Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0000356

Physical Location & Seq

Genomic Coordinates Forward (+)

26934327 .. 26935843

Gene Structure 1517 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG250000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGGCCCATCACCACCACCCCTACGCCTGTTCTTCGATTAACAACAACCCATTTGCTGCCCAGTTTGTGCGCTCTTGCACAAATTACAGAGCCCCTTCTTCGATCAATCGAGTTTTATGGACACCTTCTGGGAGGCGTCTTATTACAGGCTCTCAAAACGGGGAGTTCACTCTCTGGAATGGTGAGTCATTCAAACATGAATTGAGGATTCAGGCTCATGATCATGCAATCAGGTCCATGGCGTGGAGTTTTGATGATCAAGATTGGATCTCTGGTGATGATGGAGGCACAATCAGGTATTGGAAGAGTAACATGATTAATGTGCTAGTCAATGAATCTGCTCACCATGAATCGGTTCGGGACCTGAGCTTCTGTCGGACTAATTTGAAGTTTTGTTCATGTTCCGATGATACTAGTGTTAAAATCTGGGATTTTGAACGGTGCCAACAGGAGAAGACATTGACCGGCCATGGTTGGAATGTGACGAGCGTTGACTGGCACCCCACAAACTCTTTAATAGCTTCGGGTGGGTGGGACAGTGTTGTCAAACTGTGGGATGCTAGGTCAGGGAGAGAACTCTGTTCTTTTTATGATCACAAAAATTGGGTGCATTCTGTCAAGTGGAACCGAAATGGTAACTGGCTGCTGACTGCTTCCAAGGATCAAGTCATTAAGCTTTACGACTTGAGGGCTATGAAGGAACTTAGATCTTTCCGCGGCCATCAGAACAAAGTGACTGCTCTAGCTTGGCATCCTCTTACTGAAGATTATTTTGTCAGTGGGAGTAGTGATGGATCCATTTTCCATTGGCTTGTTGGGCATCATACTCCCCAGGTTGAAATTCCTAATGCACACACTAGCAGTTACAATAATAATAGTGTGTGGGATCTCCAGTGGCATCCTATTGGTCATATGATTTGTAGTGGTAGCAATGATCGCACTACCAAGTTTTGGTGCAGAACAGGAGATAAATCTCAAATCACTCAGAATCAAAGTAATTCTGCTTTTGCTTGTCACATGAACAGTAATTTTCCTTTTCCATGTCACGGACCACCAACTATTGCTACTACTCGAGACGAAGGAACCATTGGTTCAGGAGGTGTTGGAACCATTATACCTGGTGTTGGAATTGCGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

WD40

Protein Analysis

379

Amino Acids

42.89

Weight (kDa)

7.35

Isoelectric Point (pI)

35.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	24 - 193	5e-21	CDC20/Fizzy WD40 domain
Beta-prop_IFT140_1st	PF23383	32 - 118	2.4e-09	IFT140 first beta-propeller
Beta-prop_WDR3_1st	PF25173	32 - 179	1.4e-20	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	33 - 103	2.8e-07	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	34 - 123	4.5e-08	WDR5 beta-propeller domain
Beta-prop_EIPR1	PF23609	35 - 185	5.8e-07	EIPR1 beta-propeller
WD40_Gbeta	PF25391	35 - 238	1.9e-19	G protein beta WD-40 repeat protein
WD40_Prp19	PF24814	41 - 237	1.2e-29	Prp19 WD40 domain
EIF3I	PF24805	66 - 154	3.8e-08	EIF3I
Beta-prop_CAF1B_HIR1	PF24105	75 - 182	1.8e-07	CAF1B/HIR1 beta-propeller domain
WD40_MABP1-WDR62_2nd	PF24782	76 - 244	8.7e-12	MABP1/WDR62 second WD40 domain
Beta-prop_TEP1_2nd	PF25047	80 - 248	1.1e-13	TEP-1 second beta-propeller
WDR55	PF24796	107 - 272	1.4e-17	WDR55
Beta-prop_Aladin	PF25460	110 - 233	6.3e-06	Aladin seven-bladed propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	111 - 269	3.6e-17	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR5	PF25175	113 - 229	1.1e-27	WDR5 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	114 - 187	3.1e-09	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	115 - 193	7e-17	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	117 - 193	2.4e-10	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	127 - 273	1.4e-20	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	130 - 219	2.2e-07	WDR90/POC16, second beta-propeller
EIF3I	PF24805	133 - 318	4.3e-13	EIF3I
Beta-prop_WDR3_1st	PF25173	149 - 318	4.7e-26	WDR3 first beta-propeller domain
WD40	PF00400	149 - 186	6.3e-11	WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1	PF24105	152 - 233	9e-11	CAF1B/HIR1 beta-propeller domain
Beta-prop_EML	PF23409	155 - 260	5.2e-08	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR3_2nd	PF25172	160 - 322	1.4e-13	WDR3 second beta-propeller domain
WD40_MABP1-WDR62_2nd	PF24782	163 - 322	1.1e-06	MABP1/WDR62 second WD40 domain
Beta-prop_WDR36-Utp21_1st	PF25171	180 - 319	3e-08	WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz	PF24807	182 - 331	4.6e-21	CDC20/Fizzy WD40 domain
WD40	PF00400	191 - 228	7.4e-08	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	196 - 279	1.1e-14	WDR5 beta-propeller domain
Beta-prop_DCAF4	PF23761	198 - 258	4.1e-06	DDB1- and CUL4-associated factor 4 beta-propeller domain
Beta-prop_THOC3	PF25174	199 - 331	3e-24	THOC3 beta-propeller domain
Beta-prop_Aladin	PF25460	202 - 314	3e-06	Aladin seven-bladed propeller
WD40_WDHD1_1st	PF24817	203 - 306	3.1e-12	WDHD1 first WD40 domain
WD40	PF00400	233 - 270	6.8e-06	WD domain, G-beta repeat
WD40_Prp19	PF24814	235 - 333	9.7e-10	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000356)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13480 AT5G13480 AT5G13480 AT5G13480
fragaria_vesca	FvH4_4g16141 FvH4_5g25490 FvH4_5g25550 FvH4_6g22190 FvH4_6g23330 FvH4_7g02880
malus_domestica	MD02G1288700.v1.1 MD07G1038200.v1.1
prunus_persica	Prupe.2G034300_v2.0.a1
pyrus_communis	pycom02g24420 pycom07g02650
rosa_chinensis	RchiOBHm_Chr1g0323831 RchiOBHm_Chr3g0482821 RchiOBHm_Chr3g0482981 RchiOBHm_Chr3g0486211 RchiOBHm_Chr4g0404661 RchiOBHm_Chr5g0010661
rosa_laevigata	RLG00000012304 RLG00000017204 RLG00000017697 RLG00000020158 RLG00000030265 RLG00000031770 RLG00000035414
rosa_multiflora	Rmu_co8066382.1_g000001 Rmu_co8299121.1_g000001 Rmu_co8338957.1_g000001 Rmu_sc0001371.1_g000014 Rmu_sc0002634.1_g000006 Rmu_sc0004124.1_g000001 Rmu_sc0004540.1_g000008 Rmu_sc0006103.1_g000005 Rmu_sc0006571.1_g000003 Rmu_sc0006601.1_g000005 Rmu_sc0006601.1_g000008 Rmu_sc0006601.1_g000010 Rmu_sc0009883.1_g000005 Rmu_sc0011602.1_g000010 Rmu_sc0011602.1_g000011 Rmu_sc0012513.1_g000008 Rmu_sc0025336.1_g000001 Rmu_sc0026709.1_g000001 Rmu_ssc0000175.1_g000002 Rmu_ssc0000175.1_g000031
rosa_roxburghii	Rroxscaffold_1G00027770 Rroxscaffold_1G00065710 Rroxscaffold_3G00243370 Rroxscaffold_3G00243410 Rroxscaffold_3G00243440 Rroxscaffold_3G00243490 Rroxscaffold_4G00326390 Rroxscaffold_6G00398770 Rroxscaffold_6G00398910 Rroxscaffold_6G00398940
rosa_rugosa	Rorug01G0039800 Rorug01G0039900 Rorug03G0198000 Rorug03G0198100 Rorug03G0199200 Rorug04G0451600
rosa_samantha	Rh1AG057200 Rh1BG048200 Rh1CG058500 Rh1DG062300 Rh1DG062400 Rh2AG304100 Rh2CG002400 Rh2CG642500 Rh2DG328100 Rh3AG250000 Rh3BG285200 Rh3BG286000 Rh3CG284000 Rh3CG285400 Rh3CG307500 Rh3DG278700 Rh3DG279600 Rh3DG281000 Rh3DG303900 Rh4AG124300 Rh4BG118400 Rh4CG132400 Rh4CG132500 Rh4DG015900 Rh5AG083200 Rh5AG417500 Rh5AG538800 Rh5BG078500 Rh5BG447700 Rh5BG541600 Rh5BG541700 Rh5CG091200 Rh5CG564200 Rh5CG564300 Rh5DG078600 Rh5DG545800
rosa_wichuraiana	Rw0G000660 Rw0G022360 Rw1G004890 Rw3G022520 Rw3G022590 Rw3G022710 Rw3G024280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	542
AccB1I	GGYRCC	2 cut(s)	441, 498
AccB7I	CCANNNNNTGG	2 cut(s)	243, 951
AccII	CGCG	1 cut(s)	717
AciI	CCGC	3 cut(s)	715, 717, 1133
AclWI	GGATC	5 cut(s)	275, 669, 789, 802, 894
AcoI	YGGCCR	2 cut(s)	466, 718
AcsI	RAATTY	1 cut(s)	840
AcuI	CTGAAG	1 cut(s)	783
AcyI	GRCGYC	1 cut(s)	136
AfiI	CCNNNNNNNGG	5 cut(s)	243, 352, 951, 1046, 1124
AgsI	TTSAA	4 cut(s)	193, 388, 437, 839
AhlI	ACTAGT	1 cut(s)	413
AjnI	CCWGG	2 cut(s)	831, 1117
AjuI	GAANNNNNNNTTGG	2 cut(s)	1071, 1103
AluBI	AGCT	4 cut(s)	369, 521, 676, 746
AluI	AGCT	4 cut(s)	369, 521, 676, 746
Alw26I	GTCTC	1 cut(s)	1068
AlwI	GGATC	5 cut(s)	275, 669, 789, 802, 894
Ama87I	CYCGRG	1 cut(s)	1071
AoxI	GGCC	3 cut(s)	3, 466, 718
ApeKI	GCWGC	2 cut(s)	56, 643
ApoI	RAATTY	1 cut(s)	840
AseI	ATTAAT	1 cut(s)	318
Asp700I	GAANNNNTTC	1 cut(s)	354
AspLEI	GCGC	1 cut(s)	72
AspS9I	GGNCC	4 cut(s)	4, 234, 361, 1049
AsuHPI	GGTGA	3 cut(s)	194, 287, 335
AvaI	CYCGRG	1 cut(s)	1071
AvaII	GGWCC	3 cut(s)	234, 361, 1049
BaeI	ACNNNNGTAYC	2 cut(s)	402, 435
BamHI	GGATCC	1 cut(s)	794
BanI	GGYRCC	2 cut(s)	441, 498
BanII	GRGCYC	1 cut(s)	94
BbsI	GAAGAC	1 cut(s)	461
BbvI	GCAGC	2 cut(s)	43, 630
BccI	CCATC	4 cut(s)	15, 275, 729, 785
BciT130I	CCWGG	2 cut(s)	833, 1119
BclI	TGATCA	3 cut(s)	220, 256, 592
BcoDI	GTCTC	1 cut(s)	1068
BcuI	ACTAGT	1 cut(s)	413
BfaI	CTAG	5 cut(s)	326, 414, 561, 743, 858
BglII	AGATCT	1 cut(s)	707
BisI	GCNGC	3 cut(s)	57, 644, 718
BlsI	GCNGC	3 cut(s)	58, 645, 719
Bme1390I	CCNGG	2 cut(s)	833, 1119
Bme18I	GGWCC	3 cut(s)	234, 361, 1049
BmeT110I	CYCGRG	1 cut(s)	1071
BmgT120I	GGNCC	4 cut(s)	4, 234, 361, 1049
BmiI	GGNNCC	7 cut(s)	362, 443, 500, 626, 796, 1084, 1108
BmrFI	CCNGG	2 cut(s)	833, 1119
BmrI	ACTGGG	1 cut(s)	55
BmsI	GCATC	4 cut(s)	547, 760, 829, 907
BmuI	ACTGGG	1 cut(s)	55
BpiI	GAAGAC	1 cut(s)	461
BpmI	CTGGAG	1 cut(s)	875
Bpu10I	CCTNAGC	1 cut(s)	365
BpuEI	CTTGAG	1 cut(s)	706
BsaHI	GRCGYC	1 cut(s)	136
BsaJI	CCNNGG	5 cut(s)	237, 469, 657, 715, 831
Bsc4I	CCNNNNNNNGG	5 cut(s)	243, 352, 951, 1046, 1124
Bse118I	RCCGGY	1 cut(s)	464
Bse1I	ACTGG	4 cut(s)	61, 500, 644, 892
Bse3DI	GCAATG	1 cut(s)	937
BseBI	CCWGG	2 cut(s)	833, 1119
BseDI	CCNNGG	5 cut(s)	237, 469, 657, 715, 831
BseGI	GGATG	3 cut(s)	562, 751, 898
BseLI	CCNNNNNNNGG	5 cut(s)	243, 352, 951, 1046, 1124
BseMI	GCAATG	1 cut(s)	937
BseMII	CTCAG	2 cut(s)	356, 998
BseNI	ACTGG	4 cut(s)	61, 500, 644, 892
BseXI	GCAGC	2 cut(s)	43, 630
BsgI	GTGCAG	1 cut(s)	976
Bsh1236I	CGCG	1 cut(s)	717
BshFI	GGCC	3 cut(s)	5, 468, 720
BshNI	GGYRCC	2 cut(s)	441, 498
BsiHKCI	CYCGRG	1 cut(s)	1071
BsiSI	CCGG	1 cut(s)	465
BslFI	GGGAC	2 cut(s)	374, 548
BslI	CCNNNNNNNGG	5 cut(s)	243, 352, 951, 1046, 1124
BsmAI	GTCTC	1 cut(s)	1068
BsmBI	CGTCTC	1 cut(s)	1068
BsmFI	GGGAC	2 cut(s)	374, 548
BsmI	GAATGC	1 cut(s)	610
BsnI	GGCC	3 cut(s)	5, 468, 720
BsoBI	CYCGRG	1 cut(s)	1071
Bsp1286I	GDGCHC	1 cut(s)	94
Bsp19I	CCATGG	2 cut(s)	237, 469
BspACI	CCGC	3 cut(s)	715, 717, 1133
BspANI	GGCC	3 cut(s)	5, 468, 720
BspCNI	CTCAG	2 cut(s)	357, 997
BspFNI	CGCG	1 cut(s)	717
BspHI	TCATGA	1 cut(s)	217
BspLI	GGNNCC	7 cut(s)	362, 443, 500, 626, 796, 1084, 1108
BspPI	GGATC	5 cut(s)	275, 669, 789, 802, 894
BspT107I	GGYRCC	2 cut(s)	441, 498
BsrDI	GCAATG	1 cut(s)	937
BsrFI	RCCGGY	1 cut(s)	464
BsrI	ACTGG	4 cut(s)	61, 500, 644, 892
BssAI	RCCGGY	1 cut(s)	464
BssECI	CCNNGG	5 cut(s)	237, 469, 657, 715, 831
BssNI	GRCGYC	1 cut(s)	136
BssT1I	CCWWGG	3 cut(s)	237, 469, 657
Bst2UI	CCWGG	2 cut(s)	833, 1119
Bst4CI	ACNGT	4 cut(s)	441, 539, 552, 1025
Bst6I	CTCTTC	1 cut(s)	299
BstACI	GRCGYC	1 cut(s)	136
BstDEI	CTNAG	3 cut(s)	365, 704, 984
BstDSI	CCRYGG	3 cut(s)	237, 469, 715
BstF5I	GGATG	3 cut(s)	562, 751, 898
BstFNI	CGCG	1 cut(s)	717
BstHHI	GCGC	1 cut(s)	72
BstMAI	GTCTC	1 cut(s)	1068
BstMWI	GCNNNNNNNGC	2 cut(s)	817, 936
BstNI	CCWGG	2 cut(s)	833, 1119
BstSCI	CCNGG	2 cut(s)	831, 1117
BstUI	CGCG	1 cut(s)	717
BstV1I	GCAGC	2 cut(s)	43, 630
BstV2I	GAAGAC	1 cut(s)	461
BstX2I	RGATCY	4 cut(s)	267, 707, 794, 886
BstYI	RGATCY	4 cut(s)	267, 707, 794, 886
BsuRI	GGCC	3 cut(s)	5, 468, 720
BtgI	CCRYGG	3 cut(s)	237, 469, 715
BtsCI	GGATG	3 cut(s)	562, 751, 898
BtsIMutI	CAGTG	3 cut(s)	544, 784, 899
CciI	TCATGA	1 cut(s)	217
CfoI	GCGC	1 cut(s)	72
Cfr10I	RCCGGY	1 cut(s)	464
Cfr13I	GGNCC	4 cut(s)	4, 234, 361, 1049
Cfr42I	CCGCGG	1 cut(s)	718
CseI	GACGC	1 cut(s)	125
CsiI	ACCWGGT	1 cut(s)	1117
DdeI	CTNAG	3 cut(s)	365, 704, 984
DrdI	GACNNNNNNGTC	1 cut(s)	542
DseDI	GACNNNNNNGTC	1 cut(s)	542
EaeI	YGGCCR	2 cut(s)	466, 718
Eam1104I	CTCTTC	1 cut(s)	299
EarI	CTCTTC	1 cut(s)	299
Eco130I	CCWWGG	3 cut(s)	237, 469, 657
Eco24I	GRGCYC	1 cut(s)	94
Eco47I	GGWCC	3 cut(s)	234, 361, 1049
Eco57I	CTGAAG	1 cut(s)	783
Eco88I	CYCGRG	1 cut(s)	1071
EcoO109I	RGGNCCY	1 cut(s)	361
EcoRII	CCWGG	2 cut(s)	831, 1117
EcoT14I	CCWWGG	3 cut(s)	237, 469, 657
EcoT38I	GRGCYC	1 cut(s)	94
ErhI	CCWWGG	3 cut(s)	237, 469, 657
Esp3I	CGTCTC	1 cut(s)	1068
FaqI	GGGAC	2 cut(s)	374, 548
FauNDI	CATATG	1 cut(s)	912
FbaI	TGATCA	3 cut(s)	220, 256, 592
Fnu4HI	GCNGC	3 cut(s)	57, 644, 718
FokI	GGATG	3 cut(s)	569, 738, 885
FriOI	GRGCYC	1 cut(s)	94
Fsp4HI	GCNGC	3 cut(s)	57, 644, 718
FspBI	CTAG	5 cut(s)	326, 414, 561, 743, 858
GlaI	GCGC	1 cut(s)	71
GluI	GCNGC	3 cut(s)	57, 644, 718
GsuI	CTGGAG	1 cut(s)	875
HaeIII	GGCC	3 cut(s)	5, 468, 720
HapII	CCGG	1 cut(s)	465
HgaI	GACGC	1 cut(s)	125
HhaI	GCGC	1 cut(s)	72
Hin1I	GRCGYC	1 cut(s)	136
Hin6I	GCGC	1 cut(s)	70
HinP1I	GCGC	1 cut(s)	70
HincII	GTYRAC	1 cut(s)	493
HindII	GTYRAC	1 cut(s)	493
HindIII	AAGCTT	1 cut(s)	674
HinfI	GANTC	5 cut(s)	185, 208, 335, 350, 988
HpaII	CCGG	1 cut(s)	465
HphI	GGTGA	3 cut(s)	194, 287, 335
Hpy166II	GTNNAC	2 cut(s)	168, 493
Hpy188I	TCNGA	4 cut(s)	378, 406, 726, 987
Hpy188III	TCNNGA	6 cut(s)	175, 218, 260, 359, 1073, 1095
Hpy8I	GTNNAC	2 cut(s)	168, 493
HpyAV	CCTTC	4 cut(s)	105, 135, 691, 1073
HpyCH4III	ACNGT	4 cut(s)	441, 539, 552, 1025
HpyCH4V	TGCA	5 cut(s)	78, 227, 610, 851, 957
HpyF10VI	GCNNNNNNNGC	2 cut(s)	817, 936
HpyF3I	CTNAG	3 cut(s)	365, 704, 984
Hsp92I	GRCGYC	1 cut(s)	136
HspAI	GCGC	1 cut(s)	70
Ksp22I	TGATCA	3 cut(s)	220, 256, 592
KspI	CCGCGG	1 cut(s)	718
Lsp1109I	GCAGC	2 cut(s)	43, 630
LweI	GCATC	4 cut(s)	547, 760, 829, 907
MabI	ACCWGGT	1 cut(s)	1117
MaeI	CTAG	5 cut(s)	326, 414, 561, 743, 858
MaeIII	GTNAC	7 cut(s)	308, 481, 635, 733, 863, 1013, 1043
MboII	GAAGA	5 cut(s)	24, 90, 316, 466, 776
MflI	RGATCY	4 cut(s)	267, 707, 794, 886
MhlI	GDGCHC	1 cut(s)	94
MluCI	AATT	8 cut(s)	82, 200, 382, 601, 840, 997, 1027, 1128
MlyI	GAGTC	1 cut(s)	194
MmeI	TCCRAC	4 cut(s)	356, 455, 1084, 1105
MnlI	CCTC	6 cut(s)	126, 198, 278, 681, 765, 1091
MroXI	GAANNNNTTC	1 cut(s)	354
MseI	TTAA	6 cut(s)	39, 318, 420, 515, 672, 1138
MslI	CAYNNNNRTG	1 cut(s)	222
MspA1I	CMGCKG	1 cut(s)	717
MspI	CCGG	1 cut(s)	465
MspR9I	CCNGG	2 cut(s)	833, 1119
Mva1269I	GAATGC	1 cut(s)	610
MvaI	CCWGG	2 cut(s)	833, 1119
MvnI	CGCG	1 cut(s)	717
MwoI	GCNNNNNNNGC	2 cut(s)	817, 936
NcoI	CCATGG	2 cut(s)	237, 469
NdeI	CATATG	1 cut(s)	912
NlaIV	GGNNCC	7 cut(s)	362, 443, 500, 626, 796, 1084, 1108
NmuCI	GTSAC	4 cut(s)	481, 733, 1013, 1043
PaeR7I	CTCGAG	1 cut(s)	1071
PagI	TCATGA	1 cut(s)	217
PctI	GAATGC	1 cut(s)	610
PdmI	GAANNNNTTC	1 cut(s)	354
PfeI	GAWTC	4 cut(s)	208, 335, 350, 988
PflMI	CCANNNNNTGG	2 cut(s)	243, 951
PkrI	GCNGC	3 cut(s)	58, 645, 719
PleI	GAGTC	1 cut(s)	193
PpsI	GAGTC	1 cut(s)	193
PpuMI	RGGWCCY	1 cut(s)	361
PshBI	ATTAAT	1 cut(s)	318
Psp5II	RGGWCCY	1 cut(s)	361
Psp6I	CCWGG	2 cut(s)	831, 1117
PspGI	CCWGG	2 cut(s)	831, 1117
PspN4I	GGNNCC	7 cut(s)	362, 443, 500, 626, 796, 1084, 1108
PspPI	GGNCC	4 cut(s)	4, 234, 361, 1049
PspPPI	RGGWCCY	1 cut(s)	361
PsuI	RGATCY	4 cut(s)	267, 707, 794, 886
RseI	CAYNNNNRTG	1 cut(s)	222
SacII	CCGCGG	1 cut(s)	718
SaqAI	TTAA	6 cut(s)	39, 318, 420, 515, 672, 1138
SatI	GCNGC	3 cut(s)	57, 644, 718
Sau96I	GGNCC	4 cut(s)	4, 234, 361, 1049
SchI	GAGTC	1 cut(s)	194
ScrFI	CCNGG	2 cut(s)	833, 1119
SduI	GDGCHC	1 cut(s)	94
SexAI	ACCWGGT	1 cut(s)	1117
SfaNI	GCATC	4 cut(s)	547, 760, 829, 907
Sfr274I	CTCGAG	1 cut(s)	1071
Sfr303I	CCGCGG	1 cut(s)	718
SgrBI	CCGCGG	1 cut(s)	718
SinI	GGWCC	3 cut(s)	234, 361, 1049
SlaI	CTCGAG	1 cut(s)	1071
SmiMI	CAYNNNNRTG	1 cut(s)	222
SmlI	CTYRAG	2 cut(s)	685, 1071
SmoI	CTYRAG	2 cut(s)	685, 1071
SpeI	ACTAGT	1 cut(s)	413
Sse9I	AATT	8 cut(s)	82, 200, 382, 601, 840, 997, 1027, 1128
SsiI	CCGC	3 cut(s)	715, 717, 1133
SspMI	CTAG	5 cut(s)	326, 414, 561, 743, 858
StyD4I	CCNGG	2 cut(s)	831, 1117
StyI	CCWWGG	3 cut(s)	237, 469, 657
TaaI	ACNGT	4 cut(s)	441, 539, 552, 1025
TaqI	TCGA	4 cut(s)	35, 101, 109, 1072
TasI	AATT	8 cut(s)	82, 200, 382, 601, 840, 997, 1027, 1128
TauI	GCSGC	1 cut(s)	720
TfiI	GAWTC	4 cut(s)	208, 335, 350, 988
Tru1I	TTAA	6 cut(s)	39, 318, 420, 515, 672, 1138
Tru9I	TTAA	6 cut(s)	39, 318, 420, 515, 672, 1138
TscAI	CASTG	3 cut(s)	544, 784, 899
TseFI	GTSAC	4 cut(s)	481, 733, 1013, 1043
TseI	GCWGC	2 cut(s)	56, 643
Tsp45I	GTSAC	4 cut(s)	481, 733, 1013, 1043
TspDTI	ATGAA	6 cut(s)	213, 348, 363, 387, 710, 1034
TspGWI	ACGGA	1 cut(s)	1062
TspRI	CASTG	3 cut(s)	544, 784, 899
Van91I	CCANNNNNTGG	2 cut(s)	243, 951
VpaK11BI	GGWCC	3 cut(s)	234, 361, 1049
VspI	ATTAAT	1 cut(s)	318
XapI	RAATTY	1 cut(s)	840
XcmI	CCANNNNNNNNNTGG	1 cut(s)	812
XhoI	CTCGAG	1 cut(s)	1071
XmnI	GAANNNNTTC	1 cut(s)	354
XspI	CTAG	5 cut(s)	326, 414, 561, 743, 858

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.