(s) 445, 446
BmrFI CCNGG 2 cut(s) 112, 893
BmsI GCATC 1 cut(s) 772
BmtI GCTAGC 1 cut(s) 416
BpiI GAAGAC 4 cut(s) 585, 933, 1008, 1037
BplI GAGNNNNNCTC 6 cut(s) 57, 89, 125, 157, 127, 159
BpmI CTGGAG 2 cut(s) 900, 1083
Bpu10I CCTNAGC 2 cut(s) 357, 417
Bpu1102I GCTNAGC 1 cut(s) 690
BpuEI CTTGAG 4 cut(s) 71, 527, 614, 732
BpuMI CCSGG 1 cut(s) 112
BsaJI CCNNGG 2 cut(s) 492, 892
BsaXI ACNNNNNCTCC 2 cut(s) 636, 666
Bsc4I CCNNNNNNNGG 1 cut(s) 674
Bse1I ACTGG 1 cut(s) 883
Bse21I CCTNAGG 1 cut(s) 756
Bse3DI GCAATG 1 cut(s) 399
BseBI CCWGG 1 cut(s) 893
BseDI CCNNGG 2 cut(s) 492, 892
BseGI GGATG 2 cut(s) 852, 970
BseLI CCNNNNNNNGG 1 cut(s) 674
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 5 cut(s) 348, 408, 420, 699, 747
BseNI ACTGG 1 cut(s) 883
BseRI GAGGAG 3 cut(s) 236, 374, 434
BseSI GKGCMC 1 cut(s) 448
BseXI GCAGC 7 cut(s) 31, 127, 242, 340, 344, 772, 1027
BshFI GGCC 4 cut(s) 72, 110, 446, 1096
BsiHKAI GWGCWC 1 cut(s) 1066
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 2 cut(s) 111, 629
BslFI GGGAC 2 cut(s) 476, 622
BslI CCNNNNNNNGG 1 cut(s) 674
BsmAI GTCTC 2 cut(s) 143, 903
BsmFI GGGAC 2 cut(s) 476, 622
BsmI GAATGC 2 cut(s) 691, 1109
BsnI GGCC 4 cut(s) 72, 110, 446, 1096
BsoBI CYCGRG 1 cut(s) 131
Bsp120I GGGCCC 1 cut(s) 444
Bsp1286I GDGCHC 2 cut(s) 448, 1066
Bsp143I GATC 6 cut(s) 34, 61, 288, 677, 849, 943
Bsp1720I GCTNAGC 1 cut(s) 690
BspACI CCGC 4 cut(s) 42, 788, 1073, 1093
BspANI GGCC 4 cut(s) 72, 110, 446, 1096
BspCNI CTCAG 5 cut(s) 349, 409, 421, 700, 748
BspLI GGNNCC 2 cut(s) 445, 446
BspOI GCTAGC 1 cut(s) 416
BspPI GGATC 2 cut(s) 69, 685
BspQI GCTCTTC 1 cut(s) 1054
BspTI CTTAAG 1 cut(s) 656
BsrBI CCGCTC 1 cut(s) 1093
BsrDI GCAATG 1 cut(s) 399
BsrI ACTGG 1 cut(s) 883
BssECI CCNNGG 2 cut(s) 492, 892
BssMI GATC 6 cut(s) 34, 61, 288, 677, 849, 943
BssT1I CCWWGG 1 cut(s) 492
Bst2UI CCWGG 1 cut(s) 893
Bst4CI ACNGT 1 cut(s) 1079
Bst6I CTCTTC 3 cut(s) 51, 1046, 1054
BstAFI CTTAAG 1 cut(s) 656
BstAPI GCANNNNNTGC 1 cut(s) 1070
BstC8I GCNNGC 3 cut(s) 70, 414, 1091
BstF5I GGATG 2 cut(s) 852, 970
BstKTI GATC 6 cut(s) 37, 64, 291, 680, 852, 946
BstMAI GTCTC 2 cut(s) 143, 903
BstMBI GATC 6 cut(s) 34, 61, 288, 677, 849, 943
BstMWI GCNNNNNNNGC 4 cut(s) 239, 317, 1070, 1090
BstNI CCWGG 1 cut(s) 893
BstNSI RCATGY 1 cut(s) 31
BstSCI CCNGG 2 cut(s) 110, 891
BstSFI CTRYAG 1 cut(s) 147
BstSLI GKGCMC 1 cut(s) 448
BstV1I GCAGC 7 cut(s) 31, 127, 242, 340, 344, 772, 1027
BstV2I GAAGAC 4 cut(s) 585, 933, 1008, 1037
BstX2I RGATCY 1 cut(s) 677
BstYI RGATCY 1 cut(s) 677
Bsu36I CCTNAGG 1 cut(s) 756
BsuI GTATCC 1 cut(s) 636
BsuRI GGCC 4 cut(s) 72, 110, 446, 1096
BtsCI GGATG 2 cut(s) 852, 970
Cac8I GCNNGC 3 cut(s) 70, 414, 1091
Cfr13I GGNCC 2 cut(s) 444, 445
Csp6I GTAC 1 cut(s) 259
CspCI CAANNNNNGTGG 2 cut(s) 1036, 1071
CviAII CATG 6 cut(s) 22, 28, 194, 568, 860, 870
CviQI GTAC 1 cut(s) 259
DpnI GATC 6 cut(s) 36, 63, 290, 679, 851, 945
DpnII GATC 6 cut(s) 34, 61, 288, 677, 849, 943
DriI GACNNNNNGTC 1 cut(s) 829
EaeI YGGCCR 1 cut(s) 108
Eam1104I CTCTTC 3 cut(s) 51, 1046, 1054
Eam1105I GACNNNNNGTC 1 cut(s) 829
EarI CTCTTC 3 cut(s) 51, 1046, 1054
Eco130I CCWWGG 1 cut(s) 492
Eco147I AGGCCT 1 cut(s) 72
Eco24I GRGCYC 1 cut(s) 448
Eco32I GATATC 1 cut(s) 127
Eco57I CTGAAG 2 cut(s) 333, 348
Eco81I CCTNAGG 1 cut(s) 756
Eco88I CYCGRG 1 cut(s) 131
EcoO109I RGGNCCY 2 cut(s) 444, 445
EcoRII CCWGG 1 cut(s) 891
EcoRV GATATC 1 cut(s) 127
EcoT14I CCWWGG 1 cut(s) 492
EcoT38I GRGCYC 1 cut(s) 448
ErhI CCWWGG 1 cut(s) 492
FaeI CATG 6 cut(s) 25, 31, 197, 571, 863, 873
FaiI YATR 9 cut(s) 23, 29, 195, 273, 562, 569, 822, 861, 871
FalI AAGNNNNNCTT 2 cut(s) 432, 464
FaqI GGGAC 2 cut(s) 476, 622
FatI CATG 6 cut(s) 21, 27, 193, 567, 859, 869
FblI GTMKAC 1 cut(s) 833
Fnu4HI GCNGC 9 cut(s) 42, 45, 116, 231, 333, 354, 786, 1041, 1094
FokI GGATG 2 cut(s) 839, 977
FriOI GRGCYC 1 cut(s) 448
Fsp4HI GCNGC 9 cut(s) 42, 45, 116, 231, 333, 354, 786, 1041, 1094
FspBI CTAG 3 cut(s) 236, 413, 702
GluI GCNGC 9 cut(s) 42, 45, 116, 231, 333, 354, 786, 1041, 1094
GsuI CTGGAG 2 cut(s) 900, 1083
HaeIII GGCC 4 cut(s) 72, 110, 446, 1096
HapII CCGG 2 cut(s) 111, 629
Hin1II CATG 6 cut(s) 25, 31, 197, 571, 863, 873
HincII GTYRAC 1 cut(s) 79
HindII GTYRAC 1 cut(s) 79
HindIII AAGCTT 1 cut(s) 721
HinfI GANTC 1 cut(s) 136
HpaI GTTAAC 1 cut(s) 79
HpaII CCGG 2 cut(s) 111, 629
Hpy166II GTNNAC 4 cut(s) 79, 743, 834, 876
Hpy188I TCNGA 5 cut(s) 34, 51, 124, 155, 252
Hpy8I GTNNAC 4 cut(s) 79, 743, 834, 876
Hpy99I CGWCG 1 cut(s) 767
HpyAV CCTTC 5 cut(s) 308, 434, 541, 667, 1007
HpyCH4III ACNGT 1 cut(s) 1079
HpyCH4V TGCA 2 cut(s) 392, 1107
HpyF10VI GCNNNNNNNGC 4 cut(s) 239, 317, 1070, 1090
Hsp92II CATG 6 cut(s) 25, 31, 197, 571, 863, 873
KspAI GTTAAC 1 cut(s) 79
Kzo9I GATC 6 cut(s) 34, 61, 288, 677, 849, 943
LguI GCTCTTC 1 cut(s) 1054
LmnI GCTCC 2 cut(s) 317, 657
Lsp1109I GCAGC 7 cut(s) 31, 127, 242, 340, 344, 772, 1027
LweI GCATC 1 cut(s) 772
MaeI CTAG 3 cut(s) 236, 413, 702
MalI GATC 6 cut(s) 36, 63, 290, 679, 851, 945
MbiI CCGCTC 1 cut(s) 1093
MboI GATC 6 cut(s) 34, 61, 288, 677, 849, 943
MflI RGATCY 1 cut(s) 677
MhlI GDGCHC 2 cut(s) 448, 1066
MluCI AATT 3 cut(s) 200, 254, 712
MlyI GAGTC 1 cut(s) 145
MroXI GAANNNNTTC 1 cut(s) 588
MseI TTAA 4 cut(s) 78, 450, 537, 657
MslI CAYNNNNRTG 1 cut(s) 26
MspA1I CMGCKG 2 cut(s) 44, 1040
MspCI CTTAAG 1 cut(s) 656
MspI CCGG 2 cut(s) 111, 629
MspR9I CCNGG 2 cut(s) 112, 893
Mva1269I GAATGC 2 cut(s) 691, 1109
MvaI CCWGG 1 cut(s) 893
MwoI GCNNNNNNNGC 4 cut(s) 239, 317, 1070, 1090
NciI CCSGG 1 cut(s) 112
NdeII GATC 6 cut(s) 34, 61, 288, 677, 849, 943
NheI GCTAGC 1 cut(s) 412
NlaIII CATG 6 cut(s) 25, 31, 197, 571, 863, 873
NlaIV GGNNCC 2 cut(s) 445, 446
NspI RCATGY 1 cut(s) 31
PaeR7I CTCGAG 1 cut(s) 131
PceI AGGCCT 1 cut(s) 72
PciI ACATGT 1 cut(s) 27
PciSI GCTCTTC 1 cut(s) 1054
PctI GAATGC 2 cut(s) 691, 1109
PdmI GAANNNNTTC 1 cut(s) 588
PkrI GCNGC 9 cut(s) 43, 46, 117, 232, 334, 355, 787, 1042, 1095
PleI GAGTC 1 cut(s) 144
PpsI GAGTC 1 cut(s) 144
PscI ACATGT 1 cut(s) 27
Psp6I CCWGG 1 cut(s) 891
PspGI CCWGG 1 cut(s) 891
PspN4I GGNNCC 2 cut(s) 445, 446
PspOMI GGGCCC 1 cut(s) 444
PspPI GGNCC 2 cut(s) 444, 445
PsuI RGATCY 1 cut(s) 677
PvuII CAGCTG 1 cut(s) 1040
RsaI GTAC 1 cut(s) 260
RsaNI GTAC 1 cut(s) 259
RseI CAYNNNNRTG 1 cut(s) 26
SapI GCTCTTC 1 cut(s) 1054
SaqAI TTAA 4 cut(s) 78, 450, 537, 657
SatI GCNGC 9 cut(s) 42, 45, 116, 231, 333, 354, 786, 1041, 1094
Sau3AI GATC 6 cut(s) 34, 61, 288, 677, 849, 943
Sau96I GGNCC 2 cut(s) 444, 445
SchI GAGTC 1 cut(s) 145
ScrFI CCNGG 2 cut(s) 112, 893
SduI GDGCHC 2 cut(s) 448, 1066
SetI ASST 8 cut(s) 313, 322, 418, 654, 725, 748, 889, 1042
SfaNI GCATC 1 cut(s) 772
SfcI CTRYAG 1 cut(s) 147
Sfr274I CTCGAG 1 cut(s) 131
SlaI CTCGAG 1 cut(s) 131
SmiMI CAYNNNNRTG 1 cut(s) 26
SmlI CTYRAG 6 cut(s) 86, 131, 506, 593, 656, 747
SmoI CTYRAG 6 cut(s) 86, 131, 506, 593, 656, 747
Sse9I AATT 3 cut(s) 200, 254, 712
SseBI AGGCCT 1 cut(s) 72
SsiI CCGC 4 cut(s) 42, 788, 1073, 1093
SspMI CTAG 3 cut(s) 236, 413, 702
StuI AGGCCT 1 cut(s) 72
StyD4I CCNGG 2 cut(s) 110, 891
StyI CCWWGG 1 cut(s) 492
TaaI ACNGT 1 cut(s) 1079
TaqI TCGA 3 cut(s) 64, 132, 841
TasI AATT 3 cut(s) 200, 254, 712
TauI GCSGC 2 cut(s) 44, 1096
Tru1I TTAA 4 cut(s) 78, 450, 537, 657
Tru9I TTAA 4 cut(s) 78, 450, 537, 657
TseI GCWGC 7 cut(s) 44, 115, 230, 332, 353, 785, 1040
TspGWI ACGGA 1 cut(s) 626
Vha464I CTTAAG 1 cut(s) 656
XceI RCATGY 1 cut(s) 31
XhoI CTCGAG 1 cut(s) 131
XmiI GTMKAC 1 cut(s) 833
XmnI GAANNNNTTC 1 cut(s) 588
XspI CTAG 3 cut(s) 236, 413, 702
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.