RLG00000022267

F-box protein At5g07610-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000237
Physical Location & Seq
Forward (+)
82101701 .. 82105372
3672 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022267

Sequence Viewer

Length: 2238 bp
ATGGAGCACAGATTCTACCCCAAACGCTGCACCAGTAGCTTAGCGGAAACCGTAGCCAGCATAGAACAAGTCCTTACTGAAATCCTTGTGCGCGTGCCAGCTAAACCTCTAGTCCGCTTCAAATGCGTCTCCAAGCAGTGGCTCTCTCTTATTTCCGACCCTAAATTCTGTCACCGCCACACCCTTCAAAACCCTAACACTCCAGTCTCTGCTGTCTTTTGTGACAGATCCTGCCGCCCCTTTTGTTTCGTCCCTATTGATTTGGATCACATGCGTGGAACCGGTAGTACTAGTAGTAATATTAGGAACCTTGGAAACCAAAACGCATCTGGGTCTGGTTCACCTACTTGTAATCCTCTTGATTTTGTACAGAACCAATATGATTATGGCATCAAAACTGTCCACACCTTTCCTGTCAATCGTCTTCATTTTGATCACAAAAGCCCATCTCGCTCTGGTTCACCCCCTTTCAATCCTCTTACGTTTGCTCATAACCAATATCATGATGACATCATAATTATCCAGTCCTGCAATGGCCTCTTCCTGTGTCTTCTTTTTCATAATAAACTGAACCCCCCATATCTTATTTTCAATCCTACAACAAACCAGTTCTCTACACTTATTCCTCCTCCAACTACTGCTGTTACCACCGCTACTGGTGAACGAAAAGAACACTATGTCTCTACTGCTTTGGCTTTTGACCCTTCCAAATCACCTCATTACAAGGTGGTCTGTCTTCGGACCATTGATGGATCTGAAGACGGCACTATCTATCACATAGTGATATATTCATCTGAGACTCAAAGTTGGAGGATTCTCGATTCTTCTATTGAGAGGGTATTTTCCATCCTCTATGAAGGCGTGGTATACTGGAATGGAGCAATTCATTGGTTAGGCATGTTTAGTGAGGTAGCATACTTTCACATAGATGAAGAACGTGACGGTTTTATTGATAACCCTCCTCACTTTTATGAGAAGGACGTTCACAGGAGGAAATGTAGATACTTTCAGGAGTCTCATGACGGGCACCATTTGTATCTTATTGATATATATCGGCCTTGTATTACTAAATTTGAAGTGTTTGAGATGGGGAAAGACTACTGTGGTTGGTTTGTCAAGTACCTTGTTGACATTGATCCCATATGCCGGTGGAACCTGTCTGATCGATTTGTTGTTCTATTTCTAGATCAAGATGAAAATGAAGAAGAGGAAAGTTCATCTCTGTTGCTGCATATGCCTGGCAAACTCATTTCTTATAATCTTAAGAGCAAGACCTACAAATCTCTTGATTTAACTGCCAAGCCCGGAGTTAATGATTCTCTCTTACGAGTTGAAGCAGATAATTATCGATATATGGAGACTCTGGCCTGTTCACCCTTCAATCCTCTCAGTGTAGTTCAAAACCAATATAATAATCACATCAGAGTTATCCAGTCCTGCAACGGCCTCTTCTTGTGCCATCTTTTGAGTGCAAAAGAAGTGAACCCCCCATATTTTATTCTCAATCCCACAACCAACCAGTTCTCCACACTTATTCCTCCAGCAGCTACTGCTGTTACTAACGATGCTGGTCAACAAGTAGAACCCTATATCATCAGTATTGCTTTGGCTTTTGACCCTTCCAAATCACCTCATTACAAGGCGGTCTGCCTACGCAACAATGACGGAACAAAATATGGCCGGCACTTCCACATACTGATATATTCGTCTGAGACTCGAAGTTGGAAGCTTCTTGGTTCTTCTTTCTCTAGGGGATTTCACATCCTCTACAAACGCGTTGTTTACTGCAATGGAGCAATTCACTGGTTAGGCATGTATAGTGGGTTGTCTTACTTTCGTGTGGATGAAGAGCGTATTGGAGAGTCTGGTGACAGGCGCCATTTGCATCTTATTGATATTTATGTGCCTAATATCTCTCAATTTGAAGTTTTGGAGATGGGAAAAGACTACTCTGGCTGGTTTGTCAAGTACCTTGTTGACCTTGATCCCATATGCACTGCTTACCCCTGGTTTCGATTGGATCGATTTATCATTCTCTTTCTAGCTCAAGACGAAATTGAAGGAAAGGAATGTTCATCTCTGTTGCTGCATACAGCTGGCAAAGTCATCTCTTATAATCTTAAGAGTAGGACCTTCAAATCTTTTGAGTTAGCTCCCAAGGCCGGTGTTGATATTGTCTCTTACGATCGAGTTGGTGAAAAAAATTATCGGTACGTGGAGACATTGGCTTGTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

746

Amino Acids

85.54

Weight (kDa)

6.68

Isoelectric Point (pI)

49.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 58 4.9e-06 F-box domain
FBA_1 PF07734 164 - 299 8.1e-12 F-box associated beta propeller domain
FBA_3 PF08268 164 - 321 2.1e-08 F-box associated beta propeller domain
FBA_1 PF07734 468 - 604 1.7e-09 F-box associated beta propeller domain
FBA_3 PF08268 472 - 605 2.7e-06 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000237)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G14315
fragaria_vesca FvH4_2g35920 FvH4_2g35930 FvH4_2g35940 FvH4_2g35950 FvH4_3g00321 FvH4_3g32490 FvH4_3g43790 FvH4_3g43790 FvH4_3g43790 FvH4_4g06360 FvH4_4g06370 FvH4_4g06370 FvH4_6g52062 FvH4_6g52062 FvH4_6g52080 FvH4_6g52610 FvH4_6g52830 FvH4_6g52861 FvH4_6g52861 FvH4_6g52862 FvH4_6g52871 FvH4_6g52880 FvH4_6g52931 FvH4_6g52941 FvH4_6g52942 FvH4_6g53001 FvH4_6g53021 FvH4_6g53072 FvH4_6g53610 FvH4_6g53620 FvH4_6g53620 FvH4_6g53651 FvH4_6g53660
malus_domestica MD13G1235400.v1.1 MD16G1240000.v1.1
prunus_persica Prupe.1G066400_v2.0.a1
pyrus_communis pycom13g20790 pycom16g20090
rosa_chinensis RchiOBHm_Chr2g0174451 RchiOBHm_Chr2g0174531 RchiOBHm_Chr2g0174701 RchiOBHm_Chr2g0174881 RchiOBHm_Chr2g0174951 RchiOBHm_Chr4g0396041 RchiOBHm_Chr4g0396501 RchiOBHm_Chr4g0398111 RchiOBHm_Chr5g0059531 RchiOBHm_Chr6g0264241
rosa_laevigata RLG00000009385 RLG00000009528 RLG00000009532 RLG00000009537 RLG00000009541 RLG00000009577 RLG00000022267 RLG00000022268 RLG00000022269 RLG00000022273 RLG00000022287 RLG00000022289 RLG00000032767 RLG00000035297
rosa_multiflora Rmu_co8114622.1_g000001 Rmu_co8160300.1_g000001 Rmu_co8411703.1_g000001 Rmu_sc0001217.1_g000015 Rmu_sc0001533.1_g000002 Rmu_sc0003649.1_g000012 Rmu_sc0003649.1_g000015 Rmu_sc0003649.1_g000017 Rmu_sc0003649.1_g000020 Rmu_sc0006325.1_g000006 Rmu_sc0009506.1_g000001 Rmu_sc0009766.1_g000006 Rmu_sc0015078.1_g000002 Rmu_sc0015594.1_g000006 Rmu_sc0015594.1_g000007
rosa_roxburghii Rroxscaffold_1G00021050 Rroxscaffold_2G00077800 Rroxscaffold_2G00077920 Rroxscaffold_2G00078070 Rroxscaffold_2G00078100 Rroxscaffold_2G00078130 Rroxscaffold_2G00078170 Rroxscaffold_3G00220050 Rroxscaffold_5G00340840 Rroxscaffold_5G00340850 Rroxscaffold_5G00341370 Rroxscaffold_5G00343010 Rroxscaffold_5G00381750
rosa_rugosa Rorug02G0577300 Rorug02G0577400 Rorug02G0577700 Rorug02G0577800 Rorug02G0579000 Rorug03G0352900 Rorug03G0352900 Rorug04G0006000 Rorug05G0323000
rosa_samantha Rh2AG658100 Rh2AG658400 Rh2AG658600 Rh2AG660200 Rh2AG663100 Rh2CG632100 Rh2CG632600 Rh2CG632700 Rh2CG634300 Rh2CG635600 Rh2DG682800 Rh2DG683300 Rh2DG686000 Rh3BG068500 Rh3CG066900 Rh4AG064800 Rh4AG065900 Rh4AG068900 Rh4AG083000 Rh4BG063600 Rh4BG063700 Rh4BG067000 Rh4BG080700 Rh4DG060400 Rh4DG060500 Rh4DG075600 Rh5CG423600
rosa_wichuraiana Rw2G053920 Rw2G053940 Rw2G053950 Rw2G054080 Rw2G054210 Rw4G000460 Rw4G005260 Rw4G005270 Rw4G005550 Rw4G006900 Rw5G036490 Rw5G036550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1257, 2115
AccB1I GGYRCC 2 cut(s) 1026, 1875
AccB7I CCANNNNNTGG 1 cut(s) 138
AccI GTMKAC 1 cut(s) 867
AccII CGCG 2 cut(s) 93, 1776
AciI CCGC 6 cut(s) 44, 115, 175, 235, 651, 1643
AclWI GGATC 6 cut(s) 222, 273, 760, 1130, 1979, 2028
AcoI YGGCCR 1 cut(s) 1678
AcsI RAATTY 2 cut(s) 164, 1070
AcuI CTGAAG 1 cut(s) 777
AcyI GRCGYC 1 cut(s) 1876
AdeI CACNNNGTG 1 cut(s) 781
AfaI GTAC 5 cut(s) 289, 369, 1121, 1970, 2213
AfiI CCNNNNNNNGG 3 cut(s) 138, 1146, 2162
AflII CTTAAG 2 cut(s) 1262, 2120
AflIII ACRYGT 1 cut(s) 1774
AgeI ACCGGT 1 cut(s) 281
AhlI ACTAGT 1 cut(s) 290
AjnI CCWGG 2 cut(s) 1237, 2006
AjuI GAANNNNNNNTTGG 2 cut(s) 1839, 1871
AleI CACNNNNGTG 1 cut(s) 273
AluBI AGCT 7 cut(s) 39, 101, 1547, 1729, 2045, 2096, 2153
AluI AGCT 7 cut(s) 39, 101, 1547, 1729, 2045, 2096, 2153
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 9 cut(s) 133, 211, 685, 791, 1020, 1352, 1706, 2182, 2213
AlwI GGATC 6 cut(s) 222, 273, 760, 1130, 1979, 2028
AlwNI CAGNNNCTG 3 cut(s) 209, 231, 1550
AoxI GGCC 6 cut(s) 535, 1055, 1365, 1444, 1678, 2160
ApeKI GCWGC 4 cut(s) 27, 1228, 1544, 2086
ApoI RAATTY 2 cut(s) 164, 1070
AsiGI ACCGGT 1 cut(s) 281
AspLEI GCGC 2 cut(s) 93, 1878
AspS9I GGNCC 2 cut(s) 741, 2130
AsuC2I CCSGG 1 cut(s) 1305
AsuHPI GGTGA 9 cut(s) 164, 333, 453, 671, 705, 1365, 1620, 1880, 2207
AvaII GGWCC 2 cut(s) 741, 2130
BaeGI GKGCMC 1 cut(s) 1029
BanI GGYRCC 2 cut(s) 1026, 1875
BbsI GAAGAC 4 cut(s) 416, 542, 728, 765
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 4 cut(s) 14, 1215, 1556, 2073
BccI CCATC 6 cut(s) 454, 743, 854, 1081, 1467, 1930
BceAI ACGGC 2 cut(s) 778, 1459
BciT130I CCWGG 2 cut(s) 1239, 2008
BclI TGATCA 1 cut(s) 433
BcnI CCSGG 1 cut(s) 1305
BcoDI GTCTC 9 cut(s) 133, 211, 685, 791, 1020, 1352, 1706, 2182, 2213
BcuI ACTAGT 1 cut(s) 290
BfaI CTAG 5 cut(s) 110, 291, 1184, 1749, 2042
BfoI RGCGCY 1 cut(s) 1879
BfrI CTTAAG 2 cut(s) 1262, 2120
BisI GCNGC 5 cut(s) 28, 235, 1229, 1545, 2087
BlpI GCTNAGC 1 cut(s) 40
BlsI GCNGC 5 cut(s) 29, 236, 1230, 1546, 2088
BmcAI AGTACT 1 cut(s) 289
Bme1390I CCNGG 3 cut(s) 1239, 1305, 2008
Bme18I GGWCC 2 cut(s) 741, 2130
BmgT120I GGNCC 2 cut(s) 741, 2130
BmiI GGNNCC 5 cut(s) 280, 308, 1028, 1154, 1877
BmrFI CCNGG 3 cut(s) 1239, 1305, 2008
BmsI GCATC 4 cut(s) 335, 399, 1555, 1894
BpiI GAAGAC 4 cut(s) 416, 542, 728, 765
BpmI CTGGAG 2 cut(s) 186, 1524
Bpu1102I GCTNAGC 1 cut(s) 40
BpuEI CTTGAG 1 cut(s) 2031
BpuMI CCSGG 1 cut(s) 1305
Bsa29I ATCGAT 3 cut(s) 1165, 1348, 2023
BsaAI YACGTR 1 cut(s) 2215
BsaBI GATNNNNATC 3 cut(s) 264, 1050, 1344
BsaHI GRCGYC 1 cut(s) 1876
BsaJI CCNNGG 3 cut(s) 310, 2006, 2157
BsaWI WCCGGW 1 cut(s) 281
BsaXI ACNNNNNCTCC 4 cut(s) 982, 1012, 1508, 1538
Bsc4I CCNNNNNNNGG 3 cut(s) 138, 1146, 2162
Bse118I RCCGGY 4 cut(s) 281, 1146, 1680, 2162
Bse1I ACTGG 9 cut(s) 33, 203, 523, 607, 661, 875, 1432, 1519, 1808
Bse3DI GCAATG 2 cut(s) 538, 1795
Bse8I GATNNNNATC 3 cut(s) 264, 1050, 1344
BseBI CCWGG 2 cut(s) 1239, 2008
BseCI ATCGAT 3 cut(s) 1165, 1348, 2023
BseDI CCNNGG 3 cut(s) 310, 2006, 2157
BseGI GGATG 3 cut(s) 846, 1761, 1849
BseJI GATNNNNATC 3 cut(s) 264, 1050, 1344
BseLI CCNNNNNNNGG 3 cut(s) 138, 1146, 2162
BseMI GCAATG 2 cut(s) 538, 1795
BseMII CTCAG 3 cut(s) 786, 1402, 1701
BseNI ACTGG 9 cut(s) 33, 203, 523, 607, 661, 875, 1432, 1519, 1808
BseRI GAGGAG 2 cut(s) 618, 951
BseSI GKGCMC 1 cut(s) 1029
BseXI GCAGC 4 cut(s) 14, 1215, 1556, 2073
BsgI GTGCAG 1 cut(s) 13
Bsh1236I CGCG 2 cut(s) 93, 1776
Bsh1285I CGRYCG 1 cut(s) 2188
BshFI GGCC 6 cut(s) 537, 1057, 1367, 1446, 1680, 2162
BshNI GGYRCC 2 cut(s) 1026, 1875
BshTI ACCGGT 1 cut(s) 281
BshVI ATCGAT 3 cut(s) 1165, 1348, 2023
BsiEI CGRYCG 1 cut(s) 2188
BsiHKAI GWGCWC 1 cut(s) 9
BsiSI CCGG 5 cut(s) 282, 1147, 1305, 1681, 2163
BslFI GGGAC 1 cut(s) 236
BslI CCNNNNNNNGG 3 cut(s) 138, 1146, 2162
BsmAI GTCTC 9 cut(s) 133, 211, 685, 791, 1020, 1352, 1706, 2182, 2213
BsmBI CGTCTC 1 cut(s) 133
BsmFI GGGAC 1 cut(s) 236
BsnI GGCC 6 cut(s) 537, 1057, 1367, 1446, 1680, 2162
Bsp1286I GDGCHC 2 cut(s) 9, 1029
Bsp1407I TGTACA 1 cut(s) 367
Bsp1720I GCTNAGC 1 cut(s) 40
BspACI CCGC 6 cut(s) 44, 115, 175, 235, 651, 1643
BspANI GGCC 6 cut(s) 537, 1057, 1367, 1446, 1680, 2162
BspCNI CTCAG 3 cut(s) 787, 1401, 1702
BspDI ATCGAT 3 cut(s) 1165, 1348, 2023
BspFNI CGCG 2 cut(s) 93, 1776
BspHI TCATGA 2 cut(s) 502, 1018
BspLI GGNNCC 5 cut(s) 280, 308, 1028, 1154, 1877
BspPI GGATC 6 cut(s) 222, 273, 760, 1130, 1979, 2028
BspQI GCTCTTC 1 cut(s) 1842
BspT107I GGYRCC 2 cut(s) 1026, 1875
BspTI CTTAAG 2 cut(s) 1262, 2120
BsrDI GCAATG 2 cut(s) 538, 1795
BsrFI RCCGGY 4 cut(s) 281, 1146, 1680, 2162
BsrGI TGTACA 1 cut(s) 367
BsrI ACTGG 9 cut(s) 33, 203, 523, 607, 661, 875, 1432, 1519, 1808
BssAI RCCGGY 4 cut(s) 281, 1146, 1680, 2162
BssECI CCNNGG 3 cut(s) 310, 2006, 2157
BssNAI GTATAC 1 cut(s) 868
BssNI GRCGYC 1 cut(s) 1876
BssT1I CCWWGG 2 cut(s) 310, 2157
Bst1107I GTATAC 1 cut(s) 868
Bst2UI CCWGG 2 cut(s) 1239, 2008
Bst4CI ACNGT 4 cut(s) 52, 400, 944, 1103
Bst6I CTCTTC 4 cut(s) 545, 1200, 1454, 1842
BstACI GRCGYC 1 cut(s) 1876
BstAFI CTTAAG 2 cut(s) 1262, 2120
BstAPI GCANNNNNTGC 1 cut(s) 1550
BstAUI TGTACA 1 cut(s) 367
BstBAI YACGTR 1 cut(s) 2215
BstC8I GCNNGC 5 cut(s) 58, 95, 99, 1682, 2098
BstDEI CTNAG 4 cut(s) 40, 795, 1388, 1710
BstF5I GGATG 3 cut(s) 846, 1761, 1849
BstFNI CGCG 2 cut(s) 93, 1776
BstH2I RGCGCY 1 cut(s) 1879
BstHHI GCGC 2 cut(s) 93, 1878
BstMAI GTCTC 9 cut(s) 133, 211, 685, 791, 1020, 1352, 1706, 2182, 2213
BstMCI CGRYCG 1 cut(s) 2188
BstMWI GCNNNNNNNGC 7 cut(s) 36, 123, 450, 1234, 1550, 1882, 2159
BstNI CCWGG 2 cut(s) 1239, 2008
BstNSI RCATGY 3 cut(s) 274, 901, 1816
BstSCI CCNGG 3 cut(s) 1237, 1303, 2006
BstSLI GKGCMC 1 cut(s) 1029
BstUI CGCG 2 cut(s) 93, 1776
BstV1I GCAGC 4 cut(s) 14, 1215, 1556, 2073
BstV2I GAAGAC 4 cut(s) 416, 542, 728, 765
BstX2I RGATCY 2 cut(s) 227, 752
BstYI RGATCY 2 cut(s) 227, 752
BstZ17I GTATAC 1 cut(s) 868
Bsu15I ATCGAT 3 cut(s) 1165, 1348, 2023
BsuRI GGCC 6 cut(s) 537, 1057, 1367, 1446, 1680, 2162
BsuTUI ATCGAT 3 cut(s) 1165, 1348, 2023
BtsCI GGATG 3 cut(s) 846, 1761, 1849
BtsI GCAGTG 2 cut(s) 143, 1995
BtsIMutI CAGTG 4 cut(s) 143, 1396, 1801, 1995
Cac8I GCNNGC 5 cut(s) 58, 95, 99, 1682, 2098
CaiI CAGNNNCTG 3 cut(s) 209, 231, 1550
CciI TCATGA 2 cut(s) 502, 1018
CfoI GCGC 2 cut(s) 93, 1878
Cfr10I RCCGGY 4 cut(s) 281, 1146, 1680, 2162
Cfr13I GGNCC 2 cut(s) 741, 2130
ClaI ATCGAT 3 cut(s) 1165, 1348, 2023
CseI GACGC 1 cut(s) 115
Csp6I GTAC 5 cut(s) 288, 368, 1120, 1969, 2212
CspAI ACCGGT 1 cut(s) 281
CviAII CATG 5 cut(s) 271, 503, 898, 1019, 1813
CviQI GTAC 5 cut(s) 288, 368, 1120, 1969, 2212
DdeI CTNAG 4 cut(s) 40, 795, 1388, 1710
DinI GGCGCC 1 cut(s) 1877
DraIII CACNNNGTG 1 cut(s) 781
EaeI YGGCCR 1 cut(s) 1678
Eam1104I CTCTTC 4 cut(s) 545, 1200, 1454, 1842
EarI CTCTTC 4 cut(s) 545, 1200, 1454, 1842
Eco130I CCWWGG 2 cut(s) 310, 2157
Eco47I GGWCC 2 cut(s) 741, 2130
Eco57I CTGAAG 1 cut(s) 777
EcoO109I RGGNCCY 1 cut(s) 2130
EcoRII CCWGG 2 cut(s) 1237, 2006
EcoT14I CCWWGG 2 cut(s) 310, 2157
EgeI GGCGCC 1 cut(s) 1877
EheI GGCGCC 1 cut(s) 1877
ErhI CCWWGG 2 cut(s) 310, 2157
Esp3I CGTCTC 1 cut(s) 133
FaeI CATG 5 cut(s) 274, 506, 901, 1022, 1816
FaqI GGGAC 1 cut(s) 236
FatI CATG 5 cut(s) 270, 502, 897, 1018, 1812
FauNDI CATATG 3 cut(s) 1142, 1233, 1991
FbaI TGATCA 1 cut(s) 433
FblI GTMKAC 1 cut(s) 867
Fnu4HI GCNGC 5 cut(s) 28, 235, 1229, 1545, 2087
FokI GGATG 3 cut(s) 833, 1748, 1856
Fsp4HI GCNGC 5 cut(s) 28, 235, 1229, 1545, 2087
FspBI CTAG 5 cut(s) 110, 291, 1184, 1749, 2042
GlaI GCGC 2 cut(s) 92, 1877
GluI GCNGC 5 cut(s) 28, 235, 1229, 1545, 2087
GsuI CTGGAG 2 cut(s) 186, 1524
HaeII RGCGCY 1 cut(s) 1879
HaeIII GGCC 6 cut(s) 537, 1057, 1367, 1446, 1680, 2162
HapII CCGG 5 cut(s) 282, 1147, 1305, 1681, 2163
HgaI GACGC 1 cut(s) 115
HhaI GCGC 2 cut(s) 93, 1878
Hin1I GRCGYC 1 cut(s) 1876
Hin1II CATG 5 cut(s) 274, 506, 901, 1022, 1816
Hin6I GCGC 2 cut(s) 91, 1876
HinP1I GCGC 2 cut(s) 91, 1876
HincII GTYRAC 3 cut(s) 1129, 1574, 1978
HindII GTYRAC 3 cut(s) 1129, 1574, 1978
HindIII AAGCTT 1 cut(s) 1727
HinfI GANTC 9 cut(s) 12, 799, 814, 821, 1013, 1316, 1360, 1714, 1862
HpaII CCGG 5 cut(s) 282, 1147, 1305, 1681, 2163
HphI GGTGA 9 cut(s) 164, 333, 453, 671, 705, 1365, 1620, 1880, 2207
Hpy188I TCNGA 7 cut(s) 157, 741, 757, 796, 1162, 1424, 1711
Hpy188III TCNNGA 9 cut(s) 359, 503, 818, 1010, 1019, 1184, 1190, 1286, 2048
HpyAV CCTTC 8 cut(s) 194, 714, 851, 970, 1387, 1629, 2054, 2143
HpyCH4III ACNGT 4 cut(s) 52, 400, 944, 1103
HpyCH4IV ACGT 4 cut(s) 482, 937, 981, 2214
HpyCH4V TGCA 9 cut(s) 30, 531, 1231, 1440, 1472, 1788, 1885, 1995, 2089
HpyF10VI GCNNNNNNNGC 7 cut(s) 36, 123, 450, 1234, 1550, 1882, 2159
HpyF3I CTNAG 4 cut(s) 40, 795, 1388, 1710
HpySE526I ACGT 4 cut(s) 482, 937, 981, 2214
Hsp92I GRCGYC 1 cut(s) 1876
Hsp92II CATG 5 cut(s) 274, 506, 901, 1022, 1816
HspAI GCGC 2 cut(s) 91, 1876
KasI GGCGCC 1 cut(s) 1875
KroI GCCGGC 1 cut(s) 1680
KroNI GCCGGC 1 cut(s) 1682
Ksp22I TGATCA 1 cut(s) 433
LguI GCTCTTC 1 cut(s) 1842
LmnI GCTCC 4 cut(s) 4, 878, 1793, 2158
Lsp1109I GCAGC 4 cut(s) 14, 1215, 1556, 2073
LweI GCATC 4 cut(s) 335, 399, 1555, 1894
MaeI CTAG 5 cut(s) 110, 291, 1184, 1749, 2042
MaeII ACGT 4 cut(s) 482, 937, 981, 2214
MaeIII GTNAC 6 cut(s) 170, 221, 643, 938, 1555, 1868
MflI RGATCY 2 cut(s) 227, 752
MhlI GDGCHC 2 cut(s) 9, 1029
MluCI AATT 9 cut(s) 164, 516, 882, 1070, 1342, 1797, 1919, 2055, 2203
MluI ACGCGT 1 cut(s) 1774
Mly113I GGCGCC 1 cut(s) 1876
MlyI GAGTC 5 cut(s) 793, 1022, 1354, 1708, 1871
MmeI TCCRAC 4 cut(s) 180, 656, 788, 1703
MroNI GCCGGC 1 cut(s) 1680
MseI TTAA 4 cut(s) 1263, 1292, 1311, 2121
MslI CAYNNNNRTG 3 cut(s) 273, 927, 969
MspA1I CMGCKG 1 cut(s) 2096
MspCI CTTAAG 2 cut(s) 1262, 2120
MspI CCGG 5 cut(s) 282, 1147, 1305, 1681, 2163
MspR9I CCNGG 3 cut(s) 1239, 1305, 2008
MvaI CCWGG 2 cut(s) 1239, 2008
MvnI CGCG 2 cut(s) 93, 1776
MwoI GCNNNNNNNGC 7 cut(s) 36, 123, 450, 1234, 1550, 1882, 2159
NaeI GCCGGC 1 cut(s) 1682
NarI GGCGCC 1 cut(s) 1876
NciI CCSGG 1 cut(s) 1305
NdeI CATATG 3 cut(s) 1142, 1233, 1991
NgoMIV GCCGGC 1 cut(s) 1680
NlaIII CATG 5 cut(s) 274, 506, 901, 1022, 1816
NlaIV GGNNCC 5 cut(s) 280, 308, 1028, 1154, 1877
NmuCI GTSAC 4 cut(s) 170, 221, 938, 1868
NspI RCATGY 3 cut(s) 274, 901, 1816
OliI CACNNNNGTG 1 cut(s) 273
PagI TCATGA 2 cut(s) 502, 1018
PciSI GCTCTTC 1 cut(s) 1842
PcsI WCGNNNNNNNCGW 1 cut(s) 2020
PdiI GCCGGC 1 cut(s) 1682
PfeI GAWTC 4 cut(s) 12, 814, 821, 1316
PflMI CCANNNNNTGG 1 cut(s) 138
PinAI ACCGGT 1 cut(s) 281
PkrI GCNGC 5 cut(s) 29, 236, 1230, 1546, 2088
Ple19I CGATCG 1 cut(s) 2188
PleI GAGTC 5 cut(s) 793, 1021, 1354, 1708, 1870
PluTI GGCGCC 1 cut(s) 1879
PpsI GAGTC 5 cut(s) 793, 1021, 1354, 1708, 1870
Ppu21I YACGTR 1 cut(s) 2215
PpuMI RGGWCCY 1 cut(s) 2130
PsiI TTATAA 2 cut(s) 1257, 2115
Psp5II RGGWCCY 1 cut(s) 2130
Psp6I CCWGG 2 cut(s) 1237, 2006
PspGI CCWGG 2 cut(s) 1237, 2006
PspN4I GGNNCC 5 cut(s) 280, 308, 1028, 1154, 1877
PspPI GGNCC 2 cut(s) 741, 2130
PspPPI RGGWCCY 1 cut(s) 2130
PsrI GAACNNNNNNTAC 2 cut(s) 271, 303
PstNI CAGNNNCTG 3 cut(s) 209, 231, 1550
PsuI RGATCY 2 cut(s) 227, 752
PvuI CGATCG 1 cut(s) 2188
PvuII CAGCTG 1 cut(s) 2096
RsaI GTAC 5 cut(s) 289, 369, 1121, 1970, 2213
RsaNI GTAC 5 cut(s) 288, 368, 1120, 1969, 2212
RseI CAYNNNNRTG 3 cut(s) 273, 927, 969
SapI GCTCTTC 1 cut(s) 1842
SaqAI TTAA 4 cut(s) 1263, 1292, 1311, 2121
SatI GCNGC 5 cut(s) 28, 235, 1229, 1545, 2087
Sau96I GGNCC 2 cut(s) 741, 2130
ScaI AGTACT 1 cut(s) 289
SchI GAGTC 5 cut(s) 793, 1022, 1354, 1708, 1871
ScrFI CCNGG 3 cut(s) 1239, 1305, 2008
SduI GDGCHC 2 cut(s) 9, 1029
SfaNI GCATC 4 cut(s) 335, 399, 1555, 1894
SfoI GGCGCC 1 cut(s) 1877
SinI GGWCC 2 cut(s) 741, 2130
SmiMI CAYNNNNRTG 3 cut(s) 273, 927, 969
SmlI CTYRAG 3 cut(s) 1262, 2046, 2120
SmoI CTYRAG 3 cut(s) 1262, 2046, 2120
SpeI ACTAGT 1 cut(s) 290
Sse9I AATT 9 cut(s) 164, 516, 882, 1070, 1342, 1797, 1919, 2055, 2203
SsiI CCGC 6 cut(s) 44, 115, 175, 235, 651, 1643
SspDI GGCGCC 1 cut(s) 1875
SspI AATATT 1 cut(s) 301
SspMI CTAG 5 cut(s) 110, 291, 1184, 1749, 2042
StyD4I CCNGG 3 cut(s) 1237, 1303, 2006
StyI CCWWGG 2 cut(s) 310, 2157
TaaI ACNGT 4 cut(s) 52, 400, 944, 1103
TaiI ACGT 4 cut(s) 485, 940, 984, 2217
TaqI TCGA 7 cut(s) 819, 1165, 1348, 1717, 2014, 2023, 2188
TasI AATT 9 cut(s) 164, 516, 882, 1070, 1342, 1797, 1919, 2055, 2203
TatI WGTACW 2 cut(s) 287, 367
TauI GCSGC 1 cut(s) 237
TfiI GAWTC 4 cut(s) 12, 814, 821, 1316
Tru1I TTAA 4 cut(s) 1263, 1292, 1311, 2121
Tru9I TTAA 4 cut(s) 1263, 1292, 1311, 2121
TscAI CASTG 4 cut(s) 143, 1396, 1808, 2002
TseFI GTSAC 4 cut(s) 170, 221, 938, 1868
TseI GCWGC 4 cut(s) 27, 1228, 1544, 2086
Tsp45I GTSAC 4 cut(s) 170, 221, 938, 1868
TspGWI ACGGA 1 cut(s) 1680
TspRI CASTG 4 cut(s) 143, 1396, 1808, 2002
Van91I CCANNNNNTGG 1 cut(s) 138
Vha464I CTTAAG 2 cut(s) 1262, 2120
VpaK11BI GGWCC 2 cut(s) 741, 2130
XapI RAATTY 2 cut(s) 164, 1070
XbaI TCTAGA 1 cut(s) 1183
XceI RCATGY 3 cut(s) 274, 901, 1816
XcmI CCANNNNNNNNNTGG 3 cut(s) 326, 383, 530
XmiI GTMKAC 1 cut(s) 867
XspI CTAG 5 cut(s) 110, 291, 1184, 1749, 2042
ZrmI AGTACT 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.