RLG00000035496

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
67691513 .. 67691926
414 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035496

Sequence Viewer

Length: 315 bp
ATGGCTCTTGCCACAATTGACCCTTCCTCCGATACGGGTTTGGATATGACTTTGGATCCTTATAAGTTGGGTGAAGGTGGTACAGCAAATAGCGGGATCGATCCTTGGAAGTGGAGAGGGTTTCTACCCTCTAATGTTCGCTTGGGCAATGGCACACAAATTTGGTTGTCGAGCCCAGAACACCGCTGTCAACGAGGAATGGTCGCGGAGAATCTGCTGTGGCTCGACAAATTCCGTCTGGGGCGTTTTGGCCTTGTTGATTTTGGAGATGAGGGCAGCGATCTGCTGATGGTGAAGGACGGTGGTCTAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

105

Amino Acids

11.35

Weight (kDa)

4.75

Isoelectric Point (pI)

17.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 63
AccII CGCG 1 cut(s) 206
AciI CCGC 3 cut(s) 93, 184, 206
AclWI GGATC 4 cut(s) 50, 63, 95, 104
AcsI RAATTY 2 cut(s) 159, 230
AfaI GTAC 1 cut(s) 82
AluBI AGCT 1 cut(s) 311
AluI AGCT 1 cut(s) 311
AlwI GGATC 4 cut(s) 50, 63, 95, 104
AoxI GGCC 1 cut(s) 250
ApeKI GCWGC 1 cut(s) 276
ApoI RAATTY 2 cut(s) 159, 230
AsuHPI GGTGA 2 cut(s) 83, 304
BamHI GGATCC 1 cut(s) 55
BanII GRGCYC 1 cut(s) 176
BbvI GCAGC 1 cut(s) 288
BccI CCATC 1 cut(s) 283
BfaI CTAG 1 cut(s) 308
BisI GCNGC 1 cut(s) 277
BlsI GCNGC 1 cut(s) 278
BmiI GGNNCC 1 cut(s) 57
BoxI GACNNNNGTC 1 cut(s) 303
Bsa29I ATCGAT 1 cut(s) 99
BsaJI CCNNGG 1 cut(s) 104
BsaXI ACNNNNNCTCC 2 cut(s) 11, 41
Bse3DI GCAATG 1 cut(s) 154
BseCI ATCGAT 1 cut(s) 99
BseDI CCNNGG 1 cut(s) 104
BseMI GCAATG 1 cut(s) 154
BseXI GCAGC 1 cut(s) 288
Bsh1236I CGCG 1 cut(s) 206
BshFI GGCC 1 cut(s) 252
BshVI ATCGAT 1 cut(s) 99
BsnI GGCC 1 cut(s) 252
Bsp1286I GDGCHC 1 cut(s) 176
Bsp143I GATC 4 cut(s) 55, 96, 100, 280
BspACI CCGC 3 cut(s) 93, 184, 206
BspANI GGCC 1 cut(s) 252
BspDI ATCGAT 1 cut(s) 99
BspFNI CGCG 1 cut(s) 206
BspLI GGNNCC 1 cut(s) 57
BspPI GGATC 4 cut(s) 50, 63, 95, 104
BsrDI GCAATG 1 cut(s) 154
BssECI CCNNGG 1 cut(s) 104
BssMI GATC 4 cut(s) 55, 96, 100, 280
BssT1I CCWWGG 1 cut(s) 104
Bst4CI ACNGT 1 cut(s) 302
BstFNI CGCG 1 cut(s) 206
BstKTI GATC 4 cut(s) 58, 99, 103, 283
BstMBI GATC 4 cut(s) 55, 96, 100, 280
BstPAI GACNNNNGTC 1 cut(s) 303
BstUI CGCG 1 cut(s) 206
BstV1I GCAGC 1 cut(s) 288
BstX2I RGATCY 1 cut(s) 55
BstYI RGATCY 1 cut(s) 55
Bsu15I ATCGAT 1 cut(s) 99
BsuRI GGCC 1 cut(s) 252
BsuTUI ATCGAT 1 cut(s) 99
ClaI ATCGAT 1 cut(s) 99
Csp6I GTAC 1 cut(s) 81
CviJI RGCY 5 cut(s) 5, 174, 223, 252, 311
CviKI_1 RGCY 5 cut(s) 5, 174, 223, 252, 311
CviQI GTAC 1 cut(s) 81
DpnI GATC 4 cut(s) 57, 98, 102, 282
DpnII GATC 4 cut(s) 55, 96, 100, 280
Eco130I CCWWGG 1 cut(s) 104
Eco24I GRGCYC 1 cut(s) 176
EcoT14I CCWWGG 1 cut(s) 104
EcoT38I GRGCYC 1 cut(s) 176
ErhI CCWWGG 1 cut(s) 104
FaiI YATR 2 cut(s) 47, 63
FauI CCCGC 1 cut(s) 86
Fnu4HI GCNGC 1 cut(s) 277
FriOI GRGCYC 1 cut(s) 176
Fsp4HI GCNGC 1 cut(s) 277
FspBI CTAG 1 cut(s) 308
GluI GCNGC 1 cut(s) 277
HaeIII GGCC 1 cut(s) 252
HincII GTYRAC 1 cut(s) 191
HindII GTYRAC 1 cut(s) 191
HinfI GANTC 1 cut(s) 211
HphI GGTGA 2 cut(s) 83, 304
Hpy166II GTNNAC 1 cut(s) 191
Hpy188I TCNGA 1 cut(s) 31
Hpy8I GTNNAC 1 cut(s) 191
HpyAV CCTTC 3 cut(s) 33, 68, 289
HpyCH4III ACNGT 1 cut(s) 302
Kzo9I GATC 4 cut(s) 55, 96, 100, 280
LpnPI CCDG 2 cut(s) 189, 224
Lsp1109I GCAGC 1 cut(s) 288
MaeI CTAG 1 cut(s) 308
MalI GATC 4 cut(s) 57, 98, 102, 282
MboI GATC 4 cut(s) 55, 96, 100, 280
MfeI CAATTG 1 cut(s) 15
MflI RGATCY 1 cut(s) 55
MhlI GDGCHC 1 cut(s) 176
MluCI AATT 3 cut(s) 15, 159, 230
MnlI CCTC 5 cut(s) 37, 110, 139, 188, 265
MspA1I CMGCKG 1 cut(s) 186
MunI CAATTG 1 cut(s) 15
MvnI CGCG 1 cut(s) 206
NdeII GATC 4 cut(s) 55, 96, 100, 280
NlaIV GGNNCC 1 cut(s) 57
PfeI GAWTC 1 cut(s) 211
PkrI GCNGC 1 cut(s) 278
PshAI GACNNNNGTC 1 cut(s) 303
PsiI TTATAA 1 cut(s) 63
PspN4I GGNNCC 1 cut(s) 57
PsuI RGATCY 1 cut(s) 55
RsaI GTAC 1 cut(s) 82
RsaNI GTAC 1 cut(s) 81
SatI GCNGC 1 cut(s) 277
Sau3AI GATC 4 cut(s) 55, 96, 100, 280
SduI GDGCHC 1 cut(s) 176
SetI ASST 2 cut(s) 79, 313
Sse9I AATT 3 cut(s) 15, 159, 230
SsiI CCGC 3 cut(s) 93, 184, 206
SspMI CTAG 1 cut(s) 308
StyI CCWWGG 1 cut(s) 104
TaaI ACNGT 1 cut(s) 302
TaqI TCGA 3 cut(s) 99, 170, 225
TasI AATT 3 cut(s) 15, 159, 230
TfiI GAWTC 1 cut(s) 211
TseI GCWGC 1 cut(s) 276
TspGWI ACGGA 1 cut(s) 224
XapI RAATTY 2 cut(s) 159, 230
XspI CTAG 1 cut(s) 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.