Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Terpene_synth | PF01397 | 30 - 204 | 4.7e-51 | Terpene synthase, N-terminal domain |
| Terpene_synth_C | PF03936 | 265 - 504 | 6e-98 | Terpene synthase family, metal binding domain |
| Terpene_syn_C_2 | PF19086 | 305 - 504 | 1.5e-56 | Terpene synthase family 2, C-terminal metal binding |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1014 |
| Acc36I | ACCTGC | 2 cut(s) | 148, 200 |
| AccII | CGCG | 1 cut(s) | 1232 |
| AciI | CCGC | 4 cut(s) | 64, 206, 396, 1539 |
| AclI | AACGTT | 1 cut(s) | 1635 |
| AclWI | GGATC | 1 cut(s) | 1664 |
| AcsI | RAATTY | 4 cut(s) | 39, 73, 902, 1335 |
| AcuI | CTGAAG | 1 cut(s) | 1011 |
| AcyI | GRCGYC | 1 cut(s) | 1011 |
| AfaI | GTAC | 4 cut(s) | 341, 964, 1125, 1619 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1210, 1244 |
| AflIII | ACRYGT | 1 cut(s) | 660 |
| AjnI | CCWGG | 1 cut(s) | 120 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1343, 1375 |
| AleI | CACNNNNGTG | 1 cut(s) | 1625 |
| AluBI | AGCT | 6 cut(s) | 477, 710, 769, 817, 1142, 1151 |
| AluI | AGCT | 6 cut(s) | 477, 710, 769, 817, 1142, 1151 |
| Alw21I | GWGCWC | 1 cut(s) | 771 |
| Alw26I | GTCTC | 4 cut(s) | 610, 1459, 1460, 1660 |
| AlwI | GGATC | 1 cut(s) | 1664 |
| Ama87I | CYCGRG | 1 cut(s) | 977 |
| AoxI | GGCC | 1 cut(s) | 142 |
| ApeKI | GCWGC | 3 cut(s) | 250, 590, 1063 |
| ApoI | RAATTY | 4 cut(s) | 39, 73, 902, 1335 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 996, 1524 |
| AsuHPI | GGTGA | 4 cut(s) | 344, 521, 532, 542 |
| AsuII | TTCGAA | 4 cut(s) | 276, 300, 876, 969 |
| AvaI | CYCGRG | 1 cut(s) | 977 |
| AxyI | CCTNAGG | 1 cut(s) | 892 |
| BanII | GRGCYC | 1 cut(s) | 771 |
| BauI | CACGAG | 1 cut(s) | 1563 |
| BbsI | GAAGAC | 3 cut(s) | 1200, 1293, 1471 |
| Bbv12I | GWGCWC | 1 cut(s) | 771 |
| BbvCI | CCTCAGC | 1 cut(s) | 45 |
| BbvI | GCAGC | 3 cut(s) | 262, 602, 1050 |
| BccI | CCATC | 6 cut(s) | 134, 323, 1090, 1176, 1363, 1640 |
| BceAI | ACGGC | 1 cut(s) | 477 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1525, 1537, 1559, 1571 |
| BciT130I | CCWGG | 1 cut(s) | 122 |
| BcoDI | GTCTC | 4 cut(s) | 610, 1459, 1460, 1660 |
| BfaI | CTAG | 6 cut(s) | 521, 587, 783, 800, 1386, 1422 |
| BfuAI | ACCTGC | 2 cut(s) | 148, 200 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 461 |
| BglII | AGATCT | 2 cut(s) | 777, 981 |
| BisI | GCNGC | 4 cut(s) | 207, 251, 591, 1064 |
| BlsI | GCNGC | 4 cut(s) | 208, 252, 592, 1065 |
| Bme1390I | CCNGG | 1 cut(s) | 122 |
| BmeT110I | CYCGRG | 1 cut(s) | 977 |
| BmiI | GGNNCC | 1 cut(s) | 1187 |
| BmrFI | CCNGG | 1 cut(s) | 122 |
| BmsI | GCATC | 7 cut(s) | 232, 412, 492, 517, 703, 943, 1539 |
| BpiI | GAAGAC | 3 cut(s) | 1200, 1293, 1471 |
| BpmI | CTGGAG | 1 cut(s) | 1644 |
| Bpu10I | CCTNAGC | 1 cut(s) | 45 |
| Bpu14I | TTCGAA | 4 cut(s) | 276, 300, 876, 969 |
| BpuEI | CTTGAG | 2 cut(s) | 575, 1137 |
| Bsa29I | ATCGAT | 1 cut(s) | 1668 |
| BsaBI | GATNNNNATC | 1 cut(s) | 738 |
| BsaHI | GRCGYC | 1 cut(s) | 1011 |
| BsaI | GGTCTC | 2 cut(s) | 1459, 1460 |
| BsaJI | CCNNGG | 5 cut(s) | 120, 924, 1105, 1173, 1299 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 101, 131, 1170, 1200, 1601, 1631 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1210, 1244 |
| Bse1I | ACTGG | 2 cut(s) | 1627, 1673 |
| Bse21I | CCTNAGG | 1 cut(s) | 892 |
| Bse3DI | GCAATG | 1 cut(s) | 252 |
| Bse8I | GATNNNNATC | 1 cut(s) | 738 |
| BseBI | CCWGG | 1 cut(s) | 122 |
| BseCI | ATCGAT | 1 cut(s) | 1668 |
| BseDI | CCNNGG | 5 cut(s) | 120, 924, 1105, 1173, 1299 |
| BseGI | GGATG | 9 cut(s) | 196, 392, 507, 580, 946, 1200, 1219, 1378, 1618 |
| BseJI | GATNNNNATC | 1 cut(s) | 738 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1210, 1244 |
| BseMI | GCAATG | 1 cut(s) | 252 |
| BseMII | CTCAG | 4 cut(s) | 59, 784, 906, 1470 |
| BseNI | ACTGG | 2 cut(s) | 1627, 1673 |
| BseXI | GCAGC | 3 cut(s) | 262, 602, 1050 |
| Bsh1236I | CGCG | 1 cut(s) | 1232 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1539 |
| BshFI | GGCC | 1 cut(s) | 144 |
| BshVI | ATCGAT | 1 cut(s) | 1668 |
| BsiEI | CGRYCG | 1 cut(s) | 1539 |
| BsiHKAI | GWGCWC | 1 cut(s) | 771 |
| BsiHKCI | CYCGRG | 1 cut(s) | 977 |
| BslFI | GGGAC | 1 cut(s) | 1022 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1210, 1244 |
| BsmAI | GTCTC | 4 cut(s) | 610, 1459, 1460, 1660 |
| BsmFI | GGGAC | 1 cut(s) | 1022 |
| BsmI | GAATGC | 1 cut(s) | 296 |
| BsnI | GGCC | 1 cut(s) | 144 |
| Bso31I | GGTCTC | 2 cut(s) | 1459, 1460 |
| BsoBI | CYCGRG | 1 cut(s) | 977 |
| Bsp119I | TTCGAA | 4 cut(s) | 276, 300, 876, 969 |
| Bsp1286I | GDGCHC | 1 cut(s) | 771 |
| Bsp143I | GATC | 5 cut(s) | 97, 777, 981, 1591, 1669 |
| Bsp68I | TCGCGA | 1 cut(s) | 1232 |
| BspACI | CCGC | 4 cut(s) | 64, 206, 396, 1539 |
| BspANI | GGCC | 1 cut(s) | 144 |
| BspCNI | CTCAG | 4 cut(s) | 58, 783, 905, 1469 |
| BspDI | ATCGAT | 1 cut(s) | 1668 |
| BspFNI | CGCG | 1 cut(s) | 1232 |
| BspHI | TCATGA | 2 cut(s) | 325, 697 |
| BspLI | GGNNCC | 1 cut(s) | 1187 |
| BspMI | ACCTGC | 2 cut(s) | 148, 200 |
| BspPI | GGATC | 1 cut(s) | 1664 |
| BspT104I | TTCGAA | 4 cut(s) | 276, 300, 876, 969 |
| BspTNI | GGTCTC | 2 cut(s) | 1459, 1460 |
| BsrDI | GCAATG | 1 cut(s) | 252 |
| BsrI | ACTGG | 2 cut(s) | 1627, 1673 |
| BssECI | CCNNGG | 5 cut(s) | 120, 924, 1105, 1173, 1299 |
| BssMI | GATC | 5 cut(s) | 97, 777, 981, 1591, 1669 |
| BssNI | GRCGYC | 1 cut(s) | 1011 |
| BssSI | CACGAG | 1 cut(s) | 1563 |
| BssT1I | CCWWGG | 3 cut(s) | 924, 1105, 1299 |
| Bst2BI | CACGAG | 1 cut(s) | 1563 |
| Bst2UI | CCWGG | 1 cut(s) | 122 |
| Bst4CI | ACNGT | 2 cut(s) | 862, 1683 |
| Bst6I | CTCTTC | 2 cut(s) | 1515, 1667 |
| BstACI | GRCGYC | 1 cut(s) | 1011 |
| BstBI | TTCGAA | 4 cut(s) | 276, 300, 876, 969 |
| BstC8I | GCNNGC | 3 cut(s) | 312, 606, 1061 |
| BstDEI | CTNAG | 8 cut(s) | 45, 368, 497, 610, 770, 892, 1340, 1456 |
| BstF5I | GGATG | 9 cut(s) | 196, 392, 507, 580, 946, 1200, 1219, 1378, 1618 |
| BstFNI | CGCG | 1 cut(s) | 1232 |
| BstKTI | GATC | 5 cut(s) | 100, 780, 984, 1594, 1672 |
| BstMAI | GTCTC | 4 cut(s) | 610, 1459, 1460, 1660 |
| BstMBI | GATC | 5 cut(s) | 97, 777, 981, 1591, 1669 |
| BstMCI | CGRYCG | 1 cut(s) | 1539 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 461, 1139, 1148 |
| BstNI | CCWGG | 1 cut(s) | 122 |
| BstNSI | RCATGY | 3 cut(s) | 314, 664, 1415 |
| BstSCI | CCNGG | 1 cut(s) | 120 |
| BstUI | CGCG | 1 cut(s) | 1232 |
| BstV1I | GCAGC | 3 cut(s) | 262, 602, 1050 |
| BstV2I | GAAGAC | 3 cut(s) | 1200, 1293, 1471 |
| BstX2I | RGATCY | 2 cut(s) | 777, 981 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 90 |
| BstYI | RGATCY | 2 cut(s) | 777, 981 |
| Bsu15I | ATCGAT | 1 cut(s) | 1668 |
| Bsu36I | CCTNAGG | 1 cut(s) | 892 |
| BsuRI | GGCC | 1 cut(s) | 144 |
| BsuTUI | ATCGAT | 1 cut(s) | 1668 |
| BtsCI | GGATG | 9 cut(s) | 196, 392, 507, 580, 946, 1200, 1219, 1378, 1618 |
| BtsI | GCAGTG | 1 cut(s) | 1084 |
| BtsIMutI | CAGTG | 5 cut(s) | 778, 1084, 1620, 1679, 1680 |
| BtuMI | TCGCGA | 1 cut(s) | 1232 |
| BveI | ACCTGC | 2 cut(s) | 148, 200 |
| Cac8I | GCNNGC | 3 cut(s) | 312, 606, 1061 |
| CciI | TCATGA | 2 cut(s) | 325, 697 |
| ClaI | ATCGAT | 1 cut(s) | 1668 |
| CseI | GACGC | 1 cut(s) | 242 |
| Csp6I | GTAC | 4 cut(s) | 340, 963, 1124, 1618 |
| CviQI | GTAC | 4 cut(s) | 340, 963, 1124, 1618 |
| DdeI | CTNAG | 8 cut(s) | 45, 368, 497, 610, 770, 892, 1340, 1456 |
| DpnI | GATC | 5 cut(s) | 99, 779, 983, 1593, 1671 |
| DpnII | GATC | 5 cut(s) | 97, 777, 981, 1591, 1669 |
| Eam1104I | CTCTTC | 2 cut(s) | 1515, 1667 |
| EarI | CTCTTC | 2 cut(s) | 1515, 1667 |
| EciI | GGCGGA | 1 cut(s) | 79 |
| Ecl136II | GAGCTC | 1 cut(s) | 769 |
| Eco130I | CCWWGG | 3 cut(s) | 924, 1105, 1299 |
| Eco24I | GRGCYC | 1 cut(s) | 771 |
| Eco31I | GGTCTC | 2 cut(s) | 1459, 1460 |
| Eco53kI | GAGCTC | 1 cut(s) | 769 |
| Eco57I | CTGAAG | 1 cut(s) | 1011 |
| Eco81I | CCTNAGG | 1 cut(s) | 892 |
| Eco88I | CYCGRG | 1 cut(s) | 977 |
| EcoICRI | GAGCTC | 1 cut(s) | 769 |
| EcoRII | CCWGG | 1 cut(s) | 120 |
| EcoT14I | CCWWGG | 3 cut(s) | 924, 1105, 1299 |
| EcoT22I | ATGCAT | 3 cut(s) | 312, 507, 958 |
| EcoT38I | GRGCYC | 1 cut(s) | 771 |
| ErhI | CCWWGG | 3 cut(s) | 924, 1105, 1299 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1512, 1544 |
| FaqI | GGGAC | 1 cut(s) | 1022 |
| FauNDI | CATATG | 3 cut(s) | 306, 319, 958 |
| Fnu4HI | GCNGC | 4 cut(s) | 207, 251, 591, 1064 |
| FokI | GGATG | 9 cut(s) | 203, 379, 514, 567, 953, 1187, 1226, 1385, 1625 |
| FriOI | GRGCYC | 1 cut(s) | 771 |
| Fsp4HI | GCNGC | 4 cut(s) | 207, 251, 591, 1064 |
| FspBI | CTAG | 6 cut(s) | 521, 587, 783, 800, 1386, 1422 |
| GluI | GCNGC | 4 cut(s) | 207, 251, 591, 1064 |
| GsuI | CTGGAG | 1 cut(s) | 1644 |
| HaeIII | GGCC | 1 cut(s) | 144 |
| HgaI | GACGC | 1 cut(s) | 242 |
| Hin1I | GRCGYC | 1 cut(s) | 1011 |
| HincII | GTYRAC | 1 cut(s) | 163 |
| HindII | GTYRAC | 1 cut(s) | 163 |
| HindIII | AAGCTT | 1 cut(s) | 475 |
| HinfI | GANTC | 2 cut(s) | 557, 1499 |
| HphI | GGTGA | 4 cut(s) | 344, 521, 532, 542 |
| Hpy166II | GTNNAC | 3 cut(s) | 163, 1102, 1620 |
| Hpy188I | TCNGA | 6 cut(s) | 11, 200, 626, 866, 1280, 1459 |
| Hpy188III | TCNNGA | 6 cut(s) | 184, 326, 635, 698, 979, 1231 |
| Hpy8I | GTNNAC | 3 cut(s) | 163, 1102, 1620 |
| HpyAV | CCTTC | 3 cut(s) | 437, 1248, 1501 |
| HpyCH4III | ACNGT | 2 cut(s) | 862, 1683 |
| HpyCH4IV | ACGT | 2 cut(s) | 1011, 1635 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 461, 1139, 1148 |
| HpyF3I | CTNAG | 8 cut(s) | 45, 368, 497, 610, 770, 892, 1340, 1456 |
| HpySE526I | ACGT | 2 cut(s) | 1011, 1635 |
| Hsp92I | GRCGYC | 1 cut(s) | 1011 |
| Kzo9I | GATC | 5 cut(s) | 97, 777, 981, 1591, 1669 |
| LmnI | GCTCC | 3 cut(s) | 766, 814, 1191 |
| Lsp1109I | GCAGC | 3 cut(s) | 262, 602, 1050 |
| LweI | GCATC | 7 cut(s) | 232, 412, 492, 517, 703, 943, 1539 |
| MaeI | CTAG | 6 cut(s) | 521, 587, 783, 800, 1386, 1422 |
| MaeII | ACGT | 2 cut(s) | 1011, 1635 |
| MaeIII | GTNAC | 4 cut(s) | 431, 565, 656, 1294 |
| MalI | GATC | 5 cut(s) | 99, 779, 983, 1593, 1671 |
| MboI | GATC | 5 cut(s) | 97, 777, 981, 1591, 1669 |
| MboII | GAAGA | 9 cut(s) | 524, 536, 983, 1057, 1205, 1298, 1471, 1532, 1654 |
| MfeI | CAATTG | 2 cut(s) | 237, 1015 |
| MflI | RGATCY | 2 cut(s) | 777, 981 |
| MhlI | GDGCHC | 1 cut(s) | 771 |
| MlyI | GAGTC | 1 cut(s) | 566 |
| MmeI | TCCRAC | 4 cut(s) | 844, 1225, 1258, 1374 |
| MnlI | CCTC | 8 cut(s) | 54, 127, 180, 901, 1081, 1168, 1297, 1603 |
| Mph1103I | ATGCAT | 3 cut(s) | 312, 507, 958 |
| MroXI | GAANNNNTTC | 2 cut(s) | 996, 1524 |
| MseI | TTAA | 6 cut(s) | 108, 449, 473, 1311, 1530, 1572 |
| MslI | CAYNNNNRTG | 4 cut(s) | 309, 330, 1312, 1625 |
| MspA1I | CMGCKG | 1 cut(s) | 1541 |
| MspR9I | CCNGG | 1 cut(s) | 122 |
| MunI | CAATTG | 2 cut(s) | 237, 1015 |
| Mva1269I | GAATGC | 1 cut(s) | 296 |
| MvaI | CCWGG | 1 cut(s) | 122 |
| MvnI | CGCG | 1 cut(s) | 1232 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 461, 1139, 1148 |
| NdeI | CATATG | 3 cut(s) | 306, 319, 958 |
| NdeII | GATC | 5 cut(s) | 97, 777, 981, 1591, 1669 |
| NlaIV | GGNNCC | 1 cut(s) | 1187 |
| NmeAIII | GCCGAG | 1 cut(s) | 1198 |
| NmuCI | GTSAC | 1 cut(s) | 1294 |
| NruI | TCGCGA | 1 cut(s) | 1232 |
| NsiI | ATGCAT | 3 cut(s) | 312, 507, 958 |
| NspI | RCATGY | 3 cut(s) | 314, 664, 1415 |
| NspV | TTCGAA | 4 cut(s) | 276, 300, 876, 969 |
| OliI | CACNNNNGTG | 1 cut(s) | 1625 |
| PaeI | GCATGC | 1 cut(s) | 314 |
| PaeR7I | CTCGAG | 1 cut(s) | 977 |
| PagI | TCATGA | 2 cut(s) | 325, 697 |
| PciI | ACATGT | 1 cut(s) | 660 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 975 |
| PctI | GAATGC | 1 cut(s) | 296 |
| PdmI | GAANNNNTTC | 2 cut(s) | 996, 1524 |
| PfeI | GAWTC | 1 cut(s) | 1499 |
| PkrI | GCNGC | 4 cut(s) | 208, 252, 592, 1065 |
| PleI | GAGTC | 1 cut(s) | 565 |
| PpsI | GAGTC | 1 cut(s) | 565 |
| PscI | ACATGT | 1 cut(s) | 660 |
| Psp124BI | GAGCTC | 1 cut(s) | 771 |
| Psp1406I | AACGTT | 1 cut(s) | 1635 |
| Psp6I | CCWGG | 1 cut(s) | 120 |
| PspGI | CCWGG | 1 cut(s) | 120 |
| PspN4I | GGNNCC | 1 cut(s) | 1187 |
| PsuI | RGATCY | 2 cut(s) | 777, 981 |
| RruI | TCGCGA | 1 cut(s) | 1232 |
| RsaI | GTAC | 4 cut(s) | 341, 964, 1125, 1619 |
| RsaNI | GTAC | 4 cut(s) | 340, 963, 1124, 1618 |
| RseI | CAYNNNNRTG | 4 cut(s) | 309, 330, 1312, 1625 |
| SacI | GAGCTC | 1 cut(s) | 771 |
| SaqAI | TTAA | 6 cut(s) | 108, 449, 473, 1311, 1530, 1572 |
| SatI | GCNGC | 4 cut(s) | 207, 251, 591, 1064 |
| Sau3AI | GATC | 5 cut(s) | 97, 777, 981, 1591, 1669 |
| SchI | GAGTC | 1 cut(s) | 566 |
| ScrFI | CCNGG | 1 cut(s) | 122 |
| SduI | GDGCHC | 1 cut(s) | 771 |
| SfaNI | GCATC | 7 cut(s) | 232, 412, 492, 517, 703, 943, 1539 |
| Sfr274I | CTCGAG | 1 cut(s) | 977 |
| SfuI | TTCGAA | 4 cut(s) | 276, 300, 876, 969 |
| SlaI | CTCGAG | 1 cut(s) | 977 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 309, 330, 1312, 1625 |
| SmlI | CTYRAG | 3 cut(s) | 554, 977, 1152 |
| SmoI | CTYRAG | 3 cut(s) | 554, 977, 1152 |
| SphI | GCATGC | 1 cut(s) | 314 |
| SsiI | CCGC | 4 cut(s) | 64, 206, 396, 1539 |
| SspMI | CTAG | 6 cut(s) | 521, 587, 783, 800, 1386, 1422 |
| SstI | GAGCTC | 1 cut(s) | 771 |
| StyD4I | CCNGG | 1 cut(s) | 120 |
| StyI | CCWWGG | 3 cut(s) | 924, 1105, 1299 |
| TaaI | ACNGT | 2 cut(s) | 862, 1683 |
| TaiI | ACGT | 2 cut(s) | 1014, 1638 |
| TaqI | TCGA | 7 cut(s) | 276, 300, 876, 969, 978, 1262, 1668 |
| TatI | WGTACW | 2 cut(s) | 1123, 1617 |
| TauI | GCSGC | 1 cut(s) | 209 |
| TfiI | GAWTC | 1 cut(s) | 1499 |
| Tru1I | TTAA | 6 cut(s) | 108, 449, 473, 1311, 1530, 1572 |
| Tru9I | TTAA | 6 cut(s) | 108, 449, 473, 1311, 1530, 1572 |
| TscAI | CASTG | 5 cut(s) | 778, 1084, 1627, 1680, 1686 |
| TseFI | GTSAC | 1 cut(s) | 1294 |
| TseI | GCWGC | 3 cut(s) | 250, 590, 1063 |
| Tsp45I | GTSAC | 1 cut(s) | 1294 |
| TspRI | CASTG | 5 cut(s) | 778, 1084, 1627, 1680, 1686 |
| XapI | RAATTY | 4 cut(s) | 39, 73, 902, 1335 |
| XceI | RCATGY | 3 cut(s) | 314, 664, 1415 |
| XhoI | CTCGAG | 1 cut(s) | 977 |
| XmnI | GAANNNNTTC | 2 cut(s) | 996, 1524 |
| XspI | CTAG | 6 cut(s) | 521, 587, 783, 800, 1386, 1422 |
| ZraI | GACGTC | 1 cut(s) | 1012 |
| Zsp2I | ATGCAT | 3 cut(s) | 312, 507, 958 |