Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000356

Physical Location & Seq

Genomic Coordinates Forward (+)

35297045 .. 35297994

Gene Structure 950 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00027770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 864 bp

ATGGCCCATCACCACCACCCCTACGCCCGACCCTACGCCCAGAATCGAACCTGTTCTTCGATTAACAACAACCCATTTGCTGCCCAGTTTGTGCGCTCTCGTTTAAATTACAGAGCCCCTTCTTCGATCAATCGAGTTTTATGGACACCTTCTGGGAGGCGTCTTATTACAGGCTCTCAAAACGGGGAGTTCACTCTTTGGAACGGTGAGTCATTTAAGCATGAATTGAGGATTCAGGGTCATGATCACGCAATCAGGTCCATGGCGTGGAGTTTTGGTGATCAAGATTGGATCTCTGGTGATGATGGAGGCACAATCAGGTATTGGAAGAGTAACATGATTAATGTGCTAGTCAATGAATCTGCTCACCAAGAATCGGTTCGGGACTTGAGCTTCTGTCGGAGTAATTTGAAGTTTTGTTCATGTTCCGATGATACTAGTGTTAAAATCTGGGATTTTGAACGGTGCCAACAGGAGCAGACACTGACCGGCCATGGTTGGAATGTCAAGAGTGTTGACTGGCACCCCGCAAACTCTCTAATAGCTTCGGGTGGGAAAGACAGTGTTGTCAAACTGTGGGATGCTAGGTCACGCAGAGAACTTTGTTCGTTTTATGATCACAAAAATTGGGTGCATTCTGTCAAGTGGAACCGAAATGGTAACTGGCTGCTAACTGCTTCCAAGGATCATGTCATTAAGCTTTACGACTTGAGGGCTATGAAGGAACTCAAATCTTTCCGCGGCCATCAGAACCAAGTGACTGCTCTAGCTTGGCATCCTCTTACTGAAGACTATTTTGTCAGTGGGAGTAGTGATGGATCCATTTTCCATTGGCTTGTTGGGCATGTCACTCCCCAGTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

WD40

Protein Analysis

287

Amino Acids

33.18

Weight (kDa)

9.03

Isoelectric Point (pI)

38.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	40 - 201	6.6e-23	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	40 - 157	5e-16	WDR3 first beta-propeller domain
Beta-prop_IFT140_1st	PF23383	41 - 126	8.4e-09	IFT140 first beta-propeller
Beta-prop_THOC3	PF25174	41 - 111	5.6e-08	THOC3 beta-propeller domain
WD40_Gbeta	PF25391	42 - 246	2.7e-19	G protein beta WD-40 repeat protein
Beta-prop_WDR5	PF25175	42 - 134	4.5e-09	WDR5 beta-propeller domain
Beta-prop_EIPR1	PF23609	43 - 193	3.9e-07	EIPR1 beta-propeller
WD40_Prp19	PF24814	49 - 246	2e-31	Prp19 WD40 domain
EIF3I	PF24805	74 - 160	1.2e-07	EIF3I
WD40_MABP1-WDR62_2nd	PF24782	85 - 256	8.4e-12	MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd	PF25047	87 - 278	4.2e-17	TEP-1 second beta-propeller
Beta-prop_WDR5	PF25175	104 - 221	5e-23	WDR5 beta-propeller domain
WDR55	PF24796	114 - 280	5.4e-19	WDR55
Beta-prop_WDR36-Utp21_2nd	PF25168	118 - 278	1.7e-19	WDR36/Utp21 second beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	122 - 199	1.8e-09	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	122 - 195	1e-10	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	123 - 201	7e-17	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	125 - 201	4.5e-10	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	135 - 279	1.8e-21	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	139 - 227	7.9e-08	WDR90/POC16, second beta-propeller
Beta-prop_WDR3_1st	PF25173	147 - 278	1.9e-28	WDR3 first beta-propeller domain
WD40	PF00400	157 - 194	8.8e-10	WD domain, G-beta repeat
Beta-prop_EML	PF23409	163 - 269	2.2e-09	Echinoderm microtubule-associated protein first beta-propeller
EIF3I	PF24805	167 - 262	8.3e-11	EIF3I
Beta-prop_CAF1B_HIR1	PF24105	181 - 242	7.8e-06	CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz	PF24807	190 - 278	8.7e-15	CDC20/Fizzy WD40 domain
WD40	PF00400	201 - 236	5.3e-08	WD domain, G-beta repeat
Beta-prop_DCAF4	PF23761	202 - 261	2.6e-06	DDB1- and CUL4-associated factor 4 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	203 - 278	1.9e-07	WDR3 second beta-propeller domain
Beta-prop_WDR5	PF25175	203 - 280	2e-14	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	207 - 278	6.1e-17	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	211 - 280	2.9e-10	WDHD1 first WD40 domain
WD40	PF00400	241 - 278	5.7e-06	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000356)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13480 AT5G13480 AT5G13480 AT5G13480
fragaria_vesca	FvH4_4g16141 FvH4_5g25490 FvH4_5g25550 FvH4_6g22190 FvH4_6g23330 FvH4_7g02880
malus_domestica	MD02G1288700.v1.1 MD07G1038200.v1.1
prunus_persica	Prupe.2G034300_v2.0.a1
pyrus_communis	pycom02g24420 pycom07g02650
rosa_chinensis	RchiOBHm_Chr1g0323831 RchiOBHm_Chr3g0482821 RchiOBHm_Chr3g0482981 RchiOBHm_Chr3g0486211 RchiOBHm_Chr4g0404661 RchiOBHm_Chr5g0010661
rosa_laevigata	RLG00000012304 RLG00000017204 RLG00000017697 RLG00000020158 RLG00000030265 RLG00000031770 RLG00000035414
rosa_multiflora	Rmu_co8066382.1_g000001 Rmu_co8299121.1_g000001 Rmu_co8338957.1_g000001 Rmu_sc0001371.1_g000014 Rmu_sc0002634.1_g000006 Rmu_sc0004124.1_g000001 Rmu_sc0004540.1_g000008 Rmu_sc0006103.1_g000005 Rmu_sc0006571.1_g000003 Rmu_sc0006601.1_g000005 Rmu_sc0006601.1_g000008 Rmu_sc0006601.1_g000010 Rmu_sc0009883.1_g000005 Rmu_sc0011602.1_g000010 Rmu_sc0011602.1_g000011 Rmu_sc0012513.1_g000008 Rmu_sc0025336.1_g000001 Rmu_sc0026709.1_g000001 Rmu_ssc0000175.1_g000002 Rmu_ssc0000175.1_g000031
rosa_roxburghii	Rroxscaffold_1G00027770 Rroxscaffold_1G00065710 Rroxscaffold_3G00243370 Rroxscaffold_3G00243410 Rroxscaffold_3G00243440 Rroxscaffold_3G00243490 Rroxscaffold_4G00326390 Rroxscaffold_6G00398770 Rroxscaffold_6G00398910 Rroxscaffold_6G00398940
rosa_rugosa	Rorug01G0039800 Rorug01G0039900 Rorug03G0198000 Rorug03G0198100 Rorug03G0199200 Rorug04G0451600
rosa_samantha	Rh1AG057200 Rh1BG048200 Rh1CG058500 Rh1DG062300 Rh1DG062400 Rh2AG304100 Rh2CG002400 Rh2CG642500 Rh2DG328100 Rh3AG250000 Rh3BG285200 Rh3BG286000 Rh3CG284000 Rh3CG285400 Rh3CG307500 Rh3DG278700 Rh3DG279600 Rh3DG281000 Rh3DG303900 Rh4AG124300 Rh4BG118400 Rh4CG132400 Rh4CG132500 Rh4DG015900 Rh5AG083200 Rh5AG417500 Rh5AG538800 Rh5BG078500 Rh5BG447700 Rh5BG541600 Rh5BG541700 Rh5CG091200 Rh5CG564200 Rh5CG564300 Rh5DG078600 Rh5DG545800
rosa_wichuraiana	Rw0G000660 Rw0G022360 Rw1G004890 Rw3G022520 Rw3G022590 Rw3G022710 Rw3G024280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	566, 797
AccB1I	GGYRCC	2 cut(s)	465, 522
AccB7I	CCANNNNNTGG	1 cut(s)	267
AccII	CGCG	1 cut(s)	741
AciI	CCGC	3 cut(s)	528, 739, 741
AclWI	GGATC	4 cut(s)	299, 693, 813, 826
AcoI	YGGCCR	2 cut(s)	490, 742
AcuI	CTGAAG	1 cut(s)	807
AcyI	GRCGYC	1 cut(s)	160
AfiI	CCNNNNNNNGG	2 cut(s)	267, 376
AgsI	TTSAA	2 cut(s)	412, 461
AhlI	ACTAGT	1 cut(s)	437
AjuI	GAANNNNNNNTTGG	2 cut(s)	363, 395
AluBI	AGCT	4 cut(s)	393, 545, 700, 770
AluI	AGCT	4 cut(s)	393, 545, 700, 770
AlwI	GGATC	4 cut(s)	299, 693, 813, 826
AlwNI	CAGNNNCTG	1 cut(s)	484
AoxI	GGCC	3 cut(s)	3, 490, 742
ApeKI	GCWGC	2 cut(s)	80, 667
AseI	ATTAAT	1 cut(s)	342
Asp700I	GAANNNNTTC	2 cut(s)	52, 378
AspLEI	GCGC	1 cut(s)	96
AspS9I	GGNCC	2 cut(s)	4, 258
AsuHPI	GGTGA	4 cut(s)	218, 290, 311, 359
AvaII	GGWCC	1 cut(s)	258
BaeI	ACNNNNGTAYC	2 cut(s)	426, 459
BamHI	GGATCC	1 cut(s)	818
BanI	GGYRCC	2 cut(s)	465, 522
BanII	GRGCYC	1 cut(s)	118
BbsI	GAAGAC	1 cut(s)	795
BbvI	GCAGC	2 cut(s)	67, 654
BccI	CCATC	4 cut(s)	15, 299, 753, 809
BclI	TGATCA	3 cut(s)	244, 280, 616
BcuI	ACTAGT	1 cut(s)	437
BfaI	CTAG	4 cut(s)	350, 438, 585, 767
BisI	GCNGC	3 cut(s)	81, 668, 742
BlsI	GCNGC	3 cut(s)	82, 669, 743
Bme18I	GGWCC	1 cut(s)	258
BmgT120I	GGNCC	2 cut(s)	4, 258
BmiI	GGNNCC	4 cut(s)	467, 524, 650, 820
BmrI	ACTGGG	2 cut(s)	79, 850
BmsI	GCATC	2 cut(s)	571, 784
BmuI	ACTGGG	2 cut(s)	79, 850
BpiI	GAAGAC	1 cut(s)	795
BpuEI	CTTGAG	2 cut(s)	409, 730
BsaHI	GRCGYC	1 cut(s)	160
BsaJI	CCNNGG	4 cut(s)	261, 493, 681, 739
BsaXI	ACNNNNNCTCC	2 cut(s)	262, 292
Bsc4I	CCNNNNNNNGG	2 cut(s)	267, 376
Bse118I	RCCGGY	1 cut(s)	488
Bse1I	ACTGG	4 cut(s)	85, 524, 668, 856
BseDI	CCNNGG	4 cut(s)	261, 493, 681, 739
BseGI	GGATG	2 cut(s)	586, 775
BseLI	CCNNNNNNNGG	2 cut(s)	267, 376
BseNI	ACTGG	4 cut(s)	85, 524, 668, 856
BseXI	GCAGC	2 cut(s)	67, 654
Bsh1236I	CGCG	1 cut(s)	741
BshFI	GGCC	3 cut(s)	5, 492, 744
BshNI	GGYRCC	2 cut(s)	465, 522
BsiSI	CCGG	1 cut(s)	489
BslFI	GGGAC	1 cut(s)	398
BslI	CCNNNNNNNGG	2 cut(s)	267, 376
BsmFI	GGGAC	1 cut(s)	398
BsmI	GAATGC	1 cut(s)	634
BsnI	GGCC	3 cut(s)	5, 492, 744
Bsp1286I	GDGCHC	1 cut(s)	118
Bsp143I	GATC	7 cut(s)	126, 244, 280, 291, 616, 685, 818
Bsp19I	CCATGG	2 cut(s)	261, 493
BspACI	CCGC	3 cut(s)	528, 739, 741
BspANI	GGCC	3 cut(s)	5, 492, 744
BspFNI	CGCG	1 cut(s)	741
BspHI	TCATGA	1 cut(s)	241
BspLI	GGNNCC	4 cut(s)	467, 524, 650, 820
BspPI	GGATC	4 cut(s)	299, 693, 813, 826
BspT107I	GGYRCC	2 cut(s)	465, 522
BsrFI	RCCGGY	1 cut(s)	488
BsrI	ACTGG	4 cut(s)	85, 524, 668, 856
BssAI	RCCGGY	1 cut(s)	488
BssECI	CCNNGG	4 cut(s)	261, 493, 681, 739
BssMI	GATC	7 cut(s)	126, 244, 280, 291, 616, 685, 818
BssNI	GRCGYC	1 cut(s)	160
BssT1I	CCWWGG	3 cut(s)	261, 493, 681
Bst4CI	ACNGT	4 cut(s)	206, 465, 563, 576
Bst6I	CTCTTC	1 cut(s)	323
BstACI	GRCGYC	1 cut(s)	160
BstDSI	CCRYGG	3 cut(s)	261, 493, 739
BstF5I	GGATG	2 cut(s)	586, 775
BstFNI	CGCG	1 cut(s)	741
BstHHI	GCGC	1 cut(s)	96
BstKTI	GATC	7 cut(s)	129, 247, 283, 294, 619, 688, 821
BstMBI	GATC	7 cut(s)	126, 244, 280, 291, 616, 685, 818
BstMWI	GCNNNNNNNGC	1 cut(s)	841
BstNSI	RCATGY	1 cut(s)	848
BstUI	CGCG	1 cut(s)	741
BstV1I	GCAGC	2 cut(s)	67, 654
BstV2I	GAAGAC	1 cut(s)	795
BstX2I	RGATCY	2 cut(s)	291, 818
BstYI	RGATCY	2 cut(s)	291, 818
BsuRI	GGCC	3 cut(s)	5, 492, 744
BtgI	CCRYGG	3 cut(s)	261, 493, 739
BtsCI	GGATG	2 cut(s)	586, 775
BtsIMutI	CAGTG	4 cut(s)	482, 568, 808, 863
CaiI	CAGNNNCTG	1 cut(s)	484
CciI	TCATGA	1 cut(s)	241
CfoI	GCGC	1 cut(s)	96
Cfr10I	RCCGGY	1 cut(s)	488
Cfr13I	GGNCC	2 cut(s)	4, 258
Cfr42I	CCGCGG	1 cut(s)	742
CseI	GACGC	1 cut(s)	149
CviAII	CATG	8 cut(s)	221, 242, 262, 337, 423, 494, 689, 845
DpnI	GATC	7 cut(s)	128, 246, 282, 293, 618, 687, 820
DpnII	GATC	7 cut(s)	126, 244, 280, 291, 616, 685, 818
DraI	TTTAAA	1 cut(s)	105
DrdI	GACNNNNNNGTC	2 cut(s)	566, 797
DseDI	GACNNNNNNGTC	2 cut(s)	566, 797
EaeI	YGGCCR	2 cut(s)	490, 742
Eam1104I	CTCTTC	1 cut(s)	323
EarI	CTCTTC	1 cut(s)	323
Eco130I	CCWWGG	3 cut(s)	261, 493, 681
Eco24I	GRGCYC	1 cut(s)	118
Eco47I	GGWCC	1 cut(s)	258
Eco57I	CTGAAG	1 cut(s)	807
EcoT14I	CCWWGG	3 cut(s)	261, 493, 681
EcoT38I	GRGCYC	1 cut(s)	118
ErhI	CCWWGG	3 cut(s)	261, 493, 681
FaeI	CATG	8 cut(s)	224, 245, 265, 340, 426, 497, 692, 848
FaqI	GGGAC	1 cut(s)	398
FatI	CATG	8 cut(s)	220, 241, 261, 336, 422, 493, 688, 844
FauI	CCCGC	1 cut(s)	535
FbaI	TGATCA	3 cut(s)	244, 280, 616
Fnu4HI	GCNGC	3 cut(s)	81, 668, 742
FokI	GGATG	2 cut(s)	593, 762
FriOI	GRGCYC	1 cut(s)	118
Fsp4HI	GCNGC	3 cut(s)	81, 668, 742
FspBI	CTAG	4 cut(s)	350, 438, 585, 767
GlaI	GCGC	1 cut(s)	95
GluI	GCNGC	3 cut(s)	81, 668, 742
HaeIII	GGCC	3 cut(s)	5, 492, 744
HapII	CCGG	1 cut(s)	489
HgaI	GACGC	1 cut(s)	149
HhaI	GCGC	1 cut(s)	96
Hin1I	GRCGYC	1 cut(s)	160
Hin1II	CATG	8 cut(s)	224, 245, 265, 340, 426, 497, 692, 848
Hin6I	GCGC	1 cut(s)	94
HinP1I	GCGC	1 cut(s)	94
HincII	GTYRAC	1 cut(s)	517
HindII	GTYRAC	1 cut(s)	517
HindIII	AAGCTT	1 cut(s)	698
HinfI	GANTC	5 cut(s)	43, 209, 232, 359, 374
HpaII	CCGG	1 cut(s)	489
HphI	GGTGA	4 cut(s)	218, 290, 311, 359
Hpy166II	GTNNAC	2 cut(s)	192, 517
Hpy188I	TCNGA	3 cut(s)	402, 430, 750
Hpy188III	TCNNGA	4 cut(s)	242, 284, 383, 508
Hpy8I	GTNNAC	2 cut(s)	192, 517
HpyAV	CCTTC	3 cut(s)	129, 159, 715
HpyCH4III	ACNGT	4 cut(s)	206, 465, 563, 576
HpyCH4V	TGCA	1 cut(s)	634
HpyF10VI	GCNNNNNNNGC	1 cut(s)	841
Hsp92I	GRCGYC	1 cut(s)	160
Hsp92II	CATG	8 cut(s)	224, 245, 265, 340, 426, 497, 692, 848
HspAI	GCGC	1 cut(s)	94
Ksp22I	TGATCA	3 cut(s)	244, 280, 616
KspI	CCGCGG	1 cut(s)	742
Kzo9I	GATC	7 cut(s)	126, 244, 280, 291, 616, 685, 818
LmnI	GCTCC	1 cut(s)	475
Lsp1109I	GCAGC	2 cut(s)	67, 654
LweI	GCATC	2 cut(s)	571, 784
MaeI	CTAG	4 cut(s)	350, 438, 585, 767
MaeIII	GTNAC	5 cut(s)	332, 588, 659, 757, 847
MalI	GATC	7 cut(s)	128, 246, 282, 293, 618, 687, 820
MboI	GATC	7 cut(s)	126, 244, 280, 291, 616, 685, 818
MboII	GAAGA	4 cut(s)	48, 114, 340, 800
MflI	RGATCY	2 cut(s)	291, 818
MhlI	GDGCHC	1 cut(s)	118
MluCI	AATT	4 cut(s)	106, 224, 406, 625
MlyI	GAGTC	1 cut(s)	218
MmeI	TCCRAC	2 cut(s)	380, 479
MnlI	CCTC	5 cut(s)	150, 222, 302, 705, 789
MroXI	GAANNNNTTC	2 cut(s)	52, 378
MseI	TTAA	6 cut(s)	63, 104, 216, 342, 444, 696
MspA1I	CMGCKG	1 cut(s)	741
MspI	CCGG	1 cut(s)	489
Mva1269I	GAATGC	1 cut(s)	634
MvnI	CGCG	1 cut(s)	741
MwoI	GCNNNNNNNGC	1 cut(s)	841
NcoI	CCATGG	2 cut(s)	261, 493
NdeII	GATC	7 cut(s)	126, 244, 280, 291, 616, 685, 818
NlaIII	CATG	8 cut(s)	224, 245, 265, 340, 426, 497, 692, 848
NlaIV	GGNNCC	4 cut(s)	467, 524, 650, 820
NmuCI	GTSAC	3 cut(s)	588, 757, 847
NspI	RCATGY	1 cut(s)	848
PagI	TCATGA	1 cut(s)	241
PctI	GAATGC	1 cut(s)	634
PdmI	GAANNNNTTC	2 cut(s)	52, 378
PfeI	GAWTC	4 cut(s)	43, 232, 359, 374
PflMI	CCANNNNNTGG	1 cut(s)	267
PkrI	GCNGC	3 cut(s)	82, 669, 743
PleI	GAGTC	1 cut(s)	217
PpsI	GAGTC	1 cut(s)	217
PshBI	ATTAAT	1 cut(s)	342
PspN4I	GGNNCC	4 cut(s)	467, 524, 650, 820
PspPI	GGNCC	2 cut(s)	4, 258
PstNI	CAGNNNCTG	1 cut(s)	484
PsuI	RGATCY	2 cut(s)	291, 818
SacII	CCGCGG	1 cut(s)	742
SaqAI	TTAA	6 cut(s)	63, 104, 216, 342, 444, 696
SatI	GCNGC	3 cut(s)	81, 668, 742
Sau3AI	GATC	7 cut(s)	126, 244, 280, 291, 616, 685, 818
Sau96I	GGNCC	2 cut(s)	4, 258
SchI	GAGTC	1 cut(s)	218
SduI	GDGCHC	1 cut(s)	118
SetI	ASST	9 cut(s)	53, 151, 260, 323, 395, 547, 590, 702, 772
SfaNI	GCATC	2 cut(s)	571, 784
Sfr303I	CCGCGG	1 cut(s)	742
SgrBI	CCGCGG	1 cut(s)	742
SinI	GGWCC	1 cut(s)	258
SmlI	CTYRAG	2 cut(s)	388, 709
SmoI	CTYRAG	2 cut(s)	388, 709
SpeI	ACTAGT	1 cut(s)	437
Sse9I	AATT	4 cut(s)	106, 224, 406, 625
SsiI	CCGC	3 cut(s)	528, 739, 741
SspMI	CTAG	4 cut(s)	350, 438, 585, 767
StyI	CCWWGG	3 cut(s)	261, 493, 681
TaaI	ACNGT	4 cut(s)	206, 465, 563, 576
TaqI	TCGA	4 cut(s)	46, 59, 125, 133
TasI	AATT	4 cut(s)	106, 224, 406, 625
TauI	GCSGC	1 cut(s)	744
TfiI	GAWTC	4 cut(s)	43, 232, 359, 374
Tru1I	TTAA	6 cut(s)	63, 104, 216, 342, 444, 696
Tru9I	TTAA	6 cut(s)	63, 104, 216, 342, 444, 696
TscAI	CASTG	4 cut(s)	489, 568, 808, 863
TseFI	GTSAC	3 cut(s)	588, 757, 847
TseI	GCWGC	2 cut(s)	80, 667
Tsp45I	GTSAC	3 cut(s)	588, 757, 847
TspDTI	ATGAA	4 cut(s)	237, 372, 411, 734
TspRI	CASTG	4 cut(s)	489, 568, 808, 863
Van91I	CCANNNNNTGG	1 cut(s)	267
VpaK11BI	GGWCC	1 cut(s)	258
VspI	ATTAAT	1 cut(s)	342
XceI	RCATGY	1 cut(s)	848
XcmI	CCANNNNNNNNNTGG	1 cut(s)	836
XmnI	GAANNNNTTC	2 cut(s)	52, 378
XspI	CTAG	4 cut(s)	350, 438, 585, 767

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.