pycom13g20790

F-box protein At5g07610-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0000237
Physical Location & Seq
Forward (+)
16969823 .. 16971780
1958 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g20790.1

Sequence Viewer

Length: 1341 bp
ATGGAGAGTCTTTGTCCCGAAGCAGCTGAAACCATAGCCAGCAACGAAGACCTCCTTGCACATATCCTTCTTTGCATGCCCCCTAAATCTCTGCTCCGCTTCAAATCCGTCTCCAAGCACTGGCTCGCTCTTATCTCCGGCCCCAACTTCTGCAACCGCCATGCCCTCCAAAACCCAAATTCCAAGGTCTCTGCCTTCTTCGCCCGGACCATAATATCTCAAGAAATCTTCTTCACCTCTCTCGGCAACGACGAAAATGCATCTGGGTTTCGCTCCAAACCTCTGAATTTCGTCGGCGACCCACGGGGCGTCGAGATTCTGCAGTCCTGCAACGGCTTGCTCCTGTGTTGCTCCTCCCTCAGCACGACCGGCAGGTACTACGTTGTCAATCCCACAACCAGTAAGTTCTCAACGTTCTTTTTTCCAGCTGCTACTAAATCGACAACCGTTTCGGGTGTCGCTTTGGCTTTCGATCCTGCGAAATCGATTCATTACAAGGTTGTCGTCGTTAGTACCATTTCTGAGTCAGTTGGAGGTTACCAATTTAAGGTCTTTTTGTCTGAGACCCGAAGTTGGAAGGTTTTTCGGGCTAATTTCCCTGCGAAATTCGACATGAACTTCAGCCGTGGAGTGCACTGCAATGGACTAATTAGTTGGATTGGCGATGCAAGTAAGGTTTTGCTCTATGACACAGATGAACATCGTTTCAGGACTGTGCCAAGTCCGCCGGGTCACGGCGGCTACCGATGGCATAGATATTTTGGGGAGTCTTGTGGCCATTTGCATCTTATCGAAATTTCTAGGCCGCAACTTTCGCAATTTGAGGTGCTCGAGATGGAGAAGGACTACTCTGGTTGGTTTGTCAAGTACAATGTCGACCTTAATGCCATAAGCTCTGCATTTCCGGAGATGGTTTGCAACCCTCTTGAACCCTACTACTCATTTGTTGTTGTTTTCGTTGATGAGCATGATTCGTCTATTTTGCTGCACATTCCTTGTAAGGTCGTCTCTTATAATCTTAGGGAAAAGAAAGTTTGTGACTTAACTCCCAAAAACATTTACACCGAGAGGTCTCTAATAGTTCGATGGCAATCTGCTTATGCACATATGGACACTTTGGCTTGTAGATTATGCTCCATTTTGCTTAAATATCCTGCCTCCAATATGCCTGCTTCTGATTGGATATCAACCCTGGCTAGTTTGCCCAGTTCACTTCATTTATTCATTTGCGTACCACAAAGGGAAAATGAAGTCATGTTATTAAAAATAACTGGCAATGTCATACCTTACATCGTAGGTATACACTTTCCAGATCTCCTGTTGATAGATTTTTGCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

447

Amino Acids

50.2

Weight (kDa)

7.55

Isoelectric Point (pI)

44.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 51 8.9e-08 F-box domain
FBA_1 PF07734 104 - 243 1.4e-11 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000237)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G14315
fragaria_vesca FvH4_2g35920 FvH4_2g35930 FvH4_2g35940 FvH4_2g35950 FvH4_3g00321 FvH4_3g32490 FvH4_3g43790 FvH4_3g43790 FvH4_3g43790 FvH4_4g06360 FvH4_4g06370 FvH4_4g06370 FvH4_6g52062 FvH4_6g52062 FvH4_6g52080 FvH4_6g52610 FvH4_6g52830 FvH4_6g52861 FvH4_6g52861 FvH4_6g52862 FvH4_6g52871 FvH4_6g52880 FvH4_6g52931 FvH4_6g52941 FvH4_6g52942 FvH4_6g53001 FvH4_6g53021 FvH4_6g53072 FvH4_6g53610 FvH4_6g53620 FvH4_6g53620 FvH4_6g53651 FvH4_6g53660
malus_domestica MD13G1235400.v1.1 MD16G1240000.v1.1
prunus_persica Prupe.1G066400_v2.0.a1
pyrus_communis pycom13g20790 pycom16g20090
rosa_chinensis RchiOBHm_Chr2g0174451 RchiOBHm_Chr2g0174531 RchiOBHm_Chr2g0174701 RchiOBHm_Chr2g0174881 RchiOBHm_Chr2g0174951 RchiOBHm_Chr4g0396041 RchiOBHm_Chr4g0396501 RchiOBHm_Chr4g0398111 RchiOBHm_Chr5g0059531 RchiOBHm_Chr6g0264241
rosa_laevigata RLG00000009385 RLG00000009528 RLG00000009532 RLG00000009537 RLG00000009541 RLG00000009577 RLG00000022267 RLG00000022268 RLG00000022269 RLG00000022273 RLG00000022287 RLG00000022289 RLG00000032767 RLG00000035297
rosa_multiflora Rmu_co8114622.1_g000001 Rmu_co8160300.1_g000001 Rmu_co8411703.1_g000001 Rmu_sc0001217.1_g000015 Rmu_sc0001533.1_g000002 Rmu_sc0003649.1_g000012 Rmu_sc0003649.1_g000015 Rmu_sc0003649.1_g000017 Rmu_sc0003649.1_g000020 Rmu_sc0006325.1_g000006 Rmu_sc0009506.1_g000001 Rmu_sc0009766.1_g000006 Rmu_sc0015078.1_g000002 Rmu_sc0015594.1_g000006 Rmu_sc0015594.1_g000007
rosa_roxburghii Rroxscaffold_1G00021050 Rroxscaffold_2G00077800 Rroxscaffold_2G00077920 Rroxscaffold_2G00078070 Rroxscaffold_2G00078100 Rroxscaffold_2G00078130 Rroxscaffold_2G00078170 Rroxscaffold_3G00220050 Rroxscaffold_5G00340840 Rroxscaffold_5G00340850 Rroxscaffold_5G00341370 Rroxscaffold_5G00343010 Rroxscaffold_5G00381750
rosa_rugosa Rorug02G0577300 Rorug02G0577400 Rorug02G0577700 Rorug02G0577800 Rorug02G0579000 Rorug03G0352900 Rorug03G0352900 Rorug04G0006000 Rorug05G0323000
rosa_samantha Rh2AG658100 Rh2AG658400 Rh2AG658600 Rh2AG660200 Rh2AG663100 Rh2CG632100 Rh2CG632600 Rh2CG632700 Rh2CG634300 Rh2CG635600 Rh2DG682800 Rh2DG683300 Rh2DG686000 Rh3BG068500 Rh3CG066900 Rh4AG064800 Rh4AG065900 Rh4AG068900 Rh4AG083000 Rh4BG063600 Rh4BG063700 Rh4BG067000 Rh4BG080700 Rh4DG060400 Rh4DG060500 Rh4DG075600 Rh5CG423600
rosa_wichuraiana Rw2G053920 Rw2G053940 Rw2G053950 Rw2G054080 Rw2G054210 Rw4G000460 Rw4G005260 Rw4G005270 Rw4G005550 Rw4G006900 Rw5G036490 Rw5G036550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1014
Acc36I ACCTGC 1 cut(s) 363
AccB7I CCANNNNNTGG 1 cut(s) 120
AccI GTMKAC 2 cut(s) 876, 1300
AccIII TCCGGA 1 cut(s) 904
AciI CCGC 5 cut(s) 97, 157, 725, 738, 806
AclI AACGTT 1 cut(s) 413
AclWI GGATC 1 cut(s) 467
AcoI YGGCCR 1 cut(s) 775
AcsI RAATTY 4 cut(s) 178, 286, 605, 795
AcuI CTGAAG 1 cut(s) 604
AcyI GRCGYC 1 cut(s) 309
AfaI GTAC 4 cut(s) 377, 514, 869, 1233
AfiI CCNNNNNNNGG 4 cut(s) 120, 547, 573, 734
AgsI TTSAA 2 cut(s) 103, 929
AjnI CCWGG 1 cut(s) 1191
AluBI AGCT 3 cut(s) 26, 428, 894
AluI AGCT 3 cut(s) 26, 428, 894
Alw21I GWGCWC 2 cut(s) 636, 831
Alw26I GTCTC 5 cut(s) 115, 193, 557, 1012, 1077
Alw44I GTGCAC 1 cut(s) 632
AlwI GGATC 1 cut(s) 467
Ama87I CYCGRG 1 cut(s) 830
Aor13HI TCCGGA 1 cut(s) 904
AoxI GGCC 3 cut(s) 139, 775, 803
ApaLI GTGCAC 1 cut(s) 632
ApeKI GCWGC 3 cut(s) 23, 428, 985
ApoI RAATTY 4 cut(s) 178, 286, 605, 795
ArsI GACNNNNNNTTYG 2 cut(s) 433, 465
AspS9I GGNCC 2 cut(s) 140, 207
AsuC2I CCSGG 2 cut(s) 205, 729
AsuHPI GGTGA 1 cut(s) 226
AvaI CYCGRG 1 cut(s) 830
AvaII GGWCC 1 cut(s) 207
BaeGI GKGCMC 1 cut(s) 636
BalI TGGCCA 1 cut(s) 777
BbsI GAAGAC 1 cut(s) 54
Bbv12I GWGCWC 2 cut(s) 636, 831
BbvCI CCTCAGC 1 cut(s) 359
BbvI GCAGC 3 cut(s) 35, 415, 972
BccI CCATC 4 cut(s) 741, 829, 904, 1080
BceAI ACGGC 3 cut(s) 349, 609, 751
BcgI CGANNNNNNTGC 4 cut(s) 239, 273, 866, 900
BciT130I CCWGG 1 cut(s) 1193
BcnI CCSGG 2 cut(s) 205, 729
BcoDI GTCTC 5 cut(s) 115, 193, 557, 1012, 1077
BfaI CTAG 2 cut(s) 801, 1197
BfmI CTRYAG 1 cut(s) 320
BfuAI ACCTGC 1 cut(s) 363
BglII AGATCT 1 cut(s) 1312
BisI GCNGC 5 cut(s) 24, 429, 739, 806, 986
BlsI GCNGC 5 cut(s) 25, 430, 740, 807, 987
Bme1390I CCNGG 3 cut(s) 205, 729, 1193
Bme18I GGWCC 1 cut(s) 207
BmeT110I CYCGRG 1 cut(s) 830
BmgT120I GGNCC 2 cut(s) 140, 207
BmiI GGNNCC 1 cut(s) 142
BmrFI CCNGG 3 cut(s) 205, 729, 1193
BmrI ACTGGG 1 cut(s) 1200
BmsI GCATC 3 cut(s) 269, 655, 793
BmuI ACTGGG 1 cut(s) 1200
BpiI GAAGAC 1 cut(s) 54
Bpu10I CCTNAGC 1 cut(s) 359
BpuEI CTTGAG 1 cut(s) 204
BpuMI CCSGG 2 cut(s) 205, 729
Bsa29I ATCGAT 1 cut(s) 485
BsaBI GATNNNNATC 2 cut(s) 699, 1090
BsaHI GRCGYC 1 cut(s) 309
BsaI GGTCTC 3 cut(s) 193, 557, 1077
BsaJI CCNNGG 4 cut(s) 183, 302, 625, 1191
BsaWI WCCGGW 1 cut(s) 904
Bsc4I CCNNNNNNNGG 4 cut(s) 120, 547, 573, 734
Bse118I RCCGGY 1 cut(s) 368
Bse1I ACTGG 4 cut(s) 125, 399, 1206, 1276
Bse3DI GCAATG 2 cut(s) 646, 1282
Bse8I GATNNNNATC 2 cut(s) 699, 1090
BseAI TCCGGA 1 cut(s) 904
BseBI CCWGG 1 cut(s) 1193
BseCI ATCGAT 1 cut(s) 485
BseDI CCNNGG 4 cut(s) 183, 302, 625, 1191
BseJI GATNNNNATC 2 cut(s) 699, 1090
BseLI CCNNNNNNNGG 4 cut(s) 120, 547, 573, 734
BseMI GCAATG 2 cut(s) 646, 1282
BseMII CTCAG 3 cut(s) 373, 513, 552
BseNI ACTGG 4 cut(s) 125, 399, 1206, 1276
BseRI GAGGAG 1 cut(s) 343
BseSI GKGCMC 1 cut(s) 636
BseXI GCAGC 3 cut(s) 35, 415, 972
BsgI GTGCAG 1 cut(s) 971
Bsh1285I CGRYCG 1 cut(s) 369
BshFI GGCC 3 cut(s) 141, 777, 805
BshVI ATCGAT 1 cut(s) 485
BsiEI CGRYCG 1 cut(s) 369
BsiHKAI GWGCWC 2 cut(s) 636, 831
BsiHKCI CYCGRG 1 cut(s) 830
BsiSI CCGG 5 cut(s) 138, 205, 369, 728, 905
BslI CCNNNNNNNGG 4 cut(s) 120, 547, 573, 734
BsmAI GTCTC 5 cut(s) 115, 193, 557, 1012, 1077
BsmBI CGTCTC 2 cut(s) 115, 1012
BsnI GGCC 3 cut(s) 141, 777, 805
Bso31I GGTCTC 3 cut(s) 193, 557, 1077
BsoBI CYCGRG 1 cut(s) 830
Bsp1286I GDGCHC 2 cut(s) 636, 831
Bsp13I TCCGGA 1 cut(s) 904
Bsp143I GATC 2 cut(s) 472, 1312
BspACI CCGC 5 cut(s) 97, 157, 725, 738, 806
BspANI GGCC 3 cut(s) 141, 777, 805
BspCNI CTCAG 3 cut(s) 372, 514, 553
BspDI ATCGAT 1 cut(s) 485
BspEI TCCGGA 1 cut(s) 904
BspLI GGNNCC 1 cut(s) 142
BspMAI CTGCAG 1 cut(s) 324
BspMI ACCTGC 1 cut(s) 363
BspPI GGATC 1 cut(s) 467
BspTNI GGTCTC 3 cut(s) 193, 557, 1077
BsrDI GCAATG 2 cut(s) 646, 1282
BsrFI RCCGGY 1 cut(s) 368
BsrI ACTGG 4 cut(s) 125, 399, 1206, 1276
BssAI RCCGGY 1 cut(s) 368
BssECI CCNNGG 4 cut(s) 183, 302, 625, 1191
BssMI GATC 2 cut(s) 472, 1312
BssNAI GTATAC 1 cut(s) 1301
BssNI GRCGYC 1 cut(s) 309
BssT1I CCWWGG 1 cut(s) 183
Bst1107I GTATAC 1 cut(s) 1301
Bst2UI CCWGG 1 cut(s) 1193
Bst4CI ACNGT 2 cut(s) 448, 715
BstACI GRCGYC 1 cut(s) 309
BstC8I GCNNGC 5 cut(s) 40, 77, 126, 338, 1170
BstDEI CTNAG 4 cut(s) 359, 522, 561, 1019
BstDSI CCRYGG 2 cut(s) 302, 625
BstEII GGTNACC 1 cut(s) 536
BstKTI GATC 2 cut(s) 475, 1315
BstMAI GTCTC 5 cut(s) 115, 193, 557, 1012, 1077
BstMBI GATC 2 cut(s) 472, 1312
BstMCI CGRYCG 1 cut(s) 369
BstMWI GCNNNNNNNGC 4 cut(s) 200, 369, 724, 814
BstNI CCWGG 1 cut(s) 1193
BstNSI RCATGY 1 cut(s) 79
BstPI GGTNACC 1 cut(s) 536
BstSCI CCNGG 3 cut(s) 203, 727, 1191
BstSFI CTRYAG 1 cut(s) 320
BstSLI GKGCMC 1 cut(s) 636
BstV1I GCAGC 3 cut(s) 35, 415, 972
BstV2I GAAGAC 1 cut(s) 54
BstX2I RGATCY 1 cut(s) 1312
BstYI RGATCY 1 cut(s) 1312
BstZ17I GTATAC 1 cut(s) 1301
Bsu15I ATCGAT 1 cut(s) 485
BsuRI GGCC 3 cut(s) 141, 777, 805
BsuTUI ATCGAT 1 cut(s) 485
BtgI CCRYGG 2 cut(s) 302, 625
BtgZI GCGATG 1 cut(s) 678
BtsI GCAGTG 1 cut(s) 634
BtsIMutI CAGTG 2 cut(s) 118, 634
BveI ACCTGC 1 cut(s) 363
Cac8I GCNNGC 5 cut(s) 40, 77, 126, 338, 1170
Cfr10I RCCGGY 1 cut(s) 368
Cfr13I GGNCC 2 cut(s) 140, 207
ClaI ATCGAT 1 cut(s) 485
CseI GACGC 1 cut(s) 298
Csp6I GTAC 4 cut(s) 376, 513, 868, 1232
CviAII CATG 5 cut(s) 76, 161, 613, 968, 1255
CviQI GTAC 4 cut(s) 376, 513, 868, 1232
DdeI CTNAG 4 cut(s) 359, 522, 561, 1019
DpnI GATC 2 cut(s) 474, 1314
DpnII GATC 2 cut(s) 472, 1312
EaeI YGGCCR 1 cut(s) 775
EciI GGCGGA 1 cut(s) 714
Eco130I CCWWGG 1 cut(s) 183
Eco31I GGTCTC 3 cut(s) 193, 557, 1077
Eco32I GATATC 1 cut(s) 1185
Eco47I GGWCC 1 cut(s) 207
Eco57I CTGAAG 1 cut(s) 604
Eco88I CYCGRG 1 cut(s) 830
Eco91I GGTNACC 1 cut(s) 536
EcoO65I GGTNACC 1 cut(s) 536
EcoRII CCWGG 1 cut(s) 1191
EcoRV GATATC 1 cut(s) 1185
EcoT14I CCWWGG 1 cut(s) 183
EcoT22I ATGCAT 1 cut(s) 262
ErhI CCWWGG 1 cut(s) 183
Esp3I CGTCTC 2 cut(s) 115, 1012
FaeI CATG 5 cut(s) 79, 164, 616, 971, 1258
FalI AAGNNNNNCTT 2 cut(s) 39, 71
FatI CATG 5 cut(s) 75, 160, 612, 967, 1254
FauNDI CATATG 1 cut(s) 1107
FblI GTMKAC 2 cut(s) 876, 1300
Fnu4HI GCNGC 5 cut(s) 24, 429, 739, 806, 986
Fsp4HI GCNGC 5 cut(s) 24, 429, 739, 806, 986
FspBI CTAG 2 cut(s) 801, 1197
GluI GCNGC 5 cut(s) 24, 429, 739, 806, 986
HaeIII GGCC 3 cut(s) 141, 777, 805
HapII CCGG 5 cut(s) 138, 205, 369, 728, 905
HgaI GACGC 1 cut(s) 298
Hin1I GRCGYC 1 cut(s) 309
Hin1II CATG 5 cut(s) 79, 164, 616, 971, 1258
HincII GTYRAC 1 cut(s) 877
HindII GTYRAC 1 cut(s) 877
HinfI GANTC 6 cut(s) 7, 316, 487, 524, 767, 971
HpaII CCGG 5 cut(s) 138, 205, 369, 728, 905
HphI GGTGA 1 cut(s) 226
Hpy166II GTNNAC 4 cut(s) 634, 877, 1211, 1301
Hpy188I TCNGA 4 cut(s) 285, 523, 562, 1177
Hpy188III TCNNGA 8 cut(s) 17, 221, 313, 709, 832, 905, 926, 1310
Hpy8I GTNNAC 4 cut(s) 634, 877, 1211, 1301
Hpy99I CGWCG 4 cut(s) 254, 296, 314, 509
HpyAV CCTTC 4 cut(s) 77, 205, 571, 835
HpyCH4III ACNGT 2 cut(s) 448, 715
HpyCH4IV ACGT 2 cut(s) 381, 413
HpyF10VI GCNNNNNNNGC 4 cut(s) 200, 369, 724, 814
HpyF3I CTNAG 4 cut(s) 359, 522, 561, 1019
HpySE526I ACGT 2 cut(s) 381, 413
Hsp92I GRCGYC 1 cut(s) 309
Hsp92II CATG 5 cut(s) 79, 164, 616, 971, 1258
Kpn2I TCCGGA 1 cut(s) 904
Kzo9I GATC 2 cut(s) 472, 1312
LmnI GCTCC 5 cut(s) 99, 278, 345, 356, 1139
Lsp1109I GCAGC 3 cut(s) 35, 415, 972
LweI GCATC 3 cut(s) 269, 655, 793
MaeI CTAG 2 cut(s) 801, 1197
MaeII ACGT 2 cut(s) 381, 413
MaeIII GTNAC 3 cut(s) 536, 731, 1037
MalI GATC 2 cut(s) 474, 1314
MboI GATC 2 cut(s) 472, 1312
MboII GAAGA 4 cut(s) 59, 190, 220, 223
MflI RGATCY 1 cut(s) 1312
MhlI GDGCHC 2 cut(s) 636, 831
MlsI TGGCCA 1 cut(s) 777
MluCI AATT 8 cut(s) 178, 286, 542, 592, 605, 648, 795, 818
MluNI TGGCCA 1 cut(s) 777
MlyI GAGTC 3 cut(s) 16, 533, 776
MmeI TCCRAC 3 cut(s) 511, 554, 635
Mox20I TGGCCA 1 cut(s) 777
Mph1103I ATGCAT 1 cut(s) 262
MroI TCCGGA 1 cut(s) 904
MscI TGGCCA 1 cut(s) 777
MseI TTAA 5 cut(s) 546, 882, 1043, 1146, 1262
MslI CAYNNNNRTG 1 cut(s) 639
Msp20I TGGCCA 1 cut(s) 777
MspA1I CMGCKG 2 cut(s) 26, 428
MspI CCGG 5 cut(s) 138, 205, 369, 728, 905
MspR9I CCNGG 3 cut(s) 205, 729, 1193
MvaI CCWGG 1 cut(s) 1193
MwoI GCNNNNNNNGC 4 cut(s) 200, 369, 724, 814
NciI CCSGG 2 cut(s) 205, 729
NdeI CATATG 1 cut(s) 1107
NdeII GATC 2 cut(s) 472, 1312
NlaIII CATG 5 cut(s) 79, 164, 616, 971, 1258
NlaIV GGNNCC 1 cut(s) 142
NmeAIII GCCGAG 1 cut(s) 222
NmuCI GTSAC 2 cut(s) 731, 1037
NsiI ATGCAT 1 cut(s) 262
NspI RCATGY 1 cut(s) 79
PaeI GCATGC 1 cut(s) 79
PaeR7I CTCGAG 1 cut(s) 830
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PfeI GAWTC 3 cut(s) 316, 487, 971
PflMI CCANNNNNTGG 1 cut(s) 120
PkrI GCNGC 5 cut(s) 25, 430, 740, 807, 987
PleI GAGTC 3 cut(s) 15, 532, 775
PpsI GAGTC 3 cut(s) 15, 532, 775
PsiI TTATAA 1 cut(s) 1014
Psp1406I AACGTT 1 cut(s) 413
Psp6I CCWGG 1 cut(s) 1191
PspEI GGTNACC 1 cut(s) 536
PspGI CCWGG 1 cut(s) 1191
PspN4I GGNNCC 1 cut(s) 142
PspPI GGNCC 2 cut(s) 140, 207
PstI CTGCAG 1 cut(s) 324
PsuI RGATCY 1 cut(s) 1312
PvuII CAGCTG 2 cut(s) 26, 428
RsaI GTAC 4 cut(s) 377, 514, 869, 1233
RsaNI GTAC 4 cut(s) 376, 513, 868, 1232
RseI CAYNNNNRTG 1 cut(s) 639
SalI GTCGAC 1 cut(s) 875
SaqAI TTAA 5 cut(s) 546, 882, 1043, 1146, 1262
SatI GCNGC 5 cut(s) 24, 429, 739, 806, 986
Sau3AI GATC 2 cut(s) 472, 1312
Sau96I GGNCC 2 cut(s) 140, 207
SchI GAGTC 3 cut(s) 16, 533, 776
ScrFI CCNGG 3 cut(s) 205, 729, 1193
SduI GDGCHC 2 cut(s) 636, 831
SfaNI GCATC 3 cut(s) 269, 655, 793
SfcI CTRYAG 1 cut(s) 320
Sfr274I CTCGAG 1 cut(s) 830
SinI GGWCC 1 cut(s) 207
SlaI CTCGAG 1 cut(s) 830
SmiMI CAYNNNNRTG 1 cut(s) 639
SmlI CTYRAG 2 cut(s) 219, 830
SmoI CTYRAG 2 cut(s) 219, 830
SphI GCATGC 1 cut(s) 79
Sse9I AATT 8 cut(s) 178, 286, 542, 592, 605, 648, 795, 818
SsiI CCGC 5 cut(s) 97, 157, 725, 738, 806
SspMI CTAG 2 cut(s) 801, 1197
StyD4I CCNGG 3 cut(s) 203, 727, 1191
StyI CCWWGG 1 cut(s) 183
TaaI ACNGT 2 cut(s) 448, 715
TaiI ACGT 2 cut(s) 384, 416
TaqI TCGA 9 cut(s) 312, 440, 471, 485, 609, 792, 831, 876, 1084
TasI AATT 8 cut(s) 178, 286, 542, 592, 605, 648, 795, 818
TatI WGTACW 1 cut(s) 867
TauI GCSGC 2 cut(s) 741, 808
TfiI GAWTC 3 cut(s) 316, 487, 971
Tru1I TTAA 5 cut(s) 546, 882, 1043, 1146, 1262
Tru9I TTAA 5 cut(s) 546, 882, 1043, 1146, 1262
TscAI CASTG 2 cut(s) 125, 641
TseFI GTSAC 2 cut(s) 731, 1037
TseI GCWGC 3 cut(s) 23, 428, 985
Tsp45I GTSAC 2 cut(s) 731, 1037
TspDTI ATGAA 6 cut(s) 479, 629, 711, 1205, 1213, 1263
TspGWI ACGGA 1 cut(s) 97
TspRI CASTG 2 cut(s) 125, 641
Van91I CCANNNNNTGG 1 cut(s) 120
VneI GTGCAC 1 cut(s) 632
VpaK11BI GGWCC 1 cut(s) 207
XapI RAATTY 4 cut(s) 178, 286, 605, 795
XceI RCATGY 1 cut(s) 79
XhoI CTCGAG 1 cut(s) 830
XmiI GTMKAC 2 cut(s) 876, 1300
XspI CTAG 2 cut(s) 801, 1197
Zsp2I ATGCAT 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.