Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006103.1

Orthogroup ID

OG0000356

Physical Location & Seq

Genomic Coordinates Forward (+)

18353 .. 19564

Gene Structure 1212 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1212 bp

ctgtcgtgcaatacacagactcgaaagcggcagcgtgatgcaagggatacaacagtgttgcaacctacaccagcagcatcaatcaattcgttgccgccggttgcgtattcggataacccatctaggagctttgctgcaaagtttgtgcatgcttgtacaaattacagagcccgtacttgtccgattaatcgggttttgtggacaccttccgggaggcgtctcattacagggtcccaaaatggggagttcactctttgggatggtcagtcatttaactatgaattgagttttctggctcatgatcaagcagtcaggtctatggcgtggagttatgatggtgagaattggatttctggtgatgatgggggatcaataaagtattggacgagtaacatgaacaatgtgctagtcaatgaatctgctcaccgagaatcggttcgggacttgagcttttgtaggactaatttgaagttctgttcatgttcggatgatacttatgtgaaaatctgggattatgaaaggtgccaagaagagttcagattgactggccatggttggaatgtgaagagtgttgactggcaccctacaaagtccttactagcttcaggtgggaaagacagtgttgtcaaactgtgggatgctaggacagggagagagctttgttcatttcatgatcacaaaaattgggtgcaatctgttaagtggagccgaaatggtaactggctgctaactgcttccaaggatcaagtcattaagctttacgacatgagggctatgaaggaacttgaatcattccacgggcatcggaatgaagtgactgctatagcttggcatccttttcatgaagaatattttgtcagtgggagtagtgatggatccattttccattggcttgttgggcatgaaactccccaggttgaagttcctaatgcacacagtaacaatcataataacagtgtgtgggatctccaatggcatcctattggtcatatgctttgcagtggtagcaatgatcgcacaacaaagttttggtgcagaaataggccaggagataaatgtaacatcagtcagaatcaaagtattggtgatcgaagttctgcttttgctggtcacatgactggtaactttccatttccattacatgaaggacaaccaaaaattgctactcgaaaccaaggagccattattccaggtgttggatttgcaatttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

WD40

Protein Analysis

403

Amino Acids

45.8

Weight (kDa)

8.28

Isoelectric Point (pI)

35.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_TEP1_2nd	PF25047	46 - 173	3.7e-07	TEP-1 second beta-propeller
Beta-prop_WDR5	PF25175	53 - 176	2.6e-16	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	53 - 230	5.3e-29	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	54 - 222	5.8e-24	CDC20/Fizzy WD40 domain
WD40_Gbeta	PF25391	56 - 272	3.5e-20	G protein beta WD-40 repeat protein
Beta-prop_IFT140_1st	PF23383	57 - 146	2e-08	IFT140 first beta-propeller
Beta-prop_WDR3_1st	PF25173	59 - 173	1.7e-17	WDR3 first beta-propeller domain
Beta-prop_EIPR1	PF23609	63 - 212	1.2e-06	EIPR1 beta-propeller
WD40_WDHD1_1st	PF24817	64 - 221	6.4e-16	WDHD1 first WD40 domain
WD40_Prp19	PF24814	70 - 264	2.7e-31	Prp19 WD40 domain
Beta-prop_WDR3_2nd	PF25172	90 - 213	1.2e-13	WDR3 second beta-propeller domain
EIF3I	PF24805	96 - 175	2.6e-07	EIF3I
Beta-prop_CAF1B_HIR1	PF24105	99 - 208	2.9e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5	PF25175	125 - 234	3.5e-20	WDR5 beta-propeller domain
WDR55	PF24796	132 - 298	1.7e-17	WDR55
Beta-prop_WDR36-Utp21_2nd	PF25168	137 - 297	1.4e-17	WDR36/Utp21 second beta-propeller domain
Beta-prop_EML_2	PF23414	154 - 298	4.7e-22	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	158 - 246	2.9e-08	WDR90/POC16, second beta-propeller
Beta-prop_TEP1_2nd	PF25047	160 - 276	5.4e-13	TEP-1 second beta-propeller
Beta-prop_SCAP	PF24017	160 - 255	3.2e-06	SCAP Beta-propeller
Beta-prop_WDR3_1st	PF25173	169 - 297	7.6e-28	WDR3 first beta-propeller domain
WD40	PF00400	179 - 213	1.1e-08	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	180 - 300	6.7e-13	WDR3 second beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	181 - 262	1.9e-11	CAF1B/HIR1 beta-propeller domain
Beta-prop_EML	PF23409	182 - 287	3.2e-09	Echinoderm microtubule-associated protein first beta-propeller
EIF3I	PF24805	182 - 343	3.8e-14	EIF3I
Beta-prop_IFT140_1st	PF23383	184 - 252	8.6e-07	IFT140 first beta-propeller
Beta-prop_Aladin	PF25460	187 - 296	1.1e-07	Aladin seven-bladed propeller
WD40_MABP1-WDR62_2nd	PF24782	188 - 344	1.2e-09	MABP1/WDR62 second WD40 domain
Beta-prop_WDR19_1st	PF23389	191 - 341	1.5e-07	WDR19 first beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	204 - 345	3e-10	WDR36/Utp21 first beta-propeller
Beta-prop_EIPR1	PF23609	215 - 344	1.4e-07	EIPR1 beta-propeller
WD40_CDC20-Fz	PF24807	218 - 348	8.4e-22	CDC20/Fizzy WD40 domain
WD40	PF00400	218 - 255	4.4e-08	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	224 - 346	1.2e-19	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	226 - 344	2e-21	THOC3 beta-propeller domain
Beta-prop_DCAF4	PF23761	226 - 286	9.9e-06	DDB1- and CUL4-associated factor 4 beta-propeller domain
WD40_WDHD1_1st	PF24817	230 - 348	4.6e-13	WDHD1 first WD40 domain
Beta-prop_WDR90_POC16_2nd	PF23393	242 - 337	6e-07	WDR90/POC16, second beta-propeller
WD40	PF00400	260 - 297	6e-06	WD domain, G-beta repeat
WD40_Prp19	PF24814	261 - 344	7.1e-10	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000356)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13480 AT5G13480 AT5G13480 AT5G13480
fragaria_vesca	FvH4_4g16141 FvH4_5g25490 FvH4_5g25550 FvH4_6g22190 FvH4_6g23330 FvH4_7g02880
malus_domestica	MD02G1288700.v1.1 MD07G1038200.v1.1
prunus_persica	Prupe.2G034300_v2.0.a1
pyrus_communis	pycom02g24420 pycom07g02650
rosa_chinensis	RchiOBHm_Chr1g0323831 RchiOBHm_Chr3g0482821 RchiOBHm_Chr3g0482981 RchiOBHm_Chr3g0486211 RchiOBHm_Chr4g0404661 RchiOBHm_Chr5g0010661
rosa_laevigata	RLG00000012304 RLG00000017204 RLG00000017697 RLG00000020158 RLG00000030265 RLG00000031770 RLG00000035414
rosa_multiflora	Rmu_co8066382.1_g000001 Rmu_co8299121.1_g000001 Rmu_co8338957.1_g000001 Rmu_sc0001371.1_g000014 Rmu_sc0002634.1_g000006 Rmu_sc0004124.1_g000001 Rmu_sc0004540.1_g000008 Rmu_sc0006103.1_g000005 Rmu_sc0006571.1_g000003 Rmu_sc0006601.1_g000005 Rmu_sc0006601.1_g000008 Rmu_sc0006601.1_g000010 Rmu_sc0009883.1_g000005 Rmu_sc0011602.1_g000010 Rmu_sc0011602.1_g000011 Rmu_sc0012513.1_g000008 Rmu_sc0025336.1_g000001 Rmu_sc0026709.1_g000001 Rmu_ssc0000175.1_g000002 Rmu_ssc0000175.1_g000031
rosa_roxburghii	Rroxscaffold_1G00027770 Rroxscaffold_1G00065710 Rroxscaffold_3G00243370 Rroxscaffold_3G00243410 Rroxscaffold_3G00243440 Rroxscaffold_3G00243490 Rroxscaffold_4G00326390 Rroxscaffold_6G00398770 Rroxscaffold_6G00398910 Rroxscaffold_6G00398940
rosa_rugosa	Rorug01G0039800 Rorug01G0039900 Rorug03G0198000 Rorug03G0198100 Rorug03G0199200 Rorug04G0451600
rosa_samantha	Rh1AG057200 Rh1BG048200 Rh1CG058500 Rh1DG062300 Rh1DG062400 Rh2AG304100 Rh2CG002400 Rh2CG642500 Rh2DG328100 Rh3AG250000 Rh3BG285200 Rh3BG286000 Rh3CG284000 Rh3CG285400 Rh3CG307500 Rh3DG278700 Rh3DG279600 Rh3DG281000 Rh3DG303900 Rh4AG124300 Rh4BG118400 Rh4CG132400 Rh4CG132500 Rh4DG015900 Rh5AG083200 Rh5AG417500 Rh5AG538800 Rh5BG078500 Rh5BG447700 Rh5BG541600 Rh5BG541700 Rh5CG091200 Rh5CG564200 Rh5CG564300 Rh5DG078600 Rh5DG545800
rosa_wichuraiana	Rw0G000660 Rw0G022360 Rw1G004890 Rw3G022520 Rw3G022590 Rw3G022710 Rw3G024280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	623
AccB1I	GGYRCC	2 cut(s)	522, 579
AccB7I	CCANNNNNTGG	1 cut(s)	1196
AciI	CCGC	2 cut(s)	28, 95
AclWI	GGATC	5 cut(s)	376, 750, 870, 883, 972
AcoI	YGGCCR	1 cut(s)	547
AcuI	CTGAAG	1 cut(s)	588
AcyI	GRCGYC	1 cut(s)	217
AfaI	GTAC	2 cut(s)	157, 175
AfiI	CCNNNNNNNGG	4 cut(s)	240, 241, 433, 1196
AgsI	TTSAA	3 cut(s)	469, 788, 920
AjnI	CCWGG	3 cut(s)	912, 1045, 1189
AluBI	AGCT	6 cut(s)	129, 450, 602, 658, 757, 827
AluI	AGCT	6 cut(s)	129, 450, 602, 658, 757, 827
Alw26I	GTCTC	1 cut(s)	224
AlwI	GGATC	5 cut(s)	376, 750, 870, 883, 972
AoxI	GGCC	2 cut(s)	547, 1043
ApeKI	GCWGC	4 cut(s)	31, 74, 134, 724
AseI	ATTAAT	1 cut(s)	186
Asp700I	GAANNNNTTC	1 cut(s)	435
AspS9I	GGNCC	1 cut(s)	231
AsuC2I	CCSGG	1 cut(s)	211
AsuHPI	GGTGA	4 cut(s)	350, 368, 416, 1097
AvaII	GGWCC	1 cut(s)	231
BaeI	ACNNNNGTAYC	4 cut(s)	39, 72, 483, 516
BalI	TGGCCA	1 cut(s)	549
BamHI	GGATCC	1 cut(s)	875
BanI	GGYRCC	2 cut(s)	522, 579
BanII	GRGCYC	1 cut(s)	172
BbvI	GCAGC	4 cut(s)	43, 86, 121, 711
BccI	CCATC	5 cut(s)	127, 254, 329, 356, 866
BciT130I	CCWGG	3 cut(s)	914, 1047, 1191
BciVI	GTATCC	1 cut(s)	40
BclI	TGATCA	2 cut(s)	301, 673
BcnI	CCSGG	1 cut(s)	211
BcoDI	GTCTC	1 cut(s)	224
BfaI	CTAG	4 cut(s)	123, 407, 599, 642
BfmI	CTRYAG	1 cut(s)	822
BfuI	GTATCC	1 cut(s)	40
BisI	GCNGC	6 cut(s)	29, 32, 75, 95, 135, 725
BlsI	GCNGC	6 cut(s)	30, 33, 76, 96, 136, 726
Bme1390I	CCNGG	4 cut(s)	211, 914, 1047, 1191
Bme18I	GGWCC	1 cut(s)	231
BmgT120I	GGNCC	1 cut(s)	231
BmiI	GGNNCC	7 cut(s)	232, 233, 524, 581, 707, 877, 1180
BmrFI	CCNGG	4 cut(s)	211, 914, 1047, 1191
BmsI	GCATC	6 cut(s)	28, 86, 628, 811, 841, 985
BpuEI	CTTGAG	1 cut(s)	466
BpuMI	CCSGG	1 cut(s)	211
BsaHI	GRCGYC	1 cut(s)	217
BsaJI	CCNNGG	5 cut(s)	550, 738, 796, 912, 1174
Bsc4I	CCNNNNNNNGG	4 cut(s)	240, 241, 433, 1196
Bse118I	RCCGGY	1 cut(s)	97
Bse1I	ACTGG	4 cut(s)	550, 581, 725, 1123
Bse3DI	GCAATG	1 cut(s)	1015
BseBI	CCWGG	3 cut(s)	914, 1047, 1191
BseDI	CCNNGG	5 cut(s)	550, 738, 796, 912, 1174
BseGI	GGATG	5 cut(s)	265, 493, 643, 832, 976
BseLI	CCNNNNNNNGG	4 cut(s)	240, 241, 433, 1196
BseMI	GCAATG	1 cut(s)	1015
BseNI	ACTGG	4 cut(s)	550, 581, 725, 1123
BseXI	GCAGC	4 cut(s)	43, 86, 121, 711
BsgI	GTGCAG	1 cut(s)	1054
BshFI	GGCC	2 cut(s)	549, 1045
BshNI	GGYRCC	2 cut(s)	522, 579
BsiSI	CCGG	2 cut(s)	98, 210
BslFI	GGGAC	2 cut(s)	217, 455
BslI	CCNNNNNNNGG	4 cut(s)	240, 241, 433, 1196
BsmAI	GTCTC	1 cut(s)	224
BsmBI	CGTCTC	1 cut(s)	224
BsmFI	GGGAC	2 cut(s)	217, 455
BsnI	GGCC	2 cut(s)	549, 1045
Bsp1286I	GDGCHC	1 cut(s)	172
Bsp1407I	TGTACA	1 cut(s)	155
Bsp143I	GATC	8 cut(s)	301, 368, 673, 742, 875, 964, 1012, 1087
Bsp19I	CCATGG	1 cut(s)	550
BspACI	CCGC	2 cut(s)	28, 95
BspANI	GGCC	2 cut(s)	549, 1045
BspHI	TCATGA	3 cut(s)	298, 670, 841
BspLI	GGNNCC	7 cut(s)	232, 233, 524, 581, 707, 877, 1180
BspPI	GGATC	5 cut(s)	376, 750, 870, 883, 972
BspT107I	GGYRCC	2 cut(s)	522, 579
BsrDI	GCAATG	1 cut(s)	1015
BsrFI	RCCGGY	1 cut(s)	97
BsrGI	TGTACA	1 cut(s)	155
BsrI	ACTGG	4 cut(s)	550, 581, 725, 1123
BssAI	RCCGGY	1 cut(s)	97
BssECI	CCNNGG	5 cut(s)	550, 738, 796, 912, 1174
BssMI	GATC	8 cut(s)	301, 368, 673, 742, 875, 964, 1012, 1087
BssNI	GRCGYC	1 cut(s)	217
BssT1I	CCWWGG	3 cut(s)	550, 738, 1174
Bst2UI	CCWGG	3 cut(s)	914, 1047, 1191
Bst4CI	ACNGT	5 cut(s)	55, 620, 633, 938, 956
Bst6I	CTCTTC	2 cut(s)	525, 560
BstACI	GRCGYC	1 cut(s)	217
BstAUI	TGTACA	1 cut(s)	155
BstC8I	GCNNGC	1 cut(s)	150
BstDSI	CCRYGG	2 cut(s)	550, 796
BstF5I	GGATG	5 cut(s)	265, 493, 643, 832, 976
BstKTI	GATC	8 cut(s)	304, 371, 676, 745, 878, 967, 1015, 1090
BstMAI	GTCTC	1 cut(s)	224
BstMBI	GATC	8 cut(s)	301, 368, 673, 742, 875, 964, 1012, 1087
BstMWI	GCNNNNNNNGC	3 cut(s)	898, 1005, 1014
BstNI	CCWGG	3 cut(s)	914, 1047, 1191
BstNSI	RCATGY	1 cut(s)	152
BstSCI	CCNGG	4 cut(s)	209, 912, 1045, 1189
BstSFI	CTRYAG	1 cut(s)	822
BstV1I	GCAGC	4 cut(s)	43, 86, 121, 711
BstX2I	RGATCY	2 cut(s)	875, 964
BstYI	RGATCY	2 cut(s)	875, 964
BsuI	GTATCC	1 cut(s)	40
BsuRI	GGCC	2 cut(s)	549, 1045
BtgI	CCRYGG	2 cut(s)	550, 796
BtsCI	GGATG	5 cut(s)	265, 493, 643, 832, 976
BtsI	GCAGTG	1 cut(s)	1006
BtsIMutI	CAGTG	5 cut(s)	60, 625, 865, 961, 1006
Cac8I	GCNNGC	1 cut(s)	150
CciI	TCATGA	3 cut(s)	298, 670, 841
Cfr10I	RCCGGY	1 cut(s)	97
Cfr13I	GGNCC	1 cut(s)	231
CseI	GACGC	1 cut(s)	206
Csp6I	GTAC	2 cut(s)	156, 174
CviQI	GTAC	2 cut(s)	156, 174
DpnI	GATC	8 cut(s)	303, 370, 675, 744, 877, 966, 1014, 1089
DpnII	GATC	8 cut(s)	301, 368, 673, 742, 875, 964, 1012, 1087
DrdI	GACNNNNNNGTC	1 cut(s)	623
DseDI	GACNNNNNNGTC	1 cut(s)	623
EaeI	YGGCCR	1 cut(s)	547
Eam1104I	CTCTTC	2 cut(s)	525, 560
EarI	CTCTTC	2 cut(s)	525, 560
Eco130I	CCWWGG	3 cut(s)	550, 738, 1174
Eco24I	GRGCYC	1 cut(s)	172
Eco47I	GGWCC	1 cut(s)	231
Eco57I	CTGAAG	1 cut(s)	588
EcoO109I	RGGNCCY	1 cut(s)	231
EcoRII	CCWGG	3 cut(s)	912, 1045, 1189
EcoT14I	CCWWGG	3 cut(s)	550, 738, 1174
EcoT38I	GRGCYC	1 cut(s)	172
ErhI	CCWWGG	3 cut(s)	550, 738, 1174
Esp3I	CGTCTC	1 cut(s)	224
FalI	AAGNNNNNCTT	2 cut(s)	1084, 1116
FaqI	GGGAC	2 cut(s)	217, 455
FauNDI	CATATG	1 cut(s)	990
FbaI	TGATCA	2 cut(s)	301, 673
Fnu4HI	GCNGC	6 cut(s)	29, 32, 75, 95, 135, 725
FokI	GGATG	5 cut(s)	272, 500, 650, 819, 963
FriOI	GRGCYC	1 cut(s)	172
Fsp4HI	GCNGC	6 cut(s)	29, 32, 75, 95, 135, 725
FspBI	CTAG	4 cut(s)	123, 407, 599, 642
GluI	GCNGC	6 cut(s)	29, 32, 75, 95, 135, 725
HaeIII	GGCC	2 cut(s)	549, 1045
HapII	CCGG	2 cut(s)	98, 210
HgaI	GACGC	1 cut(s)	206
Hin1I	GRCGYC	1 cut(s)	217
HincII	GTYRAC	1 cut(s)	574
HindII	GTYRAC	1 cut(s)	574
HindIII	AAGCTT	1 cut(s)	755
HinfI	GANTC	5 cut(s)	19, 416, 431, 788, 1072
HpaII	CCGG	2 cut(s)	98, 210
HphI	GGTGA	4 cut(s)	350, 368, 416, 1097
Hpy166II	GTNNAC	3 cut(s)	201, 249, 574
Hpy188I	TCNGA	6 cut(s)	112, 183, 487, 539, 807, 1071
Hpy188III	TCNNGA	4 cut(s)	299, 440, 671, 842
Hpy8I	GTNNAC	3 cut(s)	201, 249, 574
HpyAV	CCTTC	3 cut(s)	216, 772, 1139
HpyCH4III	ACNGT	5 cut(s)	55, 620, 633, 938, 956
HpyF10VI	GCNNNNNNNGC	3 cut(s)	898, 1005, 1014
Hsp92I	GRCGYC	1 cut(s)	217
KflI	GGGWCCC	1 cut(s)	231
Ksp22I	TGATCA	2 cut(s)	301, 673
Kzo9I	GATC	8 cut(s)	301, 368, 673, 742, 875, 964, 1012, 1087
LmnI	GCTCC	3 cut(s)	126, 705, 1178
Lsp1109I	GCAGC	4 cut(s)	43, 86, 121, 711
LweI	GCATC	6 cut(s)	28, 86, 628, 811, 841, 985
MaeI	CTAG	4 cut(s)	123, 407, 599, 642
MaeIII	GTNAC	7 cut(s)	389, 716, 814, 938, 1058, 1109, 1121
MalI	GATC	8 cut(s)	303, 370, 675, 744, 877, 966, 1014, 1089
MboI	GATC	8 cut(s)	301, 368, 673, 742, 875, 964, 1012, 1087
MboII	GAAGA	3 cut(s)	542, 577, 857
MflI	RGATCY	2 cut(s)	875, 964
MhlI	GDGCHC	1 cut(s)	172
MlsI	TGGCCA	1 cut(s)	549
MluCI	AATT	8 cut(s)	85, 160, 281, 343, 463, 682, 1158, 1206
MluNI	TGGCCA	1 cut(s)	549
MlyI	GAGTC	1 cut(s)	13
MmeI	TCCRAC	2 cut(s)	536, 1177
MnlI	CCTC	2 cut(s)	207, 762
Mox20I	TGGCCA	1 cut(s)	549
MroXI	GAANNNNTTC	1 cut(s)	435
MscI	TGGCCA	1 cut(s)	549
MseI	TTAA	5 cut(s)	186, 273, 699, 753, 1210
MslI	CAYNNNNRTG	1 cut(s)	807
Msp20I	TGGCCA	1 cut(s)	549
MspI	CCGG	2 cut(s)	98, 210
MspR9I	CCNGG	4 cut(s)	211, 914, 1047, 1191
MvaI	CCWGG	3 cut(s)	914, 1047, 1191
MwoI	GCNNNNNNNGC	3 cut(s)	898, 1005, 1014
NciI	CCSGG	1 cut(s)	211
NcoI	CCATGG	1 cut(s)	550
NdeI	CATATG	1 cut(s)	990
NdeII	GATC	8 cut(s)	301, 368, 673, 742, 875, 964, 1012, 1087
NlaIV	GGNNCC	7 cut(s)	232, 233, 524, 581, 707, 877, 1180
NmuCI	GTSAC	2 cut(s)	814, 1109
NspI	RCATGY	1 cut(s)	152
PaeI	GCATGC	1 cut(s)	152
PagI	TCATGA	3 cut(s)	298, 670, 841
PdmI	GAANNNNTTC	1 cut(s)	435
PfeI	GAWTC	4 cut(s)	416, 431, 788, 1072
PflMI	CCANNNNNTGG	1 cut(s)	1196
PfoI	TCCNGGA	1 cut(s)	209
PkrI	GCNGC	6 cut(s)	30, 33, 76, 96, 136, 726
PleI	GAGTC	1 cut(s)	13
PpsI	GAGTC	1 cut(s)	13
PpuMI	RGGWCCY	1 cut(s)	231
PshBI	ATTAAT	1 cut(s)	186
Psp5II	RGGWCCY	1 cut(s)	231
Psp6I	CCWGG	3 cut(s)	912, 1045, 1189
PspGI	CCWGG	3 cut(s)	912, 1045, 1189
PspN4I	GGNNCC	7 cut(s)	232, 233, 524, 581, 707, 877, 1180
PspPI	GGNCC	1 cut(s)	231
PspPPI	RGGWCCY	1 cut(s)	231
PsuI	RGATCY	2 cut(s)	875, 964
RsaI	GTAC	2 cut(s)	157, 175
RsaNI	GTAC	2 cut(s)	156, 174
RseI	CAYNNNNRTG	1 cut(s)	807
SaqAI	TTAA	5 cut(s)	186, 273, 699, 753, 1210
SatI	GCNGC	6 cut(s)	29, 32, 75, 95, 135, 725
Sau3AI	GATC	8 cut(s)	301, 368, 673, 742, 875, 964, 1012, 1087
Sau96I	GGNCC	1 cut(s)	231
SchI	GAGTC	1 cut(s)	13
ScrFI	CCNGG	4 cut(s)	211, 914, 1047, 1191
SduI	GDGCHC	1 cut(s)	172
SfaNI	GCATC	6 cut(s)	28, 86, 628, 811, 841, 985
SfcI	CTRYAG	1 cut(s)	822
SinI	GGWCC	1 cut(s)	231
SmiMI	CAYNNNNRTG	1 cut(s)	807
SmlI	CTYRAG	1 cut(s)	445
SmoI	CTYRAG	1 cut(s)	445
SphI	GCATGC	1 cut(s)	152
Sse9I	AATT	8 cut(s)	85, 160, 281, 343, 463, 682, 1158, 1206
SsiI	CCGC	2 cut(s)	28, 95
SspI	AATATT	1 cut(s)	851
SspMI	CTAG	4 cut(s)	123, 407, 599, 642
StyD4I	CCNGG	4 cut(s)	209, 912, 1045, 1189
StyI	CCWWGG	3 cut(s)	550, 738, 1174
TaaI	ACNGT	5 cut(s)	55, 620, 633, 938, 956
TaqI	TCGA	3 cut(s)	22, 1090, 1168
TasI	AATT	8 cut(s)	85, 160, 281, 343, 463, 682, 1158, 1206
TatI	WGTACW	1 cut(s)	155
TauI	GCSGC	2 cut(s)	31, 97
TfiI	GAWTC	4 cut(s)	416, 431, 788, 1072
Tru1I	TTAA	5 cut(s)	186, 273, 699, 753, 1210
Tru9I	TTAA	5 cut(s)	186, 273, 699, 753, 1210
TscAI	CASTG	5 cut(s)	60, 625, 865, 961, 1006
TseFI	GTSAC	2 cut(s)	814, 1109
TseI	GCWGC	4 cut(s)	31, 74, 134, 724
Tsp45I	GTSAC	2 cut(s)	814, 1109
TspRI	CASTG	5 cut(s)	60, 625, 865, 961, 1006
Van91I	CCANNNNNTGG	1 cut(s)	1196
VpaK11BI	GGWCC	1 cut(s)	231
VspI	ATTAAT	1 cut(s)	186
XceI	RCATGY	1 cut(s)	152
XcmI	CCANNNNNNNNNTGG	1 cut(s)	893
XmnI	GAANNNNTTC	1 cut(s)	435
XspI	CTAG	4 cut(s)	123, 407, 599, 642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.