Nucleosome assembly protein (NAP)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 546 |
| Acc16I | TGCGCA | 2 cut(s) | 1053, 1395 |
| AccI | GTMKAC | 2 cut(s) | 471, 949 |
| AccII | CGCG | 3 cut(s) | 560, 576, 1026 |
| AciI | CCGC | 1 cut(s) | 100 |
| AcoI | YGGCCR | 1 cut(s) | 1194 |
| AcsI | RAATTY | 1 cut(s) | 787 |
| AcuI | CTGAAG | 1 cut(s) | 620 |
| AfaI | GTAC | 2 cut(s) | 38, 533 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1087 |
| AflII | CTTAAG | 1 cut(s) | 590 |
| AjnI | CCWGG | 2 cut(s) | 274, 1298 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 428, 460 |
| Alw21I | GWGCWC | 1 cut(s) | 1421 |
| Alw26I | GTCTC | 3 cut(s) | 500, 981, 1170 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1382 |
| AoxI | GGCC | 1 cut(s) | 1194 |
| ApeKI | GCWGC | 6 cut(s) | 661, 1376, 1379, 1388, 1391, 1475 |
| ApoI | RAATTY | 1 cut(s) | 787 |
| AspLEI | GCGC | 4 cut(s) | 576, 798, 1054, 1396 |
| AspS9I | GGNCC | 1 cut(s) | 1356 |
| AsuC2I | CCSGG | 1 cut(s) | 253 |
| AsuHPI | GGTGA | 1 cut(s) | 317 |
| AvaII | GGWCC | 1 cut(s) | 1356 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 578, 611 |
| BalI | TGGCCA | 1 cut(s) | 1196 |
| BanII | GRGCYC | 1 cut(s) | 1421 |
| BbsI | GAAGAC | 1 cut(s) | 119 |
| Bbv12I | GWGCWC | 1 cut(s) | 1421 |
| BbvI | GCAGC | 5 cut(s) | 673, 1366, 1375, 1378, 1388 |
| BccI | CCATC | 2 cut(s) | 250, 1447 |
| BciT130I | CCWGG | 2 cut(s) | 276, 1300 |
| BcnI | CCSGG | 1 cut(s) | 253 |
| BcoDI | GTCTC | 3 cut(s) | 500, 981, 1170 |
| BfaI | CTAG | 3 cut(s) | 510, 929, 1269 |
| BfmI | CTRYAG | 1 cut(s) | 1136 |
| BfoI | RGCGCY | 1 cut(s) | 799 |
| BfrI | CTTAAG | 1 cut(s) | 590 |
| BisI | GCNGC | 6 cut(s) | 662, 1377, 1380, 1389, 1392, 1476 |
| BlsI | GCNGC | 6 cut(s) | 663, 1378, 1381, 1390, 1393, 1477 |
| BmcAI | AGTACT | 1 cut(s) | 533 |
| Bme1390I | CCNGG | 3 cut(s) | 253, 276, 1300 |
| Bme18I | GGWCC | 1 cut(s) | 1356 |
| BmgT120I | GGNCC | 1 cut(s) | 1356 |
| BmrFI | CCNGG | 3 cut(s) | 253, 276, 1300 |
| BmrI | ACTGGG | 1 cut(s) | 729 |
| BmsI | GCATC | 5 cut(s) | 280, 487, 748, 1375, 1456 |
| BmuI | ACTGGG | 1 cut(s) | 729 |
| BpiI | GAAGAC | 1 cut(s) | 119 |
| BpmI | CTGGAG | 1 cut(s) | 791 |
| Bpu10I | CCTNAGC | 1 cut(s) | 800 |
| BpuEI | CTTGAG | 1 cut(s) | 1152 |
| BpuMI | CCSGG | 1 cut(s) | 253 |
| BsaBI | GATNNNNATC | 4 cut(s) | 260, 864, 882, 924 |
| BsaJI | CCNNGG | 2 cut(s) | 275, 1299 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 251, 281, 764, 794 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1087 |
| Bse1I | ACTGG | 4 cut(s) | 724, 1352, 1359, 1433 |
| Bse8I | GATNNNNATC | 4 cut(s) | 260, 864, 882, 924 |
| BseBI | CCWGG | 2 cut(s) | 276, 1300 |
| BseDI | CCNNGG | 2 cut(s) | 275, 1299 |
| BseGI | GGATG | 5 cut(s) | 261, 271, 638, 883, 1439 |
| BseJI | GATNNNNATC | 4 cut(s) | 260, 864, 882, 924 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1087 |
| BseMII | CTCAG | 2 cut(s) | 479, 791 |
| BseNI | ACTGG | 4 cut(s) | 724, 1352, 1359, 1433 |
| BseRI | GAGGAG | 2 cut(s) | 1166, 1204 |
| BseXI | GCAGC | 5 cut(s) | 673, 1366, 1375, 1378, 1388 |
| Bsh1236I | CGCG | 3 cut(s) | 560, 576, 1026 |
| BshFI | GGCC | 1 cut(s) | 1196 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1421 |
| BsiSI | CCGG | 1 cut(s) | 252 |
| BslFI | GGGAC | 4 cut(s) | 316, 419, 1192, 1197 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1087 |
| BsmAI | GTCTC | 3 cut(s) | 500, 981, 1170 |
| BsmFI | GGGAC | 4 cut(s) | 316, 419, 1192, 1197 |
| BsnI | GGCC | 1 cut(s) | 1196 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1421 |
| Bsp143I | GATC | 4 cut(s) | 261, 564, 1069, 1311 |
| BspACI | CCGC | 1 cut(s) | 100 |
| BspANI | GGCC | 1 cut(s) | 1196 |
| BspCNI | CTCAG | 2 cut(s) | 480, 792 |
| BspFNI | CGCG | 3 cut(s) | 560, 576, 1026 |
| BspHI | TCATGA | 1 cut(s) | 916 |
| BspMAI | CTGCAG | 1 cut(s) | 1140 |
| BspTI | CTTAAG | 1 cut(s) | 590 |
| BsrI | ACTGG | 4 cut(s) | 724, 1352, 1359, 1433 |
| BssECI | CCNNGG | 2 cut(s) | 275, 1299 |
| BssMI | GATC | 4 cut(s) | 261, 564, 1069, 1311 |
| BssNAI | GTATAC | 1 cut(s) | 472 |
| Bst1107I | GTATAC | 1 cut(s) | 472 |
| Bst2UI | CCWGG | 2 cut(s) | 276, 1300 |
| Bst4CI | ACNGT | 2 cut(s) | 36, 1410 |
| Bst6I | CTCTTC | 1 cut(s) | 576 |
| BstAFI | CTTAAG | 1 cut(s) | 590 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 484 |
| BstC8I | GCNNGC | 1 cut(s) | 1140 |
| BstDEI | CTNAG | 3 cut(s) | 192, 488, 800 |
| BstF5I | GGATG | 5 cut(s) | 261, 271, 638, 883, 1439 |
| BstFNI | CGCG | 3 cut(s) | 560, 576, 1026 |
| BstH2I | RGCGCY | 1 cut(s) | 799 |
| BstHHI | GCGC | 4 cut(s) | 576, 798, 1054, 1396 |
| BstKTI | GATC | 4 cut(s) | 264, 567, 1072, 1314 |
| BstMAI | GTCTC | 3 cut(s) | 500, 981, 1170 |
| BstMBI | GATC | 4 cut(s) | 261, 564, 1069, 1311 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 347, 484, 1376, 1385, 1388, 1400, 1475 |
| BstNI | CCWGG | 2 cut(s) | 276, 1300 |
| BstSCI | CCNGG | 3 cut(s) | 251, 274, 1298 |
| BstSFI | CTRYAG | 1 cut(s) | 1136 |
| BstUI | CGCG | 3 cut(s) | 560, 576, 1026 |
| BstV1I | GCAGC | 5 cut(s) | 673, 1366, 1375, 1378, 1388 |
| BstV2I | GAAGAC | 1 cut(s) | 119 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1180 |
| BstZ17I | GTATAC | 1 cut(s) | 472 |
| BsuRI | GGCC | 1 cut(s) | 1196 |
| BtgZI | GCGATG | 1 cut(s) | 591 |
| BtsCI | GGATG | 5 cut(s) | 261, 271, 638, 883, 1439 |
| BtsIMutI | CAGTG | 1 cut(s) | 1406 |
| Cac8I | GCNNGC | 1 cut(s) | 1140 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1382 |
| CciI | TCATGA | 1 cut(s) | 916 |
| CfoI | GCGC | 4 cut(s) | 576, 798, 1054, 1396 |
| Cfr13I | GGNCC | 1 cut(s) | 1356 |
| Csp6I | GTAC | 2 cut(s) | 37, 532 |
| CviAII | CATG | 4 cut(s) | 743, 917, 1004, 1485 |
| CviQI | GTAC | 2 cut(s) | 37, 532 |
| DdeI | CTNAG | 3 cut(s) | 192, 488, 800 |
| DpnI | GATC | 4 cut(s) | 263, 566, 1071, 1313 |
| DpnII | GATC | 4 cut(s) | 261, 564, 1069, 1311 |
| DraI | TTTAAA | 1 cut(s) | 175 |
| EaeI | YGGCCR | 1 cut(s) | 1194 |
| Eam1104I | CTCTTC | 1 cut(s) | 576 |
| EarI | CTCTTC | 1 cut(s) | 576 |
| Ecl136II | GAGCTC | 1 cut(s) | 1419 |
| Eco24I | GRGCYC | 1 cut(s) | 1421 |
| Eco32I | GATATC | 1 cut(s) | 607 |
| Eco47I | GGWCC | 1 cut(s) | 1356 |
| Eco53kI | GAGCTC | 1 cut(s) | 1419 |
| Eco57I | CTGAAG | 1 cut(s) | 620 |
| EcoICRI | GAGCTC | 1 cut(s) | 1419 |
| EcoRI | GAATTC | 1 cut(s) | 787 |
| EcoRII | CCWGG | 2 cut(s) | 274, 1298 |
| EcoRV | GATATC | 1 cut(s) | 607 |
| EcoT38I | GRGCYC | 1 cut(s) | 1421 |
| FaeI | CATG | 4 cut(s) | 746, 920, 1007, 1488 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 573, 605, 1161, 1193 |
| FaqI | GGGAC | 4 cut(s) | 316, 419, 1192, 1197 |
| FatI | CATG | 4 cut(s) | 742, 916, 1003, 1484 |
| FauI | CCCGC | 1 cut(s) | 93 |
| FblI | GTMKAC | 2 cut(s) | 471, 949 |
| Fnu4HI | GCNGC | 6 cut(s) | 662, 1377, 1380, 1389, 1392, 1476 |
| FokI | GGATG | 5 cut(s) | 258, 268, 645, 870, 1426 |
| FriOI | GRGCYC | 1 cut(s) | 1421 |
| Fsp4HI | GCNGC | 6 cut(s) | 662, 1377, 1380, 1389, 1392, 1476 |
| FspBI | CTAG | 3 cut(s) | 510, 929, 1269 |
| FspI | TGCGCA | 2 cut(s) | 1053, 1395 |
| GlaI | GCGC | 4 cut(s) | 575, 797, 1053, 1395 |
| GluI | GCNGC | 6 cut(s) | 662, 1377, 1380, 1389, 1392, 1476 |
| GsuI | CTGGAG | 1 cut(s) | 791 |
| HaeII | RGCGCY | 1 cut(s) | 799 |
| HaeIII | GGCC | 1 cut(s) | 1196 |
| HapII | CCGG | 1 cut(s) | 252 |
| HhaI | GCGC | 4 cut(s) | 576, 798, 1054, 1396 |
| Hin1II | CATG | 4 cut(s) | 746, 920, 1007, 1488 |
| Hin6I | GCGC | 4 cut(s) | 574, 796, 1052, 1394 |
| HinP1I | GCGC | 4 cut(s) | 574, 796, 1052, 1394 |
| HincII | GTYRAC | 1 cut(s) | 1345 |
| HindII | GTYRAC | 1 cut(s) | 1345 |
| HindIII | AAGCTT | 2 cut(s) | 283, 764 |
| HinfI | GANTC | 6 cut(s) | 188, 344, 1163, 1185, 1274, 1432 |
| HpaI | GTTAAC | 1 cut(s) | 1345 |
| HpaII | CCGG | 1 cut(s) | 252 |
| HphI | GGTGA | 1 cut(s) | 317 |
| Hpy166II | GTNNAC | 4 cut(s) | 472, 950, 1020, 1345 |
| Hpy188I | TCNGA | 5 cut(s) | 505, 600, 793, 1311, 1465 |
| Hpy8I | GTNNAC | 4 cut(s) | 472, 950, 1020, 1345 |
| HpyAV | CCTTC | 3 cut(s) | 595, 623, 1031 |
| HpyCH4III | ACNGT | 2 cut(s) | 36, 1410 |
| HpyCH4IV | ACGT | 1 cut(s) | 106 |
| HpyCH4V | TGCA | 6 cut(s) | 387, 442, 1007, 1138, 1292, 1475 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 347, 484, 1376, 1385, 1388, 1400, 1475 |
| HpyF3I | CTNAG | 3 cut(s) | 192, 488, 800 |
| HpySE526I | ACGT | 1 cut(s) | 106 |
| Hsp92II | CATG | 4 cut(s) | 746, 920, 1007, 1488 |
| HspAI | GCGC | 4 cut(s) | 574, 796, 1052, 1394 |
| KspAI | GTTAAC | 1 cut(s) | 1345 |
| Kzo9I | GATC | 4 cut(s) | 261, 564, 1069, 1311 |
| LmnI | GCTCC | 2 cut(s) | 373, 1483 |
| Lsp1109I | GCAGC | 5 cut(s) | 673, 1366, 1375, 1378, 1388 |
| LweI | GCATC | 5 cut(s) | 280, 487, 748, 1375, 1456 |
| MaeI | CTAG | 3 cut(s) | 510, 929, 1269 |
| MaeII | ACGT | 1 cut(s) | 106 |
| MaeIII | GTNAC | 2 cut(s) | 238, 305 |
| MalI | GATC | 4 cut(s) | 263, 566, 1071, 1313 |
| MboI | GATC | 4 cut(s) | 261, 564, 1069, 1311 |
| MboII | GAAGA | 8 cut(s) | 124, 307, 574, 593, 796, 814, 1169, 1329 |
| MhlI | GDGCHC | 1 cut(s) | 1421 |
| MlsI | TGGCCA | 1 cut(s) | 1196 |
| MluCI | AATT | 7 cut(s) | 120, 146, 399, 787, 955, 996, 1190 |
| MluNI | TGGCCA | 1 cut(s) | 1196 |
| MlyI | GAGTC | 3 cut(s) | 338, 1172, 1179 |
| MmeI | TCCRAC | 2 cut(s) | 624, 1392 |
| Mox20I | TGGCCA | 1 cut(s) | 1196 |
| MscI | TGGCCA | 1 cut(s) | 1196 |
| MseI | TTAA | 6 cut(s) | 174, 327, 591, 618, 834, 1344 |
| Msp20I | TGGCCA | 1 cut(s) | 1196 |
| MspA1I | CMGCKG | 2 cut(s) | 100, 1379 |
| MspCI | CTTAAG | 1 cut(s) | 590 |
| MspI | CCGG | 1 cut(s) | 252 |
| MspR9I | CCNGG | 3 cut(s) | 253, 276, 1300 |
| MvaI | CCWGG | 2 cut(s) | 276, 1300 |
| MvnI | CGCG | 3 cut(s) | 560, 576, 1026 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 347, 484, 1376, 1385, 1388, 1400, 1475 |
| NciI | CCSGG | 1 cut(s) | 253 |
| NdeII | GATC | 4 cut(s) | 261, 564, 1069, 1311 |
| NlaIII | CATG | 4 cut(s) | 746, 920, 1007, 1488 |
| NmuCI | GTSAC | 2 cut(s) | 238, 305 |
| NsbI | TGCGCA | 2 cut(s) | 1053, 1395 |
| PagI | TCATGA | 1 cut(s) | 916 |
| PfeI | GAWTC | 3 cut(s) | 188, 1274, 1432 |
| PkrI | GCNGC | 6 cut(s) | 663, 1378, 1381, 1390, 1393, 1477 |
| PleI | GAGTC | 3 cut(s) | 338, 1171, 1179 |
| PpsI | GAGTC | 3 cut(s) | 338, 1171, 1179 |
| PsiI | TTATAA | 1 cut(s) | 546 |
| Psp124BI | GAGCTC | 1 cut(s) | 1421 |
| Psp6I | CCWGG | 2 cut(s) | 274, 1298 |
| PspGI | CCWGG | 2 cut(s) | 274, 1298 |
| PspPI | GGNCC | 1 cut(s) | 1356 |
| PstI | CTGCAG | 1 cut(s) | 1140 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1382 |
| PvuII | CAGCTG | 1 cut(s) | 1379 |
| RsaI | GTAC | 2 cut(s) | 38, 533 |
| RsaNI | GTAC | 2 cut(s) | 37, 532 |
| SacI | GAGCTC | 1 cut(s) | 1421 |
| SaqAI | TTAA | 6 cut(s) | 174, 327, 591, 618, 834, 1344 |
| SatI | GCNGC | 6 cut(s) | 662, 1377, 1380, 1389, 1392, 1476 |
| Sau3AI | GATC | 4 cut(s) | 261, 564, 1069, 1311 |
| Sau96I | GGNCC | 1 cut(s) | 1356 |
| ScaI | AGTACT | 1 cut(s) | 533 |
| SchI | GAGTC | 3 cut(s) | 338, 1172, 1179 |
| ScrFI | CCNGG | 3 cut(s) | 253, 276, 1300 |
| SduI | GDGCHC | 1 cut(s) | 1421 |
| SfaNI | GCATC | 5 cut(s) | 280, 487, 748, 1375, 1456 |
| SfcI | CTRYAG | 1 cut(s) | 1136 |
| SinI | GGWCC | 1 cut(s) | 1356 |
| SmlI | CTYRAG | 2 cut(s) | 590, 1167 |
| SmoI | CTYRAG | 2 cut(s) | 590, 1167 |
| Sse9I | AATT | 7 cut(s) | 120, 146, 399, 787, 955, 996, 1190 |
| SsiI | CCGC | 1 cut(s) | 100 |
| SspI | AATATT | 2 cut(s) | 500, 981 |
| SspMI | CTAG | 3 cut(s) | 510, 929, 1269 |
| SstI | GAGCTC | 1 cut(s) | 1421 |
| StyD4I | CCNGG | 3 cut(s) | 251, 274, 1298 |
| TaaI | ACNGT | 2 cut(s) | 36, 1410 |
| TaiI | ACGT | 1 cut(s) | 109 |
| TaqI | TCGA | 3 cut(s) | 264, 782, 985 |
| TasI | AATT | 7 cut(s) | 120, 146, 399, 787, 955, 996, 1190 |
| TatI | WGTACW | 2 cut(s) | 36, 531 |
| TfiI | GAWTC | 3 cut(s) | 188, 1274, 1432 |
| Tru1I | TTAA | 6 cut(s) | 174, 327, 591, 618, 834, 1344 |
| Tru9I | TTAA | 6 cut(s) | 174, 327, 591, 618, 834, 1344 |
| TscAI | CASTG | 1 cut(s) | 1413 |
| TseFI | GTSAC | 2 cut(s) | 238, 305 |
| TseI | GCWGC | 6 cut(s) | 661, 1376, 1379, 1388, 1391, 1475 |
| Tsp45I | GTSAC | 2 cut(s) | 238, 305 |
| TspDTI | ATGAA | 8 cut(s) | 119, 594, 642, 876, 894, 915, 936, 1439 |
| TspGWI | ACGGA | 2 cut(s) | 131, 839 |
| TspRI | CASTG | 1 cut(s) | 1413 |
| Vha464I | CTTAAG | 1 cut(s) | 590 |
| VpaK11BI | GGWCC | 1 cut(s) | 1356 |
| XapI | RAATTY | 1 cut(s) | 787 |
| XmiI | GTMKAC | 2 cut(s) | 471, 949 |
| XspI | CTAG | 3 cut(s) | 510, 929, 1269 |
| ZrmI | AGTACT | 1 cut(s) | 533 |