Rroxscaffold_2G00077920

F-box protein At5g07610-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000237
Physical Location & Seq
Reverse (-)
1374928 .. 1376019
1092 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00077920.1

Sequence Viewer

Length: 1092 bp
ATGCGTCTCCAGCATTGGCTCTCTCTTATCTCCGACCCTAACTTCTGTCATTGCCACACCCTAAGGAACCCCCACTCCTCCATCTCCGCTGTCTTTACTAAATCATCCACTGGCTTTTATTTCGTCCCTCTTGATCTTGATCATGATGGCAGTAGTACTAGTAACTACGGAAACCAAAAGCTATCTAGGTCTGCTGGGTCTGGTAAATCCACCTGCGATCCTCTTAACTTCGTTCCACACCTATATGACACCGTGAGTATCCAGTCCTGCAATGGGCTTTTCTTGTGCTGTCCCAATCCTCCAATAATTAACCGTCCATATTATGTTCTCAATCCCACAACCAACCAGTTCTCCACACTTATTTCTCCAGCTGCTGCTGCTGCTACACATCAACGCCGTGTCTTCGGTTACGCTTTGGCTTTTGACCCTTCCAAATCACCTCATTACAAGGTGGTCTTCCTTTGGAGCGTTAATGAACCAGAAGATGACTATTGCCCTTATTATCACATAGAGATATATTCGTCTGAGACTCAAAGTTGGAGACTTCTCGATTCCTCTTTCATTAGGGCAGCTAATGTCAGCTATGATGAAGGGGTATACTGCAATGGCGCAGTTCATTGTGTAGGCATGGATAGTGAGATGTCATACTATCACCTAGATGAAGAGCGTGTTGGATTTGTCAATGGTTCTCCTATGCCTTCAGAGAAGGATTTATTTTGGAGGTATTTTTGGGAGTCTCATGGTAGTGGCCATTTGCATCTTGTTGACATTTATCGGCCTGGTCTTACTGCATTTGAAGTGTTGGAGATGGGGAGAGACTACTCTGGTTGGTTTGTCAAGTACCGTGTTGATCTGGATCCCATATTCACTACTTACCCGCAGCTCCCATGGTACTTTATTGTTGTTCTCTTTATTGCTCGAGAGGAAACTGAAGAAGAGAAGCAATACCTGGTAAATTCATCTCTTATAATCCTAGGAGCAATACCTTCAAATCTTTTGAGTTACCTCCTGAGGCCGGCGGTAATGATCCTTGTAACAGAGTTGGCCACCAAAATTATCGATATATGGAGAGTTTGGCTTGTGTGTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

363

Amino Acids

41.52

Weight (kDa)

5.48

Isoelectric Point (pI)

50.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 81 - 212 3.3e-14 F-box associated beta propeller domain
FBA_3 PF08268 85 - 211 9.3e-06 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000237)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G14315
fragaria_vesca FvH4_2g35920 FvH4_2g35930 FvH4_2g35940 FvH4_2g35950 FvH4_3g00321 FvH4_3g32490 FvH4_3g43790 FvH4_3g43790 FvH4_3g43790 FvH4_4g06360 FvH4_4g06370 FvH4_4g06370 FvH4_6g52062 FvH4_6g52062 FvH4_6g52080 FvH4_6g52610 FvH4_6g52830 FvH4_6g52861 FvH4_6g52861 FvH4_6g52862 FvH4_6g52871 FvH4_6g52880 FvH4_6g52931 FvH4_6g52941 FvH4_6g52942 FvH4_6g53001 FvH4_6g53021 FvH4_6g53072 FvH4_6g53610 FvH4_6g53620 FvH4_6g53620 FvH4_6g53651 FvH4_6g53660
malus_domestica MD13G1235400.v1.1 MD16G1240000.v1.1
prunus_persica Prupe.1G066400_v2.0.a1
pyrus_communis pycom13g20790 pycom16g20090
rosa_chinensis RchiOBHm_Chr2g0174451 RchiOBHm_Chr2g0174531 RchiOBHm_Chr2g0174701 RchiOBHm_Chr2g0174881 RchiOBHm_Chr2g0174951 RchiOBHm_Chr4g0396041 RchiOBHm_Chr4g0396501 RchiOBHm_Chr4g0398111 RchiOBHm_Chr5g0059531 RchiOBHm_Chr6g0264241
rosa_laevigata RLG00000009385 RLG00000009528 RLG00000009532 RLG00000009537 RLG00000009541 RLG00000009577 RLG00000022267 RLG00000022268 RLG00000022269 RLG00000022273 RLG00000022287 RLG00000022289 RLG00000032767 RLG00000035297
rosa_multiflora Rmu_co8114622.1_g000001 Rmu_co8160300.1_g000001 Rmu_co8411703.1_g000001 Rmu_sc0001217.1_g000015 Rmu_sc0001533.1_g000002 Rmu_sc0003649.1_g000012 Rmu_sc0003649.1_g000015 Rmu_sc0003649.1_g000017 Rmu_sc0003649.1_g000020 Rmu_sc0006325.1_g000006 Rmu_sc0009506.1_g000001 Rmu_sc0009766.1_g000006 Rmu_sc0015078.1_g000002 Rmu_sc0015594.1_g000006 Rmu_sc0015594.1_g000007
rosa_roxburghii Rroxscaffold_1G00021050 Rroxscaffold_2G00077800 Rroxscaffold_2G00077920 Rroxscaffold_2G00078070 Rroxscaffold_2G00078100 Rroxscaffold_2G00078130 Rroxscaffold_2G00078170 Rroxscaffold_3G00220050 Rroxscaffold_5G00340840 Rroxscaffold_5G00340850 Rroxscaffold_5G00341370 Rroxscaffold_5G00343010 Rroxscaffold_5G00381750
rosa_rugosa Rorug02G0577300 Rorug02G0577400 Rorug02G0577700 Rorug02G0577800 Rorug02G0579000 Rorug03G0352900 Rorug03G0352900 Rorug04G0006000 Rorug05G0323000
rosa_samantha Rh2AG658100 Rh2AG658400 Rh2AG658600 Rh2AG660200 Rh2AG663100 Rh2CG632100 Rh2CG632600 Rh2CG632700 Rh2CG634300 Rh2CG635600 Rh2DG682800 Rh2DG683300 Rh2DG686000 Rh3BG068500 Rh3CG066900 Rh4AG064800 Rh4AG065900 Rh4AG068900 Rh4AG083000 Rh4BG063600 Rh4BG063700 Rh4BG067000 Rh4BG080700 Rh4DG060400 Rh4DG060500 Rh4DG075600 Rh5CG423600
rosa_wichuraiana Rw2G053920 Rw2G053940 Rw2G053950 Rw2G054080 Rw2G054210 Rw4G000460 Rw4G005260 Rw4G005270 Rw4G005550 Rw4G006900 Rw5G036490 Rw5G036550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 968
AarI CACCTGC 1 cut(s) 221
Acc36I ACCTGC 1 cut(s) 221
AccI GTMKAC 1 cut(s) 597
AciI CCGC 3 cut(s) 87, 878, 1019
AclWI GGATC 4 cut(s) 212, 851, 864, 1021
AcoI YGGCCR 2 cut(s) 748, 1044
AcsI RAATTY 1 cut(s) 955
AcuI CTGAAG 2 cut(s) 684, 951
AfaI GTAC 3 cut(s) 157, 842, 893
AfiI CCNNNNNNNGG 2 cut(s) 273, 1015
AgsI TTSAA 2 cut(s) 797, 990
AhlI ACTAGT 1 cut(s) 158
AjnI CCWGG 2 cut(s) 778, 948
AjuI GAANNNNNNNTTGG 2 cut(s) 654, 686
AloI GAACNNNNNNTCC 2 cut(s) 59, 91
AluBI AGCT 5 cut(s) 181, 371, 572, 582, 883
AluI AGCT 5 cut(s) 181, 371, 572, 582, 883
Alw26I GTCTC 5 cut(s) 11, 521, 535, 741, 810
AlwI GGATC 4 cut(s) 212, 851, 864, 1021
AlwNI CAGNNNCTG 1 cut(s) 374
Ama87I CYCGRG 1 cut(s) 918
AoxI GGCC 4 cut(s) 748, 776, 1013, 1044
ApeKI GCWGC 6 cut(s) 371, 374, 377, 380, 569, 880
ApoI RAATTY 1 cut(s) 955
AspA2I CCTAGG 1 cut(s) 973
AspLEI GCGC 1 cut(s) 611
AsuHPI GGTGA 2 cut(s) 429, 644
AvaI CYCGRG 1 cut(s) 918
AvrII CCTAGG 1 cut(s) 973
AxyI CCTNAGG 2 cut(s) 62, 1010
BalI TGGCCA 2 cut(s) 750, 1046
BamHI GGATCC 1 cut(s) 856
BbsI GAAGAC 2 cut(s) 394, 448
BbvI GCAGC 6 cut(s) 358, 361, 364, 367, 581, 892
BccI CCATC 3 cut(s) 89, 140, 802
BceAI ACGGC 1 cut(s) 381
BciT130I CCWGG 2 cut(s) 780, 950
BciVI GTATCC 1 cut(s) 269
BclI TGATCA 1 cut(s) 139
BcoDI GTCTC 5 cut(s) 11, 521, 535, 741, 810
BcuI ACTAGT 1 cut(s) 158
BfaI CTAG 4 cut(s) 159, 186, 656, 974
BfuAI ACCTGC 1 cut(s) 221
BfuI GTATCC 1 cut(s) 269
BisI GCNGC 6 cut(s) 372, 375, 378, 381, 570, 881
BlnI CCTAGG 1 cut(s) 973
BlsI GCNGC 6 cut(s) 373, 376, 379, 382, 571, 882
BmcAI AGTACT 1 cut(s) 157
Bme1390I CCNGG 2 cut(s) 780, 950
BmeT110I CYCGRG 1 cut(s) 918
BmiI GGNNCC 2 cut(s) 68, 858
BmrFI CCNGG 2 cut(s) 780, 950
BmsI GCATC 1 cut(s) 766
BpiI GAAGAC 2 cut(s) 394, 448
BpmI CTGGAG 1 cut(s) 351
Bsa29I ATCGAT 1 cut(s) 1059
BsaBI GATNNNNATC 2 cut(s) 138, 855
BsaJI CCNNGG 2 cut(s) 887, 973
BsaXI ACNNNNNCTCC 4 cut(s) 59, 89, 335, 365
Bsc4I CCNNNNNNNGG 2 cut(s) 273, 1015
Bse118I RCCGGY 1 cut(s) 1015
Bse1I ACTGG 3 cut(s) 115, 262, 346
Bse21I CCTNAGG 2 cut(s) 62, 1010
Bse3DI GCAATG 3 cut(s) 49, 277, 610
Bse8I GATNNNNATC 2 cut(s) 138, 855
BseBI CCWGG 2 cut(s) 780, 950
BseCI ATCGAT 1 cut(s) 1059
BseDI CCNNGG 2 cut(s) 887, 973
BseGI GGATG 1 cut(s) 104
BseJI GATNNNNATC 2 cut(s) 138, 855
BseLI CCNNNNNNNGG 2 cut(s) 273, 1015
BseMI GCAATG 3 cut(s) 49, 277, 610
BseMII CTCAG 2 cut(s) 516, 1001
BseNI ACTGG 3 cut(s) 115, 262, 346
BseRI GAGGAG 1 cut(s) 67
BseXI GCAGC 6 cut(s) 358, 361, 364, 367, 581, 892
BseYI CCCAGC 1 cut(s) 194
BshFI GGCC 4 cut(s) 750, 778, 1015, 1046
BshVI ATCGAT 1 cut(s) 1059
BsiHKCI CYCGRG 1 cut(s) 918
BsiSI CCGG 1 cut(s) 1016
BslFI GGGAC 2 cut(s) 110, 276
BslI CCNNNNNNNGG 2 cut(s) 273, 1015
BsmAI GTCTC 5 cut(s) 11, 521, 535, 741, 810
BsmBI CGTCTC 1 cut(s) 11
BsmFI GGGAC 2 cut(s) 110, 276
BsnI GGCC 4 cut(s) 750, 778, 1015, 1046
BsoBI CYCGRG 1 cut(s) 918
Bsp143I GATC 6 cut(s) 133, 139, 217, 850, 856, 1026
Bsp19I CCATGG 1 cut(s) 887
BspACI CCGC 3 cut(s) 87, 878, 1019
BspANI GGCC 4 cut(s) 750, 778, 1015, 1046
BspCNI CTCAG 2 cut(s) 517, 1002
BspDI ATCGAT 1 cut(s) 1059
BspHI TCATGA 1 cut(s) 142
BspLI GGNNCC 2 cut(s) 68, 858
BspMI ACCTGC 1 cut(s) 221
BspPI GGATC 4 cut(s) 212, 851, 864, 1021
BspQI GCTCTTC 1 cut(s) 657
BsrDI GCAATG 3 cut(s) 49, 277, 610
BsrFI RCCGGY 1 cut(s) 1015
BsrI ACTGG 3 cut(s) 115, 262, 346
BssAI RCCGGY 1 cut(s) 1015
BssECI CCNNGG 2 cut(s) 887, 973
BssMI GATC 6 cut(s) 133, 139, 217, 850, 856, 1026
BssNAI GTATAC 1 cut(s) 598
BssT1I CCWWGG 2 cut(s) 887, 973
Bst1107I GTATAC 1 cut(s) 598
Bst2UI CCWGG 2 cut(s) 780, 950
Bst4CI ACNGT 3 cut(s) 253, 314, 845
Bst6I CTCTTC 2 cut(s) 657, 930
BstC8I GCNNGC 1 cut(s) 1017
BstDEI CTNAG 3 cut(s) 62, 525, 1010
BstDSI CCRYGG 1 cut(s) 887
BstF5I GGATG 1 cut(s) 104
BstHHI GCGC 1 cut(s) 611
BstKTI GATC 6 cut(s) 136, 142, 220, 853, 859, 1029
BstMAI GTCTC 5 cut(s) 11, 521, 535, 741, 810
BstMBI GATC 6 cut(s) 133, 139, 217, 850, 856, 1026
BstMWI GCNNNNNNNGC 3 cut(s) 10, 377, 380
BstNI CCWGG 2 cut(s) 780, 950
BstSCI CCNGG 2 cut(s) 778, 948
BstV1I GCAGC 6 cut(s) 358, 361, 364, 367, 581, 892
BstV2I GAAGAC 2 cut(s) 394, 448
BstX2I RGATCY 1 cut(s) 856
BstYI RGATCY 1 cut(s) 856
BstZ17I GTATAC 1 cut(s) 598
Bsu15I ATCGAT 1 cut(s) 1059
Bsu36I CCTNAGG 2 cut(s) 62, 1010
BsuI GTATCC 1 cut(s) 269
BsuRI GGCC 4 cut(s) 750, 778, 1015, 1046
BsuTUI ATCGAT 1 cut(s) 1059
BtgI CCRYGG 1 cut(s) 887
BtsCI GGATG 1 cut(s) 104
BtsIMutI CAGTG 1 cut(s) 108
BveI ACCTGC 1 cut(s) 221
Cac8I GCNNGC 1 cut(s) 1017
CaiI CAGNNNCTG 1 cut(s) 374
CciI TCATGA 1 cut(s) 142
CfoI GCGC 1 cut(s) 611
Cfr10I RCCGGY 1 cut(s) 1015
ClaI ATCGAT 1 cut(s) 1059
CsiI ACCWGGT 1 cut(s) 948
Csp6I GTAC 3 cut(s) 156, 841, 892
CviAII CATG 4 cut(s) 143, 628, 740, 888
CviQI GTAC 3 cut(s) 156, 841, 892
DdeI CTNAG 3 cut(s) 62, 525, 1010
DpnI GATC 6 cut(s) 135, 141, 219, 852, 858, 1028
DpnII GATC 6 cut(s) 133, 139, 217, 850, 856, 1026
EaeI YGGCCR 2 cut(s) 748, 1044
Eam1104I CTCTTC 2 cut(s) 657, 930
EarI CTCTTC 2 cut(s) 657, 930
Eco130I CCWWGG 2 cut(s) 887, 973
Eco57I CTGAAG 2 cut(s) 684, 951
Eco81I CCTNAGG 2 cut(s) 62, 1010
Eco88I CYCGRG 1 cut(s) 918
EcoRII CCWGG 2 cut(s) 778, 948
EcoT14I CCWWGG 2 cut(s) 887, 973
ErhI CCWWGG 2 cut(s) 887, 973
Esp3I CGTCTC 1 cut(s) 11
FaeI CATG 4 cut(s) 146, 631, 743, 891
FalI AAGNNNNNCTT 2 cut(s) 440, 472
FaqI GGGAC 2 cut(s) 110, 276
FatI CATG 4 cut(s) 142, 627, 739, 887
FauI CCCGC 1 cut(s) 885
FbaI TGATCA 1 cut(s) 139
FblI GTMKAC 1 cut(s) 597
Fnu4HI GCNGC 6 cut(s) 372, 375, 378, 381, 570, 881
FokI GGATG 1 cut(s) 91
Fsp4HI GCNGC 6 cut(s) 372, 375, 378, 381, 570, 881
FspBI CTAG 4 cut(s) 159, 186, 656, 974
GlaI GCGC 1 cut(s) 610
GluI GCNGC 6 cut(s) 372, 375, 378, 381, 570, 881
GsaI CCCAGC 1 cut(s) 198
GsuI CTGGAG 1 cut(s) 351
HaeIII GGCC 4 cut(s) 750, 778, 1015, 1046
HapII CCGG 1 cut(s) 1016
HhaI GCGC 1 cut(s) 611
Hin1II CATG 4 cut(s) 146, 631, 743, 891
Hin6I GCGC 1 cut(s) 609
HinP1I GCGC 1 cut(s) 609
HincII GTYRAC 1 cut(s) 766
HindII GTYRAC 1 cut(s) 766
HinfI GANTC 3 cut(s) 529, 551, 734
HpaII CCGG 1 cut(s) 1016
HphI GGTGA 2 cut(s) 429, 644
Hpy166II GTNNAC 2 cut(s) 598, 766
Hpy188I TCNGA 3 cut(s) 34, 526, 703
Hpy188III TCNNGA 7 cut(s) 131, 137, 143, 548, 854, 920, 1009
Hpy8I GTNNAC 2 cut(s) 598, 766
HpyAV CCTTC 5 cut(s) 438, 584, 700, 708, 996
HpyCH4III ACNGT 3 cut(s) 253, 314, 845
HpyCH4V TGCA 4 cut(s) 270, 603, 757, 791
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 377, 380
HpyF3I CTNAG 3 cut(s) 62, 525, 1010
Hsp92II CATG 4 cut(s) 146, 631, 743, 891
HspAI GCGC 1 cut(s) 609
KroI GCCGGC 1 cut(s) 1015
KroNI GCCGGC 1 cut(s) 1017
Ksp22I TGATCA 1 cut(s) 139
Kzo9I GATC 6 cut(s) 133, 139, 217, 850, 856, 1026
LguI GCTCTTC 1 cut(s) 657
LmnI GCTCC 3 cut(s) 465, 888, 977
Lsp1109I GCAGC 6 cut(s) 358, 361, 364, 367, 581, 892
LweI GCATC 1 cut(s) 766
MabI ACCWGGT 1 cut(s) 948
MaeI CTAG 4 cut(s) 159, 186, 656, 974
MaeIII GTNAC 4 cut(s) 161, 407, 1001, 1033
MalI GATC 6 cut(s) 135, 141, 219, 852, 858, 1028
MboI GATC 6 cut(s) 133, 139, 217, 850, 856, 1026
MboII GAAGA 6 cut(s) 394, 448, 494, 674, 944, 947
MflI RGATCY 1 cut(s) 856
MlsI TGGCCA 2 cut(s) 750, 1046
MluCI AATT 3 cut(s) 306, 955, 1053
MluNI TGGCCA 2 cut(s) 750, 1046
MlyI GAGTC 2 cut(s) 523, 743
MmeI TCCRAC 4 cut(s) 57, 518, 652, 783
Mox20I TGGCCA 2 cut(s) 750, 1046
MroNI GCCGGC 1 cut(s) 1015
MscI TGGCCA 2 cut(s) 750, 1046
MseI TTAA 3 cut(s) 225, 309, 471
MslI CAYNNNNRTG 3 cut(s) 243, 657, 744
Msp20I TGGCCA 2 cut(s) 750, 1046
MspA1I CMGCKG 2 cut(s) 89, 371
MspI CCGG 1 cut(s) 1016
MspR9I CCNGG 2 cut(s) 780, 950
MvaI CCWGG 2 cut(s) 780, 950
MwoI GCNNNNNNNGC 3 cut(s) 10, 377, 380
NaeI GCCGGC 1 cut(s) 1017
NcoI CCATGG 1 cut(s) 887
NdeII GATC 6 cut(s) 133, 139, 217, 850, 856, 1026
NgoMIV GCCGGC 1 cut(s) 1015
NlaIII CATG 4 cut(s) 146, 631, 743, 891
NlaIV GGNNCC 2 cut(s) 68, 858
PaeR7I CTCGAG 1 cut(s) 918
PagI TCATGA 1 cut(s) 142
PaqCI CACCTGC 1 cut(s) 221
PciSI GCTCTTC 1 cut(s) 657
PdiI GCCGGC 1 cut(s) 1017
PfeI GAWTC 1 cut(s) 551
PkrI GCNGC 6 cut(s) 373, 376, 379, 382, 571, 882
PleI GAGTC 2 cut(s) 523, 742
PpsI GAGTC 2 cut(s) 523, 742
PsiI TTATAA 1 cut(s) 968
Psp6I CCWGG 2 cut(s) 778, 948
PspFI CCCAGC 1 cut(s) 194
PspGI CCWGG 2 cut(s) 778, 948
PspN4I GGNNCC 2 cut(s) 68, 858
PstNI CAGNNNCTG 1 cut(s) 374
PsuI RGATCY 1 cut(s) 856
PvuII CAGCTG 1 cut(s) 371
RsaI GTAC 3 cut(s) 157, 842, 893
RsaNI GTAC 3 cut(s) 156, 841, 892
RseI CAYNNNNRTG 3 cut(s) 243, 657, 744
SapI GCTCTTC 1 cut(s) 657
SaqAI TTAA 3 cut(s) 225, 309, 471
SatI GCNGC 6 cut(s) 372, 375, 378, 381, 570, 881
Sau3AI GATC 6 cut(s) 133, 139, 217, 850, 856, 1026
ScaI AGTACT 1 cut(s) 157
SchI GAGTC 2 cut(s) 523, 743
ScrFI CCNGG 2 cut(s) 780, 950
SexAI ACCWGGT 1 cut(s) 948
SfaNI GCATC 1 cut(s) 766
Sfr274I CTCGAG 1 cut(s) 918
SlaI CTCGAG 1 cut(s) 918
SmiMI CAYNNNNRTG 3 cut(s) 243, 657, 744
SmlI CTYRAG 1 cut(s) 918
SmoI CTYRAG 1 cut(s) 918
SpeI ACTAGT 1 cut(s) 158
Sse9I AATT 3 cut(s) 306, 955, 1053
SsiI CCGC 3 cut(s) 87, 878, 1019
SspMI CTAG 4 cut(s) 159, 186, 656, 974
StyD4I CCNGG 2 cut(s) 778, 948
StyI CCWWGG 2 cut(s) 887, 973
TaaI ACNGT 3 cut(s) 253, 314, 845
TaqI TCGA 3 cut(s) 549, 919, 1059
TasI AATT 3 cut(s) 306, 955, 1053
TatI WGTACW 1 cut(s) 155
TfiI GAWTC 1 cut(s) 551
Tru1I TTAA 3 cut(s) 225, 309, 471
Tru9I TTAA 3 cut(s) 225, 309, 471
TscAI CASTG 1 cut(s) 115
TseI GCWGC 6 cut(s) 371, 374, 377, 380, 569, 880
TspDTI ATGAA 6 cut(s) 489, 550, 603, 605, 675, 948
TspGWI ACGGA 1 cut(s) 183
TspRI CASTG 1 cut(s) 115
XapI RAATTY 1 cut(s) 955
XcmI CCANNNNNNNNNTGG 1 cut(s) 269
XhoI CTCGAG 1 cut(s) 918
XmaJI CCTAGG 1 cut(s) 973
XmiI GTMKAC 1 cut(s) 597
XspI CTAG 4 cut(s) 159, 186, 656, 974
ZrmI AGTACT 1 cut(s) 157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.