RchiOBHm_Chr4g0398111

F-box protein At5g07610-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000237
Physical Location & Seq
Forward (+)
14497666 .. 14501885
4220 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37030

Sequence Viewer

Length: 1299 bp
ATGGAGACTGCCTGTCCAGAATCACCCAAACATTCCTTACCAGCTGAAACCATAGCCAACCACGACGATCTCCTCTCGCAGATCCTCGTCCGCTTAGAAGCCAAGTCCCTCATCCGCTACAAATCCGTCTCCAAGCACTGGCTCTCTCTCATTTCCAGCCCCAAATTCCGTGAACGCCACACCATCCGAAACCCTAACCCTACCGTCTCCGCCTTCTTCTTCCTCTCCACCAACCAACGCCTCAGCTTCATCTCCCTCTCCGACGACGAAACTCGATGCGGATCCCACTCCAATCCGCTCGATTCGGTCCCGGAGCTGCGAGGAATCAAGATTCTGCAGTCCTGCAATGGCTTGCTCCTCTGCTGTTCCGGCGGAGAAGAAACGACCCGAAGAGCATACTATGTGGTCAATCCCACAGCCAGTCAGTTCTCGAGACTTCCCTCTCCTCCATATGCTTGTCAATTCGATGATAGTTTGGGTATTGCTTTGGCTTTTGATCCTTATAGAACTGGAAATGTTCATTACAAAGTGGTTTCTGTTTGGATGACTAGTCGTAATACTATAGGGATTGGGATATATGCATCAGAGACTCGGAGTTGGAGTCTATGCTTGAGTCAAGTCCACTTCGTGCAGTGCCAATTTGAAGTGGACTTTGGCCGCGGGGTGTACTGCAATGGAGCAATTCATTGGCTAAACCACAAGGATGAGTTGTTCTACTGTCACATTGGTGATGGCTCGGATGAAAAGCCGGTGAGGGGTGGAGTTTTGTCTAGTCCACTTGGTTTAATGTTTGATAGGGAGTATAGGTATTTTGGGGAGTCTTGTGGCCATTTGCACCTAATTGATATTTTCAAGCCTTGCGTTAATCAGTTTGATGTAAGGGAATTGGAGCCGGATTACTCTGGCTGGGTTGTCAAATACCATGTTGATCTTGGTCCGATAATTGAAACTAATAGGTCTTGTATTAATGAGATGCTGATACCCAAGGACTACTCTGGTTGGTTTGTCAAGTGCAAAGCTGATTTGTATTCCAGAAGCTATTCCTTTCAGGAGGTGGTTGGGTACTATTTGGATCGATATTATCAATTTGTTGTTCTATCTCTTACTCGAGAAGACAATGGAGGGGATCTGTGTTTGTTGCTGTATTTTCGTGCTAAGGTCATCTCTTACAATCTTAGGGATAAGACGTTCAAGAAACTATGTGACTTAGCTCCGGAAGGCACCGCTGGGACCCAGAGATCTTTAAAAGTTGAATGGCTGGAGGCTTATAATCATATGGGGAGTTTGGCTTGCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

432

Amino Acids

49.17

Weight (kDa)

6.53

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 22 - 58 3e-06 F-box domain
FBA_1 PF07734 97 - 234 2.7e-10 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 109 - 235 3e-07 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000237)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G14315
fragaria_vesca FvH4_2g35920 FvH4_2g35930 FvH4_2g35940 FvH4_2g35950 FvH4_3g00321 FvH4_3g32490 FvH4_3g43790 FvH4_3g43790 FvH4_3g43790 FvH4_4g06360 FvH4_4g06370 FvH4_4g06370 FvH4_6g52062 FvH4_6g52062 FvH4_6g52080 FvH4_6g52610 FvH4_6g52830 FvH4_6g52861 FvH4_6g52861 FvH4_6g52862 FvH4_6g52871 FvH4_6g52880 FvH4_6g52931 FvH4_6g52941 FvH4_6g52942 FvH4_6g53001 FvH4_6g53021 FvH4_6g53072 FvH4_6g53610 FvH4_6g53620 FvH4_6g53620 FvH4_6g53651 FvH4_6g53660
malus_domestica MD13G1235400.v1.1 MD16G1240000.v1.1
prunus_persica Prupe.1G066400_v2.0.a1
pyrus_communis pycom13g20790 pycom16g20090
rosa_chinensis RchiOBHm_Chr2g0174451 RchiOBHm_Chr2g0174531 RchiOBHm_Chr2g0174701 RchiOBHm_Chr2g0174881 RchiOBHm_Chr2g0174951 RchiOBHm_Chr4g0396041 RchiOBHm_Chr4g0396501 RchiOBHm_Chr4g0398111 RchiOBHm_Chr5g0059531 RchiOBHm_Chr6g0264241
rosa_laevigata RLG00000009385 RLG00000009528 RLG00000009532 RLG00000009537 RLG00000009541 RLG00000009577 RLG00000022267 RLG00000022268 RLG00000022269 RLG00000022273 RLG00000022287 RLG00000022289 RLG00000032767 RLG00000035297
rosa_multiflora Rmu_co8114622.1_g000001 Rmu_co8160300.1_g000001 Rmu_co8411703.1_g000001 Rmu_sc0001217.1_g000015 Rmu_sc0001533.1_g000002 Rmu_sc0003649.1_g000012 Rmu_sc0003649.1_g000015 Rmu_sc0003649.1_g000017 Rmu_sc0003649.1_g000020 Rmu_sc0006325.1_g000006 Rmu_sc0009506.1_g000001 Rmu_sc0009766.1_g000006 Rmu_sc0015078.1_g000002 Rmu_sc0015594.1_g000006 Rmu_sc0015594.1_g000007
rosa_roxburghii Rroxscaffold_1G00021050 Rroxscaffold_2G00077800 Rroxscaffold_2G00077920 Rroxscaffold_2G00078070 Rroxscaffold_2G00078100 Rroxscaffold_2G00078130 Rroxscaffold_2G00078170 Rroxscaffold_3G00220050 Rroxscaffold_5G00340840 Rroxscaffold_5G00340850 Rroxscaffold_5G00341370 Rroxscaffold_5G00343010 Rroxscaffold_5G00381750
rosa_rugosa Rorug02G0577300 Rorug02G0577400 Rorug02G0577700 Rorug02G0577800 Rorug02G0579000 Rorug03G0352900 Rorug03G0352900 Rorug04G0006000 Rorug05G0323000
rosa_samantha Rh2AG658100 Rh2AG658400 Rh2AG658600 Rh2AG660200 Rh2AG663100 Rh2CG632100 Rh2CG632600 Rh2CG632700 Rh2CG634300 Rh2CG635600 Rh2DG682800 Rh2DG683300 Rh2DG686000 Rh3BG068500 Rh3CG066900 Rh4AG064800 Rh4AG065900 Rh4AG068900 Rh4AG083000 Rh4BG063600 Rh4BG063700 Rh4BG067000 Rh4BG080700 Rh4DG060400 Rh4DG060500 Rh4DG075600 Rh5CG423600
rosa_wichuraiana Rw2G053920 Rw2G053940 Rw2G053950 Rw2G054080 Rw2G054210 Rw4G000460 Rw4G005260 Rw4G005270 Rw4G005550 Rw4G006900 Rw5G036490 Rw5G036550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1269
AccB1I GGYRCC 1 cut(s) 1220
AccB7I CCANNNNNTGG 1 cut(s) 138
AccBSI CCGCTC 1 cut(s) 298
AccII CGCG 1 cut(s) 660
AccIII TCCGGA 1 cut(s) 1213
AciI CCGC 9 cut(s) 91, 115, 210, 279, 296, 372, 658, 660, 1224
AclWI GGATC 6 cut(s) 76, 276, 289, 491, 1080, 1134
AcoI YGGCCR 2 cut(s) 655, 826
AcsI RAATTY 1 cut(s) 164
AdeI CACNNNGTG 1 cut(s) 628
AfaI GTAC 2 cut(s) 668, 1064
AfiI CCNNNNNNNGG 2 cut(s) 138, 755
AgsI TTSAA 5 cut(s) 644, 853, 947, 1192, 1253
AhdI GACNNNNNGTC 1 cut(s) 12
AhlI ACTAGT 1 cut(s) 548
AjuI GAANNNNNNNTTGG 2 cut(s) 636, 668
AleI CACNNNNGTG 1 cut(s) 726
AloI GAACNNNNNNTCC 4 cut(s) 695, 727, 1172, 1204
AluBI AGCT 6 cut(s) 44, 246, 316, 1019, 1038, 1211
AluI AGCT 6 cut(s) 44, 246, 316, 1019, 1038, 1211
Alw26I GTCTC 4 cut(s) 133, 211, 427, 581
AlwI GGATC 6 cut(s) 76, 276, 289, 491, 1080, 1134
Ama87I CYCGRG 2 cut(s) 430, 1107
Aor13HI TCCGGA 1 cut(s) 1213
AoxI GGCC 2 cut(s) 655, 826
ApeKI GCWGC 1 cut(s) 316
ApoI RAATTY 1 cut(s) 164
AseI ATTAAT 1 cut(s) 966
Asp700I GAANNNNTTC 1 cut(s) 1039
AspS9I GGNCC 3 cut(s) 307, 935, 1230
AsuC2I CCSGG 1 cut(s) 311
AsuHPI GGTGA 3 cut(s) 15, 740, 763
AvaI CYCGRG 2 cut(s) 430, 1107
AvaII GGWCC 3 cut(s) 307, 935, 1230
BalI TGGCCA 1 cut(s) 828
BamHI GGATCC 1 cut(s) 281
BanI GGYRCC 1 cut(s) 1220
BbsI GAAGAC 1 cut(s) 1119
BbvCI CCTCAGC 1 cut(s) 242
BbvI GCAGC 1 cut(s) 303
BccI CCATC 2 cut(s) 191, 725
BcnI CCSGG 1 cut(s) 311
BcoDI GTCTC 4 cut(s) 133, 211, 427, 581
BcuI ACTAGT 1 cut(s) 548
BfaI CTAG 2 cut(s) 549, 771
BfmI CTRYAG 2 cut(s) 335, 561
BglII AGATCT 1 cut(s) 1238
BisI GCNGC 2 cut(s) 317, 658
BlsI GCNGC 2 cut(s) 318, 659
Bme1390I CCNGG 1 cut(s) 311
Bme18I GGWCC 3 cut(s) 307, 935, 1230
BmeRI GACNNNNNGTC 1 cut(s) 12
BmeT110I CYCGRG 2 cut(s) 430, 1107
BmgT120I GGNCC 3 cut(s) 307, 935, 1230
BmiI GGNNCC 6 cut(s) 283, 309, 891, 1222, 1231, 1232
BmrFI CCNGG 1 cut(s) 311
BmsI GCATC 3 cut(s) 266, 590, 963
BpiI GAAGAC 1 cut(s) 1119
BpmI CTGGAG 1 cut(s) 1280
Bpu10I CCTNAGC 2 cut(s) 242, 1155
BpuEI CTTGAG 1 cut(s) 631
BpuMI CCSGG 1 cut(s) 311
Bsa29I ATCGAT 1 cut(s) 1075
BsaBI GATNNNNATC 1 cut(s) 280
BsaJI CCNNGG 2 cut(s) 658, 984
BsaWI WCCGGW 1 cut(s) 1213
BsaXI ACNNNNNCTCC 4 cut(s) 586, 616, 791, 821
Bsc4I CCNNNNNNNGG 2 cut(s) 138, 755
Bse118I RCCGGY 1 cut(s) 748
Bse1I ACTGG 3 cut(s) 143, 420, 514
Bse3DI GCAATG 2 cut(s) 352, 679
Bse8I GATNNNNATC 1 cut(s) 280
BseAI TCCGGA 1 cut(s) 1213
BseCI ATCGAT 1 cut(s) 1075
BseDI CCNNGG 2 cut(s) 658, 984
BseGI GGATG 5 cut(s) 111, 183, 549, 709, 745
BseJI GATNNNNATC 1 cut(s) 280
BseLI CCNNNNNNNGG 2 cut(s) 138, 755
BseMI GCAATG 2 cut(s) 352, 679
BseMII CTCAG 1 cut(s) 256
BseNI ACTGG 3 cut(s) 143, 420, 514
BseRI GAGGAG 3 cut(s) 62, 347, 435
BseXI GCAGC 1 cut(s) 303
BseYI CCCAGC 2 cut(s) 906, 1226
BsgI GTGCAG 1 cut(s) 650
Bsh1236I CGCG 1 cut(s) 660
BshFI GGCC 2 cut(s) 657, 828
BshNI GGYRCC 1 cut(s) 1220
BshVI ATCGAT 1 cut(s) 1075
BsiHKCI CYCGRG 2 cut(s) 430, 1107
BsiSI CCGG 5 cut(s) 311, 369, 749, 893, 1214
BslFI GGGAC 3 cut(s) 91, 293, 1243
BslI CCNNNNNNNGG 2 cut(s) 138, 755
BsmAI GTCTC 4 cut(s) 133, 211, 427, 581
BsmBI CGTCTC 2 cut(s) 133, 211
BsmFI GGGAC 3 cut(s) 91, 293, 1243
BsnI GGCC 2 cut(s) 657, 828
BsoBI CYCGRG 2 cut(s) 430, 1107
Bsp13I TCCGGA 1 cut(s) 1213
Bsp143I GATC 8 cut(s) 67, 81, 281, 496, 928, 1072, 1126, 1238
BspACI CCGC 9 cut(s) 91, 115, 210, 279, 296, 372, 658, 660, 1224
BspANI GGCC 2 cut(s) 657, 828
BspCNI CTCAG 1 cut(s) 255
BspDI ATCGAT 1 cut(s) 1075
BspEI TCCGGA 1 cut(s) 1213
BspFNI CGCG 1 cut(s) 660
BspLI GGNNCC 6 cut(s) 283, 309, 891, 1222, 1231, 1232
BspMAI CTGCAG 1 cut(s) 339
BspPI GGATC 6 cut(s) 76, 276, 289, 491, 1080, 1134
BspQI GCTCTTC 1 cut(s) 385
BspT107I GGYRCC 1 cut(s) 1220
BsrBI CCGCTC 1 cut(s) 298
BsrDI GCAATG 2 cut(s) 352, 679
BsrFI RCCGGY 1 cut(s) 748
BsrI ACTGG 3 cut(s) 143, 420, 514
BssAI RCCGGY 1 cut(s) 748
BssECI CCNNGG 2 cut(s) 658, 984
BssMI GATC 8 cut(s) 67, 81, 281, 496, 928, 1072, 1126, 1238
BssT1I CCWWGG 1 cut(s) 984
Bst4CI ACNGT 2 cut(s) 205, 719
Bst6I CTCTTC 1 cut(s) 385
BstC8I GCNNGC 2 cut(s) 353, 1291
BstDEI CTNAG 5 cut(s) 94, 242, 1155, 1175, 1207
BstDSI CCRYGG 1 cut(s) 658
BstF5I GGATG 5 cut(s) 111, 183, 549, 709, 745
BstFNI CGCG 1 cut(s) 660
BstKTI GATC 8 cut(s) 70, 84, 284, 499, 931, 1075, 1129, 1241
BstMAI GTCTC 4 cut(s) 133, 211, 427, 581
BstMBI GATC 8 cut(s) 67, 81, 281, 496, 928, 1072, 1126, 1238
BstMWI GCNNNNNNNGC 1 cut(s) 369
BstSCI CCNGG 1 cut(s) 309
BstSFI CTRYAG 2 cut(s) 335, 561
BstUI CGCG 1 cut(s) 660
BstV1I GCAGC 1 cut(s) 303
BstV2I GAAGAC 1 cut(s) 1119
BstX2I RGATCY 4 cut(s) 81, 281, 1126, 1238
BstYI RGATCY 4 cut(s) 81, 281, 1126, 1238
Bsu15I ATCGAT 1 cut(s) 1075
BsuRI GGCC 2 cut(s) 657, 828
BsuTUI ATCGAT 1 cut(s) 1075
BtgI CCRYGG 1 cut(s) 658
BtsCI GGATG 5 cut(s) 111, 183, 549, 709, 745
BtsI GCAGTG 1 cut(s) 638
BtsIMutI CAGTG 2 cut(s) 136, 638
Cac8I GCNNGC 2 cut(s) 353, 1291
Cfr10I RCCGGY 1 cut(s) 748
Cfr13I GGNCC 3 cut(s) 307, 935, 1230
Cfr42I CCGCGG 1 cut(s) 661
ClaI ATCGAT 1 cut(s) 1075
Csp6I GTAC 2 cut(s) 667, 1063
CviAII CATG 1 cut(s) 923
CviQI GTAC 2 cut(s) 667, 1063
DdeI CTNAG 5 cut(s) 94, 242, 1155, 1175, 1207
DpnI GATC 8 cut(s) 69, 83, 283, 498, 930, 1074, 1128, 1240
DpnII GATC 8 cut(s) 67, 81, 281, 496, 928, 1072, 1126, 1238
DraI TTTAAA 1 cut(s) 1245
DraIII CACNNNGTG 1 cut(s) 628
DriI GACNNNNNGTC 1 cut(s) 12
EaeI YGGCCR 2 cut(s) 655, 826
Eam1104I CTCTTC 1 cut(s) 385
Eam1105I GACNNNNNGTC 1 cut(s) 12
EarI CTCTTC 1 cut(s) 385
EciI GGCGGA 2 cut(s) 199, 387
Eco130I CCWWGG 1 cut(s) 984
Eco47I GGWCC 3 cut(s) 307, 935, 1230
Eco88I CYCGRG 2 cut(s) 430, 1107
EcoO109I RGGNCCY 1 cut(s) 1230
EcoT14I CCWWGG 1 cut(s) 984
EcoT22I ATGCAT 1 cut(s) 583
ErhI CCWWGG 1 cut(s) 984
Esp3I CGTCTC 2 cut(s) 133, 211
FaeI CATG 1 cut(s) 926
FaqI GGGAC 3 cut(s) 91, 293, 1243
FatI CATG 1 cut(s) 922
FauI CCCGC 1 cut(s) 653
FauNDI CATATG 2 cut(s) 451, 1275
Fnu4HI GCNGC 2 cut(s) 317, 658
FokI GGATG 5 cut(s) 98, 170, 556, 716, 752
Fsp4HI GCNGC 2 cut(s) 317, 658
FspBI CTAG 2 cut(s) 549, 771
GluI GCNGC 2 cut(s) 317, 658
GsaI CCCAGC 2 cut(s) 910, 1230
GsuI CTGGAG 1 cut(s) 1280
HaeIII GGCC 2 cut(s) 657, 828
HapII CCGG 5 cut(s) 311, 369, 749, 893, 1214
Hin1II CATG 1 cut(s) 926
HinfI GANTC 8 cut(s) 20, 302, 324, 331, 589, 601, 613, 818
HpaII CCGG 5 cut(s) 311, 369, 749, 893, 1214
HphI GGTGA 3 cut(s) 15, 740, 763
Hpy166II GTNNAC 5 cut(s) 173, 622, 649, 667, 776
Hpy188I TCNGA 6 cut(s) 188, 262, 586, 594, 739, 939
Hpy188III TCNNGA 9 cut(s) 17, 328, 430, 432, 1032, 1049, 1109, 1192, 1214
Hpy8I GTNNAC 5 cut(s) 173, 622, 649, 667, 776
Hpy99I CGWCG 3 cut(s) 68, 266, 269
HpyAV CCTTC 2 cut(s) 223, 1211
HpyCH4III ACNGT 2 cut(s) 205, 719
HpyCH4IV ACGT 1 cut(s) 1187
HpyCH4V TGCA 7 cut(s) 337, 345, 581, 631, 672, 835, 1014
HpyF10VI GCNNNNNNNGC 1 cut(s) 369
HpyF3I CTNAG 5 cut(s) 94, 242, 1155, 1175, 1207
HpySE526I ACGT 1 cut(s) 1187
Hsp92II CATG 1 cut(s) 926
KflI GGGWCCC 1 cut(s) 1230
Kpn2I TCCGGA 1 cut(s) 1213
KspI CCGCGG 1 cut(s) 661
Kzo9I GATC 8 cut(s) 67, 81, 281, 496, 928, 1072, 1126, 1238
LguI GCTCTTC 1 cut(s) 385
LmnI GCTCC 5 cut(s) 313, 360, 677, 889, 1216
Lsp1109I GCAGC 1 cut(s) 303
LweI GCATC 3 cut(s) 266, 590, 963
MaeI CTAG 2 cut(s) 549, 771
MaeII ACGT 1 cut(s) 1187
MaeIII GTNAC 2 cut(s) 719, 1202
MalI GATC 8 cut(s) 69, 83, 283, 498, 930, 1074, 1128, 1240
MbiI CCGCTC 1 cut(s) 298
MboI GATC 8 cut(s) 67, 81, 281, 496, 928, 1072, 1126, 1238
MboII GAAGA 5 cut(s) 208, 211, 389, 402, 1124
MflI RGATCY 4 cut(s) 81, 281, 1126, 1238
MlsI TGGCCA 1 cut(s) 828
MluCI AATT 8 cut(s) 164, 461, 638, 681, 840, 884, 942, 1085
MluNI TGGCCA 1 cut(s) 828
MlyI GAGTC 4 cut(s) 583, 610, 622, 827
MmeI TCCRAC 2 cut(s) 285, 578
Mox20I TGGCCA 1 cut(s) 828
Mph1103I ATGCAT 1 cut(s) 583
MroI TCCGGA 1 cut(s) 1213
MroXI GAANNNNTTC 1 cut(s) 1039
MscI TGGCCA 1 cut(s) 828
MseI TTAA 4 cut(s) 785, 864, 966, 1244
MslI CAYNNNNRTG 2 cut(s) 702, 726
Msp20I TGGCCA 1 cut(s) 828
MspA1I CMGCKG 3 cut(s) 44, 660, 1226
MspI CCGG 5 cut(s) 311, 369, 749, 893, 1214
MspR9I CCNGG 1 cut(s) 311
MvnI CGCG 1 cut(s) 660
MwoI GCNNNNNNNGC 1 cut(s) 369
NciI CCSGG 1 cut(s) 311
NdeI CATATG 2 cut(s) 451, 1275
NdeII GATC 8 cut(s) 67, 81, 281, 496, 928, 1072, 1126, 1238
NlaIII CATG 1 cut(s) 926
NlaIV GGNNCC 6 cut(s) 283, 309, 891, 1222, 1231, 1232
NmuCI GTSAC 2 cut(s) 719, 1202
NsiI ATGCAT 1 cut(s) 583
OliI CACNNNNGTG 1 cut(s) 726
PaeR7I CTCGAG 2 cut(s) 430, 1107
PciSI GCTCTTC 1 cut(s) 385
PdmI GAANNNNTTC 1 cut(s) 1039
PfeI GAWTC 4 cut(s) 20, 302, 324, 331
PflMI CCANNNNNTGG 1 cut(s) 138
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 2 cut(s) 318, 659
PleI GAGTC 4 cut(s) 583, 609, 621, 826
PpsI GAGTC 4 cut(s) 583, 609, 621, 826
PpuMI RGGWCCY 1 cut(s) 1230
PshBI ATTAAT 1 cut(s) 966
PsiI TTATAA 1 cut(s) 1269
Psp5II RGGWCCY 1 cut(s) 1230
PspFI CCCAGC 2 cut(s) 906, 1226
PspN4I GGNNCC 6 cut(s) 283, 309, 891, 1222, 1231, 1232
PspPI GGNCC 3 cut(s) 307, 935, 1230
PspPPI RGGWCCY 1 cut(s) 1230
PstI CTGCAG 1 cut(s) 339
PsuI RGATCY 4 cut(s) 81, 281, 1126, 1238
PvuII CAGCTG 1 cut(s) 44
RsaI GTAC 2 cut(s) 668, 1064
RsaNI GTAC 2 cut(s) 667, 1063
RseI CAYNNNNRTG 2 cut(s) 702, 726
SacII CCGCGG 1 cut(s) 661
SapI GCTCTTC 1 cut(s) 385
SaqAI TTAA 4 cut(s) 785, 864, 966, 1244
SatI GCNGC 2 cut(s) 317, 658
Sau3AI GATC 8 cut(s) 67, 81, 281, 496, 928, 1072, 1126, 1238
Sau96I GGNCC 3 cut(s) 307, 935, 1230
SchI GAGTC 4 cut(s) 583, 610, 622, 827
ScrFI CCNGG 1 cut(s) 311
SfaNI GCATC 3 cut(s) 266, 590, 963
SfcI CTRYAG 2 cut(s) 335, 561
Sfr274I CTCGAG 2 cut(s) 430, 1107
Sfr303I CCGCGG 1 cut(s) 661
SgrBI CCGCGG 1 cut(s) 661
SinI GGWCC 3 cut(s) 307, 935, 1230
SlaI CTCGAG 2 cut(s) 430, 1107
SmiMI CAYNNNNRTG 2 cut(s) 702, 726
SmlI CTYRAG 3 cut(s) 430, 610, 1107
SmoI CTYRAG 3 cut(s) 430, 610, 1107
SpeI ACTAGT 1 cut(s) 548
Sse9I AATT 8 cut(s) 164, 461, 638, 681, 840, 884, 942, 1085
SsiI CCGC 9 cut(s) 91, 115, 210, 279, 296, 372, 658, 660, 1224
SspMI CTAG 2 cut(s) 549, 771
StyD4I CCNGG 1 cut(s) 309
StyI CCWWGG 1 cut(s) 984
TaaI ACNGT 2 cut(s) 205, 719
TaiI ACGT 1 cut(s) 1190
TaqI TCGA 6 cut(s) 274, 300, 431, 465, 1075, 1108
TaqII GACCGA 1 cut(s) 295
TasI AATT 8 cut(s) 164, 461, 638, 681, 840, 884, 942, 1085
TatI WGTACW 1 cut(s) 666
TauI GCSGC 1 cut(s) 660
TfiI GAWTC 4 cut(s) 20, 302, 324, 331
Tru1I TTAA 4 cut(s) 785, 864, 966, 1244
Tru9I TTAA 4 cut(s) 785, 864, 966, 1244
TscAI CASTG 2 cut(s) 143, 638
TseFI GTSAC 2 cut(s) 719, 1202
TseI GCWGC 1 cut(s) 316
Tsp45I GTSAC 2 cut(s) 719, 1202
TspDTI ATGAA 4 cut(s) 238, 509, 674, 756
TspGWI ACGGA 2 cut(s) 115, 158
TspRI CASTG 2 cut(s) 143, 638
Van91I CCANNNNNTGG 1 cut(s) 138
VpaK11BI GGWCC 3 cut(s) 307, 935, 1230
VspI ATTAAT 1 cut(s) 966
XapI RAATTY 1 cut(s) 164
XcmI CCANNNNNNNNNTGG 1 cut(s) 929
XhoI CTCGAG 2 cut(s) 430, 1107
XmnI GAANNNNTTC 1 cut(s) 1039
XspI CTAG 2 cut(s) 549, 771
Zsp2I ATGCAT 1 cut(s) 583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.