F-box protein At5g07610-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 49 - 85 | 6.9e-08 | F-box domain |
| FBA_3 | PF08268 | 104 - 272 | 3.2e-11 | F-box associated beta propeller domain |
| FBA_1 | PF07734 | 132 - 270 | 3e-11 | F-box associated beta propeller domain |
| b-prop_At3g26010-like | PF24750 | 139 - 271 | 2.4e-06 | F-box protein At3g26010-like, beta-propeller |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 636, 746, 1170 |
| Acc16I | TGCGCA | 1 cut(s) | 37 |
| Acc65I | GGTACC | 1 cut(s) | 897 |
| AccB1I | GGYRCC | 2 cut(s) | 175, 897 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 219 |
| AccII | CGCG | 1 cut(s) | 376 |
| AciI | CCGC | 7 cut(s) | 63, 172, 196, 256, 291, 936, 1056 |
| AclWI | GGATC | 2 cut(s) | 303, 376 |
| AcoI | YGGCCR | 1 cut(s) | 937 |
| AcsI | RAATTY | 2 cut(s) | 245, 980 |
| AfaI | GTAC | 5 cut(s) | 88, 478, 899, 1031, 1156 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 172, 219 |
| AflII | CTTAAG | 1 cut(s) | 1175 |
| AgsI | TTSAA | 3 cut(s) | 202, 401, 986 |
| AhlI | ACTAGT | 2 cut(s) | 479, 1225 |
| AjnI | CCWGG | 2 cut(s) | 810, 1150 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 263, 295 |
| AluBI | AGCT | 3 cut(s) | 182, 548, 850 |
| AluI | AGCT | 3 cut(s) | 182, 548, 850 |
| Alw21I | GWGCWC | 1 cut(s) | 604 |
| Alw26I | GTCTC | 4 cut(s) | 292, 647, 704, 1250 |
| AlwI | GGATC | 2 cut(s) | 303, 376 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 551 |
| AoxI | GGCC | 3 cut(s) | 442, 808, 937 |
| ApeKI | GCWGC | 7 cut(s) | 60, 108, 378, 548, 551, 554, 1141 |
| ApoI | RAATTY | 2 cut(s) | 245, 980 |
| Asp718I | GGTACC | 1 cut(s) | 897 |
| AspLEI | GCGC | 3 cut(s) | 38, 378, 794 |
| AspS9I | GGNCC | 1 cut(s) | 193 |
| AsuC2I | CCSGG | 1 cut(s) | 366 |
| AsuHPI | GGTGA | 3 cut(s) | 245, 314, 618 |
| AvaII | GGWCC | 1 cut(s) | 193 |
| BanI | GGYRCC | 2 cut(s) | 175, 897 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 881, 913 |
| Bbv12I | GWGCWC | 1 cut(s) | 604 |
| BbvI | GCAGC | 7 cut(s) | 72, 120, 365, 535, 538, 541, 1128 |
| BccI | CCATC | 4 cut(s) | 335, 465, 470, 991 |
| BceAI | ACGGC | 1 cut(s) | 805 |
| BciT130I | CCWGG | 2 cut(s) | 812, 1152 |
| BclI | TGATCA | 2 cut(s) | 343, 1213 |
| BcnI | CCSGG | 1 cut(s) | 366 |
| BcoDI | GTCTC | 4 cut(s) | 292, 647, 704, 1250 |
| BcuI | ACTAGT | 2 cut(s) | 479, 1225 |
| BfaI | CTAG | 3 cut(s) | 480, 1043, 1226 |
| BfmI | CTRYAG | 1 cut(s) | 82 |
| BfrI | CTTAAG | 1 cut(s) | 1175 |
| BisI | GCNGC | 8 cut(s) | 61, 109, 379, 549, 552, 555, 937, 1142 |
| BlsI | GCNGC | 8 cut(s) | 62, 110, 380, 550, 553, 556, 938, 1143 |
| BmcAI | AGTACT | 1 cut(s) | 478 |
| Bme1390I | CCNGG | 3 cut(s) | 366, 812, 1152 |
| Bme18I | GGWCC | 1 cut(s) | 193 |
| BmgT120I | GGNCC | 1 cut(s) | 193 |
| BmiI | GGNNCC | 3 cut(s) | 177, 272, 899 |
| BmrFI | CCNGG | 3 cut(s) | 366, 812, 1152 |
| BmsI | GCATC | 2 cut(s) | 426, 955 |
| BpuEI | CTTGAG | 2 cut(s) | 671, 1089 |
| BpuMI | CCSGG | 1 cut(s) | 366 |
| BsaI | GGTCTC | 1 cut(s) | 647 |
| BsaJI | CCNNGG | 1 cut(s) | 364 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 263, 293 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 172, 219 |
| Bse1I | ACTGG | 2 cut(s) | 520, 667 |
| Bse3DI | GCAATG | 1 cut(s) | 445 |
| BseBI | CCWGG | 2 cut(s) | 812, 1152 |
| BseDI | CCNNGG | 1 cut(s) | 364 |
| BseGI | GGATG | 3 cut(s) | 457, 912, 1130 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 172, 219 |
| BseMI | GCAATG | 1 cut(s) | 445 |
| BseMII | CTCAG | 1 cut(s) | 699 |
| BseNI | ACTGG | 2 cut(s) | 520, 667 |
| BseRI | GAGGAG | 2 cut(s) | 271, 864 |
| BseXI | GCAGC | 7 cut(s) | 72, 120, 365, 535, 538, 541, 1128 |
| BseYI | CCCAGC | 1 cut(s) | 544 |
| Bsh1236I | CGCG | 1 cut(s) | 376 |
| BshFI | GGCC | 3 cut(s) | 444, 810, 939 |
| BshNI | GGYRCC | 2 cut(s) | 175, 897 |
| BsiHKAI | GWGCWC | 1 cut(s) | 604 |
| BsiSI | CCGG | 1 cut(s) | 366 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 172, 219 |
| BsmAI | GTCTC | 4 cut(s) | 292, 647, 704, 1250 |
| BsmBI | CGTCTC | 1 cut(s) | 292 |
| BsmI | GAATGC | 1 cut(s) | 1144 |
| BsnI | GGCC | 3 cut(s) | 444, 810, 939 |
| Bso31I | GGTCTC | 1 cut(s) | 647 |
| Bsp1286I | GDGCHC | 1 cut(s) | 604 |
| Bsp143I | GATC | 6 cut(s) | 308, 343, 368, 754, 1039, 1213 |
| BspACI | CCGC | 7 cut(s) | 63, 172, 196, 256, 291, 936, 1056 |
| BspANI | GGCC | 3 cut(s) | 444, 810, 939 |
| BspCNI | CTCAG | 1 cut(s) | 700 |
| BspFNI | CGCG | 1 cut(s) | 376 |
| BspHI | TCATGA | 2 cut(s) | 340, 346 |
| BspLI | GGNNCC | 3 cut(s) | 177, 272, 899 |
| BspPI | GGATC | 2 cut(s) | 303, 376 |
| BspQI | GCTCTTC | 1 cut(s) | 840 |
| BspT107I | GGYRCC | 2 cut(s) | 175, 897 |
| BspTI | CTTAAG | 1 cut(s) | 1175 |
| BspTNI | GGTCTC | 1 cut(s) | 647 |
| BsrDI | GCAATG | 1 cut(s) | 445 |
| BsrI | ACTGG | 2 cut(s) | 520, 667 |
| BssECI | CCNNGG | 1 cut(s) | 364 |
| BssMI | GATC | 6 cut(s) | 308, 343, 368, 754, 1039, 1213 |
| Bst2UI | CCWGG | 2 cut(s) | 812, 1152 |
| Bst4CI | ACNGT | 2 cut(s) | 1083, 1159 |
| Bst6I | CTCTTC | 3 cut(s) | 452, 840, 1113 |
| BstAFI | CTTAAG | 1 cut(s) | 1175 |
| BstC8I | GCNNGC | 3 cut(s) | 139, 180, 934 |
| BstDEI | CTNAG | 1 cut(s) | 708 |
| BstF5I | GGATG | 3 cut(s) | 457, 912, 1130 |
| BstFNI | CGCG | 1 cut(s) | 376 |
| BstHHI | GCGC | 3 cut(s) | 38, 378, 794 |
| BstKTI | GATC | 6 cut(s) | 311, 346, 371, 757, 1042, 1216 |
| BstMAI | GTCTC | 4 cut(s) | 292, 647, 704, 1250 |
| BstMBI | GATC | 6 cut(s) | 308, 343, 368, 754, 1039, 1213 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 105, 554 |
| BstNI | CCWGG | 2 cut(s) | 812, 1152 |
| BstSCI | CCNGG | 3 cut(s) | 364, 810, 1150 |
| BstSFI | CTRYAG | 1 cut(s) | 82 |
| BstUI | CGCG | 1 cut(s) | 376 |
| BstV1I | GCAGC | 7 cut(s) | 72, 120, 365, 535, 538, 541, 1128 |
| BstX2I | RGATCY | 1 cut(s) | 308 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 593 |
| BstYI | RGATCY | 1 cut(s) | 308 |
| BsuRI | GGCC | 3 cut(s) | 444, 810, 939 |
| BtgZI | GCGATG | 1 cut(s) | 357 |
| BtsCI | GGATG | 3 cut(s) | 457, 912, 1130 |
| BtsI | GCAGTG | 1 cut(s) | 118 |
| BtsIMutI | CAGTG | 1 cut(s) | 118 |
| Cac8I | GCNNGC | 3 cut(s) | 139, 180, 934 |
| CaiI | CAGNNNCTG | 1 cut(s) | 551 |
| CciI | TCATGA | 2 cut(s) | 340, 346 |
| CfoI | GCGC | 3 cut(s) | 38, 378, 794 |
| Cfr13I | GGNCC | 1 cut(s) | 193 |
| Csp6I | GTAC | 5 cut(s) | 87, 477, 898, 1030, 1155 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 248, 283 |
| CviAII | CATG | 4 cut(s) | 341, 347, 1034, 1065 |
| CviQI | GTAC | 5 cut(s) | 87, 477, 898, 1030, 1155 |
| DdeI | CTNAG | 1 cut(s) | 708 |
| DpnI | GATC | 6 cut(s) | 310, 345, 370, 756, 1041, 1215 |
| DpnII | GATC | 6 cut(s) | 308, 343, 368, 754, 1039, 1213 |
| EaeI | YGGCCR | 1 cut(s) | 937 |
| Eam1104I | CTCTTC | 3 cut(s) | 452, 840, 1113 |
| EarI | CTCTTC | 3 cut(s) | 452, 840, 1113 |
| Eco147I | AGGCCT | 1 cut(s) | 810 |
| Eco31I | GGTCTC | 1 cut(s) | 647 |
| Eco47I | GGWCC | 1 cut(s) | 193 |
| EcoRII | CCWGG | 2 cut(s) | 810, 1150 |
| Esp3I | CGTCTC | 1 cut(s) | 292 |
| FaeI | CATG | 4 cut(s) | 344, 350, 1037, 1068 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 138, 170 |
| FatI | CATG | 4 cut(s) | 340, 346, 1033, 1064 |
| FauI | CCCGC | 2 cut(s) | 56, 165 |
| FbaI | TGATCA | 2 cut(s) | 343, 1213 |
| Fnu4HI | GCNGC | 8 cut(s) | 61, 109, 379, 549, 552, 555, 937, 1142 |
| FokI | GGATG | 3 cut(s) | 444, 919, 1117 |
| Fsp4HI | GCNGC | 8 cut(s) | 61, 109, 379, 549, 552, 555, 937, 1142 |
| FspBI | CTAG | 3 cut(s) | 480, 1043, 1226 |
| FspI | TGCGCA | 1 cut(s) | 37 |
| GlaI | GCGC | 3 cut(s) | 37, 377, 793 |
| GluI | GCNGC | 8 cut(s) | 61, 109, 379, 549, 552, 555, 937, 1142 |
| GsaI | CCCAGC | 1 cut(s) | 548 |
| HaeIII | GGCC | 3 cut(s) | 444, 810, 939 |
| HapII | CCGG | 1 cut(s) | 366 |
| HhaI | GCGC | 3 cut(s) | 38, 378, 794 |
| Hin1II | CATG | 4 cut(s) | 344, 350, 1037, 1068 |
| Hin6I | GCGC | 3 cut(s) | 36, 376, 792 |
| HinP1I | GCGC | 3 cut(s) | 36, 376, 792 |
| HincII | GTYRAC | 2 cut(s) | 572, 1206 |
| HindII | GTYRAC | 2 cut(s) | 572, 1206 |
| HinfI | GANTC | 2 cut(s) | 712, 926 |
| HpaI | GTTAAC | 1 cut(s) | 1206 |
| HpaII | CCGG | 1 cut(s) | 366 |
| HphI | GGTGA | 3 cut(s) | 245, 314, 618 |
| Hpy166II | GTNNAC | 3 cut(s) | 572, 1079, 1206 |
| Hpy188I | TCNGA | 3 cut(s) | 238, 709, 857 |
| Hpy188III | TCNNGA | 7 cut(s) | 14, 341, 347, 421, 526, 1043, 1106 |
| Hpy8I | GTNNAC | 3 cut(s) | 572, 1079, 1206 |
| HpyAV | CCTTC | 2 cut(s) | 43, 627 |
| HpyCH4III | ACNGT | 2 cut(s) | 1083, 1159 |
| HpyCH4V | TGCA | 6 cut(s) | 381, 417, 438, 946, 1053, 1144 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 105, 554 |
| HpyF3I | CTNAG | 1 cut(s) | 708 |
| Hsp92II | CATG | 4 cut(s) | 344, 350, 1037, 1068 |
| HspAI | GCGC | 3 cut(s) | 36, 376, 792 |
| KpnI | GGTACC | 1 cut(s) | 901 |
| Ksp22I | TGATCA | 2 cut(s) | 343, 1213 |
| KspAI | GTTAAC | 1 cut(s) | 1206 |
| Kzo9I | GATC | 6 cut(s) | 308, 343, 368, 754, 1039, 1213 |
| LguI | GCTCTTC | 1 cut(s) | 840 |
| Lsp1109I | GCAGC | 7 cut(s) | 72, 120, 365, 535, 538, 541, 1128 |
| LweI | GCATC | 2 cut(s) | 426, 955 |
| MaeI | CTAG | 3 cut(s) | 480, 1043, 1226 |
| MaeIII | GTNAC | 4 cut(s) | 52, 251, 302, 881 |
| MalI | GATC | 6 cut(s) | 310, 345, 370, 756, 1041, 1215 |
| MboI | GATC | 6 cut(s) | 308, 343, 368, 754, 1039, 1213 |
| MboII | GAAGA | 5 cut(s) | 158, 439, 857, 901, 1130 |
| MflI | RGATCY | 1 cut(s) | 308 |
| MhlI | GDGCHC | 1 cut(s) | 604 |
| MluCI | AATT | 8 cut(s) | 129, 245, 391, 537, 733, 795, 980, 1240 |
| MlyI | GAGTC | 2 cut(s) | 706, 935 |
| MmeI | TCCRAC | 3 cut(s) | 701, 835, 1210 |
| MseI | TTAA | 4 cut(s) | 390, 921, 1176, 1205 |
| MslI | CAYNNNNRTG | 1 cut(s) | 345 |
| MspA1I | CMGCKG | 2 cut(s) | 63, 548 |
| MspCI | CTTAAG | 1 cut(s) | 1175 |
| MspI | CCGG | 1 cut(s) | 366 |
| MspR9I | CCNGG | 3 cut(s) | 366, 812, 1152 |
| Mva1269I | GAATGC | 1 cut(s) | 1144 |
| MvaI | CCWGG | 2 cut(s) | 812, 1152 |
| MvnI | CGCG | 1 cut(s) | 376 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 105, 554 |
| NciI | CCSGG | 1 cut(s) | 366 |
| NdeII | GATC | 6 cut(s) | 308, 343, 368, 754, 1039, 1213 |
| NlaIII | CATG | 4 cut(s) | 344, 350, 1037, 1068 |
| NlaIV | GGNNCC | 3 cut(s) | 177, 272, 899 |
| NmuCI | GTSAC | 2 cut(s) | 251, 302 |
| NsbI | TGCGCA | 1 cut(s) | 37 |
| PagI | TCATGA | 2 cut(s) | 340, 346 |
| PceI | AGGCCT | 1 cut(s) | 810 |
| PciSI | GCTCTTC | 1 cut(s) | 840 |
| PctI | GAATGC | 1 cut(s) | 1144 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 219 |
| PkrI | GCNGC | 8 cut(s) | 62, 110, 380, 550, 553, 556, 938, 1143 |
| PleI | GAGTC | 2 cut(s) | 706, 934 |
| PpsI | GAGTC | 2 cut(s) | 706, 934 |
| PsiI | TTATAA | 3 cut(s) | 636, 746, 1170 |
| Psp6I | CCWGG | 2 cut(s) | 810, 1150 |
| PspFI | CCCAGC | 1 cut(s) | 544 |
| PspGI | CCWGG | 2 cut(s) | 810, 1150 |
| PspN4I | GGNNCC | 3 cut(s) | 177, 272, 899 |
| PspPI | GGNCC | 1 cut(s) | 193 |
| PstNI | CAGNNNCTG | 1 cut(s) | 551 |
| PsuI | RGATCY | 1 cut(s) | 308 |
| PvuII | CAGCTG | 1 cut(s) | 548 |
| RsaI | GTAC | 5 cut(s) | 88, 478, 899, 1031, 1156 |
| RsaNI | GTAC | 5 cut(s) | 87, 477, 898, 1030, 1155 |
| RseI | CAYNNNNRTG | 1 cut(s) | 345 |
| SapI | GCTCTTC | 1 cut(s) | 840 |
| SaqAI | TTAA | 4 cut(s) | 390, 921, 1176, 1205 |
| SatI | GCNGC | 8 cut(s) | 61, 109, 379, 549, 552, 555, 937, 1142 |
| Sau3AI | GATC | 6 cut(s) | 308, 343, 368, 754, 1039, 1213 |
| Sau96I | GGNCC | 1 cut(s) | 193 |
| ScaI | AGTACT | 1 cut(s) | 478 |
| SchI | GAGTC | 2 cut(s) | 706, 935 |
| ScrFI | CCNGG | 3 cut(s) | 366, 812, 1152 |
| SduI | GDGCHC | 1 cut(s) | 604 |
| SetI | ASST | 8 cut(s) | 54, 75, 184, 550, 631, 642, 852, 1190 |
| SfaNI | GCATC | 2 cut(s) | 426, 955 |
| SfcI | CTRYAG | 1 cut(s) | 82 |
| SinI | GGWCC | 1 cut(s) | 193 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 345 |
| SmlI | CTYRAG | 3 cut(s) | 650, 1104, 1175 |
| SmoI | CTYRAG | 3 cut(s) | 650, 1104, 1175 |
| SpeI | ACTAGT | 2 cut(s) | 479, 1225 |
| Sse9I | AATT | 8 cut(s) | 129, 245, 391, 537, 733, 795, 980, 1240 |
| SseBI | AGGCCT | 1 cut(s) | 810 |
| SsiI | CCGC | 7 cut(s) | 63, 172, 196, 256, 291, 936, 1056 |
| SspI | AATATT | 1 cut(s) | 674 |
| SspMI | CTAG | 3 cut(s) | 480, 1043, 1226 |
| StuI | AGGCCT | 1 cut(s) | 810 |
| StyD4I | CCNGG | 3 cut(s) | 364, 810, 1150 |
| TaaI | ACNGT | 2 cut(s) | 1083, 1159 |
| TaqI | TCGA | 3 cut(s) | 184, 420, 715 |
| TasI | AATT | 8 cut(s) | 129, 245, 391, 537, 733, 795, 980, 1240 |
| TatI | WGTACW | 2 cut(s) | 86, 476 |
| TauI | GCSGC | 1 cut(s) | 939 |
| Tru1I | TTAA | 4 cut(s) | 390, 921, 1176, 1205 |
| Tru9I | TTAA | 4 cut(s) | 390, 921, 1176, 1205 |
| TscAI | CASTG | 1 cut(s) | 118 |
| TseFI | GTSAC | 2 cut(s) | 251, 302 |
| TseI | GCWGC | 7 cut(s) | 60, 108, 378, 548, 551, 554, 1141 |
| Tsp45I | GTSAC | 2 cut(s) | 251, 302 |
| TspDTI | ATGAA | 5 cut(s) | 783, 788, 858, 1119, 1131 |
| TspGWI | ACGGA | 2 cut(s) | 158, 274 |
| TspRI | CASTG | 1 cut(s) | 118 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 219 |
| Vha464I | CTTAAG | 1 cut(s) | 1175 |
| VpaK11BI | GGWCC | 1 cut(s) | 193 |
| XapI | RAATTY | 2 cut(s) | 245, 980 |
| XbaI | TCTAGA | 1 cut(s) | 1042 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 437 |
| XspI | CTAG | 3 cut(s) | 480, 1043, 1226 |
| ZrmI | AGTACT | 1 cut(s) | 478 |