Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0000356

Physical Location & Seq

Genomic Coordinates Reverse (-)

27997312 .. 27998214

Gene Structure 903 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G022710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 903 bp

ATGGCGTGGAGTTTTGATGATCAAGATTGGATCTCTGGTGATGATGGGGGCACAATCAGGTATTGGAAGAGTAACATGATTAATGTGCTAGTCAATGAATCTGCTCACCATGAATCGGTTCGGGACCTGAGCTTCTGTCGGACTAATTTGAAGTTTTGTTCATGTTCCGATGATACTAGTGTTAAAATCTGGGATTTTGAACGGTGCCAACAGGAGAAGACATTGACCGGCCATGGTTGGAATGTGACGAGTGTCGACTGGCACCCCACAAACTCTCTAATAGCTTCGGGTGGGTGGGACAGTGTTGTCAAACTGTGGGATGCTAGGTCAGGGAGAGAACTCTGTTCTTTTTATGATCACAAAAATTGGGTGCATTCTGTCAAGTGGAACCGAAATGGCAACTGGCTGCTAACTGCTTCCAAGGATCAAGTCATTAAGCTTTACGACTTGAGGGCTATGAAGGAACTTAGATCTTTCCGCGGCCATCAGAACAAAGTGACTGCTCTAGCTTGGCATCCTCTTACCGAAGATTATTTTGTCAGTGGGAGTAGTGATGGATCCATTTTCCATTGGCTTGTTGGGCATCATACTCCCCAGGTTGAAATTCCTAATGCACACACTAACAGTTACAATAATAATACTGTGTGGGATCTCCAGTGGCATCCTATTGGTCATATGATTTGTAGTGGTAGCAATGATCGCACTACCAAGTTTTGGTGCAGAACAGGAGATAAATCTCAAATCACTCAGAATCAAAGTAATTCTGCTTTTGCTTGTCACATGAACAGTAATTTTCCTTTTCCATGTCACGGACCACCAACTATTGCTACTACTCGAGACGAAGGAACCATTGGTTCAGGAGGTGTTGGAACCATTATACCTGGTGTTGGAATTGCGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

WD40

Protein Analysis

300

Amino Acids

33.92

Weight (kDa)

6.45

Isoelectric Point (pI)

28.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	1 - 121	9.1e-19	THOC3 beta-propeller domain
EIF3I	PF24805	2 - 75	5.8e-06	EIF3I
WD40_CDC20-Fz	PF24807	2 - 122	1.1e-12	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	4 - 110	2.7e-17	WDR3 first beta-propeller domain
WD40_MABP1-WDR62_2nd	PF24782	4 - 166	2e-10	MABP1/WDR62 second WD40 domain
Beta-prop_WDR3_2nd	PF25172	6 - 108	1.3e-09	WDR3 second beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	6 - 169	2e-14	TEP-1 second beta-propeller
WD40_Prp19	PF24814	7 - 158	8.5e-24	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	16 - 149	3.7e-29	WDR5 beta-propeller domain
WD40_Gbeta	PF25391	27 - 159	3e-18	G protein beta WD-40 repeat protein
WDR55	PF24796	28 - 154	7.8e-16	WDR55
Beta-prop_Aladin	PF25460	29 - 154	3.4e-06	Aladin seven-bladed propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	30 - 191	9.2e-18	WDR36/Utp21 second beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	35 - 101	2.1e-07	CAF1B/HIR1 beta-propeller domain
WD40_WDHD1_1st	PF24817	37 - 114	1.2e-10	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	48 - 195	7.3e-21	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	51 - 138	3.9e-07	WDR90/POC16, second beta-propeller
Beta-prop_SCAP	PF24017	53 - 152	1.4e-06	SCAP Beta-propeller
Beta-prop_WDR3_1st	PF25173	60 - 191	1.3e-27	WDR3 first beta-propeller domain
WD40	PF00400	70 - 107	4.5e-11	WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1	PF24105	73 - 154	5.9e-11	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	74 - 191	3.6e-13	WDR3 second beta-propeller domain
Beta-prop_EML	PF23409	76 - 181	4.4e-08	Echinoderm microtubule-associated protein first beta-propeller
EIF3I	PF24805	81 - 161	4.2e-09	EIF3I
WD40_MABP1-WDR62_2nd	PF24782	84 - 245	2.1e-07	MABP1/WDR62 second WD40 domain
Beta-prop_WDR36-Utp21_1st	PF25171	101 - 240	3.2e-08	WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st	PF25173	111 - 239	1.2e-17	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	112 - 252	3e-20	CDC20/Fizzy WD40 domain
WD40	PF00400	112 - 149	5.3e-08	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	114 - 243	4.6e-11	WDR3 second beta-propeller domain
Beta-prop_WDR5	PF25175	117 - 202	7.4e-15	WDR5 beta-propeller domain
Beta-prop_DCAF4	PF23761	118 - 177	3.3e-06	DDB1- and CUL4-associated factor 4 beta-propeller domain
Beta-prop_THOC3	PF25174	120 - 252	1.3e-23	THOC3 beta-propeller domain
EIF3I	PF24805	120 - 193	3.7e-06	EIF3I
Beta-prop_Aladin	PF25460	122 - 236	1.3e-06	Aladin seven-bladed propeller
WD40_WDHD1_1st	PF24817	124 - 226	2.3e-12	WDHD1 first WD40 domain
WD40	PF00400	154 - 191	4.9e-06	WD domain, G-beta repeat
WD40_Prp19	PF24814	155 - 254	7.2e-10	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

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Orthologous Genes (Group: OG0000356)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13480 AT5G13480 AT5G13480 AT5G13480
fragaria_vesca	FvH4_4g16141 FvH4_5g25490 FvH4_5g25550 FvH4_6g22190 FvH4_6g23330 FvH4_7g02880
malus_domestica	MD02G1288700.v1.1 MD07G1038200.v1.1
prunus_persica	Prupe.2G034300_v2.0.a1
pyrus_communis	pycom02g24420 pycom07g02650
rosa_chinensis	RchiOBHm_Chr1g0323831 RchiOBHm_Chr3g0482821 RchiOBHm_Chr3g0482981 RchiOBHm_Chr3g0486211 RchiOBHm_Chr4g0404661 RchiOBHm_Chr5g0010661
rosa_laevigata	RLG00000012304 RLG00000017204 RLG00000017697 RLG00000020158 RLG00000030265 RLG00000031770 RLG00000035414
rosa_multiflora	Rmu_co8066382.1_g000001 Rmu_co8299121.1_g000001 Rmu_co8338957.1_g000001 Rmu_sc0001371.1_g000014 Rmu_sc0002634.1_g000006 Rmu_sc0004124.1_g000001 Rmu_sc0004540.1_g000008 Rmu_sc0006103.1_g000005 Rmu_sc0006571.1_g000003 Rmu_sc0006601.1_g000005 Rmu_sc0006601.1_g000008 Rmu_sc0006601.1_g000010 Rmu_sc0009883.1_g000005 Rmu_sc0011602.1_g000010 Rmu_sc0011602.1_g000011 Rmu_sc0012513.1_g000008 Rmu_sc0025336.1_g000001 Rmu_sc0026709.1_g000001 Rmu_ssc0000175.1_g000002 Rmu_ssc0000175.1_g000031
rosa_roxburghii	Rroxscaffold_1G00027770 Rroxscaffold_1G00065710 Rroxscaffold_3G00243370 Rroxscaffold_3G00243410 Rroxscaffold_3G00243440 Rroxscaffold_3G00243490 Rroxscaffold_4G00326390 Rroxscaffold_6G00398770 Rroxscaffold_6G00398910 Rroxscaffold_6G00398940
rosa_rugosa	Rorug01G0039800 Rorug01G0039900 Rorug03G0198000 Rorug03G0198100 Rorug03G0199200 Rorug04G0451600
rosa_samantha	Rh1AG057200 Rh1BG048200 Rh1CG058500 Rh1DG062300 Rh1DG062400 Rh2AG304100 Rh2CG002400 Rh2CG642500 Rh2DG328100 Rh3AG250000 Rh3BG285200 Rh3BG286000 Rh3CG284000 Rh3CG285400 Rh3CG307500 Rh3DG278700 Rh3DG279600 Rh3DG281000 Rh3DG303900 Rh4AG124300 Rh4BG118400 Rh4CG132400 Rh4CG132500 Rh4DG015900 Rh5AG083200 Rh5AG417500 Rh5AG538800 Rh5BG078500 Rh5BG447700 Rh5BG541600 Rh5BG541700 Rh5CG091200 Rh5CG564200 Rh5CG564300 Rh5DG078600 Rh5DG545800
rosa_wichuraiana	Rw0G000660 Rw0G022360 Rw1G004890 Rw3G022520 Rw3G022590 Rw3G022710 Rw3G024280

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	305
AccB1I	GGYRCC	2 cut(s)	204, 261
AccB7I	CCANNNNNTGG	1 cut(s)	714
AccI	GTMKAC	1 cut(s)	255
AccII	CGCG	1 cut(s)	480
AciI	CCGC	3 cut(s)	478, 480, 896
AclWI	GGATC	5 cut(s)	38, 432, 552, 565, 657
AcoI	YGGCCR	2 cut(s)	229, 481
AcsI	RAATTY	1 cut(s)	603
AfiI	CCNNNNNNNGG	4 cut(s)	115, 714, 809, 887
AgsI	TTSAA	3 cut(s)	151, 200, 602
AhlI	ACTAGT	1 cut(s)	176
AjnI	CCWGG	2 cut(s)	594, 880
AjuI	GAANNNNNNNTTGG	2 cut(s)	834, 866
AluBI	AGCT	4 cut(s)	132, 284, 439, 509
AluI	AGCT	4 cut(s)	132, 284, 439, 509
Alw26I	GTCTC	1 cut(s)	831
AlwI	GGATC	5 cut(s)	38, 432, 552, 565, 657
Ama87I	CYCGRG	1 cut(s)	834
AoxI	GGCC	2 cut(s)	229, 481
ApeKI	GCWGC	1 cut(s)	406
ApoI	RAATTY	1 cut(s)	603
AseI	ATTAAT	1 cut(s)	81
Asp700I	GAANNNNTTC	1 cut(s)	117
AspS9I	GGNCC	2 cut(s)	124, 812
AsuHPI	GGTGA	2 cut(s)	50, 98
AvaI	CYCGRG	1 cut(s)	834
AvaII	GGWCC	2 cut(s)	124, 812
BaeGI	GKGCMC	1 cut(s)	53
BaeI	ACNNNNGTAYC	2 cut(s)	165, 198
BamHI	GGATCC	1 cut(s)	557
BanI	GGYRCC	2 cut(s)	204, 261
BbsI	GAAGAC	1 cut(s)	224
BbvI	GCAGC	1 cut(s)	393
BccI	CCATC	3 cut(s)	38, 492, 548
BciT130I	CCWGG	2 cut(s)	596, 882
BclI	TGATCA	2 cut(s)	19, 355
BcoDI	GTCTC	1 cut(s)	831
BcuI	ACTAGT	1 cut(s)	176
BfaI	CTAG	4 cut(s)	89, 177, 324, 506
BglII	AGATCT	1 cut(s)	470
BisI	GCNGC	2 cut(s)	407, 481
BlsI	GCNGC	2 cut(s)	408, 482
Bme1390I	CCNGG	2 cut(s)	596, 882
Bme18I	GGWCC	2 cut(s)	124, 812
BmeT110I	CYCGRG	1 cut(s)	834
BmgT120I	GGNCC	2 cut(s)	124, 812
BmiI	GGNNCC	7 cut(s)	125, 206, 263, 389, 559, 847, 871
BmrFI	CCNGG	2 cut(s)	596, 882
BmsI	GCATC	4 cut(s)	310, 523, 592, 670
BoxI	GACNNNNGTC	1 cut(s)	251
BpiI	GAAGAC	1 cut(s)	224
BpmI	CTGGAG	1 cut(s)	638
Bpu10I	CCTNAGC	1 cut(s)	128
BpuEI	CTTGAG	1 cut(s)	469
BsaJI	CCNNGG	4 cut(s)	232, 420, 478, 594
Bsc4I	CCNNNNNNNGG	4 cut(s)	115, 714, 809, 887
Bse118I	RCCGGY	1 cut(s)	227
Bse1I	ACTGG	3 cut(s)	263, 407, 655
Bse3DI	GCAATG	1 cut(s)	700
BseBI	CCWGG	2 cut(s)	596, 882
BseDI	CCNNGG	4 cut(s)	232, 420, 478, 594
BseGI	GGATG	3 cut(s)	325, 514, 661
BseLI	CCNNNNNNNGG	4 cut(s)	115, 714, 809, 887
BseMI	GCAATG	1 cut(s)	700
BseMII	CTCAG	2 cut(s)	119, 761
BseNI	ACTGG	3 cut(s)	263, 407, 655
BseSI	GKGCMC	1 cut(s)	53
BseXI	GCAGC	1 cut(s)	393
BsgI	GTGCAG	1 cut(s)	739
Bsh1236I	CGCG	1 cut(s)	480
BshFI	GGCC	2 cut(s)	231, 483
BshNI	GGYRCC	2 cut(s)	204, 261
BsiHKCI	CYCGRG	1 cut(s)	834
BsiSI	CCGG	1 cut(s)	228
BslFI	GGGAC	2 cut(s)	137, 311
BslI	CCNNNNNNNGG	4 cut(s)	115, 714, 809, 887
BsmAI	GTCTC	1 cut(s)	831
BsmBI	CGTCTC	1 cut(s)	831
BsmFI	GGGAC	2 cut(s)	137, 311
BsmI	GAATGC	1 cut(s)	373
BsnI	GGCC	2 cut(s)	231, 483
BsoBI	CYCGRG	1 cut(s)	834
Bsp1286I	GDGCHC	1 cut(s)	53
Bsp143I	GATC	8 cut(s)	19, 30, 355, 424, 470, 557, 649, 697
Bsp19I	CCATGG	1 cut(s)	232
BspACI	CCGC	3 cut(s)	478, 480, 896
BspANI	GGCC	2 cut(s)	231, 483
BspCNI	CTCAG	2 cut(s)	120, 760
BspFNI	CGCG	1 cut(s)	480
BspLI	GGNNCC	7 cut(s)	125, 206, 263, 389, 559, 847, 871
BspPI	GGATC	5 cut(s)	38, 432, 552, 565, 657
BspT107I	GGYRCC	2 cut(s)	204, 261
BsrDI	GCAATG	1 cut(s)	700
BsrFI	RCCGGY	1 cut(s)	227
BsrI	ACTGG	3 cut(s)	263, 407, 655
BssAI	RCCGGY	1 cut(s)	227
BssECI	CCNNGG	4 cut(s)	232, 420, 478, 594
BssMI	GATC	8 cut(s)	19, 30, 355, 424, 470, 557, 649, 697
BssT1I	CCWWGG	2 cut(s)	232, 420
Bst2UI	CCWGG	2 cut(s)	596, 882
Bst4CI	ACNGT	6 cut(s)	204, 302, 315, 626, 643, 788
Bst6I	CTCTTC	1 cut(s)	62
BstDEI	CTNAG	3 cut(s)	128, 467, 747
BstDSI	CCRYGG	2 cut(s)	232, 478
BstF5I	GGATG	3 cut(s)	325, 514, 661
BstFNI	CGCG	1 cut(s)	480
BstKTI	GATC	8 cut(s)	22, 33, 358, 427, 473, 560, 652, 700
BstMAI	GTCTC	1 cut(s)	831
BstMBI	GATC	8 cut(s)	19, 30, 355, 424, 470, 557, 649, 697
BstMWI	GCNNNNNNNGC	2 cut(s)	580, 699
BstNI	CCWGG	2 cut(s)	596, 882
BstPAI	GACNNNNGTC	1 cut(s)	251
BstSCI	CCNGG	2 cut(s)	594, 880
BstSLI	GKGCMC	1 cut(s)	53
BstUI	CGCG	1 cut(s)	480
BstV1I	GCAGC	1 cut(s)	393
BstV2I	GAAGAC	1 cut(s)	224
BstX2I	RGATCY	4 cut(s)	30, 470, 557, 649
BstYI	RGATCY	4 cut(s)	30, 470, 557, 649
BsuRI	GGCC	2 cut(s)	231, 483
BtgI	CCRYGG	2 cut(s)	232, 478
BtsCI	GGATG	3 cut(s)	325, 514, 661
BtsIMutI	CAGTG	3 cut(s)	307, 547, 662
Cfr10I	RCCGGY	1 cut(s)	227
Cfr13I	GGNCC	2 cut(s)	124, 812
Cfr42I	CCGCGG	1 cut(s)	481
CsiI	ACCWGGT	1 cut(s)	880
CviAII	CATG	6 cut(s)	76, 110, 162, 233, 781, 804
CviJI	RGCY	9 cut(s)	132, 231, 284, 406, 439, 455, 483, 509, 574
CviKI_1	RGCY	9 cut(s)	132, 231, 284, 406, 439, 455, 483, 509, 574
DdeI	CTNAG	3 cut(s)	128, 467, 747
DpnI	GATC	8 cut(s)	21, 32, 357, 426, 472, 559, 651, 699
DpnII	GATC	8 cut(s)	19, 30, 355, 424, 470, 557, 649, 697
DrdI	GACNNNNNNGTC	1 cut(s)	305
DseDI	GACNNNNNNGTC	1 cut(s)	305
EaeI	YGGCCR	2 cut(s)	229, 481
Eam1104I	CTCTTC	1 cut(s)	62
EarI	CTCTTC	1 cut(s)	62
Eco130I	CCWWGG	2 cut(s)	232, 420
Eco47I	GGWCC	2 cut(s)	124, 812
Eco88I	CYCGRG	1 cut(s)	834
EcoO109I	RGGNCCY	1 cut(s)	124
EcoRII	CCWGG	2 cut(s)	594, 880
EcoT14I	CCWWGG	2 cut(s)	232, 420
ErhI	CCWWGG	2 cut(s)	232, 420
Esp3I	CGTCTC	1 cut(s)	831
FaeI	CATG	6 cut(s)	79, 113, 165, 236, 784, 807
FaqI	GGGAC	2 cut(s)	137, 311
FatI	CATG	6 cut(s)	75, 109, 161, 232, 780, 803
FauNDI	CATATG	1 cut(s)	675
FbaI	TGATCA	2 cut(s)	19, 355
FblI	GTMKAC	1 cut(s)	255
Fnu4HI	GCNGC	2 cut(s)	407, 481
FokI	GGATG	3 cut(s)	332, 501, 648
Fsp4HI	GCNGC	2 cut(s)	407, 481
FspBI	CTAG	4 cut(s)	89, 177, 324, 506
GluI	GCNGC	2 cut(s)	407, 481
GsuI	CTGGAG	1 cut(s)	638
HaeIII	GGCC	2 cut(s)	231, 483
HapII	CCGG	1 cut(s)	228
Hin1II	CATG	6 cut(s)	79, 113, 165, 236, 784, 807
HincII	GTYRAC	1 cut(s)	256
HindII	GTYRAC	1 cut(s)	256
HindIII	AAGCTT	1 cut(s)	437
HinfI	GANTC	3 cut(s)	98, 113, 751
HpaII	CCGG	1 cut(s)	228
HphI	GGTGA	2 cut(s)	50, 98
Hpy166II	GTNNAC	1 cut(s)	256
Hpy188I	TCNGA	4 cut(s)	141, 169, 489, 750
Hpy188III	TCNNGA	4 cut(s)	23, 122, 836, 858
Hpy8I	GTNNAC	1 cut(s)	256
HpyAV	CCTTC	2 cut(s)	454, 836
HpyCH4III	ACNGT	6 cut(s)	204, 302, 315, 626, 643, 788
HpyCH4V	TGCA	3 cut(s)	373, 614, 720
HpyF10VI	GCNNNNNNNGC	2 cut(s)	580, 699
HpyF3I	CTNAG	3 cut(s)	128, 467, 747
Hsp92II	CATG	6 cut(s)	79, 113, 165, 236, 784, 807
Ksp22I	TGATCA	2 cut(s)	19, 355
KspI	CCGCGG	1 cut(s)	481
Kzo9I	GATC	8 cut(s)	19, 30, 355, 424, 470, 557, 649, 697
Lsp1109I	GCAGC	1 cut(s)	393
LweI	GCATC	4 cut(s)	310, 523, 592, 670
MabI	ACCWGGT	1 cut(s)	880
MaeI	CTAG	4 cut(s)	89, 177, 324, 506
MaeIII	GTNAC	6 cut(s)	71, 244, 496, 626, 776, 806
MalI	GATC	8 cut(s)	21, 32, 357, 426, 472, 559, 651, 699
MboI	GATC	8 cut(s)	19, 30, 355, 424, 470, 557, 649, 697
MboII	GAAGA	3 cut(s)	79, 229, 539
MflI	RGATCY	4 cut(s)	30, 470, 557, 649
MhlI	GDGCHC	1 cut(s)	53
MluCI	AATT	6 cut(s)	145, 364, 603, 760, 790, 891
MmeI	TCCRAC	4 cut(s)	119, 218, 847, 868
MnlI	CCTC	3 cut(s)	444, 528, 854
MroXI	GAANNNNTTC	1 cut(s)	117
MseI	TTAA	4 cut(s)	81, 183, 435, 901
MspA1I	CMGCKG	1 cut(s)	480
MspI	CCGG	1 cut(s)	228
MspR9I	CCNGG	2 cut(s)	596, 882
Mva1269I	GAATGC	1 cut(s)	373
MvaI	CCWGG	2 cut(s)	596, 882
MvnI	CGCG	1 cut(s)	480
MwoI	GCNNNNNNNGC	2 cut(s)	580, 699
NcoI	CCATGG	1 cut(s)	232
NdeI	CATATG	1 cut(s)	675
NdeII	GATC	8 cut(s)	19, 30, 355, 424, 470, 557, 649, 697
NlaIII	CATG	6 cut(s)	79, 113, 165, 236, 784, 807
NlaIV	GGNNCC	7 cut(s)	125, 206, 263, 389, 559, 847, 871
NmuCI	GTSAC	4 cut(s)	244, 496, 776, 806
PaeR7I	CTCGAG	1 cut(s)	834
PctI	GAATGC	1 cut(s)	373
PdmI	GAANNNNTTC	1 cut(s)	117
PfeI	GAWTC	3 cut(s)	98, 113, 751
PflMI	CCANNNNNTGG	1 cut(s)	714
PkrI	GCNGC	2 cut(s)	408, 482
PpuMI	RGGWCCY	1 cut(s)	124
PshAI	GACNNNNGTC	1 cut(s)	251
PshBI	ATTAAT	1 cut(s)	81
Psp5II	RGGWCCY	1 cut(s)	124
Psp6I	CCWGG	2 cut(s)	594, 880
PspGI	CCWGG	2 cut(s)	594, 880
PspN4I	GGNNCC	7 cut(s)	125, 206, 263, 389, 559, 847, 871
PspPI	GGNCC	2 cut(s)	124, 812
PspPPI	RGGWCCY	1 cut(s)	124
PsuI	RGATCY	4 cut(s)	30, 470, 557, 649
SacII	CCGCGG	1 cut(s)	481
SalI	GTCGAC	1 cut(s)	254
SaqAI	TTAA	4 cut(s)	81, 183, 435, 901
SatI	GCNGC	2 cut(s)	407, 481
Sau3AI	GATC	8 cut(s)	19, 30, 355, 424, 470, 557, 649, 697
Sau96I	GGNCC	2 cut(s)	124, 812
ScrFI	CCNGG	2 cut(s)	596, 882
SduI	GDGCHC	1 cut(s)	53
SexAI	ACCWGGT	1 cut(s)	880
SfaNI	GCATC	4 cut(s)	310, 523, 592, 670
Sfr274I	CTCGAG	1 cut(s)	834
Sfr303I	CCGCGG	1 cut(s)	481
SgrBI	CCGCGG	1 cut(s)	481
SinI	GGWCC	2 cut(s)	124, 812
SlaI	CTCGAG	1 cut(s)	834
SmlI	CTYRAG	2 cut(s)	448, 834
SmoI	CTYRAG	2 cut(s)	448, 834
SpeI	ACTAGT	1 cut(s)	176
Sse9I	AATT	6 cut(s)	145, 364, 603, 760, 790, 891
SsiI	CCGC	3 cut(s)	478, 480, 896
SspMI	CTAG	4 cut(s)	89, 177, 324, 506
StyD4I	CCNGG	2 cut(s)	594, 880
StyI	CCWWGG	2 cut(s)	232, 420
TaaI	ACNGT	6 cut(s)	204, 302, 315, 626, 643, 788
TaqI	TCGA	2 cut(s)	255, 835
TasI	AATT	6 cut(s)	145, 364, 603, 760, 790, 891
TauI	GCSGC	1 cut(s)	483
TfiI	GAWTC	3 cut(s)	98, 113, 751
Tru1I	TTAA	4 cut(s)	81, 183, 435, 901
Tru9I	TTAA	4 cut(s)	81, 183, 435, 901
TscAI	CASTG	3 cut(s)	307, 547, 662
TseFI	GTSAC	4 cut(s)	244, 496, 776, 806
TseI	GCWGC	1 cut(s)	406
Tsp45I	GTSAC	4 cut(s)	244, 496, 776, 806
TspDTI	ATGAA	5 cut(s)	111, 126, 150, 473, 797
TspGWI	ACGGA	1 cut(s)	825
TspRI	CASTG	3 cut(s)	307, 547, 662
Van91I	CCANNNNNTGG	1 cut(s)	714
VpaK11BI	GGWCC	2 cut(s)	124, 812
VspI	ATTAAT	1 cut(s)	81
XapI	RAATTY	1 cut(s)	603
XcmI	CCANNNNNNNNNTGG	1 cut(s)	575
XhoI	CTCGAG	1 cut(s)	834
XmiI	GTMKAC	1 cut(s)	255
XmnI	GAANNNNTTC	1 cut(s)	117
XspI	CTAG	4 cut(s)	89, 177, 324, 506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.