AKAP7 2'5' RNA ligase-like domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| KH_1 | PF00013 | 92 - 131 | 7.9e-07 | KH domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 2 cut(s) | 135, 183 |
| AflIII | ACRYGT | 1 cut(s) | 38 |
| AgsI | TTSAA | 4 cut(s) | 123, 189, 347, 439 |
| AjnI | CCWGG | 1 cut(s) | 16 |
| AluBI | AGCT | 2 cut(s) | 82, 329 |
| AluI | AGCT | 2 cut(s) | 82, 329 |
| Alw21I | GWGCWC | 2 cut(s) | 99, 130 |
| Alw26I | GTCTC | 1 cut(s) | 347 |
| Alw44I | GTGCAC | 1 cut(s) | 95 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 161 |
| ApaLI | GTGCAC | 1 cut(s) | 95 |
| ApeKI | GCWGC | 2 cut(s) | 478, 481 |
| BaeGI | GKGCMC | 1 cut(s) | 99 |
| Bbv12I | GWGCWC | 2 cut(s) | 99, 130 |
| BbvI | GCAGC | 2 cut(s) | 490, 493 |
| BccI | CCATC | 1 cut(s) | 139 |
| BciT130I | CCWGG | 1 cut(s) | 18 |
| BcoDI | GTCTC | 1 cut(s) | 347 |
| BfaI | CTAG | 1 cut(s) | 83 |
| BisI | GCNGC | 2 cut(s) | 479, 482 |
| BlsI | GCNGC | 2 cut(s) | 480, 483 |
| Bme1390I | CCNGG | 1 cut(s) | 18 |
| BmrFI | CCNGG | 1 cut(s) | 18 |
| BmsI | GCATC | 1 cut(s) | 203 |
| BpuEI | CTTGAG | 1 cut(s) | 114 |
| BsaBI | GATNNNNATC | 1 cut(s) | 371 |
| BsaJI | CCNNGG | 1 cut(s) | 16 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 234, 264 |
| Bse8I | GATNNNNATC | 1 cut(s) | 371 |
| BseBI | CCWGG | 1 cut(s) | 18 |
| BseDI | CCNNGG | 1 cut(s) | 16 |
| BseJI | GATNNNNATC | 1 cut(s) | 371 |
| BseMII | CTCAG | 2 cut(s) | 72, 347 |
| BseRI | GAGGAG | 3 cut(s) | 255, 339, 423 |
| BseSI | GKGCMC | 1 cut(s) | 99 |
| BseXI | GCAGC | 2 cut(s) | 490, 493 |
| BsiHKAI | GWGCWC | 2 cut(s) | 99, 130 |
| BsmAI | GTCTC | 1 cut(s) | 347 |
| BsmI | GAATGC | 2 cut(s) | 59, 268 |
| Bsp1286I | GDGCHC | 2 cut(s) | 99, 130 |
| BspCNI | CTCAG | 2 cut(s) | 71, 346 |
| BspQI | GCTCTTC | 1 cut(s) | 468 |
| BssECI | CCNNGG | 1 cut(s) | 16 |
| Bst2UI | CCWGG | 1 cut(s) | 18 |
| Bst6I | CTCTTC | 2 cut(s) | 419, 468 |
| BstDEI | CTNAG | 3 cut(s) | 58, 171, 333 |
| BstMAI | GTCTC | 1 cut(s) | 347 |
| BstNI | CCWGG | 1 cut(s) | 18 |
| BstNSI | RCATGY | 1 cut(s) | 42 |
| BstSCI | CCNGG | 1 cut(s) | 16 |
| BstSLI | GKGCMC | 1 cut(s) | 99 |
| BstV1I | GCAGC | 2 cut(s) | 490, 493 |
| BtgZI | GCGATG | 1 cut(s) | 180 |
| BtsI | GCAGTG | 1 cut(s) | 255 |
| BtsIMutI | CAGTG | 1 cut(s) | 255 |
| CaiI | CAGNNNCTG | 1 cut(s) | 161 |
| CviAII | CATG | 1 cut(s) | 39 |
| CviJI | RGCY | 4 cut(s) | 82, 149, 293, 329 |
| CviKI_1 | RGCY | 4 cut(s) | 82, 149, 293, 329 |
| DdeI | CTNAG | 3 cut(s) | 58, 171, 333 |
| Eam1104I | CTCTTC | 2 cut(s) | 419, 468 |
| EarI | CTCTTC | 2 cut(s) | 419, 468 |
| Eco57I | CTGAAG | 2 cut(s) | 135, 183 |
| EcoRII | CCWGG | 1 cut(s) | 16 |
| FaeI | CATG | 1 cut(s) | 42 |
| FaiI | YATR | 4 cut(s) | 40, 140, 498, 500 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 237, 269 |
| FatI | CATG | 1 cut(s) | 38 |
| Fnu4HI | GCNGC | 2 cut(s) | 479, 482 |
| Fsp4HI | GCNGC | 2 cut(s) | 479, 482 |
| FspBI | CTAG | 1 cut(s) | 83 |
| GluI | GCNGC | 2 cut(s) | 479, 482 |
| Hin1II | CATG | 1 cut(s) | 42 |
| HinfI | GANTC | 2 cut(s) | 372, 395 |
| Hpy166II | GTNNAC | 3 cut(s) | 97, 177, 469 |
| Hpy188I | TCNGA | 4 cut(s) | 30, 52, 314, 336 |
| Hpy188III | TCNNGA | 2 cut(s) | 131, 470 |
| Hpy8I | GTNNAC | 3 cut(s) | 97, 177, 469 |
| HpyAV | CCTTC | 3 cut(s) | 433, 449, 484 |
| HpyCH4V | TGCA | 3 cut(s) | 97, 194, 211 |
| HpyF3I | CTNAG | 3 cut(s) | 58, 171, 333 |
| Hsp92II | CATG | 1 cut(s) | 42 |
| LguI | GCTCTTC | 1 cut(s) | 468 |
| LmnI | GCTCC | 2 cut(s) | 326, 410 |
| LpnPI | CCDG | 3 cut(s) | 3, 30, 342 |
| Lsp1109I | GCAGC | 2 cut(s) | 490, 493 |
| LweI | GCATC | 1 cut(s) | 203 |
| MaeI | CTAG | 1 cut(s) | 83 |
| MaeIII | GTNAC | 3 cut(s) | 8, 34, 157 |
| MhlI | GDGCHC | 2 cut(s) | 99, 130 |
| MnlI | CCTC | 8 cut(s) | 233, 277, 308, 317, 381, 385, 401, 457 |
| MseI | TTAA | 2 cut(s) | 257, 402 |
| MslI | CAYNNNNRTG | 1 cut(s) | 143 |
| MspR9I | CCNGG | 1 cut(s) | 18 |
| Mva1269I | GAATGC | 2 cut(s) | 59, 268 |
| MvaI | CCWGG | 1 cut(s) | 18 |
| NlaIII | CATG | 1 cut(s) | 42 |
| NspI | RCATGY | 1 cut(s) | 42 |
| PciI | ACATGT | 1 cut(s) | 38 |
| PciSI | GCTCTTC | 1 cut(s) | 468 |
| PctI | GAATGC | 2 cut(s) | 59, 268 |
| PfeI | GAWTC | 2 cut(s) | 372, 395 |
| PkrI | GCNGC | 2 cut(s) | 480, 483 |
| PscI | ACATGT | 1 cut(s) | 38 |
| Psp6I | CCWGG | 1 cut(s) | 16 |
| PspGI | CCWGG | 1 cut(s) | 16 |
| PstNI | CAGNNNCTG | 1 cut(s) | 161 |
| RseI | CAYNNNNRTG | 1 cut(s) | 143 |
| SapI | GCTCTTC | 1 cut(s) | 468 |
| SaqAI | TTAA | 2 cut(s) | 257, 402 |
| SatI | GCNGC | 2 cut(s) | 479, 482 |
| ScrFI | CCNGG | 1 cut(s) | 18 |
| SduI | GDGCHC | 2 cut(s) | 99, 130 |
| SetI | ASST | 6 cut(s) | 22, 84, 288, 331, 460, 468 |
| SfaNI | GCATC | 1 cut(s) | 203 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 143 |
| SmlI | CTYRAG | 1 cut(s) | 129 |
| SmoI | CTYRAG | 1 cut(s) | 129 |
| SspMI | CTAG | 1 cut(s) | 83 |
| StyD4I | CCNGG | 1 cut(s) | 16 |
| TfiI | GAWTC | 2 cut(s) | 372, 395 |
| Tru1I | TTAA | 2 cut(s) | 257, 402 |
| Tru9I | TTAA | 2 cut(s) | 257, 402 |
| TscAI | CASTG | 1 cut(s) | 255 |
| TseI | GCWGC | 2 cut(s) | 478, 481 |
| TspDTI | ATGAA | 2 cut(s) | 234, 243 |
| TspRI | CASTG | 1 cut(s) | 255 |
| VneI | GTGCAC | 1 cut(s) | 95 |
| XceI | RCATGY | 1 cut(s) | 42 |
| XspI | CTAG | 1 cut(s) | 83 |