Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0000356

Physical Location & Seq

Genomic Coordinates Reverse (-)

20827301 .. 20828143

Gene Structure 843 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00398940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 843 bp

ATGAGTAATGTGCTAGTCAATGAATCTGCTCACCATGAATCGGTTCGGGACCTGAGCTTCTGTCGGACTAATTTGAAGTTTTGTTCATGTTCCGATGACACTACTGTTAAAATCTGGGATTTTGAACGGTGCCAACAGGAGAAGACATTGACCGGCCATGGTTGGAATGTCATGAGTGTTGACTGGCACCCCACAAACTCTCTGATAGCTTCGGGTGGGTGGGACAGTGCTGTCAAACTGTGGGATGCTAGGTCAGGAGAGAACTCTGTTCTTTTTATGATCACAAAAACTTGGGTGCATTCTGTCAAGTGGAACCGAAATGGTAACTGGCTGCTAACTGCTTCCAAGGATCAAGTCATTAAGCTTTACGACTTGAGGGCTATGAAGGAACTCAGATCATTCCGCGGCCATCGGAACAAAGTGACTGCTCTAGCTTGGCATCCTCTTACTGAAGATTATTTTGTCAGTGGGAGTAGTGATGGATCCATTTTCCATTGGCTTGTTGGGCATCATACTCCCCAGGTTGAAATTCCTAATGCACACACTAACAGTTACAATAATAATAGTGTGTGGGATCTCCAGTGGCATCCTATTGGTCATATGATTTGTAGTGGTAGCAATGATCGCACCACCAAGTTTTGGTGCAGAACAGGACATAAATCTAAAATCACTCAGAATCATCAAAGTATTGGTAATCAAAATTCCGCTTTTGCTTCTCACATGAACAGTAATGTTCCTTTTCCATTTCATGGACCACCAACTATTGCTGCTACTCGAGACCAAGGAACCATTGGTTCAGGAGGTGTTGGAACCATTATACCAGGTGTTGGAATTGCGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

WD40

Protein Analysis

280

Amino Acids

31.38

Weight (kDa)

8.54

Isoelectric Point (pI)

27.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WDR55	PF24796	5 - 128	2.5e-12	WDR55
WD40_Prp19	PF24814	6 - 88	5.8e-12	Prp19 WD40 domain
Beta-prop_TEP1_2nd	PF25047	7 - 145	7.4e-12	TEP-1 second beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	7 - 165	2e-13	WDR36/Utp21 second beta-propeller domain
WD40	PF00400	9 - 40	9.9e-06	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	9 - 108	9e-21	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	9 - 82	6.2e-13	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	9 - 87	3.2e-10	CDC20/Fizzy WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	10 - 70	3.1e-07	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	10 - 83	1.2e-09	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	11 - 88	3.7e-17	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	13 - 89	2.6e-11	WDHD1 first WD40 domain
EIF3I	PF24805	14 - 239	4.3e-13	EIF3I
WD40_Gbeta	PF25391	18 - 134	5.7e-19	G protein beta WD-40 repeat protein
Beta-prop_EML_2	PF23414	23 - 169	1.1e-19	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	26 - 113	5.8e-06	WDR90/POC16, second beta-propeller
Beta-prop_IFT140_1st	PF23383	34 - 120	9.2e-06	IFT140 first beta-propeller
Beta-prop_CAF1B_HIR1	PF24105	45 - 129	3.2e-10	CAF1B/HIR1 beta-propeller domain
WD40	PF00400	45 - 82	1.3e-10	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	49 - 166	4.8e-12	WDR3 second beta-propeller domain
Beta-prop_EML	PF23409	51 - 156	3e-07	Echinoderm microtubule-associated protein first beta-propeller
WDR55	PF24796	56 - 168	4.6e-11	WDR55
Beta-prop_WDR3_1st	PF25173	57 - 214	5.2e-23	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	75 - 222	5.3e-21	CDC20/Fizzy WD40 domain
Beta-prop_DCAF4	PF23761	94 - 152	7e-06	DDB1- and CUL4-associated factor 4 beta-propeller domain
Beta-prop_THOC3	PF25174	96 - 229	1.2e-22	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	98 - 232	2.6e-13	WDHD1 first WD40 domain
Beta-prop_WDR3_2nd	PF25172	99 - 218	2e-08	WDR3 second beta-propeller domain
WD40_Prp19	PF24814	99 - 218	7.2e-16	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	99 - 177	1.9e-13	WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	113 - 215	3.2e-06	WDR36/Utp21 first beta-propeller
WD40	PF00400	129 - 166	6.5e-06	WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1	PF24105	131 - 234	4.4e-06	CAF1B/HIR1 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000356)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13480 AT5G13480 AT5G13480 AT5G13480
fragaria_vesca	FvH4_4g16141 FvH4_5g25490 FvH4_5g25550 FvH4_6g22190 FvH4_6g23330 FvH4_7g02880
malus_domestica	MD02G1288700.v1.1 MD07G1038200.v1.1
prunus_persica	Prupe.2G034300_v2.0.a1
pyrus_communis	pycom02g24420 pycom07g02650
rosa_chinensis	RchiOBHm_Chr1g0323831 RchiOBHm_Chr3g0482821 RchiOBHm_Chr3g0482981 RchiOBHm_Chr3g0486211 RchiOBHm_Chr4g0404661 RchiOBHm_Chr5g0010661
rosa_laevigata	RLG00000012304 RLG00000017204 RLG00000017697 RLG00000020158 RLG00000030265 RLG00000031770 RLG00000035414
rosa_multiflora	Rmu_co8066382.1_g000001 Rmu_co8299121.1_g000001 Rmu_co8338957.1_g000001 Rmu_sc0001371.1_g000014 Rmu_sc0002634.1_g000006 Rmu_sc0004124.1_g000001 Rmu_sc0004540.1_g000008 Rmu_sc0006103.1_g000005 Rmu_sc0006571.1_g000003 Rmu_sc0006601.1_g000005 Rmu_sc0006601.1_g000008 Rmu_sc0006601.1_g000010 Rmu_sc0009883.1_g000005 Rmu_sc0011602.1_g000010 Rmu_sc0011602.1_g000011 Rmu_sc0012513.1_g000008 Rmu_sc0025336.1_g000001 Rmu_sc0026709.1_g000001 Rmu_ssc0000175.1_g000002 Rmu_ssc0000175.1_g000031
rosa_roxburghii	Rroxscaffold_1G00027770 Rroxscaffold_1G00065710 Rroxscaffold_3G00243370 Rroxscaffold_3G00243410 Rroxscaffold_3G00243440 Rroxscaffold_3G00243490 Rroxscaffold_4G00326390 Rroxscaffold_6G00398770 Rroxscaffold_6G00398910 Rroxscaffold_6G00398940
rosa_rugosa	Rorug01G0039800 Rorug01G0039900 Rorug03G0198000 Rorug03G0198100 Rorug03G0199200 Rorug04G0451600
rosa_samantha	Rh1AG057200 Rh1BG048200 Rh1CG058500 Rh1DG062300 Rh1DG062400 Rh2AG304100 Rh2CG002400 Rh2CG642500 Rh2DG328100 Rh3AG250000 Rh3BG285200 Rh3BG286000 Rh3CG284000 Rh3CG285400 Rh3CG307500 Rh3DG278700 Rh3DG279600 Rh3DG281000 Rh3DG303900 Rh4AG124300 Rh4BG118400 Rh4CG132400 Rh4CG132500 Rh4DG015900 Rh5AG083200 Rh5AG417500 Rh5AG538800 Rh5BG078500 Rh5BG447700 Rh5BG541600 Rh5BG541700 Rh5CG091200 Rh5CG564200 Rh5CG564300 Rh5DG078600 Rh5DG545800
rosa_wichuraiana	Rw0G000660 Rw0G022360 Rw1G004890 Rw3G022520 Rw3G022590 Rw3G022710 Rw3G024280

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	230
AccB1I	GGYRCC	2 cut(s)	129, 186
AccB7I	CCANNNNNTGG	3 cut(s)	639, 749, 827
AccII	CGCG	1 cut(s)	405
AciI	CCGC	4 cut(s)	403, 405, 705, 836
AclWI	GGATC	4 cut(s)	357, 477, 490, 582
AcoI	YGGCCR	2 cut(s)	154, 406
AcsI	RAATTY	2 cut(s)	528, 700
AcuI	CTGAAG	1 cut(s)	471
AfiI	CCNNNNNNNGG	4 cut(s)	40, 639, 749, 827
AgsI	TTSAA	3 cut(s)	76, 125, 527
AjnI	CCWGG	2 cut(s)	519, 820
AluBI	AGCT	4 cut(s)	57, 209, 364, 434
AluI	AGCT	4 cut(s)	57, 209, 364, 434
Alw26I	GTCTC	1 cut(s)	771
AlwI	GGATC	4 cut(s)	357, 477, 490, 582
Ama87I	CYCGRG	1 cut(s)	774
AoxI	GGCC	2 cut(s)	154, 406
ApeKI	GCWGC	2 cut(s)	331, 767
ApoI	RAATTY	2 cut(s)	528, 700
Asp700I	GAANNNNTTC	1 cut(s)	42
AspS9I	GGNCC	2 cut(s)	49, 752
AsuHPI	GGTGA	1 cut(s)	23
AvaI	CYCGRG	1 cut(s)	774
AvaII	GGWCC	2 cut(s)	49, 752
BamHI	GGATCC	1 cut(s)	482
BanI	GGYRCC	2 cut(s)	129, 186
BbsI	GAAGAC	1 cut(s)	149
BbvI	GCAGC	2 cut(s)	318, 754
BccI	CCATC	2 cut(s)	417, 473
BciT130I	CCWGG	2 cut(s)	521, 822
BclI	TGATCA	1 cut(s)	279
BcoDI	GTCTC	1 cut(s)	771
BfaI	CTAG	3 cut(s)	14, 249, 431
BisI	GCNGC	3 cut(s)	332, 406, 768
BlsI	GCNGC	3 cut(s)	333, 407, 769
Bme1390I	CCNGG	2 cut(s)	521, 822
Bme18I	GGWCC	2 cut(s)	49, 752
BmeT110I	CYCGRG	1 cut(s)	774
BmgT120I	GGNCC	2 cut(s)	49, 752
BmiI	GGNNCC	7 cut(s)	50, 131, 188, 314, 484, 787, 811
BmrFI	CCNGG	2 cut(s)	521, 822
BmsI	GCATC	4 cut(s)	235, 448, 517, 595
BpiI	GAAGAC	1 cut(s)	149
BpmI	CTGGAG	1 cut(s)	563
Bpu10I	CCTNAGC	1 cut(s)	53
BpuEI	CTTGAG	1 cut(s)	394
BsaI	GGTCTC	1 cut(s)	771
BsaJI	CCNNGG	5 cut(s)	157, 345, 403, 519, 781
Bsc4I	CCNNNNNNNGG	4 cut(s)	40, 639, 749, 827
Bse118I	RCCGGY	1 cut(s)	152
Bse1I	ACTGG	3 cut(s)	188, 332, 580
Bse3DI	GCAATG	1 cut(s)	625
BseBI	CCWGG	2 cut(s)	521, 822
BseDI	CCNNGG	5 cut(s)	157, 345, 403, 519, 781
BseGI	GGATG	3 cut(s)	250, 439, 586
BseLI	CCNNNNNNNGG	4 cut(s)	40, 639, 749, 827
BseMI	GCAATG	1 cut(s)	625
BseMII	CTCAG	3 cut(s)	44, 406, 686
BseNI	ACTGG	3 cut(s)	188, 332, 580
BseXI	GCAGC	2 cut(s)	318, 754
BsgI	GTGCAG	1 cut(s)	664
Bsh1236I	CGCG	1 cut(s)	405
BshFI	GGCC	2 cut(s)	156, 408
BshNI	GGYRCC	2 cut(s)	129, 186
BsiHKCI	CYCGRG	1 cut(s)	774
BsiSI	CCGG	1 cut(s)	153
BslFI	GGGAC	2 cut(s)	62, 236
BslI	CCNNNNNNNGG	4 cut(s)	40, 639, 749, 827
BsmAI	GTCTC	1 cut(s)	771
BsmFI	GGGAC	2 cut(s)	62, 236
BsmI	GAATGC	1 cut(s)	298
BsnI	GGCC	2 cut(s)	156, 408
Bso31I	GGTCTC	1 cut(s)	771
BsoBI	CYCGRG	1 cut(s)	774
Bsp143I	GATC	6 cut(s)	279, 349, 395, 482, 574, 622
Bsp19I	CCATGG	1 cut(s)	157
BspACI	CCGC	4 cut(s)	403, 405, 705, 836
BspANI	GGCC	2 cut(s)	156, 408
BspCNI	CTCAG	3 cut(s)	45, 405, 685
BspFNI	CGCG	1 cut(s)	405
BspHI	TCATGA	1 cut(s)	171
BspLI	GGNNCC	7 cut(s)	50, 131, 188, 314, 484, 787, 811
BspPI	GGATC	4 cut(s)	357, 477, 490, 582
BspT107I	GGYRCC	2 cut(s)	129, 186
BspTNI	GGTCTC	1 cut(s)	771
BsrDI	GCAATG	1 cut(s)	625
BsrFI	RCCGGY	1 cut(s)	152
BsrI	ACTGG	3 cut(s)	188, 332, 580
BssAI	RCCGGY	1 cut(s)	152
BssECI	CCNNGG	5 cut(s)	157, 345, 403, 519, 781
BssMI	GATC	6 cut(s)	279, 349, 395, 482, 574, 622
BssT1I	CCWWGG	3 cut(s)	157, 345, 781
Bst2UI	CCWGG	2 cut(s)	521, 822
Bst4CI	ACNGT	6 cut(s)	106, 129, 227, 240, 551, 728
BstDEI	CTNAG	3 cut(s)	53, 392, 672
BstDSI	CCRYGG	2 cut(s)	157, 403
BstF5I	GGATG	3 cut(s)	250, 439, 586
BstFNI	CGCG	1 cut(s)	405
BstKTI	GATC	6 cut(s)	282, 352, 398, 485, 577, 625
BstMAI	GTCTC	1 cut(s)	771
BstMBI	GATC	6 cut(s)	279, 349, 395, 482, 574, 622
BstMWI	GCNNNNNNNGC	2 cut(s)	505, 624
BstNI	CCWGG	2 cut(s)	521, 822
BstSCI	CCNGG	2 cut(s)	519, 820
BstUI	CGCG	1 cut(s)	405
BstV1I	GCAGC	2 cut(s)	318, 754
BstV2I	GAAGAC	1 cut(s)	149
BstX2I	RGATCY	2 cut(s)	482, 574
BstYI	RGATCY	2 cut(s)	482, 574
BsuRI	GGCC	2 cut(s)	156, 408
BtgI	CCRYGG	2 cut(s)	157, 403
BtsCI	GGATG	3 cut(s)	250, 439, 586
BtsIMutI	CAGTG	3 cut(s)	232, 472, 587
CciI	TCATGA	1 cut(s)	171
Cfr10I	RCCGGY	1 cut(s)	152
Cfr13I	GGNCC	2 cut(s)	49, 752
Cfr42I	CCGCGG	1 cut(s)	406
CsiI	ACCWGGT	1 cut(s)	820
CviAII	CATG	6 cut(s)	35, 87, 158, 172, 721, 749
CviJI	RGCY	9 cut(s)	57, 156, 209, 331, 364, 380, 408, 434, 499
CviKI_1	RGCY	9 cut(s)	57, 156, 209, 331, 364, 380, 408, 434, 499
DdeI	CTNAG	3 cut(s)	53, 392, 672
DpnI	GATC	6 cut(s)	281, 351, 397, 484, 576, 624
DpnII	GATC	6 cut(s)	279, 349, 395, 482, 574, 622
DrdI	GACNNNNNNGTC	1 cut(s)	230
DseDI	GACNNNNNNGTC	1 cut(s)	230
EaeI	YGGCCR	2 cut(s)	154, 406
Eco130I	CCWWGG	3 cut(s)	157, 345, 781
Eco31I	GGTCTC	1 cut(s)	771
Eco47I	GGWCC	2 cut(s)	49, 752
Eco57I	CTGAAG	1 cut(s)	471
Eco88I	CYCGRG	1 cut(s)	774
EcoO109I	RGGNCCY	1 cut(s)	49
EcoRII	CCWGG	2 cut(s)	519, 820
EcoT14I	CCWWGG	3 cut(s)	157, 345, 781
ErhI	CCWWGG	3 cut(s)	157, 345, 781
FaeI	CATG	6 cut(s)	38, 90, 161, 175, 724, 752
FaqI	GGGAC	2 cut(s)	62, 236
FatI	CATG	6 cut(s)	34, 86, 157, 171, 720, 748
FauNDI	CATATG	1 cut(s)	600
FbaI	TGATCA	1 cut(s)	279
Fnu4HI	GCNGC	3 cut(s)	332, 406, 768
FokI	GGATG	3 cut(s)	257, 426, 573
Fsp4HI	GCNGC	3 cut(s)	332, 406, 768
FspBI	CTAG	3 cut(s)	14, 249, 431
GluI	GCNGC	3 cut(s)	332, 406, 768
GsuI	CTGGAG	1 cut(s)	563
HaeIII	GGCC	2 cut(s)	156, 408
HapII	CCGG	1 cut(s)	153
Hin1II	CATG	6 cut(s)	38, 90, 161, 175, 724, 752
HincII	GTYRAC	1 cut(s)	181
HindII	GTYRAC	1 cut(s)	181
HindIII	AAGCTT	1 cut(s)	362
HinfI	GANTC	3 cut(s)	23, 38, 676
HpaII	CCGG	1 cut(s)	153
HphI	GGTGA	1 cut(s)	23
Hpy166II	GTNNAC	1 cut(s)	181
Hpy188I	TCNGA	6 cut(s)	66, 94, 204, 395, 414, 675
Hpy188III	TCNNGA	5 cut(s)	47, 172, 255, 776, 798
Hpy8I	GTNNAC	1 cut(s)	181
HpyAV	CCTTC	1 cut(s)	379
HpyCH4III	ACNGT	6 cut(s)	106, 129, 227, 240, 551, 728
HpyCH4V	TGCA	3 cut(s)	298, 539, 645
HpyF10VI	GCNNNNNNNGC	2 cut(s)	505, 624
HpyF3I	CTNAG	3 cut(s)	53, 392, 672
Hsp92II	CATG	6 cut(s)	38, 90, 161, 175, 724, 752
Ksp22I	TGATCA	1 cut(s)	279
KspI	CCGCGG	1 cut(s)	406
Kzo9I	GATC	6 cut(s)	279, 349, 395, 482, 574, 622
Lsp1109I	GCAGC	2 cut(s)	318, 754
LweI	GCATC	4 cut(s)	235, 448, 517, 595
MabI	ACCWGGT	1 cut(s)	820
MaeI	CTAG	3 cut(s)	14, 249, 431
MaeIII	GTNAC	3 cut(s)	323, 421, 551
MalI	GATC	6 cut(s)	281, 351, 397, 484, 576, 624
MboI	GATC	6 cut(s)	279, 349, 395, 482, 574, 622
MboII	GAAGA	2 cut(s)	154, 464
MflI	RGATCY	2 cut(s)	482, 574
MluCI	AATT	4 cut(s)	70, 528, 700, 831
MmeI	TCCRAC	4 cut(s)	44, 143, 787, 808
MnlI	CCTC	3 cut(s)	369, 453, 794
MroXI	GAANNNNTTC	1 cut(s)	42
MseI	TTAA	3 cut(s)	108, 360, 841
MspA1I	CMGCKG	1 cut(s)	405
MspI	CCGG	1 cut(s)	153
MspR9I	CCNGG	2 cut(s)	521, 822
Mva1269I	GAATGC	1 cut(s)	298
MvaI	CCWGG	2 cut(s)	521, 822
MvnI	CGCG	1 cut(s)	405
MwoI	GCNNNNNNNGC	2 cut(s)	505, 624
NcoI	CCATGG	1 cut(s)	157
NdeI	CATATG	1 cut(s)	600
NdeII	GATC	6 cut(s)	279, 349, 395, 482, 574, 622
NlaIII	CATG	6 cut(s)	38, 90, 161, 175, 724, 752
NlaIV	GGNNCC	7 cut(s)	50, 131, 188, 314, 484, 787, 811
NmuCI	GTSAC	1 cut(s)	421
PaeR7I	CTCGAG	1 cut(s)	774
PagI	TCATGA	1 cut(s)	171
PctI	GAATGC	1 cut(s)	298
PdmI	GAANNNNTTC	1 cut(s)	42
PfeI	GAWTC	3 cut(s)	23, 38, 676
PflMI	CCANNNNNTGG	3 cut(s)	639, 749, 827
PkrI	GCNGC	3 cut(s)	333, 407, 769
PpuMI	RGGWCCY	1 cut(s)	49
Psp5II	RGGWCCY	1 cut(s)	49
Psp6I	CCWGG	2 cut(s)	519, 820
PspGI	CCWGG	2 cut(s)	519, 820
PspN4I	GGNNCC	7 cut(s)	50, 131, 188, 314, 484, 787, 811
PspPI	GGNCC	2 cut(s)	49, 752
PspPPI	RGGWCCY	1 cut(s)	49
PsuI	RGATCY	2 cut(s)	482, 574
SacII	CCGCGG	1 cut(s)	406
SaqAI	TTAA	3 cut(s)	108, 360, 841
SatI	GCNGC	3 cut(s)	332, 406, 768
Sau3AI	GATC	6 cut(s)	279, 349, 395, 482, 574, 622
Sau96I	GGNCC	2 cut(s)	49, 752
ScrFI	CCNGG	2 cut(s)	521, 822
SetI	ASST	9 cut(s)	54, 59, 211, 254, 366, 436, 525, 805, 826
SexAI	ACCWGGT	1 cut(s)	820
SfaNI	GCATC	4 cut(s)	235, 448, 517, 595
Sfr274I	CTCGAG	1 cut(s)	774
Sfr303I	CCGCGG	1 cut(s)	406
SgrBI	CCGCGG	1 cut(s)	406
SinI	GGWCC	2 cut(s)	49, 752
SlaI	CTCGAG	1 cut(s)	774
SmlI	CTYRAG	2 cut(s)	373, 774
SmoI	CTYRAG	2 cut(s)	373, 774
Sse9I	AATT	4 cut(s)	70, 528, 700, 831
SsiI	CCGC	4 cut(s)	403, 405, 705, 836
SspMI	CTAG	3 cut(s)	14, 249, 431
StyD4I	CCNGG	2 cut(s)	519, 820
StyI	CCWWGG	3 cut(s)	157, 345, 781
TaaI	ACNGT	6 cut(s)	106, 129, 227, 240, 551, 728
TaqI	TCGA	1 cut(s)	775
TasI	AATT	4 cut(s)	70, 528, 700, 831
TauI	GCSGC	1 cut(s)	408
TfiI	GAWTC	3 cut(s)	23, 38, 676
Tru1I	TTAA	3 cut(s)	108, 360, 841
Tru9I	TTAA	3 cut(s)	108, 360, 841
TscAI	CASTG	3 cut(s)	232, 472, 587
TseFI	GTSAC	1 cut(s)	421
TseI	GCWGC	2 cut(s)	331, 767
Tsp45I	GTSAC	1 cut(s)	421
TspDTI	ATGAA	6 cut(s)	36, 51, 75, 398, 737, 737
TspRI	CASTG	3 cut(s)	232, 472, 587
Van91I	CCANNNNNTGG	3 cut(s)	639, 749, 827
VpaK11BI	GGWCC	2 cut(s)	49, 752
XapI	RAATTY	2 cut(s)	528, 700
XcmI	CCANNNNNNNNNTGG	2 cut(s)	500, 788
XhoI	CTCGAG	1 cut(s)	774
XmnI	GAANNNNTTC	1 cut(s)	42
XspI	CTAG	3 cut(s)	14, 249, 431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.