Rroxscaffold_2G00078100

F-box protein At5g07610-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000237
Physical Location & Seq
Reverse (-)
1512544 .. 1515762
3219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00078100.1

Sequence Viewer

Length: 1866 bp
ATGGAATACAGATTCTACCCCAAACGCTGCACCAGTAGCTTAGCGGAAACCGTAGCCAGCATAGAACAAGTCCTTACTGAAATCCTTGTGCGCGTGCCAGCTAAACCTCTAGTCCGCTTCAAATGTGTCTCCAAGCATTGGCTCTCTCTTATTTCCGACCCTAAATTCTGTCACCGCCACACCCTTCAAAACCCTAACACTCCAGTCTCTGCTGTCTTTTGTGACAGATCCTGCCGCCCCTTTTGTTTCGTCCCTATTGATTTGGATCACATGCGTGGAACCGGTAGTACTAGTAGTAATATTAAGAACCATGGAAACCAAAACCCATCTGGGTCTGGTTCTCCTACTTGTAATCCTCTTGATTTTGTACAGAACCAATATGATTATGGCATCAAAACTGTCCACACCTTTCCTGTCAATCGTCTTCATTTTGATCACAAAAGCCCATCTCGCTCTGGTTCACCCCCTTTCAATCCTCTTACGTTTGCTCAAAACCAATATCATGATGACATCATAATTGTCCAGTCCTGCAATGGCCTCTTCCTGTGTCGTCTTTTTCATAATAAACTGAACCCCCCATATCTTATTTTCAATCCTACAACAAATCAGTTCTCTACACTTATTCCTCCTCCAACTACTGCTGTTACCACCACTACTGGTGAACGAAAAGAACCCTATGTCATCTCTACTGCTTTGGCTTTTGACCCTTCCAAATCACCTCATTACAAGGTGGTCTGTCTTCGGACCATTGATGGATCTGAAGACGGATCTATCTATCACATAGTGATATATTCATCTGAGACTCAAAGTTGGAGGATTCTCGATTCTTCTTTCAAGAGGGTATTTTGCATCCTCTATGCACGCGTGGTATACTGGAATGGAGCAATTCATTGGTTAGGCATGTTTAGTGAGGTAGCATACTTTCACATAGATGAAGAACGTGACGGTTTTATTGGTATCCCTCCTCACTTTTATGAGAAGGACGTTCACAGGAGGAAATGTAGATACTTTCAGGTGTCTCATGACGGGCACCATTTGTATCTTATTGATATATATCGGCCTTGTATTACTAAATTTGAAGTGTTGGAGATGGGGAAAGACTACTCTGGTTGGTTTGTCAAGTACCTTGTTGACATTGATCCCATATGCCGGTGGAACCTGTCTGATCGATTTGTTGTTCTATTTCTAGATCAAGATGAAAATGAAGAAGAGGAAAGTTCATCTCTGTTGCTGCATATGCCTGGAAAACTCATTTCTTATAATCTTAAGAGCAAGACCTACAAATCTCTTGATTTAACTCCCAAGCCCGGAGTTAATGATTCTCTCTTACGAGTTGAAGCATCTAATTATCGATATATGGAGACTCTGGCCTGTTCACCCTTCAATCCTCTCAGTGTAGTTCAAAACCAATATAATGGTCACATCAGAGTTATCCAGTCCTGCAACGGCCTCTTCTTGTGCCATCTTTTGAGTGCAAAAGAAGTGAAGCCCCCATATTTTATTCTCAATCCCACAACCAACCAGTTCAACACACTTATTCCTCCAGCAGATACTGCTGTTACTAACGATGCTGGTCAACAAGTAGAACCCTATATCATCATTGCTTTGGCTTTTGACCCTTCCAAATCACCTCATTACAAGGCGGTCTGCCTACGCAACAATGACGGAACAAAATATGGCCGGCACTTCCACATACTGATATATTCGTCTGAGACTCGAAGTTGGAAGCTTCTTGGTTCTTCTTTCTCTAGGGGATTTCACATCCTCTACAAACGCGTTGTTTACTGCAATGGAGCAATTCACTGGTTAGGCATGTATAGTGGGTTGTCTTACTTTCGCGTGGATGAAGAGCGTATTGGAGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

621

Amino Acids

71.22

Weight (kDa)

8.38

Isoelectric Point (pI)

49.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 58 4.1e-06 F-box domain
FBA_1 PF07734 164 - 300 1.8e-11 F-box associated beta propeller domain
FBA_3 PF08268 164 - 321 4.5e-08 F-box associated beta propeller domain
FBA_1 PF07734 471 - 604 7.7e-10 F-box associated beta propeller domain
FBA_3 PF08268 473 - 606 5.8e-06 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000237)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G14315
fragaria_vesca FvH4_2g35920 FvH4_2g35930 FvH4_2g35940 FvH4_2g35950 FvH4_3g00321 FvH4_3g32490 FvH4_3g43790 FvH4_3g43790 FvH4_3g43790 FvH4_4g06360 FvH4_4g06370 FvH4_4g06370 FvH4_6g52062 FvH4_6g52062 FvH4_6g52080 FvH4_6g52610 FvH4_6g52830 FvH4_6g52861 FvH4_6g52861 FvH4_6g52862 FvH4_6g52871 FvH4_6g52880 FvH4_6g52931 FvH4_6g52941 FvH4_6g52942 FvH4_6g53001 FvH4_6g53021 FvH4_6g53072 FvH4_6g53610 FvH4_6g53620 FvH4_6g53620 FvH4_6g53651 FvH4_6g53660
malus_domestica MD13G1235400.v1.1 MD16G1240000.v1.1
prunus_persica Prupe.1G066400_v2.0.a1
pyrus_communis pycom13g20790 pycom16g20090
rosa_chinensis RchiOBHm_Chr2g0174451 RchiOBHm_Chr2g0174531 RchiOBHm_Chr2g0174701 RchiOBHm_Chr2g0174881 RchiOBHm_Chr2g0174951 RchiOBHm_Chr4g0396041 RchiOBHm_Chr4g0396501 RchiOBHm_Chr4g0398111 RchiOBHm_Chr5g0059531 RchiOBHm_Chr6g0264241
rosa_laevigata RLG00000009385 RLG00000009528 RLG00000009532 RLG00000009537 RLG00000009541 RLG00000009577 RLG00000022267 RLG00000022268 RLG00000022269 RLG00000022273 RLG00000022287 RLG00000022289 RLG00000032767 RLG00000035297
rosa_multiflora Rmu_co8114622.1_g000001 Rmu_co8160300.1_g000001 Rmu_co8411703.1_g000001 Rmu_sc0001217.1_g000015 Rmu_sc0001533.1_g000002 Rmu_sc0003649.1_g000012 Rmu_sc0003649.1_g000015 Rmu_sc0003649.1_g000017 Rmu_sc0003649.1_g000020 Rmu_sc0006325.1_g000006 Rmu_sc0009506.1_g000001 Rmu_sc0009766.1_g000006 Rmu_sc0015078.1_g000002 Rmu_sc0015594.1_g000006 Rmu_sc0015594.1_g000007
rosa_roxburghii Rroxscaffold_1G00021050 Rroxscaffold_2G00077800 Rroxscaffold_2G00077920 Rroxscaffold_2G00078070 Rroxscaffold_2G00078100 Rroxscaffold_2G00078130 Rroxscaffold_2G00078170 Rroxscaffold_3G00220050 Rroxscaffold_5G00340840 Rroxscaffold_5G00340850 Rroxscaffold_5G00341370 Rroxscaffold_5G00343010 Rroxscaffold_5G00381750
rosa_rugosa Rorug02G0577300 Rorug02G0577400 Rorug02G0577700 Rorug02G0577800 Rorug02G0579000 Rorug03G0352900 Rorug03G0352900 Rorug04G0006000 Rorug05G0323000
rosa_samantha Rh2AG658100 Rh2AG658400 Rh2AG658600 Rh2AG660200 Rh2AG663100 Rh2CG632100 Rh2CG632600 Rh2CG632700 Rh2CG634300 Rh2CG635600 Rh2DG682800 Rh2DG683300 Rh2DG686000 Rh3BG068500 Rh3CG066900 Rh4AG064800 Rh4AG065900 Rh4AG068900 Rh4AG083000 Rh4BG063600 Rh4BG063700 Rh4BG067000 Rh4BG080700 Rh4DG060400 Rh4DG060500 Rh4DG075600 Rh5CG423600
rosa_wichuraiana Rw2G053920 Rw2G053940 Rw2G053950 Rw2G054080 Rw2G054210 Rw4G000460 Rw4G005260 Rw4G005270 Rw4G005550 Rw4G006900 Rw5G036490 Rw5G036550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1260
AccB1I GGYRCC 1 cut(s) 1029
AccB7I CCANNNNNTGG 1 cut(s) 138
AccI GTMKAC 1 cut(s) 870
AccII CGCG 4 cut(s) 93, 864, 1776, 1839
AciI CCGC 5 cut(s) 44, 115, 175, 235, 1643
AclWI GGATC 5 cut(s) 222, 273, 763, 775, 1133
AcoI YGGCCR 1 cut(s) 1678
AcsI RAATTY 2 cut(s) 164, 1073
AcuI CTGAAG 1 cut(s) 780
AdeI CACNNNGTG 1 cut(s) 784
AfaI GTAC 3 cut(s) 289, 369, 1124
AfiI CCNNNNNNNGG 3 cut(s) 138, 1149, 1307
AflII CTTAAG 1 cut(s) 1265
AflIII ACRYGT 2 cut(s) 862, 1774
AgeI ACCGGT 1 cut(s) 281
AhlI ACTAGT 1 cut(s) 290
AjnI CCWGG 1 cut(s) 1240
AjuI GAANNNNNNNTTGG 1 cut(s) 1839
AleI CACNNNNGTG 1 cut(s) 273
AluBI AGCT 3 cut(s) 39, 101, 1729
AluI AGCT 3 cut(s) 39, 101, 1729
Alw26I GTCTC 6 cut(s) 133, 211, 794, 1023, 1355, 1706
AlwI GGATC 5 cut(s) 222, 273, 763, 775, 1133
AlwNI CAGNNNCTG 3 cut(s) 209, 231, 1553
AoxI GGCC 5 cut(s) 535, 1058, 1368, 1447, 1678
ApeKI GCWGC 2 cut(s) 27, 1231
ApoI RAATTY 2 cut(s) 164, 1073
AsiGI ACCGGT 1 cut(s) 281
AspLEI GCGC 1 cut(s) 93
AspS9I GGNCC 1 cut(s) 744
AsuC2I CCSGG 1 cut(s) 1308
AsuHPI GGTGA 6 cut(s) 164, 453, 671, 708, 1368, 1620
AvaII GGWCC 1 cut(s) 744
BaeGI GKGCMC 1 cut(s) 1032
BaeI ACNNNNGTAYC 2 cut(s) 1542, 1575
BanI GGYRCC 1 cut(s) 1029
BbsI GAAGAC 3 cut(s) 416, 731, 768
BbvI GCAGC 2 cut(s) 14, 1218
BccI CCATC 5 cut(s) 334, 454, 746, 1084, 1470
BceAI ACGGC 1 cut(s) 1462
BciT130I CCWGG 1 cut(s) 1242
BciVI GTATCC 1 cut(s) 968
BclI TGATCA 1 cut(s) 433
BcnI CCSGG 1 cut(s) 1308
BcoDI GTCTC 6 cut(s) 133, 211, 794, 1023, 1355, 1706
BcuI ACTAGT 1 cut(s) 290
BfaI CTAG 4 cut(s) 110, 291, 1187, 1749
BfrI CTTAAG 1 cut(s) 1265
BfuI GTATCC 1 cut(s) 968
BisI GCNGC 3 cut(s) 28, 235, 1232
BlpI GCTNAGC 1 cut(s) 40
BlsI GCNGC 3 cut(s) 29, 236, 1233
BmcAI AGTACT 1 cut(s) 289
Bme1390I CCNGG 2 cut(s) 1242, 1308
Bme18I GGWCC 1 cut(s) 744
BmgT120I GGNCC 1 cut(s) 744
BmiI GGNNCC 3 cut(s) 280, 1031, 1157
BmrFI CCNGG 2 cut(s) 1242, 1308
BmsI GCATC 4 cut(s) 399, 858, 1349, 1558
BpiI GAAGAC 3 cut(s) 416, 731, 768
BpmI CTGGAG 2 cut(s) 186, 1527
Bpu1102I GCTNAGC 1 cut(s) 40
BpuMI CCSGG 1 cut(s) 1308
Bsa29I ATCGAT 2 cut(s) 1168, 1351
BsaBI GATNNNNATC 2 cut(s) 264, 1053
BsaJI CCNNGG 1 cut(s) 310
BsaWI WCCGGW 1 cut(s) 281
BsaXI ACNNNNNCTCC 2 cut(s) 985, 1015
Bsc4I CCNNNNNNNGG 3 cut(s) 138, 1149, 1307
Bse118I RCCGGY 3 cut(s) 281, 1149, 1680
Bse1I ACTGG 8 cut(s) 33, 203, 523, 661, 878, 1435, 1522, 1808
Bse3DI GCAATG 3 cut(s) 538, 1599, 1795
Bse8I GATNNNNATC 2 cut(s) 264, 1053
BseBI CCWGG 1 cut(s) 1242
BseCI ATCGAT 2 cut(s) 1168, 1351
BseDI CCNNGG 1 cut(s) 310
BseGI GGATG 3 cut(s) 849, 1761, 1849
BseJI GATNNNNATC 2 cut(s) 264, 1053
BseLI CCNNNNNNNGG 3 cut(s) 138, 1149, 1307
BseMI GCAATG 3 cut(s) 538, 1599, 1795
BseMII CTCAG 3 cut(s) 789, 1405, 1701
BseNI ACTGG 8 cut(s) 33, 203, 523, 661, 878, 1435, 1522, 1808
BseRI GAGGAG 2 cut(s) 618, 954
BseSI GKGCMC 1 cut(s) 1032
BseXI GCAGC 2 cut(s) 14, 1218
BsgI GTGCAG 1 cut(s) 13
Bsh1236I CGCG 4 cut(s) 93, 864, 1776, 1839
BshFI GGCC 5 cut(s) 537, 1060, 1370, 1449, 1680
BshNI GGYRCC 1 cut(s) 1029
BshTI ACCGGT 1 cut(s) 281
BshVI ATCGAT 2 cut(s) 1168, 1351
BsiSI CCGG 4 cut(s) 282, 1150, 1308, 1681
BslFI GGGAC 1 cut(s) 236
BslI CCNNNNNNNGG 3 cut(s) 138, 1149, 1307
BsmAI GTCTC 6 cut(s) 133, 211, 794, 1023, 1355, 1706
BsmFI GGGAC 1 cut(s) 236
BsnI GGCC 5 cut(s) 537, 1060, 1370, 1449, 1680
Bsp1286I GDGCHC 1 cut(s) 1032
Bsp1407I TGTACA 1 cut(s) 367
Bsp143I GATC 8 cut(s) 227, 265, 433, 755, 767, 1138, 1165, 1189
Bsp1720I GCTNAGC 1 cut(s) 40
Bsp19I CCATGG 1 cut(s) 310
BspACI CCGC 5 cut(s) 44, 115, 175, 235, 1643
BspANI GGCC 5 cut(s) 537, 1060, 1370, 1449, 1680
BspCNI CTCAG 3 cut(s) 790, 1404, 1702
BspDI ATCGAT 2 cut(s) 1168, 1351
BspFNI CGCG 4 cut(s) 93, 864, 1776, 1839
BspHI TCATGA 2 cut(s) 502, 1021
BspLI GGNNCC 3 cut(s) 280, 1031, 1157
BspPI GGATC 5 cut(s) 222, 273, 763, 775, 1133
BspQI GCTCTTC 1 cut(s) 1842
BspT107I GGYRCC 1 cut(s) 1029
BspTI CTTAAG 1 cut(s) 1265
BsrDI GCAATG 3 cut(s) 538, 1599, 1795
BsrFI RCCGGY 3 cut(s) 281, 1149, 1680
BsrGI TGTACA 1 cut(s) 367
BsrI ACTGG 8 cut(s) 33, 203, 523, 661, 878, 1435, 1522, 1808
BssAI RCCGGY 3 cut(s) 281, 1149, 1680
BssECI CCNNGG 1 cut(s) 310
BssMI GATC 8 cut(s) 227, 265, 433, 755, 767, 1138, 1165, 1189
BssNAI GTATAC 1 cut(s) 871
BssT1I CCWWGG 1 cut(s) 310
Bst1107I GTATAC 1 cut(s) 871
Bst2UI CCWGG 1 cut(s) 1242
Bst4CI ACNGT 3 cut(s) 52, 400, 947
Bst6I CTCTTC 4 cut(s) 545, 1203, 1457, 1842
BstAFI CTTAAG 1 cut(s) 1265
BstAPI GCANNNNNTGC 1 cut(s) 1553
BstAUI TGTACA 1 cut(s) 367
BstC8I GCNNGC 5 cut(s) 58, 95, 99, 862, 1682
BstDEI CTNAG 4 cut(s) 40, 798, 1391, 1710
BstDSI CCRYGG 1 cut(s) 310
BstF5I GGATG 3 cut(s) 849, 1761, 1849
BstFNI CGCG 4 cut(s) 93, 864, 1776, 1839
BstHHI GCGC 1 cut(s) 93
BstKTI GATC 8 cut(s) 230, 268, 436, 758, 770, 1141, 1168, 1192
BstMAI GTCTC 6 cut(s) 133, 211, 794, 1023, 1355, 1706
BstMBI GATC 8 cut(s) 227, 265, 433, 755, 767, 1138, 1165, 1189
BstMWI GCNNNNNNNGC 4 cut(s) 36, 450, 1237, 1553
BstNI CCWGG 1 cut(s) 1242
BstNSI RCATGY 3 cut(s) 274, 904, 1816
BstSCI CCNGG 2 cut(s) 1240, 1306
BstSLI GKGCMC 1 cut(s) 1032
BstUI CGCG 4 cut(s) 93, 864, 1776, 1839
BstV1I GCAGC 2 cut(s) 14, 1218
BstV2I GAAGAC 3 cut(s) 416, 731, 768
BstX2I RGATCY 3 cut(s) 227, 755, 767
BstXI CCANNNNNNTGG 1 cut(s) 1415
BstYI RGATCY 3 cut(s) 227, 755, 767
BstZ17I GTATAC 1 cut(s) 871
Bsu15I ATCGAT 2 cut(s) 1168, 1351
BsuI GTATCC 1 cut(s) 968
BsuRI GGCC 5 cut(s) 537, 1060, 1370, 1449, 1680
BsuTUI ATCGAT 2 cut(s) 1168, 1351
BtgI CCRYGG 1 cut(s) 310
BtsCI GGATG 3 cut(s) 849, 1761, 1849
BtsIMutI CAGTG 2 cut(s) 1399, 1801
Cac8I GCNNGC 5 cut(s) 58, 95, 99, 862, 1682
CaiI CAGNNNCTG 3 cut(s) 209, 231, 1553
CciI TCATGA 2 cut(s) 502, 1021
CfoI GCGC 1 cut(s) 93
Cfr10I RCCGGY 3 cut(s) 281, 1149, 1680
Cfr13I GGNCC 1 cut(s) 744
ClaI ATCGAT 2 cut(s) 1168, 1351
Csp6I GTAC 3 cut(s) 288, 368, 1123
CspAI ACCGGT 1 cut(s) 281
CviAII CATG 6 cut(s) 271, 311, 503, 901, 1022, 1813
CviQI GTAC 3 cut(s) 288, 368, 1123
DdeI CTNAG 4 cut(s) 40, 798, 1391, 1710
DpnI GATC 8 cut(s) 229, 267, 435, 757, 769, 1140, 1167, 1191
DpnII GATC 8 cut(s) 227, 265, 433, 755, 767, 1138, 1165, 1189
DraIII CACNNNGTG 1 cut(s) 784
EaeI YGGCCR 1 cut(s) 1678
Eam1104I CTCTTC 4 cut(s) 545, 1203, 1457, 1842
EarI CTCTTC 4 cut(s) 545, 1203, 1457, 1842
Eco130I CCWWGG 1 cut(s) 310
Eco47I GGWCC 1 cut(s) 744
Eco57I CTGAAG 1 cut(s) 780
EcoRII CCWGG 1 cut(s) 1240
EcoT14I CCWWGG 1 cut(s) 310
ErhI CCWWGG 1 cut(s) 310
FaeI CATG 6 cut(s) 274, 314, 506, 904, 1025, 1816
FaqI GGGAC 1 cut(s) 236
FatI CATG 6 cut(s) 270, 310, 502, 900, 1021, 1812
FauNDI CATATG 2 cut(s) 1145, 1236
FbaI TGATCA 1 cut(s) 433
FblI GTMKAC 1 cut(s) 870
Fnu4HI GCNGC 3 cut(s) 28, 235, 1232
FokI GGATG 3 cut(s) 836, 1748, 1856
Fsp4HI GCNGC 3 cut(s) 28, 235, 1232
FspBI CTAG 4 cut(s) 110, 291, 1187, 1749
GlaI GCGC 1 cut(s) 92
GluI GCNGC 3 cut(s) 28, 235, 1232
GsuI CTGGAG 2 cut(s) 186, 1527
HaeIII GGCC 5 cut(s) 537, 1060, 1370, 1449, 1680
HapII CCGG 4 cut(s) 282, 1150, 1308, 1681
HhaI GCGC 1 cut(s) 93
Hin1II CATG 6 cut(s) 274, 314, 506, 904, 1025, 1816
Hin6I GCGC 1 cut(s) 91
HinP1I GCGC 1 cut(s) 91
HincII GTYRAC 2 cut(s) 1132, 1577
HindII GTYRAC 2 cut(s) 1132, 1577
HindIII AAGCTT 1 cut(s) 1727
HinfI GANTC 7 cut(s) 12, 802, 817, 824, 1319, 1363, 1714
HpaII CCGG 4 cut(s) 282, 1150, 1308, 1681
HphI GGTGA 6 cut(s) 164, 453, 671, 708, 1368, 1620
Hpy166II GTNNAC 9 cut(s) 403, 461, 662, 871, 988, 1132, 1376, 1577, 1783
Hpy188I TCNGA 7 cut(s) 157, 744, 760, 799, 1165, 1427, 1711
Hpy188III TCNNGA 8 cut(s) 359, 503, 821, 835, 1022, 1187, 1193, 1289
Hpy8I GTNNAC 9 cut(s) 403, 461, 662, 871, 988, 1132, 1376, 1577, 1783
HpyAV CCTTC 5 cut(s) 194, 717, 973, 1390, 1629
HpyCH4III ACNGT 3 cut(s) 52, 400, 947
HpyCH4IV ACGT 3 cut(s) 482, 940, 984
HpyCH4V TGCA 8 cut(s) 30, 531, 849, 860, 1234, 1443, 1475, 1788
HpyF10VI GCNNNNNNNGC 4 cut(s) 36, 450, 1237, 1553
HpyF3I CTNAG 4 cut(s) 40, 798, 1391, 1710
HpySE526I ACGT 3 cut(s) 482, 940, 984
Hsp92II CATG 6 cut(s) 274, 314, 506, 904, 1025, 1816
HspAI GCGC 1 cut(s) 91
KroI GCCGGC 1 cut(s) 1680
KroNI GCCGGC 1 cut(s) 1682
Ksp22I TGATCA 1 cut(s) 433
Kzo9I GATC 8 cut(s) 227, 265, 433, 755, 767, 1138, 1165, 1189
LguI GCTCTTC 1 cut(s) 1842
LmnI GCTCC 2 cut(s) 881, 1793
Lsp1109I GCAGC 2 cut(s) 14, 1218
LweI GCATC 4 cut(s) 399, 858, 1349, 1558
MaeI CTAG 4 cut(s) 110, 291, 1187, 1749
MaeII ACGT 3 cut(s) 482, 940, 984
MaeIII GTNAC 6 cut(s) 170, 221, 643, 941, 1418, 1558
MalI GATC 8 cut(s) 229, 267, 435, 757, 769, 1140, 1167, 1191
MboI GATC 8 cut(s) 227, 265, 433, 755, 767, 1138, 1165, 1189
MflI RGATCY 3 cut(s) 227, 755, 767
MhlI GDGCHC 1 cut(s) 1032
MluCI AATT 6 cut(s) 164, 516, 885, 1073, 1345, 1797
MluI ACGCGT 2 cut(s) 862, 1774
MlyI GAGTC 3 cut(s) 796, 1357, 1708
MmeI TCCRAC 5 cut(s) 180, 656, 791, 1065, 1703
MroNI GCCGGC 1 cut(s) 1680
MseI TTAA 4 cut(s) 303, 1266, 1295, 1314
MslI CAYNNNNRTG 3 cut(s) 273, 930, 972
MspCI CTTAAG 1 cut(s) 1265
MspI CCGG 4 cut(s) 282, 1150, 1308, 1681
MspR9I CCNGG 2 cut(s) 1242, 1308
MvaI CCWGG 1 cut(s) 1242
MvnI CGCG 4 cut(s) 93, 864, 1776, 1839
MwoI GCNNNNNNNGC 4 cut(s) 36, 450, 1237, 1553
NaeI GCCGGC 1 cut(s) 1682
NciI CCSGG 1 cut(s) 1308
NcoI CCATGG 1 cut(s) 310
NdeI CATATG 2 cut(s) 1145, 1236
NdeII GATC 8 cut(s) 227, 265, 433, 755, 767, 1138, 1165, 1189
NgoMIV GCCGGC 1 cut(s) 1680
NlaIII CATG 6 cut(s) 274, 314, 506, 904, 1025, 1816
NlaIV GGNNCC 3 cut(s) 280, 1031, 1157
NmuCI GTSAC 4 cut(s) 170, 221, 941, 1418
NspI RCATGY 3 cut(s) 274, 904, 1816
OliI CACNNNNGTG 1 cut(s) 273
PagI TCATGA 2 cut(s) 502, 1021
PciSI GCTCTTC 1 cut(s) 1842
PdiI GCCGGC 1 cut(s) 1682
PfeI GAWTC 4 cut(s) 12, 817, 824, 1319
PflMI CCANNNNNTGG 1 cut(s) 138
PinAI ACCGGT 1 cut(s) 281
PkrI GCNGC 3 cut(s) 29, 236, 1233
PleI GAGTC 3 cut(s) 796, 1357, 1708
PpsI GAGTC 3 cut(s) 796, 1357, 1708
PsiI TTATAA 1 cut(s) 1260
Psp6I CCWGG 1 cut(s) 1240
PspGI CCWGG 1 cut(s) 1240
PspN4I GGNNCC 3 cut(s) 280, 1031, 1157
PspPI GGNCC 1 cut(s) 744
PsrI GAACNNNNNNTAC 2 cut(s) 271, 303
PstNI CAGNNNCTG 3 cut(s) 209, 231, 1553
PsuI RGATCY 3 cut(s) 227, 755, 767
RsaI GTAC 3 cut(s) 289, 369, 1124
RsaNI GTAC 3 cut(s) 288, 368, 1123
RseI CAYNNNNRTG 3 cut(s) 273, 930, 972
SapI GCTCTTC 1 cut(s) 1842
SaqAI TTAA 4 cut(s) 303, 1266, 1295, 1314
SatI GCNGC 3 cut(s) 28, 235, 1232
Sau3AI GATC 8 cut(s) 227, 265, 433, 755, 767, 1138, 1165, 1189
Sau96I GGNCC 1 cut(s) 744
ScaI AGTACT 1 cut(s) 289
SchI GAGTC 3 cut(s) 796, 1357, 1708
ScrFI CCNGG 2 cut(s) 1242, 1308
SduI GDGCHC 1 cut(s) 1032
SfaNI GCATC 4 cut(s) 399, 858, 1349, 1558
SinI GGWCC 1 cut(s) 744
SmiMI CAYNNNNRTG 3 cut(s) 273, 930, 972
SmlI CTYRAG 1 cut(s) 1265
SmoI CTYRAG 1 cut(s) 1265
SpeI ACTAGT 1 cut(s) 290
Sse9I AATT 6 cut(s) 164, 516, 885, 1073, 1345, 1797
SsiI CCGC 5 cut(s) 44, 115, 175, 235, 1643
SspI AATATT 1 cut(s) 301
SspMI CTAG 4 cut(s) 110, 291, 1187, 1749
StyD4I CCNGG 2 cut(s) 1240, 1306
StyI CCWWGG 1 cut(s) 310
TaaI ACNGT 3 cut(s) 52, 400, 947
TaiI ACGT 3 cut(s) 485, 943, 987
TaqI TCGA 4 cut(s) 822, 1168, 1351, 1717
TasI AATT 6 cut(s) 164, 516, 885, 1073, 1345, 1797
TatI WGTACW 2 cut(s) 287, 367
TauI GCSGC 1 cut(s) 237
TfiI GAWTC 4 cut(s) 12, 817, 824, 1319
Tru1I TTAA 4 cut(s) 303, 1266, 1295, 1314
Tru9I TTAA 4 cut(s) 303, 1266, 1295, 1314
TscAI CASTG 2 cut(s) 1399, 1808
TseFI GTSAC 4 cut(s) 170, 221, 941, 1418
TseI GCWGC 2 cut(s) 27, 1231
Tsp45I GTSAC 4 cut(s) 170, 221, 941, 1418
TspDTI ATGAA 9 cut(s) 416, 548, 783, 878, 948, 1209, 1212, 1218, 1860
TspGWI ACGGA 2 cut(s) 780, 1680
TspRI CASTG 2 cut(s) 1399, 1808
Van91I CCANNNNNTGG 1 cut(s) 138
Vha464I CTTAAG 1 cut(s) 1265
VpaK11BI GGWCC 1 cut(s) 744
XapI RAATTY 2 cut(s) 164, 1073
XbaI TCTAGA 1 cut(s) 1186
XceI RCATGY 3 cut(s) 274, 904, 1816
XcmI CCANNNNNNNNNTGG 3 cut(s) 326, 383, 530
XmiI GTMKAC 1 cut(s) 870
XspI CTAG 4 cut(s) 110, 291, 1187, 1749
ZrmI AGTACT 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.