Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000381

Physical Location & Seq

Genomic Coordinates Reverse (-)

48912442 .. 48920160

Gene Structure 7719 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0383500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGTCTTTAACGTGTGTGACAATGTCGGAGGACGTCTGGTTAACTTGTATGACTCATGCATTGTCCACCGAGACCGAGGAGATCATGGGCCTCCTTCTTGGTGATATTGAGAACTCTGCAAATGGGGGTGTGACTGCCGTGATTTGGGGAGCATCACCTCAGACTCGATCAGACCGGAGGAAGGATCGTGTTGAAACTAATCCTGAGCAGTTGGCTGCTGCATCAGCTCAAGCCGAAAGAATGACAATATCATCTGGAAGAACAACTAGAGTGATTGGGTGGTACCATTCACATCCTCATATTACGGTTCTTCCTTCCCATGTTGATGTACGGACTCAGGCAATGTATCAACTTCTAGATTCTGGGTTCATCGGGCTGATATTTTCCTGTTTCAGTGAAGATATAAACAAGGTTGGACGAATACAAGTCATTGCCTTTCAGTCCTCAGATGGGAAGCAGCATCACATGTCAAGACCTATATCTTTATCTCCAGTAAATAAAAGTTCAATTATAGAAGTTGACTCGTCTTTAAGTACCTCAGAAAGTGCACCAGTAAGATCTGGCTCGACTAGAGCAGAAGCTGCTGAACAAGACACAGCTGATTCAAGAACTTCTGGAACTATAAAGGCTGGCGGAAGATCTTCAGAACTTGGGCATTTCTTTGCTAGTGCTGAGGCAAATCATCAAGACAGAGAAAGAACCGGAGGGAACTACCCCACAGAAACTTCAGCCAACAATATTGTTGATATAGATCCCATGGATATGTCTGAGAGTATGCAAGAAGCAATGCACCGTTCGAATTTGGATATGAGTGGTGCTGAGTATGTAAGAAAAGAAGTTCCTCTTTATGTTTTACCAACCTCATCTCTTATTAAGCTTGATTCACCTCTAATGTCATTTACGGAATTGCAACGAGTACTGTATGAGGAGGAGCGAGCGGCATATAACCAAGCAATCTTGCAAAATATGAGGGACGGGAAAATGCATCCACTTACTTTCATACATCACACATCAATGTATCAATCTTCCATGTGCAAATTAATCGAATATTGCTTAAGTCCTGCCATAAATGCACTGCAGTGTCGGTTAAGAGAGAATGAAATTCGGTTGGCATTGCTCACTGATGAAGTGAAGGGTTTGGAGAACGAAACACGTAGAGGAAGCGAGTCAAGTTCTGGATCTCCTCGTCAAGTTTTGTCGCCTACACTCCGAGGAAGTGCTCCTTTAGGCCATAGGGACTTGTTCAGTCCAAGGAGTGTAACAGGTCCTGGTAGTCGAAGCAGAAAAGGATCAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0010038 GO:0033554 GO:0034641 GO:0042221 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAP

Protein Analysis

432

Amino Acids

47.46

Weight (kDa)

5.89

Isoelectric Point (pI)

68.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JAB	PF01398	3 - 118	2.8e-18	JAB1/Mov34/MPN/PAD-1 ubiquitin protease
Prok-JAB	PF14464	10 - 113	5.9e-08	Prokaryotic homologs of the JAB domain
BRCC36_C	PF18110	297 - 378	1e-22	BRCC36 C-terminal helical domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000381)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19480 AT2G19480 AT2G19480 AT4G26110 AT4G26110 AT5G56950
fragaria_vesca	FvH4_1g07740 FvH4_1g07740 FvH4_4g08240 FvH4_5g31310 FvH4_6g00310 FvH4_6g00310 FvH4_6g24290 FvH4_6g33640 FvH4_6g33640 FvH4_6g33640 FvH4_6g33640 FvH4_6g33640 FvH4_6g33640 FvH4_6g33640 FvH4_6g33650 FvH4_6g33710 FvH4_6g47360
malus_domestica	MD02G1081800.v1.1 MD09G1192000.v1.1 MD15G1209100.v1.1
prunus_persica	Prupe.3G048200_v2.0.a1 Prupe.3G048200_v2.0.a1 Prupe.7G207300_v2.0.a1 Prupe.7G207300_v2.0.a1 Prupe.7G207300_v2.0.a1
pyrus_communis	pycom02g06460 pycom09g10850 pycom15g18540
rosa_chinensis	RchiOBHm_Chr2g0093631 RchiOBHm_Chr2g0143531 RchiOBHm_Chr2g0143541 RchiOBHm_Chr2g0143561 RchiOBHm_Chr3g0453681 RchiOBHm_Chr3g0453701 RchiOBHm_Chr5g0064061
rosa_laevigata	RLG00000015834 RLG00000016422 RLG00000020045 RLG00000020046 RLG00000035700
rosa_multiflora	Rmu_co8360287.1_g000001 Rmu_sc0002126.1_g000019 Rmu_sc0003547.1_g000009 Rmu_sc0003556.1_g000007 Rmu_sc0003556.1_g000008 Rmu_sc0026989.1_g000002 Rmu_ssc0000231.1_g000007 Rmu_ssc0000239.1_g000004
rosa_roxburghii	Rroxscaffold_1G00016760 Rroxscaffold_1G00016790 Rroxscaffold_2G00101660 Rroxscaffold_2G00101720 Rroxscaffold_2G00101740 Rroxscaffold_6G00430600 Rroxscaffold_6G00430620
rosa_rugosa	Rorug02G0038100 Rorug02G0383200 Rorug02G0383300 Rorug02G0383400 Rorug02G0383500 Rorug02G0383800 Rorug02G0651100 Rorug02G0651200 Rorug05G0362500
rosa_samantha	Rh1BG414000 Rh2AG084600 Rh2AG435400 Rh2AG435500 Rh2AG435700 Rh2AG588700 Rh2BG085200 Rh2BG443000 Rh2BG443100 Rh2BG443200 Rh2BG443300 Rh2CG087500 Rh2CG421500 Rh2CG421600 Rh2CG421800 Rh2DG083200 Rh2DG453500 Rh2DG453600 Rh2DG453700 Rh2DG611000 Rh5AG420500 Rh5AG421100 Rh5BG436400 Rh5CG459100 Rh5CG459300 Rh5DG449900
rosa_wichuraiana	Rw2G007100 Rw2G035480 Rw2G035490 Rw2G035500 Rw3G004120 Rw3G004130 Rw5G039620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	36
Acc65I	GGTACC	1 cut(s)	282
AccB1I	GGYRCC	1 cut(s)	282
AccBSI	CCGCTC	1 cut(s)	938
AciI	CCGC	2 cut(s)	633, 938
AclWI	GGATC	4 cut(s)	192, 746, 1186, 1297
AcsI	RAATTY	2 cut(s)	799, 1101
AcuI	CTGAAG	2 cut(s)	627, 711
AcyI	GRCGYC	1 cut(s)	33
AfaI	GTAC	4 cut(s)	284, 330, 535, 918
AfiI	CCNNNNNNNGG	3 cut(s)	144, 181, 450
AflII	CTTAAG	1 cut(s)	1054
AflIII	ACRYGT	3 cut(s)	11, 465, 1151
AgsI	TTSAA	3 cut(s)	194, 507, 606
AjnI	CCWGG	1 cut(s)	1267
AleI	CACNNNNGTG	1 cut(s)	1078
AluBI	AGCT	4 cut(s)	227, 581, 599, 877
AluI	AGCT	4 cut(s)	227, 581, 599, 877
Alw21I	GWGCWC	2 cut(s)	550, 1222
Alw26I	GTCTC	1 cut(s)	65
Alw44I	GTGCAC	1 cut(s)	546
AlwI	GGATC	4 cut(s)	192, 746, 1186, 1297
AlwNI	CAGNNNCTG	2 cut(s)	581, 1268
AoxI	GGCC	2 cut(s)	88, 1228
ApaLI	GTGCAC	1 cut(s)	546
ApeKI	GCWGC	4 cut(s)	215, 218, 457, 581
ApoI	RAATTY	2 cut(s)	799, 1101
AseI	ATTAAT	1 cut(s)	1040
Asp700I	GAANNNNTTC	1 cut(s)	640
Asp718I	GGTACC	1 cut(s)	282
AspS9I	GGNCC	2 cut(s)	88, 1265
AsuHPI	GGTGA	3 cut(s)	113, 147, 876
AsuII	TTCGAA	1 cut(s)	797
AvaII	GGWCC	1 cut(s)	1265
BaeGI	GKGCMC	1 cut(s)	550
BanI	GGYRCC	1 cut(s)	282
Bbv12I	GWGCWC	2 cut(s)	550, 1222
BbvCI	CCTCAGC	1 cut(s)	672
BbvI	GCAGC	4 cut(s)	202, 205, 469, 568
BccI	CCATC	1 cut(s)	443
BceAI	ACGGC	1 cut(s)	122
BcgI	CGANNNNNNTGC	2 cut(s)	1024, 1058
BciT130I	CCWGG	1 cut(s)	1269
BcoDI	GTCTC	1 cut(s)	65
BfaI	CTAG	4 cut(s)	267, 356, 570, 666
BfmI	CTRYAG	1 cut(s)	1076
BfrI	CTTAAG	1 cut(s)	1054
BglII	AGATCT	2 cut(s)	557, 638
BisI	GCNGC	5 cut(s)	216, 219, 458, 582, 939
BlsI	GCNGC	5 cut(s)	217, 220, 459, 583, 940
BmcAI	AGTACT	1 cut(s)	918
Bme1390I	CCNGG	1 cut(s)	1269
Bme18I	GGWCC	1 cut(s)	1265
BmgT120I	GGNCC	2 cut(s)	88, 1265
BmiI	GGNNCC	1 cut(s)	284
BmrFI	CCNGG	1 cut(s)	1269
BmsI	GCATC	4 cut(s)	161, 230, 469, 994
BpmI	CTGGAG	1 cut(s)	474
Bpu10I	CCTNAGC	2 cut(s)	204, 672
Bpu14I	TTCGAA	1 cut(s)	797
BpuEI	CTTGAG	1 cut(s)	213
BsaAI	YACGTR	1 cut(s)	1154
BsaBI	GATNNNNATC	1 cut(s)	750
BsaHI	GRCGYC	1 cut(s)	33
BsaI	GGTCTC	1 cut(s)	65
BsaJI	CCNNGG	4 cut(s)	75, 756, 1210, 1250
BsaWI	WCCGGW	2 cut(s)	174, 701
Bsc4I	CCNNNNNNNGG	3 cut(s)	144, 181, 450
Bse1I	ACTGG	2 cut(s)	491, 551
Bse3DI	GCAATG	4 cut(s)	348, 429, 792, 1112
Bse8I	GATNNNNATC	1 cut(s)	750
BseBI	CCWGG	1 cut(s)	1269
BseDI	CCNNGG	4 cut(s)	75, 756, 1210, 1250
BseGI	GGATG	2 cut(s)	292, 985
BseJI	GATNNNNATC	1 cut(s)	750
BseLI	CCNNNNNNNGG	3 cut(s)	144, 181, 450
BseMI	GCAATG	4 cut(s)	348, 429, 792, 1112
BseMII	CTCAG	8 cut(s)	173, 195, 350, 459, 552, 663, 759, 810
BseNI	ACTGG	2 cut(s)	491, 551
BseRI	GAGGAG	4 cut(s)	92, 941, 944, 1173
BseSI	GKGCMC	1 cut(s)	550
BseXI	GCAGC	4 cut(s)	202, 205, 469, 568
BshFI	GGCC	2 cut(s)	90, 1230
BshNI	GGYRCC	1 cut(s)	282
BsiHKAI	GWGCWC	2 cut(s)	550, 1222
BsiSI	CCGG	2 cut(s)	175, 702
BslFI	GGGAC	2 cut(s)	986, 1250
BslI	CCNNNNNNNGG	3 cut(s)	144, 181, 450
BsmAI	GTCTC	1 cut(s)	65
BsmFI	GGGAC	2 cut(s)	986, 1250
BsnI	GGCC	2 cut(s)	90, 1230
Bso31I	GGTCTC	1 cut(s)	65
Bsp119I	TTCGAA	1 cut(s)	797
Bsp1286I	GDGCHC	2 cut(s)	550, 1222
Bsp143I	GATC	8 cut(s)	81, 167, 184, 557, 638, 751, 1178, 1289
Bsp19I	CCATGG	1 cut(s)	756
BspACI	CCGC	2 cut(s)	633, 938
BspANI	GGCC	2 cut(s)	90, 1230
BspCNI	CTCAG	8 cut(s)	172, 196, 349, 458, 551, 664, 760, 811
BspLI	GGNNCC	1 cut(s)	284
BspMAI	CTGCAG	1 cut(s)	1080
BspPI	GGATC	4 cut(s)	192, 746, 1186, 1297
BspT104I	TTCGAA	1 cut(s)	797
BspT107I	GGYRCC	1 cut(s)	282
BspTI	CTTAAG	1 cut(s)	1054
BspTNI	GGTCTC	1 cut(s)	65
BsrBI	CCGCTC	1 cut(s)	938
BsrDI	GCAATG	4 cut(s)	348, 429, 792, 1112
BsrI	ACTGG	2 cut(s)	491, 551
BssECI	CCNNGG	4 cut(s)	75, 756, 1210, 1250
BssMI	GATC	8 cut(s)	81, 167, 184, 557, 638, 751, 1178, 1289
BssNI	GRCGYC	1 cut(s)	33
BssT1I	CCWWGG	2 cut(s)	756, 1250
Bst2UI	CCWGG	1 cut(s)	1269
Bst4CI	ACNGT	3 cut(s)	307, 794, 921
BstACI	GRCGYC	1 cut(s)	33
BstAFI	CTTAAG	1 cut(s)	1054
BstAPI	GCANNNNNTGC	1 cut(s)	581
BstBAI	YACGTR	1 cut(s)	1154
BstBI	TTCGAA	1 cut(s)	797
BstC8I	GCNNGC	2 cut(s)	631, 936
BstDEI	CTNAG	8 cut(s)	159, 204, 336, 445, 538, 672, 768, 819
BstDSI	CCRYGG	1 cut(s)	756
BstF5I	GGATG	2 cut(s)	292, 985
BstKTI	GATC	8 cut(s)	84, 170, 187, 560, 641, 754, 1181, 1292
BstMAI	GTCTC	1 cut(s)	65
BstMBI	GATC	8 cut(s)	81, 167, 184, 557, 638, 751, 1178, 1289
BstMWI	GCNNNNNNNGC	3 cut(s)	224, 581, 1070
BstNI	CCWGG	1 cut(s)	1269
BstNSI	RCATGY	1 cut(s)	469
BstSCI	CCNGG	1 cut(s)	1267
BstSFI	CTRYAG	1 cut(s)	1076
BstSLI	GKGCMC	1 cut(s)	550
BstV1I	GCAGC	4 cut(s)	202, 205, 469, 568
BstX2I	RGATCY	4 cut(s)	557, 638, 751, 1178
BstYI	RGATCY	4 cut(s)	557, 638, 751, 1178
BsuRI	GGCC	2 cut(s)	90, 1230
BtgI	CCRYGG	1 cut(s)	756
BtsCI	GGATG	2 cut(s)	292, 985
BtsI	GCAGTG	2 cut(s)	1073, 1085
BtsIMutI	CAGTG	4 cut(s)	400, 1073, 1085, 1119
Cac8I	GCNNGC	2 cut(s)	631, 936
CaiI	CAGNNNCTG	2 cut(s)	581, 1268
Cfr13I	GGNCC	2 cut(s)	88, 1265
Csp6I	GTAC	4 cut(s)	283, 329, 534, 917
CviAII	CATG	6 cut(s)	56, 85, 320, 466, 757, 1030
CviQI	GTAC	4 cut(s)	283, 329, 534, 917
DdeI	CTNAG	8 cut(s)	159, 204, 336, 445, 538, 672, 768, 819
DpnI	GATC	8 cut(s)	83, 169, 186, 559, 640, 753, 1180, 1291
DpnII	GATC	8 cut(s)	81, 167, 184, 557, 638, 751, 1178, 1289
EciI	GGCGGA	1 cut(s)	648
Eco130I	CCWWGG	2 cut(s)	756, 1250
Eco31I	GGTCTC	1 cut(s)	65
Eco47I	GGWCC	1 cut(s)	1265
Eco57I	CTGAAG	2 cut(s)	627, 711
EcoO109I	RGGNCCY	1 cut(s)	1265
EcoRII	CCWGG	1 cut(s)	1267
EcoT14I	CCWWGG	2 cut(s)	756, 1250
EcoT22I	ATGCAT	2 cut(s)	61, 987
ErhI	CCWWGG	2 cut(s)	756, 1250
FaeI	CATG	6 cut(s)	59, 88, 323, 469, 760, 1033
FalI	AAGNNNNNCTT	4 cut(s)	828, 860, 1207, 1239
FaqI	GGGAC	2 cut(s)	986, 1250
FatI	CATG	6 cut(s)	55, 84, 319, 465, 756, 1029
Fnu4HI	GCNGC	5 cut(s)	216, 219, 458, 582, 939
FokI	GGATG	2 cut(s)	279, 972
Fsp4HI	GCNGC	5 cut(s)	216, 219, 458, 582, 939
FspBI	CTAG	4 cut(s)	267, 356, 570, 666
GluI	GCNGC	5 cut(s)	216, 219, 458, 582, 939
GsuI	CTGGAG	1 cut(s)	474
HaeIII	GGCC	2 cut(s)	90, 1230
HapII	CCGG	2 cut(s)	175, 702
Hin1I	GRCGYC	1 cut(s)	33
Hin1II	CATG	6 cut(s)	59, 88, 323, 469, 760, 1033
HincII	GTYRAC	2 cut(s)	42, 520
HindII	GTYRAC	2 cut(s)	42, 520
HindIII	AAGCTT	1 cut(s)	875
HinfI	GANTC	8 cut(s)	52, 163, 334, 359, 521, 602, 881, 1166
HpaI	GTTAAC	1 cut(s)	42
HpaII	CCGG	2 cut(s)	175, 702
HphI	GGTGA	3 cut(s)	113, 147, 876
Hpy166II	GTNNAC	4 cut(s)	42, 66, 520, 548
Hpy188I	TCNGA	8 cut(s)	28, 162, 172, 448, 541, 646, 769, 1211
Hpy188III	TCNNGA	8 cut(s)	203, 255, 356, 471, 606, 615, 686, 1176
Hpy8I	GTNNAC	4 cut(s)	42, 66, 520, 548
HpyAV	CCTTC	4 cut(s)	104, 175, 324, 1126
HpyCH4III	ACNGT	3 cut(s)	307, 794, 921
HpyCH4IV	ACGT	3 cut(s)	11, 33, 1153
HpyF10VI	GCNNNNNNNGC	3 cut(s)	224, 581, 1070
HpyF3I	CTNAG	8 cut(s)	159, 204, 336, 445, 538, 672, 768, 819
HpySE526I	ACGT	3 cut(s)	11, 33, 1153
Hsp92I	GRCGYC	1 cut(s)	33
Hsp92II	CATG	6 cut(s)	59, 88, 323, 469, 760, 1033
KpnI	GGTACC	1 cut(s)	286
KspAI	GTTAAC	1 cut(s)	42
Kzo9I	GATC	8 cut(s)	81, 167, 184, 557, 638, 751, 1178, 1289
LmnI	GCTCC	3 cut(s)	149, 931, 1225
Lsp1109I	GCAGC	4 cut(s)	202, 205, 469, 568
LweI	GCATC	4 cut(s)	161, 230, 469, 994
MaeI	CTAG	4 cut(s)	267, 356, 570, 666
MaeII	ACGT	3 cut(s)	11, 33, 1153
MaeIII	GTNAC	3 cut(s)	16, 130, 1258
MalI	GATC	8 cut(s)	83, 169, 186, 559, 640, 753, 1180, 1291
MbiI	CCGCTC	1 cut(s)	938
MboI	GATC	8 cut(s)	81, 167, 184, 557, 638, 751, 1178, 1289
MboII	GAAGA	6 cut(s)	270, 302, 410, 633, 648, 1017
MflI	RGATCY	4 cut(s)	557, 638, 751, 1178
MhlI	GDGCHC	2 cut(s)	550, 1222
MluCI	AATT	5 cut(s)	507, 799, 905, 1037, 1101
MlyI	GAGTC	5 cut(s)	46, 157, 328, 515, 1175
MmeI	TCCRAC	2 cut(s)	6, 394
Mph1103I	ATGCAT	2 cut(s)	61, 987
MroXI	GAANNNNTTC	1 cut(s)	640
MseI	TTAA	7 cut(s)	8, 41, 530, 873, 1040, 1055, 1088
MslI	CAYNNNNRTG	4 cut(s)	324, 761, 1013, 1078
MspA1I	CMGCKG	1 cut(s)	599
MspCI	CTTAAG	1 cut(s)	1054
MspI	CCGG	2 cut(s)	175, 702
MspR9I	CCNGG	1 cut(s)	1269
MvaI	CCWGG	1 cut(s)	1269
MwoI	GCNNNNNNNGC	3 cut(s)	224, 581, 1070
NcoI	CCATGG	1 cut(s)	756
NdeII	GATC	8 cut(s)	81, 167, 184, 557, 638, 751, 1178, 1289
NlaIII	CATG	6 cut(s)	59, 88, 323, 469, 760, 1033
NlaIV	GGNNCC	1 cut(s)	284
NmuCI	GTSAC	2 cut(s)	16, 130
NsiI	ATGCAT	2 cut(s)	61, 987
NspI	RCATGY	1 cut(s)	469
NspV	TTCGAA	1 cut(s)	797
OliI	CACNNNNGTG	1 cut(s)	1078
PciI	ACATGT	1 cut(s)	465
PdmI	GAANNNNTTC	1 cut(s)	640
PfeI	GAWTC	3 cut(s)	359, 602, 881
PflFI	GACNNNGTC	1 cut(s)	22
PkrI	GCNGC	5 cut(s)	217, 220, 459, 583, 940
PleI	GAGTC	5 cut(s)	46, 157, 328, 515, 1174
PpsI	GAGTC	5 cut(s)	46, 157, 328, 515, 1174
Ppu21I	YACGTR	1 cut(s)	1154
PpuMI	RGGWCCY	1 cut(s)	1265
PscI	ACATGT	1 cut(s)	465
PshBI	ATTAAT	1 cut(s)	1040
Psp5II	RGGWCCY	1 cut(s)	1265
Psp6I	CCWGG	1 cut(s)	1267
PspGI	CCWGG	1 cut(s)	1267
PspN4I	GGNNCC	1 cut(s)	284
PspPI	GGNCC	2 cut(s)	88, 1265
PspPPI	RGGWCCY	1 cut(s)	1265
PstI	CTGCAG	1 cut(s)	1080
PstNI	CAGNNNCTG	2 cut(s)	581, 1268
PsuI	RGATCY	4 cut(s)	557, 638, 751, 1178
PsyI	GACNNNGTC	1 cut(s)	22
PvuII	CAGCTG	1 cut(s)	599
RsaI	GTAC	4 cut(s)	284, 330, 535, 918
RsaNI	GTAC	4 cut(s)	283, 329, 534, 917
RseI	CAYNNNNRTG	4 cut(s)	324, 761, 1013, 1078
SaqAI	TTAA	7 cut(s)	8, 41, 530, 873, 1040, 1055, 1088
SatI	GCNGC	5 cut(s)	216, 219, 458, 582, 939
Sau3AI	GATC	8 cut(s)	81, 167, 184, 557, 638, 751, 1178, 1289
Sau96I	GGNCC	2 cut(s)	88, 1265
ScaI	AGTACT	1 cut(s)	918
SchI	GAGTC	5 cut(s)	46, 157, 328, 515, 1175
ScrFI	CCNGG	1 cut(s)	1269
SduI	GDGCHC	2 cut(s)	550, 1222
SfaNI	GCATC	4 cut(s)	161, 230, 469, 994
SfcI	CTRYAG	1 cut(s)	1076
SfuI	TTCGAA	1 cut(s)	797
SinI	GGWCC	1 cut(s)	1265
SmiMI	CAYNNNNRTG	4 cut(s)	324, 761, 1013, 1078
SmlI	CTYRAG	2 cut(s)	228, 1054
SmoI	CTYRAG	2 cut(s)	228, 1054
Sse9I	AATT	5 cut(s)	507, 799, 905, 1037, 1101
SsiI	CCGC	2 cut(s)	633, 938
SspI	AATATT	2 cut(s)	739, 1049
SspMI	CTAG	4 cut(s)	267, 356, 570, 666
StyD4I	CCNGG	1 cut(s)	1267
StyI	CCWWGG	2 cut(s)	756, 1250
TaaI	ACNGT	3 cut(s)	307, 794, 921
TaiI	ACGT	3 cut(s)	14, 36, 1156
TaqI	TCGA	5 cut(s)	166, 566, 797, 1044, 1276
TaqII	GACCGA	1 cut(s)	89
TasI	AATT	5 cut(s)	507, 799, 905, 1037, 1101
TatI	WGTACW	1 cut(s)	916
TauI	GCSGC	1 cut(s)	941
TfiI	GAWTC	3 cut(s)	359, 602, 881
Tru1I	TTAA	7 cut(s)	8, 41, 530, 873, 1040, 1055, 1088
Tru9I	TTAA	7 cut(s)	8, 41, 530, 873, 1040, 1055, 1088
TscAI	CASTG	4 cut(s)	400, 1080, 1085, 1126
TseFI	GTSAC	2 cut(s)	16, 130
TseI	GCWGC	4 cut(s)	215, 218, 457, 581
Tsp45I	GTSAC	2 cut(s)	16, 130
TspDTI	ATGAA	4 cut(s)	358, 988, 1113, 1140
TspGWI	ACGGA	2 cut(s)	346, 917
TspRI	CASTG	4 cut(s)	400, 1080, 1085, 1126
Tth111I	GACNNNGTC	1 cut(s)	22
Vha464I	CTTAAG	1 cut(s)	1054
VneI	GTGCAC	1 cut(s)	546
VpaK11BI	GGWCC	1 cut(s)	1265
VspI	ATTAAT	1 cut(s)	1040
XapI	RAATTY	2 cut(s)	799, 1101
XbaI	TCTAGA	1 cut(s)	355
XceI	RCATGY	1 cut(s)	469
XmnI	GAANNNNTTC	1 cut(s)	640
XspI	CTAG	4 cut(s)	267, 356, 570, 666
ZraI	GACGTC	1 cut(s)	34
ZrmI	AGTACT	1 cut(s)	918
Zsp2I	ATGCAT	2 cut(s)	61, 987

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.