RLG00000031770

Flowering time control protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000356
Physical Location & Seq
Forward (+)
8134653 .. 8135978
1326 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031770

Sequence Viewer

Length: 1326 bp
ATGGTTCCAGAGTATCATCACCACCCCTTCGCCCCTGCTGGTCCTCATGCTCCTCCTCATGTCGATGGCTTTGGTGCGATAAGTAACAGAAAGCAGACCCAGAGAAGGACAGTTGATTACACTACCTCTGTCGTGCGATACACAGAGACTCGAAAGCGGCAGCGTGATGCAAGGGATAGAACAGTGTTGCAACCTACACCAGCAGCAGCAATCAATTCGTTGCCGCCTGTTGCATATTCGGATAACCCATCTAGGAGCTTTGCTGCAAAGTTTGTGCATGCTTGTACAAATTACAGAGCCCGTACTTGTCCGATTAATCGGGTTTTGTGGACACCTTCTGGGGGGCGTCTCATTACAGGGTCCCAAAATGGGGAGTTCACTCTTTGGGATGGTCAGTCATTTAGCTATGAATTGAGTTTTCTGGCTCACGATCAAGCGATAAGGTCTATGGCGTGGAGTTTTGATGATGAGAATTGGATCTCTGGTGATGATGGGGGATCAATAAAGTATTGGAAGAGTAACATGAACAATGTGCTAGTCAATGAATCTGCTCACCGAGAATCGGTTCGGGACTTGAGCTTCTGTAGGACTAATTTGAAGTTCTGTTCATGTTCGGATGATACTTATGTGAAAATCTGGGATTATGAAAGGTGCCAAGAAGAGTTCAGATTGACTGGCCATGGTTGGAATGTGAAGAGTGTTGACTGGCACCCAACAAAGTCTCTAATAGCTTCAGGTGGGAAAGACAGTGTTGTCAAACTGTGGGATGCTAGGACAGGGAGAGAGCTTTGTTCATTTCATGATCACAAAAATTGGGTGCATTCTGTTAAGTGGAATCGAAATGGTAACTGGCTGCTAACTGCTTCTAAGGATCAAGTCATTAAGCTTTACGACATGAGGGCTATGAAGGAACTTGAATCTTTCCGTGGGCATCGAAATGAAGTGACTGCTCTAGCTTGGCATCCTTTTCATGAAGAATATTTTGTCAGTGGGAGTAGTGATGGATCCATTTTCCATTGGCTTGTTGGGCATGAAACTCCCCAGGTTGAAGTTCCTAATGCACACAGTAACAATCACAATAACAGTGTGTGGGATCTCCAATGGCATCCTATTGGTCATATGCTTTGCAGTGGTAGCAATGATCGCACAACAAAGTTTTGGTGCAGAAATAGGTCAGGAGATAATCCCAGATTTGGTGCTGATCGAAGTTCTGCTTTTGCTGGTCACATGACTGGAAATTTTCCATTTCCATTACATGAAGGACAACCAACAATTGCTACTGGAAACCAAGGAACCATTATTCCAGGTGTTGGATTTGCAATTTAA

Protein Analysis

442

Amino Acids

50.1

Weight (kDa)

8.33

Isoelectric Point (pI)

32.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_TEP1_2nd PF25047 89 - 216 1.7e-07 TEP-1 second beta-propeller
Beta-prop_THOC3 PF25174 96 - 271 7.7e-26 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 97 - 265 1.2e-22 CDC20/Fizzy WD40 domain
Beta-prop_IFT140_1st PF23383 100 - 189 9.2e-08 IFT140 first beta-propeller
Beta-prop_WDR3_1st PF25173 102 - 216 6.6e-16 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 103 - 179 9.3e-06 WDR5 beta-propeller domain
Beta-prop_EIPR1 PF23609 106 - 255 1.5e-06 EIPR1 beta-propeller
WD40_WDHD1_1st PF24817 107 - 264 1.4e-14 WDHD1 first WD40 domain
WD40_Prp19 PF24814 114 - 307 3.1e-29 Prp19 WD40 domain
Beta-prop_WDR3_2nd PF25172 134 - 256 2.3e-12 WDR3 second beta-propeller domain
EIF3I PF24805 140 - 218 3e-07 EIF3I
Beta-prop_CAF1B_HIR1 PF24105 142 - 253 2.8e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5 PF25175 168 - 303 2.9e-28 WDR5 beta-propeller domain
WDR55 PF24796 175 - 340 9.3e-18 WDR55
Beta-prop_WDR36-Utp21_2nd PF25168 180 - 341 2.8e-17 WDR36/Utp21 second beta-propeller domain
WD40_Gbeta PF25391 192 - 308 3e-15 G protein beta WD-40 repeat protein
Beta-prop_EML_2 PF23414 197 - 341 1.2e-21 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 201 - 287 4.8e-07 WDR90/POC16, second beta-propeller
Beta-prop_WDR3_1st PF25173 212 - 340 8.9e-27 WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd PF25047 221 - 318 1.1e-11 TEP-1 second beta-propeller
Beta-prop_WDR3_2nd PF25172 222 - 342 7e-14 WDR3 second beta-propeller domain
WD40 PF00400 222 - 256 1.6e-08 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 224 - 304 5.8e-10 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5 PF25175 224 - 387 3.2e-27 WDR5 beta-propeller domain
Beta-prop_EML PF23409 225 - 330 3.5e-09 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_Aladin PF25460 225 - 339 4.1e-06 Aladin seven-bladed propeller
EIF3I PF24805 226 - 312 2.3e-10 EIF3I
WD40_MABP1-WDR62_2nd PF24782 231 - 387 2.4e-08 MABP1/WDR62 second WD40 domain
Beta-prop_WDR19_1st PF23389 234 - 383 8.9e-07 WDR19 first beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 246 - 388 4e-09 WDR36/Utp21 first beta-propeller
Beta-prop_EIPR1 PF23609 258 - 387 4.5e-07 EIPR1 beta-propeller
WD40 PF00400 261 - 298 7.1e-08 WD domain, G-beta repeat
WD40_CDC20-Fz PF24807 261 - 392 6.8e-22 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 269 - 387 1.7e-22 THOC3 beta-propeller domain
Beta-prop_DCAF4 PF23761 269 - 329 7.4e-06 DDB1- and CUL4-associated factor 4 beta-propeller domain
WD40_WDHD1_1st PF24817 273 - 378 1.2e-12 WDHD1 first WD40 domain
Beta-prop_WDR90_POC16_2nd PF23393 285 - 380 4.3e-06 WDR90/POC16, second beta-propeller
WD40 PF00400 303 - 340 5.8e-06 WD domain, G-beta repeat
WD40_Prp19 PF24814 306 - 387 2.4e-09 Prp19 WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000356)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13480 AT5G13480 AT5G13480 AT5G13480
fragaria_vesca FvH4_4g16141 FvH4_5g25490 FvH4_5g25550 FvH4_6g22190 FvH4_6g23330 FvH4_7g02880
malus_domestica MD02G1288700.v1.1 MD07G1038200.v1.1
prunus_persica Prupe.2G034300_v2.0.a1
pyrus_communis pycom02g24420 pycom07g02650
rosa_chinensis RchiOBHm_Chr1g0323831 RchiOBHm_Chr3g0482821 RchiOBHm_Chr3g0482981 RchiOBHm_Chr3g0486211 RchiOBHm_Chr4g0404661 RchiOBHm_Chr5g0010661
rosa_laevigata RLG00000012304 RLG00000017204 RLG00000017697 RLG00000020158 RLG00000030265 RLG00000031770 RLG00000035414
rosa_multiflora Rmu_co8066382.1_g000001 Rmu_co8299121.1_g000001 Rmu_co8338957.1_g000001 Rmu_sc0001371.1_g000014 Rmu_sc0002634.1_g000006 Rmu_sc0004124.1_g000001 Rmu_sc0004540.1_g000008 Rmu_sc0006103.1_g000005 Rmu_sc0006571.1_g000003 Rmu_sc0006601.1_g000005 Rmu_sc0006601.1_g000008 Rmu_sc0006601.1_g000010 Rmu_sc0009883.1_g000005 Rmu_sc0011602.1_g000010 Rmu_sc0011602.1_g000011 Rmu_sc0012513.1_g000008 Rmu_sc0025336.1_g000001 Rmu_sc0026709.1_g000001 Rmu_ssc0000175.1_g000002 Rmu_ssc0000175.1_g000031
rosa_roxburghii Rroxscaffold_1G00027770 Rroxscaffold_1G00065710 Rroxscaffold_3G00243370 Rroxscaffold_3G00243410 Rroxscaffold_3G00243440 Rroxscaffold_3G00243490 Rroxscaffold_4G00326390 Rroxscaffold_6G00398770 Rroxscaffold_6G00398910 Rroxscaffold_6G00398940
rosa_rugosa Rorug01G0039800 Rorug01G0039900 Rorug03G0198000 Rorug03G0198100 Rorug03G0199200 Rorug04G0451600
rosa_samantha Rh1AG057200 Rh1BG048200 Rh1CG058500 Rh1DG062300 Rh1DG062400 Rh2AG304100 Rh2CG002400 Rh2CG642500 Rh2DG328100 Rh3AG250000 Rh3BG285200 Rh3BG286000 Rh3CG284000 Rh3CG285400 Rh3CG307500 Rh3DG278700 Rh3DG279600 Rh3DG281000 Rh3DG303900 Rh4AG124300 Rh4BG118400 Rh4CG132400 Rh4CG132500 Rh4DG015900 Rh5AG083200 Rh5AG417500 Rh5AG538800 Rh5BG078500 Rh5BG447700 Rh5BG541600 Rh5BG541700 Rh5CG091200 Rh5CG564200 Rh5CG564300 Rh5DG078600 Rh5DG545800
rosa_wichuraiana Rw0G000660 Rw0G022360 Rw1G004890 Rw3G022520 Rw3G022590 Rw3G022710 Rw3G024280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 752
AccB1I GGYRCC 2 cut(s) 651, 708
AccB7I CCANNNNNTGG 1 cut(s) 1310
AciI CCGC 2 cut(s) 157, 224
AclWI GGATC 6 cut(s) 485, 505, 879, 999, 1012, 1101
AcoI YGGCCR 1 cut(s) 676
AcsI RAATTY 1 cut(s) 1237
AcuI CTGAAG 1 cut(s) 717
AcyI GRCGYC 1 cut(s) 346
AfaI GTAC 2 cut(s) 286, 304
AfiI CCNNNNNNNGG 7 cut(s) 105, 341, 369, 370, 562, 1193, 1310
AgsI TTSAA 3 cut(s) 598, 917, 1049
AjnI CCWGG 2 cut(s) 1041, 1303
AloI GAACNNNNNNTCC 2 cut(s) 1285, 1317
AluBI AGCT 7 cut(s) 258, 405, 579, 731, 787, 886, 956
AluI AGCT 7 cut(s) 258, 405, 579, 731, 787, 886, 956
Alw26I GTCTC 3 cut(s) 140, 353, 726
AlwI GGATC 6 cut(s) 485, 505, 879, 999, 1012, 1101
AoxI GGCC 1 cut(s) 676
ApeKI GCWGC 5 cut(s) 160, 203, 206, 263, 853
ApoI RAATTY 1 cut(s) 1237
AseI ATTAAT 1 cut(s) 315
Asp700I GAANNNNTTC 1 cut(s) 564
AspS9I GGNCC 2 cut(s) 41, 360
AsuHPI GGTGA 3 cut(s) 11, 497, 545
AvaII GGWCC 2 cut(s) 41, 360
BaeI ACNNNNGTAYC 2 cut(s) 612, 645
BalI TGGCCA 1 cut(s) 678
BamHI GGATCC 1 cut(s) 1004
BanI GGYRCC 2 cut(s) 651, 708
BanII GRGCYC 1 cut(s) 301
BbvI GCAGC 5 cut(s) 172, 215, 218, 250, 840
BccI CCATC 5 cut(s) 59, 256, 383, 485, 995
BcgI CGANNNNNNTGC 2 cut(s) 198, 232
BciT130I CCWGG 2 cut(s) 1043, 1305
BclI TGATCA 1 cut(s) 802
BcoDI GTCTC 3 cut(s) 140, 353, 726
BfaI CTAG 4 cut(s) 252, 536, 771, 953
BfmI CTRYAG 1 cut(s) 583
BisI GCNGC 7 cut(s) 158, 161, 204, 207, 224, 264, 854
BlsI GCNGC 7 cut(s) 159, 162, 205, 208, 225, 265, 855
Bme1390I CCNGG 2 cut(s) 1043, 1305
Bme18I GGWCC 2 cut(s) 41, 360
BmgT120I GGNCC 2 cut(s) 41, 360
BmiI GGNNCC 7 cut(s) 6, 361, 362, 653, 710, 1006, 1294
BmrFI CCNGG 2 cut(s) 1043, 1305
BmsI GCATC 5 cut(s) 157, 757, 940, 970, 1114
BpuEI CTTGAG 1 cut(s) 595
BsaHI GRCGYC 1 cut(s) 346
BsaJI CCNNGG 4 cut(s) 679, 925, 1041, 1288
Bsc4I CCNNNNNNNGG 7 cut(s) 105, 341, 369, 370, 562, 1193, 1310
Bse1I ACTGG 5 cut(s) 679, 710, 854, 1237, 1285
Bse3DI GCAATG 1 cut(s) 1144
BseBI CCWGG 2 cut(s) 1043, 1305
BseDI CCNNGG 4 cut(s) 679, 925, 1041, 1288
BseGI GGATG 5 cut(s) 394, 622, 772, 961, 1105
BseLI CCNNNNNNNGG 7 cut(s) 105, 341, 369, 370, 562, 1193, 1310
BseMI GCAATG 1 cut(s) 1144
BseNI ACTGG 5 cut(s) 679, 710, 854, 1237, 1285
BseRI GAGGAG 2 cut(s) 42, 45
BseXI GCAGC 5 cut(s) 172, 215, 218, 250, 840
BsgI GTGCAG 1 cut(s) 1183
BshFI GGCC 1 cut(s) 678
BshNI GGYRCC 2 cut(s) 651, 708
BslFI GGGAC 2 cut(s) 346, 584
BslI CCNNNNNNNGG 7 cut(s) 105, 341, 369, 370, 562, 1193, 1310
BsmAI GTCTC 3 cut(s) 140, 353, 726
BsmBI CGTCTC 1 cut(s) 353
BsmFI GGGAC 2 cut(s) 346, 584
BsmI GAATGC 1 cut(s) 820
BsnI GGCC 1 cut(s) 678
Bsp1286I GDGCHC 1 cut(s) 301
Bsp1407I TGTACA 1 cut(s) 284
Bsp143I GATC 9 cut(s) 430, 477, 497, 802, 871, 1004, 1093, 1141, 1201
Bsp19I CCATGG 1 cut(s) 679
BspACI CCGC 2 cut(s) 157, 224
BspANI GGCC 1 cut(s) 678
BspHI TCATGA 2 cut(s) 799, 970
BspLI GGNNCC 7 cut(s) 6, 361, 362, 653, 710, 1006, 1294
BspPI GGATC 6 cut(s) 485, 505, 879, 999, 1012, 1101
BspT107I GGYRCC 2 cut(s) 651, 708
BsrDI GCAATG 1 cut(s) 1144
BsrGI TGTACA 1 cut(s) 284
BsrI ACTGG 5 cut(s) 679, 710, 854, 1237, 1285
BssECI CCNNGG 4 cut(s) 679, 925, 1041, 1288
BssMI GATC 9 cut(s) 430, 477, 497, 802, 871, 1004, 1093, 1141, 1201
BssNI GRCGYC 1 cut(s) 346
BssT1I CCWWGG 2 cut(s) 679, 1288
Bst2UI CCWGG 2 cut(s) 1043, 1305
Bst4CI ACNGT 6 cut(s) 112, 184, 749, 762, 1067, 1085
Bst6I CTCTTC 3 cut(s) 509, 654, 689
BstACI GRCGYC 1 cut(s) 346
BstAUI TGTACA 1 cut(s) 284
BstC8I GCNNGC 1 cut(s) 279
BstDEI CTNAG 1 cut(s) 867
BstDSI CCRYGG 2 cut(s) 679, 925
BstF5I GGATG 5 cut(s) 394, 622, 772, 961, 1105
BstKTI GATC 9 cut(s) 433, 480, 500, 805, 874, 1007, 1096, 1144, 1204
BstMAI GTCTC 3 cut(s) 140, 353, 726
BstMBI GATC 9 cut(s) 430, 477, 497, 802, 871, 1004, 1093, 1141, 1201
BstMWI GCNNNNNNNGC 3 cut(s) 1027, 1134, 1143
BstNI CCWGG 2 cut(s) 1043, 1305
BstNSI RCATGY 1 cut(s) 281
BstSCI CCNGG 2 cut(s) 1041, 1303
BstSFI CTRYAG 1 cut(s) 583
BstV1I GCAGC 5 cut(s) 172, 215, 218, 250, 840
BstX2I RGATCY 3 cut(s) 477, 1004, 1093
BstYI RGATCY 3 cut(s) 477, 1004, 1093
BsuRI GGCC 1 cut(s) 678
BtgI CCRYGG 2 cut(s) 679, 925
BtsCI GGATG 5 cut(s) 394, 622, 772, 961, 1105
BtsI GCAGTG 1 cut(s) 1135
BtsIMutI CAGTG 5 cut(s) 189, 754, 994, 1090, 1135
Cac8I GCNNGC 1 cut(s) 279
CciI TCATGA 2 cut(s) 799, 970
Cfr13I GGNCC 2 cut(s) 41, 360
CseI GACGC 1 cut(s) 335
Csp6I GTAC 2 cut(s) 285, 303
CviQI GTAC 2 cut(s) 285, 303
DdeI CTNAG 1 cut(s) 867
DpnI GATC 9 cut(s) 432, 479, 499, 804, 873, 1006, 1095, 1143, 1203
DpnII GATC 9 cut(s) 430, 477, 497, 802, 871, 1004, 1093, 1141, 1201
DrdI GACNNNNNNGTC 1 cut(s) 752
DseDI GACNNNNNNGTC 1 cut(s) 752
EaeI YGGCCR 1 cut(s) 676
Eam1104I CTCTTC 3 cut(s) 509, 654, 689
EarI CTCTTC 3 cut(s) 509, 654, 689
Eco130I CCWWGG 2 cut(s) 679, 1288
Eco24I GRGCYC 1 cut(s) 301
Eco47I GGWCC 2 cut(s) 41, 360
Eco57I CTGAAG 1 cut(s) 717
EcoO109I RGGNCCY 1 cut(s) 360
EcoRII CCWGG 2 cut(s) 1041, 1303
EcoT14I CCWWGG 2 cut(s) 679, 1288
EcoT38I GRGCYC 1 cut(s) 301
ErhI CCWWGG 2 cut(s) 679, 1288
Esp3I CGTCTC 1 cut(s) 353
FalI AAGNNNNNCTT 2 cut(s) 1198, 1230
FaqI GGGAC 2 cut(s) 346, 584
FauNDI CATATG 1 cut(s) 1119
FbaI TGATCA 1 cut(s) 802
Fnu4HI GCNGC 7 cut(s) 158, 161, 204, 207, 224, 264, 854
FokI GGATG 5 cut(s) 401, 629, 779, 948, 1092
FriOI GRGCYC 1 cut(s) 301
Fsp4HI GCNGC 7 cut(s) 158, 161, 204, 207, 224, 264, 854
FspBI CTAG 4 cut(s) 252, 536, 771, 953
GluI GCNGC 7 cut(s) 158, 161, 204, 207, 224, 264, 854
HaeIII GGCC 1 cut(s) 678
HgaI GACGC 1 cut(s) 335
Hin1I GRCGYC 1 cut(s) 346
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HindIII AAGCTT 1 cut(s) 884
HinfI GANTC 5 cut(s) 148, 545, 560, 835, 917
HphI GGTGA 3 cut(s) 11, 497, 545
Hpy166II GTNNAC 3 cut(s) 330, 378, 703
Hpy188I TCNGA 4 cut(s) 241, 312, 616, 668
Hpy188III TCNNGA 6 cut(s) 8, 428, 569, 800, 971, 1176
Hpy8I GTNNAC 3 cut(s) 330, 378, 703
HpyAV CCTTC 5 cut(s) 37, 99, 345, 901, 1253
HpyCH4III ACNGT 6 cut(s) 112, 184, 749, 762, 1067, 1085
HpyF10VI GCNNNNNNNGC 3 cut(s) 1027, 1134, 1143
HpyF3I CTNAG 1 cut(s) 867
Hsp92I GRCGYC 1 cut(s) 346
KflI GGGWCCC 1 cut(s) 360
Ksp22I TGATCA 1 cut(s) 802
Kzo9I GATC 9 cut(s) 430, 477, 497, 802, 871, 1004, 1093, 1141, 1201
LmnI GCTCC 2 cut(s) 55, 255
Lsp1109I GCAGC 5 cut(s) 172, 215, 218, 250, 840
LweI GCATC 5 cut(s) 157, 757, 940, 970, 1114
MaeI CTAG 4 cut(s) 252, 536, 771, 953
MaeIII GTNAC 6 cut(s) 83, 518, 845, 943, 1067, 1223
MalI GATC 9 cut(s) 432, 479, 499, 804, 873, 1006, 1095, 1143, 1203
MboI GATC 9 cut(s) 430, 477, 497, 802, 871, 1004, 1093, 1141, 1201
MboII GAAGA 4 cut(s) 526, 671, 706, 986
MfeI CAATTG 1 cut(s) 1272
MflI RGATCY 3 cut(s) 477, 1004, 1093
MhlI GDGCHC 1 cut(s) 301
MlsI TGGCCA 1 cut(s) 678
MluCI AATT 9 cut(s) 214, 289, 410, 472, 592, 811, 1237, 1272, 1320
MluNI TGGCCA 1 cut(s) 678
MlyI GAGTC 1 cut(s) 142
MmeI TCCRAC 2 cut(s) 665, 1291
MnlI CCTC 5 cut(s) 54, 63, 66, 136, 891
Mox20I TGGCCA 1 cut(s) 678
MroXI GAANNNNTTC 1 cut(s) 564
MscI TGGCCA 1 cut(s) 678
MseI TTAA 4 cut(s) 315, 828, 882, 1324
MslI CAYNNNNRTG 2 cut(s) 63, 936
Msp20I TGGCCA 1 cut(s) 678
MspR9I CCNGG 2 cut(s) 1043, 1305
MunI CAATTG 1 cut(s) 1272
Mva1269I GAATGC 1 cut(s) 820
MvaI CCWGG 2 cut(s) 1043, 1305
MwoI GCNNNNNNNGC 3 cut(s) 1027, 1134, 1143
NcoI CCATGG 1 cut(s) 679
NdeI CATATG 1 cut(s) 1119
NdeII GATC 9 cut(s) 430, 477, 497, 802, 871, 1004, 1093, 1141, 1201
NlaIV GGNNCC 7 cut(s) 6, 361, 362, 653, 710, 1006, 1294
NmuCI GTSAC 2 cut(s) 943, 1223
NspI RCATGY 1 cut(s) 281
PaeI GCATGC 1 cut(s) 281
PagI TCATGA 2 cut(s) 799, 970
PctI GAATGC 1 cut(s) 820
PdmI GAANNNNTTC 1 cut(s) 564
PfeI GAWTC 4 cut(s) 545, 560, 835, 917
PflMI CCANNNNNTGG 1 cut(s) 1310
PkrI GCNGC 7 cut(s) 159, 162, 205, 208, 225, 265, 855
PleI GAGTC 1 cut(s) 142
PpsI GAGTC 1 cut(s) 142
PpuMI RGGWCCY 1 cut(s) 360
PshBI ATTAAT 1 cut(s) 315
Psp5II RGGWCCY 1 cut(s) 360
Psp6I CCWGG 2 cut(s) 1041, 1303
PspGI CCWGG 2 cut(s) 1041, 1303
PspN4I GGNNCC 7 cut(s) 6, 361, 362, 653, 710, 1006, 1294
PspPI GGNCC 2 cut(s) 41, 360
PspPPI RGGWCCY 1 cut(s) 360
PsuI RGATCY 3 cut(s) 477, 1004, 1093
RsaI GTAC 2 cut(s) 286, 304
RsaNI GTAC 2 cut(s) 285, 303
RseI CAYNNNNRTG 2 cut(s) 63, 936
SaqAI TTAA 4 cut(s) 315, 828, 882, 1324
SatI GCNGC 7 cut(s) 158, 161, 204, 207, 224, 264, 854
Sau3AI GATC 9 cut(s) 430, 477, 497, 802, 871, 1004, 1093, 1141, 1201
Sau96I GGNCC 2 cut(s) 41, 360
SchI GAGTC 1 cut(s) 142
ScrFI CCNGG 2 cut(s) 1043, 1305
SduI GDGCHC 1 cut(s) 301
SfaNI GCATC 5 cut(s) 157, 757, 940, 970, 1114
SfcI CTRYAG 1 cut(s) 583
SinI GGWCC 2 cut(s) 41, 360
SmiMI CAYNNNNRTG 2 cut(s) 63, 936
SmlI CTYRAG 1 cut(s) 574
SmoI CTYRAG 1 cut(s) 574
SphI GCATGC 1 cut(s) 281
Sse9I AATT 9 cut(s) 214, 289, 410, 472, 592, 811, 1237, 1272, 1320
SsiI CCGC 2 cut(s) 157, 224
SspI AATATT 1 cut(s) 980
SspMI CTAG 4 cut(s) 252, 536, 771, 953
StyD4I CCNGG 2 cut(s) 1041, 1303
StyI CCWWGG 2 cut(s) 679, 1288
TaaI ACNGT 6 cut(s) 112, 184, 749, 762, 1067, 1085
TaqI TCGA 5 cut(s) 63, 151, 838, 934, 1204
TasI AATT 9 cut(s) 214, 289, 410, 472, 592, 811, 1237, 1272, 1320
TatI WGTACW 1 cut(s) 284
TauI GCSGC 2 cut(s) 160, 226
TfiI GAWTC 4 cut(s) 545, 560, 835, 917
Tru1I TTAA 4 cut(s) 315, 828, 882, 1324
Tru9I TTAA 4 cut(s) 315, 828, 882, 1324
TscAI CASTG 5 cut(s) 189, 754, 994, 1090, 1135
TseFI GTSAC 2 cut(s) 943, 1223
TseI GCWGC 5 cut(s) 160, 203, 206, 263, 853
Tsp45I GTSAC 2 cut(s) 943, 1223
TspGWI ACGGA 1 cut(s) 914
TspRI CASTG 5 cut(s) 189, 754, 994, 1090, 1135
Van91I CCANNNNNTGG 1 cut(s) 1310
VpaK11BI GGWCC 2 cut(s) 41, 360
VspI ATTAAT 1 cut(s) 315
XapI RAATTY 1 cut(s) 1237
XceI RCATGY 1 cut(s) 281
XcmI CCANNNNNNNNNTGG 1 cut(s) 1022
XmnI GAANNNNTTC 1 cut(s) 564
XspI CTAG 4 cut(s) 252, 536, 771, 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.